┌─ Escherichia coli (6-333/342) APEC O1 (6)  
                                                             ┌┴─ Escherichia coli (6-333/342) M605 (1)  
                                                            ┌┴─ Escherichia coli (6-333/342) ED1a (4)  
                                                           ┌┴─ Escherichia coli (6-333/342) 83972 (5)  
                                                          ┌┴┬─ Escherichia coli (6-333/342) 536 (4)  
                                                         ┌┤ └─ Escherichia coli (6-333/342) E110019 (1)  
                                                        ┌┤└─ fig|1040638.4.peg.3669 O104:H4 (6-333/342) str. LB226692 (53)  
                                                        │└┬─ Escherichia coli (6-333/342) 1125A (12)  
                                                        │ └┬─ Escherichia coli (6-333/342) MS 21-1   
                                                        │  └┬─ Escherichia coli (6-333/342) 101-1 (5)  
                                                       ┌┤   └┬─ Escherichia coli (5-316/325) 1827-70   
                                                       ││    └┬─ Escherichia coli (6-333/342) MS 115-1   
                                                      ┌┤│     └─ Escherichia coli (6-333/342) K12 (20)  
                                                      ││└─ Escherichia coli (5-316/325) FVEC1412 (1)  
              ┌───────────────────────────────────────┤└─ Escherichia coli (6-333/342) B354 (2)  
      ┌───────┤                                       └─ Escherichia coli (6-333/342) M718   
┌─────┤       └───────────────────────── Escherichia coli (10-321/344) 83972 (13)  
│     └───────────────────────────────────────────────────────┬── Escherichia coli (1-311/336) M718 (3)  
│                                                             └─────┬─ Escherichia coli (1-331/336) E24377A (1)  
│                                                                   └─ Escherichia coli (1-331/336) SMS-3-5   
│                                                                     ┌─ Escherichia coli F11 (2)  
│                                                                    ┌┴─ Escherichia coli 536 (1)  
│                                                                   ┌┴─ Escherichia coli M718   
│                                                                  ┌┴─ Escherichia coli B7A (1)  
│                                                                 ┌┴─ Escherichia coli MS 196-1   
│                                                                ┌┴─ fig|1040638.4.peg.970 O104:H4 str. LB226692 (9)  
│                                                               ┌┴─ Escherichia coli K12 (19)  
│                                                              ┌┴┬─ Escherichia coli MS 145-7   
│                                                              │ └┬─ Escherichia coli ED1a (2)  
│                                     ┌────────────────────────┤  └┬─ Escherichia coli APEC O1 (5)  
│                                     │                        │   └─ Escherichia coli 83972 (9)  
│                         ┌───────────┤                        └─ Escherichia coli MS 124-1 (1)  
│                         │           │               ┌─ Escherichia coli 101-1 (7)  
┤                         │           └───────────────┤┌─ Escherichia coli M718   
│                         │                           └┤┌─ Escherichia coli 042 (53)  
│                         │                            └┤┌─ Escherichia coli APEC O1 (6)  
│                         │                             └┤┌─ Escherichia coli MS 185-1   
│     ┌───────────────────┤                              └┤┌─ Escherichia coli MS 21-1   
│     │                   │                               └┤ ┌─ Escherichia coli 1044A (41)  
│     │                   │                                └┬┴─ fig|1040638.4.peg.2021 O104:H4 str. LB226692 (13)  
│     │                   │                                 └┬─ Escherichia coli str. K-12 substr. DH10B   
│     │                   │                                  └─ Escherichia coli O157:H7 EDL933 (1)  
│┌────┤                   └─────────────┬────────────────────── Escherichia coli (12-322/339) H299 (1)  
││    │                                 └─────────────────────┬─ Escherichia coli (12-337/343) TA271   
││    │                                                       └┬─ fig|1040638.4.peg.666 O104:H4 (12-337/343) str. LB226692 (6)  
││    │                                                        └┬─ Escherichia coli (12-337/343) 83972 (7)  
││    │                                                         └─ Escherichia coli (12-337/343) ETEC H10407 (3)  
││    └─────┬───────────────────────────────────────────────── Escherichia coli (3-317/331) M718   
││          └─────────────────────────┬──────────────────────────── Escherichia coli (5-313/358) TA206   
││                                    └───────────────┬─ Escherichia coli (1-315/356) MS 116-1   
└┤                                                    └─ Escherichia coli (1-315/356) H736   
 │   ┌──────────────────────────────────── Escherichia coli (6-330/343) MS 107-1 (2)  
 │   │                                           ┌─ Escherichia coli (2-314/346) 53638 (1)  
 │   │                                          ┌┴─ Escherichia coli (2-310/346) B7A (6)  
 │   │                                         ┌┴─ Escherichia coli (4-312/348) 042 (42)  
 │   │                                        ┌┴┬─ Escherichia coli (2-310/346) K12 (12)  
 │   │                                       ┌┤ └─ Escherichia coli (2-310/346) B171 (4)  
 │   │                                       │└┬─ Escherichia coli (2-310/346) 101-1   
 └───┤                                      ┌┤ └─ fig|1040638.4.peg.3225 O104:H4 (2-310/346) str. LB226692 (3)  
     │                                      │└┬─ Escherichia coli (2-310/346) NC101   
     │                                     ┌┤ └┬─ Escherichia coli (4-312/348) E2348/69   
     │                                     ││  └─ Escherichia coli (2-310/346) 2362-75 (25)  
     │   ┌─────────────────────────────────┤└─ Escherichia coli (2-310/346) B185   
     │   │                                 └─ Escherichia coli (2-310/346) 1044A (25)  
     │   │                                   ┌─ Escherichia coli (3-321/341) ABU 83972 (3)  
     └───┤                                  ┌┴─ Escherichia coli (3-321/341) 2362-75 (13)  
         │                                 ┌┴─ Escherichia coli (3-321/341) K12 (75)  
         │        ┌────────────────────────┴─ Escherichia coli (3-321/341) E24377A (1)  
         │        │                                       ┌───────── Escherichia coli (4-324/336) O157:H7 str. EC4024   
         └────────┤                                       │   ┌─ Escherichia coli (4-322/332) 1044A (24)  
                  │                                       │  ┌┴─ Escherichia coli (4-322/332) O55:H7 str. CB9615   
                  └───────────────────────────────────────┤  │    ┌─ Escherichia coli (4-322/332) SE15   
                                                          │  │   ┌┴─ Escherichia coli (4-322/332) M605   
                                                          │  │  ┌┴┬─ Escherichia coli (4-322/332) NC101   
                                                          └──┤ ┌┤ └─ Escherichia coli (4-322/332) 2362-75 (14)  
                                                             │ │└─ Escherichia coli (4-322/332) ED1a (2)  
                                                             │┌┤ ┌─ Escherichia coli (4-322/332) WV_060327   
                                                             ││└┬┴─ Escherichia coli (4-322/332) APEC O1 (6)  
                                                             ││ └┬─ Escherichia coli (4-322/332) MS 21-1   
                                                             └┤  └─ Escherichia coli (4-322/332) SMS-3-5   
                                                              │  ┌─ Escherichia coli (4-322/332) B088 (23)  
                                                              │ ┌┴─ Escherichia coli (4-322/332) O111:H- str. 11128   
                                                              │┌┴─ Escherichia coli (4-322/332) E110019 (1)  
                                                              └┤ ┌─ Escherichia coli (4-322/332) MS 196-1   
                                                               └┬┴─ Escherichia coli (4-322/332) K12 (25)  
                                                                └┬─ fig|1040638.4.peg.4084 O104:H4 (4-322/332) str. LB226692 (5)  
                                                                 └┬─ Escherichia coli (4-322/332) M718   
                                                                  └┬─ Escherichia coli (4-322/332) MS 69-1   
                                                                   └┬─ Escherichia coli (4-322/332) H299   
                                                                    └┬─ Escherichia coli (4-322/332) IAI39 (1)  
                                                                     └─ Escherichia coli (4-322/332) TA280   
  
Transcriptional regulator YcjW, LacI family, possibly involved in maltodextrin utilization pathway (21)
Maltose regulon regulatory protein MalI (repressor for malXY) (15)
Mgl repressor and galactose ultrainduction factor GalS, HTH-type transcriptional regulator (11)
Positive regulator of L-idonate catabolism (11)
Gluconate utilization system Gnt-I transcriptional repressor (9)
Transcriptional regulator, LacI family (5)
Purine nucleotide synthesis repressor (4)
Transcriptional repressor of the lac operon (3)
Putative ThuR, regulatory protein for trehalosemaltose transport (3)
Ribose operon repressor (1)
Sucrose specific transcriptional regulator CscR, LacI family (1)
hypothetical transcriptional regulator YcjW (1)
Others (6)