fig|1040638.4.peg.768   Escherichia coli O104:H4 str. LB226692     MRCAYPAYKVSIVGRIRRLRRIRQIPGPDLPGFTHIWKAKCLVT
fig|6666666.5357.peg.62   Escherichia coli TY-2482     MRCAYPAYKVSIVGRIRRLRRIRQIPGPDLPGFTHIWKAKCLVT
Consen1   Primary consensus     MRCAYPAYKVSIVGRIRRLRRIRQIPGPDLPGFTHIWKAKCLVT
Consen2   Secondary consensus                                                 

Consensus 1 (when a gap)
Conservative difference
Consensus 2 (when a gap)
Nonconservative diff.
Other character