fig|1040638.4.peg.689   Escherichia coli O104:H4 str. LB226692                                                         MSRK---------TQRYSKE------------------------------------------------------------FKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTV------------AE---LESEILQLRKALNEARLERDILNCT---------------GVAEKYALIEQWRQQFPIEAMCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRET---------YGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNSNHNLPVAPNLLNQTFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVA--------------------------------------------------------------------TPWESA                                                                
fig|749544.3.peg.618   Escherichia coli MS 175-1                                                         MSRK---------TQRYSKE------------------------------------------------------------FKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTV------------AE---LESEILQLRKALNEARLERDILNCT---------------GVAEKYALIEQWRQQFPIEAMCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRET---------YGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNSNHNLPVAPNLLNQTFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFMALRSQRPPA-GLIHHSDRGSQYC-AYDYRVIQEQFGLKTSMSRKGNCYDNAPMESFWGTLKNESLSHYRFNNR------DEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAA
fig|331111.12.peg.5050   Escherichia coli E24377A                                                         MSRK---------TQRYSKE------------------------------------------------------------FKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTV------------AE---LESEILQLRKALNEARLERDILNCT---------------GVAEKYALIEQWRQQFPIEAMCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRET---------YGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNSNHNLPVAPNLLNQTFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFMALRSQRPPA-GLIHHSDRGSQYC-AYDYRVIQEQFGLKTSMSRKGNCYDNAPMESFWGTLKNESLSHYRFNNR------DEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAA
fig|216592.3.peg.4962   Escherichia coli 042                                                         MSRK---------TQRYSKE------------------------------------------------------------FKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTV------------AE---LESEILQLRKALNEARLERDILNCT---------------GVAEKYALIEQWRQQFPIEAMCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRET---------YGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNSNHNLPVAPNLLNQTFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFMALRSQRPPA-GLIHHSDRGSQYC-AYDYRVIQEQFGLKTSMSRKGNCYDNAPMESFWGTLKNESLSHYRFNNR------DEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAA
fig|585055.8.peg.4957   Escherichia coli 55989                                                         MSRK---------TQRYSKE------------------------------------------------------------FKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTV------------AE---LESEILQLRKALNEARLERDILNCT---------------GVAEKYALIEQWRQQFPIEAMCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRET---------YGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNSNHNLPVAPNLLNQTFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFMALRSQRPPA-GLIHHSDRGSQYC-AYDYRVIQEQFGLKTSMSRKGNCYDNAPMESFWGTLKNESLSHYRFNNR------DEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAA
fig|585055.6.peg.4951   Escherichia coli 55989                                                         MSRK---------TQRYSKE------------------------------------------------------------FKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTV------------AE---LESEILQLRKALNEARLERDILNCT---------------GVAEKYALIEQWRQQFPIEAMCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRET---------YGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNSNHNLPVAPNLLNQTFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFMALRSQRPPA-GLIHHSDRGSQYC-AYDYRVIQEQFGLKTSMSRKGNCYDNAPMESFWGTLKNESLSHYRFNNR------DEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAA
fig|216592.1.peg.2755   Escherichia coli 042                                                         MSRK---------TQRYSKE------------------------------------------------------------FKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTV------------AE---LESEILQLRKALNEARLERDILNCT---------------GVAEKYALIEQWRQQFPIEAMCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRET---------YGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNSNHNLPVAPNLLNQTFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFMALRSQRPPA-GLIHHSDRGSQYC-AYDYRVIQEQFGLKTSMSRKGNCYDNAPMESFWGTLKNESLSHYRFNNR------DEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAA
fig|358709.5.peg.2371   Escherichia coli 101-1                                                         MSRK---------TQRYSKE------------------------------------------------------------FKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTV------------AE---LESEILQLRKALNEARLERDILNCT---------------GVAEKYALIEQWRQQFPIEAMCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRET---------YGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNSNHNLPVAPNLLNQTFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFMALRSQRPPA-GLIHHSDRGSQYC-AYDYRVIQEQFGLKTSMSRKGNCYDNAPMESFWGTLKNESLSHYRFNNR------DEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAA
fig|344601.5.peg.905   Escherichia coli B171                                                         MSRK---------TQRYSKE------------------------------------------------------------FKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTV------------AE---LESEILQLRKALNEARLERDILNCT---------------GVAEKYALIEQWRQQFPIEAMCQVFGVSKSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRET---------YGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNSNHNLPVAPNLLNQTFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIVGYAMGERMTKELTGKALFMALRSQRPPA-GLIHHSDRGSQYC-AYDYRVIQEQFGLKTSMSRKGNCYDNAPMESFWGTLKNESLSHYRFNNR------DEAISVIREYIEICYNRQRRHSRLGNISPAAFREKYHQMAA
fig|550676.3.peg.3031   Escherichia coli B185     MFTEEEKIRAIELYFKYGKKLAPVVRELGYPSKRNLRRWIRSWEAGGGTKESIRHK----------HRYSDEQKQVAVEHYLNHGCCLAFTSRALGYPCTDVLARWVNELYPDRRRIFTSKANPVVPFESE-VKRQAVMALCTRQVSASEIARRIGVSRAVLYKW---KDEIIGNSAYQTMRKHN---EPSLEAERDALREEVARLNQEIRRRQMELDILKKAEEIIKKDPGISISHLNNREKTKITDALRQTYPLTELLRVLGLARSSYF-----------YHRAALKAGDKYATIRTMLTDIFNSNYQCYGYRRLHAMLRHEGVRLSEKVVRRLMVEEQLVVSRNRRRRYSSYCGEIGPAPDNLIARDFKAEQPNQKWLTDITEFQLPAGKVWLSPVVDCFDGKVVSWSLSTRPDAELVNTMLDSAVETLNAGE-RPVIHSDRGGHYR-WPGWLERVNAAGLIRSMSRKGCSPDNAACEGFFGRLKTEMYYGRKWSGITPEKFMQQVDAYIRWYNERR-----IKLSLGAVSPKMYRQQCG-L
fig|340197.5.peg.1582   Escherichia coli F11     MFTEEEKIRAIELYFKYGKKLAPVVRELGYPSKRNLRRWRRSWEAGGGAKESIRHK----------HRYSDEQKQVAGEHYLNHGCCLAFTSRALGYPCTDVLARWVNELYPDRRRIFTSKANPVVPFEPE-VKRQAVMALCTRQVSASEIARRIGVSRAVLYKW---KDEIIGNSAYQTMRKHN---EPSLEAERDALREEVARLNQEIRRRQMELDILKKAEEIIKKDPGISISHLNNREKTKIADALRQTYPLTELLHVLGLARSGYF-----------YHRAALKAGDKYATIRTMLTDIFNSNYQCYGYRRLHAMLRHEGGRLSEKVVRRLMVEEQLVVSRNRRRRYSSYCGEIGPAPDNLIARDFKAEQPNQKWLTDITEFQLPAGKVWLSPVVDCFDGKVVSWSLSTRPDAELINTMLDSAVETLNAGE-RPVIHSDRGGIIAGQAGWKE                                                                                          
fig|749550.3.peg.2854   Escherichia coli MS 200-1     MFTEEEKIRAIELYFKYGKKLAPVVRELGYPSKRNLRRWRRSWEAGGGAKESIRHK----------HRYSDEQKQVAGEHYLNHGCCLAFTSRALGYPCTDVLARWVNELYPDRRRIFTSKANPVVPFEPE-VKRQAVMALCTRQVSASEIARRIGVSRAVLYKW---KDEIIGNSAYQTMRKHN---EPSLEAERDALREEVARLNQEIRRRQMELDILKKAEEIIKKDPGISISHLNNREKTKIADALRQTYPLTELLHVLGLARSGYF-----------YHRAALKAGDKYATIRTMLTDIFNSNYQCYGYRRLHAMLRHEGGRLSEKVVRRLMVEEQLVVSRNRRRRYSSYCGEIGPAPDNLIARDFKAEQPNQKWLTDITEFQLPAGKVWLSPVVDCFDGKVVSWSLSTRPDAELINTMLDSAVETLNAGE-RPVIHSDRGGIIAGQAGWKE                                                                                          
fig|656417.3.peg.1968   Escherichia coli M605     MFTEEQKIRAIELYFKYGKKPAPVVRELGYPSKRNLRRWIRSWEAGGGAKESIRHK----------PRYTEEQKQVVVEHYLNHGCCLAFTSRTLGYPCTDVLARWVNELYPDRRCIFTSKANPVAPFEPE-VKRQAVMALCTRQVSASEIARRIGVSRTVLYKW---KDEIIGNSAYQTMRKHN---KPSLEAERDALREEVARLNQEIRRQQMEPDILKKTEEIIKKAPG--ISHLNNREKTKITDALRQTYSLTELLRVPGLARSSYF-----------YHRAVLKAGDKYATIRTMLTDIFNNNYQCYGYRRLHAMLRHEGVRLSEKVVRRLMMEEQLVVSRNRRRRYSSYCGEIGPAPDNLIARDFKAEQPNQKWLTDITEFQLPAGKVWLSPIVDCFDGKVVSWSLSTRPDAELVNSMLDNAVETLNAGE-RPVIHSDRDGHYR-WPGWLERVNAAGLIRSMSRKGCSPDNAACEGFFGRLKTEMYYGRKWSGITPEKFMQQVDAYIRWYILCNSCCYFLKTQNSSINIRIYRKNCN-Y  
fig|340184.6.peg.1424   Escherichia coli B7A     MFTEEEKIRAIELYFKYGKKLAPVVRELGYPSKRNLRRWIRSWEAGGGVKESIRHK----------HRYSDEQKQVAVEHYLNHGCCLAFTSRALGYPCTDVLARWVNELYPDRRRIFTSKANPVAPFEPE-VKRQAVMALSTRQVSASEIARRIGVSRAVLYKW---KDEIIGNSAYQTMRKHN---EPSLEAERDALREEVARLNQEIRRRQMELDILKKAEEIIKKNPGISISHLNNREKTKIADALRQTYPLTELLHVLSLARSSYF-----------YHRAALKAGDKYATIRTMLTDIFNSNYQCYGYRRLHAMLRHEGVRLSEKVVRRLMVEEQLVVSRNRRRRYSSYCGEIGPAPDNLIARDFKAEQPNQKWLTDITEFQLPAGKVWLSPVVDCFDGKVVSWSLSTRPDAELVNTMLDSAVETLNAGE-RPVIHSDRGGHYR-WPGWLERVNAAGLIRSMSRKGCSPDNAACEGFFGRLKTEMYYGRKWSGITPEKFMQQVDAYIRWYNERR-----IKLSLGAVSPKMYRQQCG-L
fig|679205.4.peg.1046   Escherichia coli MS 124-1     MYSYADRIRAVELYIKLGLRVRATIRQLGYPTKNALKGWYQHY---------LKHQDLPASQVPRAPKYSLQQRQVAVAHYLAHDRCIAATMRVLGYPGRGTLTAWVRQDCPEASQSILGRSWPVT--KPDALMYEGVVQLCTRQSSAQEIADKLGVCRGTLYNW---KNQLLGPCAPASM-KHSPKRSPVLDAA--ALRCQVESLRQDVRRLKIERELLKQAHEILKNGADIDLHRLANKDKAVLVEALHGQYELPELLCHVGLARSSYF-----------YHRARLKLADKYLDVRRSITDIFDSNYRCYGYRRVQASLLKECTGISEKVVRRLMKQEGLIVVKPKRRRYNSYLGEIGAAPQNLINRDFHAAAPNEKWLTDITEFQIPSGKVYLSPVIDCFDGLVVSWSIGTHPNANLVNTMLDAAIDAVQGSESRPMIHSDRGAHYR-WPGWLSRVHDAKLVRSMSRKGCSPDNAACEGFFGRLKMELFYPGNWQSTTIEQFIEAVDTYIRWYNEKR-----IKVSLGRLSPVEYRQKLG-LTT
fig|749533.3.peg.3905   Escherichia coli MS 84-1     MYSYADRIRAVELYIKLGLRVRATIRQLGYPTKNALKGWYQHY---------LKHQDLPASQVPRAPKYSLQQRQVAVAHYLAHDRCIAATMRVLGYPGRGTLTAWVRQDCPEASQSILGRSWPVT--KPDALMYEGVVQLCTRQSSAQEIADKLGVCRGTLYNW---KNQLLGPCAPASM-KHSPKRSPVLDAA--ALRCQVESLRQDVRRLKIERELLKQAHEILKNGADIDLHRLANKDKAVLVEALHGQYELPELLCHVGLARSSYF-----------YHRARLKLADKYLDVRRSITDIFDSNYRCYGYRRVQASLLKECTGISEKVVRRLMKQEGLIVVKPKRRRYNSYLGEIGAAPQNLINRDFHAAAPNEKWLTDITEFQIPSGKVYLSPVIDCFDGLVVSWSIGTHPNANLVNTMLDAAIDAVQGSESRPMIHSDRGAHYR-WPGWLSRVHDAKLVRSMSRKGCSPDNAACEGFFGRLKMELFYPGNWQSTTIEQFIEAVDTYIRWYNEKR-----IKVSLGRLSPVEYRQKLG-LTT
Consen1   Primary consensus     MfteeekIRAiELYfKyGkklapvvReLGYPsKrnLrrW rsweaggg kesm rk---------  rYS e- ---  --- -  - - - - ----    -  --    -           -- -- - - k eaV  vlenQ SisEgA rlsl egtLg Wvtaa k lG  g  tv--- --- - - Ae---Le ei  Lrk lne rlErdiLn t -- -    -    - v eK  l eqwrqqfpi amc v GvsRSgYynwvqhepsdrkqsderLKl iKva iRt  T--- --- -YGtRRlqt L  ng  vgrdrlaRLrkel L c q rkfRattn nhnlpva NLlnqtF p aPNqvWvaDlTyva q GwlyLagi Dvytc iVgyamgerm keL g aLf Al s    a-glihHSDR   y -  dy  iq  fgL tSMSRKGncyDNApmEsFwGtLK E  s   f   - - - d aisvIReYiE  ynrqrrh rLG iSP  fRek hqm a
Consen2   Secondary consensus      ysyadr   v   i l lrvrati q    t na kg  qhy----- ---  hqdlpasqvpr  k   qq qva  hyl h  c a t r lgyp    l  wv    p           pv pf p a m qg   lctr   aq i  kigv rav y  ---k   i   a  smrkh pkr p l  arda r qv   nq  rr    lel k a ei k    i    l n d   i dalhgtyel ell h  la  s f-----------yhraa  a d yl v r   dif sny c  y  vha    ec   sekvvr  mvqe   v   krr y sy geigaap   iard  a q  ek lt i efq p  kvw spv  cfdg v sws sthp an  n m d         esrp i       i g  gw  rv  ak  r      csp   ac g f r      y   w   t e f   vd y  w n   -----ik s        y qq g-l t

Consensus 1 (when a gap)
Conservative difference
Consensus 2 (when a gap)
Nonconservative diff.
Other character