fig|1040638.4.peg.644
Escherichia coli O104:H4 str. LB226692
MTFEQLLEEYFFARLLRPDTQSCYCTAVNQ
Y
THW
--
RNVLPAEVT
PH
MVLEWRHYLLNVRCIKPVSWNHYMRHMRALYNFAIEQGLLEQFINPFQKTSLRESRKKKKTLTREQILA
S
RKVLNQFIEREKMQR
------
GYRSPLYPAWFWLTVVETFNYTAIRLNQLIHLRVRDIDLVHDTLFIQIEGSKSHDEH
I
VPIA
S
RLRPYLEHLL
E
EAK
T
KG
I
RADDQLFNINRFSRRTLRQ
G
K
-----
-
--
P
M
TENQVSY
-
FFAKLSDACHSRF
P
SHRYRHTVAT
E
LMQKPEQNLYVTQKLLGHRDI
K
VTLSYIEHNVEMLRSCVERD
fig|6666666.5357.peg.1205
Escherichia coli TY-2482
MTFEQLLEEYFFARLLRPDTQSCYCTAVNQ
Y
THW
--
RNVLPAEVT
PH
MVLEWRHYLLNVRCIKPVSWNHYMRHMRALYNFAIEQGLLEQFINPFQKTSLRESRKKKKTLTREQILA
S
RKVLNQFIEREKMQR
------
GYRSPLYPAWFWLTVVETFNYTAIRLNQLIHLRVRDIDLVHDTLFIQIEGSKSHDEH
I
VPIA
S
RLRPYLEHLL
E
EAK
T
KG
I
RADDQLFNINRFSRRTLRQ
G
K
-----
-
--
P
M
TENQVSY
-
FFAKLSDACHSRF
P
SHRYRHTVAT
E
LMQKPEQNLYVTQKLLGHRDI
K
VTLSYIEHNVEMLRSCVERD
fig|585055.6.peg.4913
Escherichia coli 55989
MTFEQLLEEYFFARLLRPDTQSCYCTAVNQ
Y
THW
--
RNVLPAEVT
PH
MVLEWRHYLLNVRCIKPVSWNHYMRHMRALYNFAIEQGLLEQFINPFQKTSLRESRKKKKTLTREQILA
S
RKVLNQFIEREKMQR
------
GYRSPLYPAWFWLTVVETFNYTAIRLNQLIHLRVRDIDLVHDTLFIQIEGSKSHDEH
I
VPIA
S
RLRPYLEHLL
E
EAK
T
KG
I
RADDQLFNINRFSRRTLRQ
G
K
-----
-
--
P
M
TENQVSY
-
FFAKLSDACHSRF
P
SHRYRHTVAT
E
LMQKPEQNLYVTQKLLGHRDI
K
VTLSYIEHNVEMLRSCVERD
fig|585055.8.peg.4917
Escherichia coli 55989
MTFEQLLEEYFFARLLRPDTQSCYCTAVNQ
Y
THW
--
RNVLPAEVT
PH
MVLEWRHYLLNVRCIKPVSWNHYMRHMRALYNFAIEQGLLEQFINPFQKTSLRESRKKKKTLTREQILA
S
RKVLNQFIEREKMQR
------
GYRSPLYPAWFWLTVVETFNYTAIRLNQLIHLRVRDIDLVHDTLFIQIEGSKSHDEH
I
VPIA
S
RLRPYLEHLL
E
EAK
T
KG
I
RADDQLFNINRFSRRTLRQ
G
K
-----
-
--
P
M
TENQVSY
-
FFAKLSDACHSRF
P
SHRYRHTVAT
E
LMQKPEQNLYVTQKLLGHRDI
K
VTLSYIEHNVEMLRSCVERD
fig|431946.3.peg.4329
Escherichia coli SE15
MTFEQLLEEYFFARLLRPDTQSCYCTAVNQFTHW
--
RNVLPAEVT
PH
MVLEWRHYLLNVRCIKPVSWNHYMRHMRALYNFAIEQGLLEQFINPFQKTSLRESRKKKKTLTREQILA
S
RKVLNQFIEREKMQR
------
GYRSPLYPAWFWLTVVETFNYTAIRLNQLIHLRVRDIDLVHDTLFIQIEGSKSHDEH
I
V
S
IA
S
RLRPYLEHLL
E
EAK
T
KG
I
RADDQLFNINRFSRRTLRQ
G
K
-----
-
--
P
M
TENQVSY
-
FFAKLSDACHSRF
P
SHRYRHTVAT
E
LMQKPEQNLYVTQKLLGHRDI
K
VTLSYIEHNVEMLRSCVERD
fig|656440.3.peg.4855
Escherichia coli TA206
MTFEQ
I
LEEYFFARLLRPDTQSCYCTAVNQFTHW
--
RNVLPAEVT
PH
MVLEWRHYLLNVRCIKPVSWNHYMRHMRALYNFAIEQGLLEQFINPFQKTSLRESRKKKKTLTREQILA
S
RKVLNQFIEREKMQR
------
GYRSPLYPAWFWLTVVETFNYTAIRLNQLIHLRVRDIDLVHDTLFIQ
S
EGSKSHDEH
V
VPIA
S
RLRPYLE
Q
M
L
G
EAK
T
KG
M
RADDQLFNINRFSRRTLRQ
G
K
-----
-
--
P
M
TENQVSY
-
FFAKLSDACHSRFSSHRYRHTVAT
E
LMQKPEQNLYVTQKLLGHRDI
K
VTLSYIEHNVEMLRSCVERD
fig|685038.3.peg.4293
Escherichia coli O83:H1 str. NRG 857C (5-318/320)
TF
GT
L
T
E
H
YF
Y
S
K
S
LRP
A
T
EWS
Y
Q
KV
V
R
S
F
EG
F
TPH
N
--
PA
N
I
D
HL
T
VL
K
WRH
R
V
LN
D
Q
NCA
T
R
T
WN
NKVA
HMRAL
F
NF
G
I
K
QGLL
P
Q
A
E
NPF
NG
A
V
V
R
PGT
KKKKTLT
Q
T
Q
M
D
A
M
Y
RLM
E
R
H
L
E
T
E
GR
K
GNSSMFN
G
R
R
NA
L
R
P
V
WFWLTV
M
N
V
F
R
YTAIR
Q
NQL
L
H
I
R
L
G
DI
N
L
E
E
RW
I
D
L
N
IEG
A
K
N
H
R
EH
R
VPI
V
S
A
L
Y
P
S
LE
L
L
V
L
R
A
G
E
V
G
M
EL
DDQLFN
V
GW
F
-
D
LVR
KK
K
Y
PEVMN
E
Y
-
P
L
RA
-----
-
FF
K
R
LS
RE
C
K
F
TI
S
P
HR
F
RHTVAT
H
M
M
K
S
PE
R
NLYV
VK
KLLGH
V
S
I
T
S
TL
E
YI
D
E
NV
D
S
LR
N
I
L
E
T
E
fig|753642.3.peg.3912
Escherichia coli NC101 (9-316/352)
L
T
WDE
LL
D
EYFF
S
R
N
LRPDT
EWS
Y
RKV
V
RG
F
VDFMGEG
V
F
PA
D
VT
QR
DIQR
WR
RQV
L
KTQSLSTYT
WN
NKVA
H
L
RA
IFG
F
G
I
KK
GLL
P
Q
TE
NP
LCEA
S
VAKEA
KKKKTL
NKD
Q
MIQ
V
YL
V
VQK
F
A
E
Y
E
TQ
QR
VPC
--
DRR
R
NA
LYPA
RY
WLTV
LDVLR
YT
GM
R
F
NQL
Q
H
I
R
LK
D
VRPGEGVIEL
Q
L
EGSK
T
H
R
E
W
C
VPI
V
A
P
L
KAP
LE
L
LL
S
R
A
R
R
L
G
A
GP
DD
F
LF
DVC
RF
TDCIEPD
D
Y
-----
V
YC
P
V
RAH
Q
AVKG
FF
RR
LS
RE
C
GFLV
S
A
HR
F
RHT
L
AT
I
LM
ES
PE
R
N
MHLVKSM
LGH
QS
I
A
T
T
ME
Y
VDVS
V
fig|331111.12.peg.3632
Escherichia coli E24377A (9-316/352)
L
T
WDE
LL
D
EYFF
S
R
N
LRPDT
EWS
Y
RKV
V
RG
F
VDFMGEG
V
F
PA
D
VT
QR
DIQR
WR
RQV
L
KTQSLSTYT
WN
NKVA
H
L
RA
IFG
F
G
I
KK
GLL
P
Q
TE
NP
LCEA
S
VAKEA
KKKKTL
NKD
Q
MIQ
V
YL
V
VQK
F
A
E
Y
E
TQ
QR
VPC
--
DRR
R
NA
LYPA
RY
WLTV
LDVLR
YT
GM
R
F
NQL
Q
H
I
R
LK
D
VRPGEGVIEL
Q
L
EGSK
T
H
R
E
W
C
VPI
V
E
P
L
KAP
LE
L
LL
S
R
A
R
R
L
G
A
GP
DD
F
LF
DVC
RF
TDCIEPD
D
Y
-----
V
YC
P
A
RAH
Q
AVKG
FF
RR
LS
RE
C
GFLV
S
A
HR
F
RHT
L
AT
I
LM
ES
PE
R
N
MHLVKSM
LGH
QS
I
A
T
T
ME
Y
VDVS
V
fig|331111.3.peg.1051
Escherichia coli E24377A (24-331/367)
L
T
WDE
LL
D
EYFF
S
R
N
LRPDT
EWS
Y
RKV
V
RG
F
VDFMGEG
V
F
PA
D
VT
QR
DIQR
WR
RQV
L
KTQSLSTYT
WN
NKVA
H
L
RA
IFG
F
G
I
KK
GLL
P
Q
TE
NP
LCEA
S
VAKEA
KKKKTL
NKD
Q
MIQ
V
YL
V
VQK
F
A
E
Y
E
TQ
QR
VPC
--
DRR
R
NA
LYPA
RY
WLTV
LDVLR
YT
GM
R
F
NQL
Q
H
I
R
LK
D
VRPGEGVIEL
Q
L
EGSK
T
H
R
E
W
C
VPI
V
E
P
L
KAP
LE
L
LL
S
R
A
R
R
L
G
A
GP
DD
F
LF
DVC
RF
TDCIEPD
D
Y
-----
V
YC
P
A
RAH
Q
AVKG
FF
RR
LS
RE
C
GFLV
S
A
HR
F
RHT
L
AT
I
LM
ES
PE
R
N
MHLVKSM
LGH
QS
I
A
T
T
ME
Y
VDVS
V
fig|656444.3.peg.4113
Escherichia coli TA280 (9-316/352)
L
T
WDE
LL
D
EYFF
S
R
N
LRPDT
EWS
Y
RKV
V
RG
F
VDFMGEG
V
F
PA
D
VT
LL
DIQR
WR
RQV
L
KTQSLSTYT
WN
NKVA
H
L
RA
IFG
F
G
I
KK
GLL
P
H
TE
NP
LCEA
S
VAKEA
KKKKTL
NKD
Q
MIQ
I
YL
V
VQK
F
A
E
Y
E
TQ
QR
VPC
--
DRR
R
NA
LYPA
RY
WLTV
LDVLR
YT
GM
R
F
NQL
Q
H
I
R
LK
D
VRPGEGVIEL
Q
L
EGSK
T
H
R
E
W
G
VPI
V
T
P
L
KAP
LE
L
LL
S
R
A
R
C
L
G
A
GP
DD
F
LF
DVC
RF
TDCIEPD
K
Y
-----
E
YC
P
A
RAH
Q
AVKG
FF
RR
LS
RE
C
GFLV
S
A
HR
F
RHT
L
AT
V
LM
ES
PE
R
N
MHLVKS
LLGH
QS
I
V
T
T
ME
Y
VDVS
V
Consen1
Primary consensus
mTfeqLLeEYFFaRlLRPDTqscYctaVnqfthw
--
rnVlPAeVT
mvleWRhylLnvrcikpvsWNhymrHmRAlynFaIeqGLLeQfiNPfqktSlresrKKKKTLtreQila
rkVlnqFiErEkmQR
------
gyRspLYPAwfWLTVvetfnYTaiRlNQLiHlRvrDidlvhdtlfiQiEGSKsHdEh
VPIa
rLrpyLEhLL
eAk
kG
raDDqLFninRFsrrtlrq
k
-----
--
P
tenQvsy
-
FFakLSdaChsrfssHRyRHTvAT
LMqkPEqNlyvtqklLGHrdI
vTlsYiehnVEMLRSCVERD
Consen2
Secondary consensus
l
wde
d
s
n
ews
rkv
rgyvdfmgeg
f
d
diqr
rqv
ktqslstyt
nkva
l
ifg
g
kk
p
te
lcea
vakea
nkd
miq
yl
vqk
a
y
tq
vpc
drr
na
ry
ldvlr
gm
f
q
i
lk
vrpgegviel
l
t
r
w
v
p
kap
l
r
r
l
gp
f
dvc
tdciepd
y
yc
rah
avkg
rr
re
gflvpa
f
l
es
r
mhlvksm
qs
t
me
vdvs
Consensus 1
(when a gap)
Conservative difference
Consensus 2
(when a gap)
Nonconservative diff.
Other character