fig|1040638.4.peg.634   Escherichia coli O104:H4 str. LB226692     MGRKKKNNLKRI-EKNSNFNSKRQ--RPPTH-------TNNEIPGEEIIFILE-TESPELSDEEL---EIIQSMPGVYFRPRTRKQTIISDGTLKRWQLLGFSSYHHFLGFNAFNNC-VGGASEVDLMAHLEDTLASNKRSN
fig|749547.3.peg.1756   Escherichia coli MS 187-1     MGRKKKNNLKRI-EKNSNFNSKRQ--RPPTH-------TNNEIPGEEIIFILE-TESPELSDEEL---EIIQSMPGVYFRPRTRKQTIISDGTLKRWQLLGFSSYHHFLGFNAFNNC-VGGASEVDLMAHLEDTLASNKRSN
fig|340184.6.peg.1120   Escherichia coli B7A     MGKKKRNNLKRI-EKNSNFNSTRQ--RPPTH-------TNNEIPGEEIIFILE-AESPELSDEEL---EIIQSMPGVYFRPRTRKQTIISDGTLKRWQLLGFSSYHHFLGFNAFNNC-VGGASEVDLMAHLEDTLASNKRSN
fig|670888.3.peg.3429   Escherichia coli 1827-70 (5-117/126)       KGKKNVITTIGEACDQYALNNP--RKYNY-------EHDAEPGEELIFILE-EPSPELTAEEL---SIIQSMPGVYFNPRPRKTTVIDSSLLKRWQCLGFQDMNHFRGYMALNSLQYAGVRETDLL              
fig|753642.3.peg.265   Escherichia coli NC101 (1-135/136)     MAKRKNNVVKKIGDSASLLSKPKSILRRKDFKELVTLTKHNSAPGEWKTEIIEHSPSVPCGDEYIALQEILSSTPGVFWKPRKRKEYIVDSSDLRKYQILGFEDYNHYVGYLATNGL-NNLVPEFQILDNADHYGD      
Consen1   Primary consensus     MGkkKkNnlKrI-E  S fn  r --R   h------- nN  PGEEiIFILE-teSPELsDEEL---EIIQSMPGVYFrPR RKqTIIsdg LKRWQlLGF sYhHFlGf A Nnc-  Ga E DLmAHLEDTLASNKRSN
Consen2   Secondary consensus       r    v    g                          h               p                                 dss           d n    y     l    v     l              

Consensus 1 (when a gap)
Conservative difference
Consensus 2 (when a gap)
Nonconservative diff.
Other character