fig|1040638.4.peg.634   Escherichia coli O104:H4 str. LB226692     MGRKK--KNNLKRI-EKNSNFNSKRQ--RPPTH-------TNNEIPGEEIIFILE-TESPELSDEEL---EIIQSMPGVYFRPRTRKQTIISDGTLKRWQLLGFSSYHHFLGFNAFNNC-VGGASEVDLM----AHLEDTLASNKRSN
fig|749547.3.peg.1756   Escherichia coli MS 187-1     MGRKK--KNNLKRI-EKNSNFNSKRQ--RPPTH-------TNNEIPGEEIIFILE-TESPELSDEEL---EIIQSMPGVYFRPRTRKQTIISDGTLKRWQLLGFSSYHHFLGFNAFNNC-VGGASEVDLM----AHLEDTLASNKRSN
fig|340184.6.peg.1120   Escherichia coli B7A     MGKKK--RNNLKRI-EKNSNFNSTRQ--RPPTH-------TNNEIPGEEIIFILE-AESPELSDEEL---EIIQSMPGVYFRPRTRKQTIISDGTLKRWQLLGFSSYHHFLGFNAFNNC-VGGASEVDLM----AHLEDTLASNKRSN
fig|670888.3.peg.3429   Escherichia coli 1827-70     MSKKKGKKNVITTIGEACDQYALNNP--RKYNY-------EHDAEPGEELIFILE-EPSPELTAEEL---SIIQSMPGVYFNPRPRKTTVIDSSLLKRWQCLGFQDMNHFRGYMALNSLQYAGVRETDLLLLDKVNIDD         
fig|753642.3.peg.265   Escherichia coli NC101     MAKRK--NNVVKKIGDSASLLSKPKSILRRKDFKELVTLTKHNSAPGEWKTEIIEHSPSVPCGDEYIALQEILSSTPGVFWKPRKRKEYIVDSSDLRKYQILGFEDYNHYVGYLATNGL-NNLVPEFQIL-DNADHYGD-F       
Consen1   Primary consensus     M kKK--kNnlKrI-E  S fn  r --R   h------- nN  PGEEiIFILE-teSPELsDEEL---EIIQSMPGVYFrPR RKqTIIsdg LKRWQlLGF sYhHFlGf A Nnc-  Ga E DLm-    HleDTLASNKRSN
Consen2   Secondary consensus       r      v    g                          h               p                                 dss           d n    y     l    v     l                  

Consensus 1 (when a gap)
Conservative difference
Consensus 2 (when a gap)
Nonconservative diff.
Other character