fig|1040638.4.peg.624   Escherichia coli O104:H4 str. LB226692                                                                                                                                                    MLQNNAKELTRVGVDPNSVAQMYQQNPSGFGEFVDHLGMAALGPIDYFNVQDKMAGRDIDRGRLAETIRSNQAGEALQARGQDISRANAL-TSAYAPTAAMQNYNQYAQMLKADPDGAAAFAAAAGINPNAKKLLKVETNPDGSVT-----------KYYTDGSEEAGKLNQPISGDGIKPISLPQAQSIIDKANEGSKKAAGFALRLKDSMDSMNQLSKSIDPKRVALINRSLG-----DGTIANLSL--------SPAEQQYMVNARDALYAILRPETGAAI---------TLPEMQEYSKMYLPQPG-DSKAATETKMRKMQGQYNSLRGQSGRVYDALVVSSAANSQQQSNSQQPTNTQQ--QQSQSGSYTSKSGIQFTVE
fig|749527.3.peg.3876   Escherichia coli MS 21-1                                                                                                  MRNLITAFPEEFEEVRKGMSYVDDAQRDDYGNLALKAQVASSLGQGAFGRFMMDNEQEMRRLGIPPETIAEMQVNDPQGFQHFAGNLALFSLGHEKYFDIKDQMEGRDIERGKLAETIRSNQAGEALQARGQDISRANAL-TSAYAPTAAMQNYNQYAQMLKADPEGAAAFAAAAGINTNAKKLMSVRENDDGTVT-----------KYYTDGSEEQGKLNQPISGDGFRPIALPTAQKIMEKSPEGAKKAAGFAYRVRDALDSIDTLKDQLSPQRVAIINNALG-----NGTLANLTL--------SPAEQQYVVNANDAIMAILRQETGASI---------LPAEMSKYYQMYFPQPG-DSTKTIDTKRRKMENQFNSLKAASGRTYDALRVISAVDRGTASSSQTLPQSEQVSQPAASSNFS---SL-WG-D
fig|679205.4.peg.3934   Escherichia coli MS 124-1     MATWQLG-----GLPGMAPQNDNAPRSS----------VPQPVQYQQQPNVGLMALQGLRGVAEINQQARQQQRKAEFQKAYAGAFESGDRNKMRSLISEYPEEFESVQKGMGFIDDDQRNSIGHLATSAQIASSLGTGAFGKFIADNEDEMRRLGISPESVAEMHVNDPQEFQRLAGSMALFSLGHEKYFDIKDRMEGRDIERGKLAETIRSNQAGEALQARGQDISRANAL-TSAYAPTAAMQNYNQYAQMLKADPEGAAAFAAAAGINTNAKKLMSVRENDDGTVT-----------KYYTDGSEEQGKLNQPISGDGFRPIALPTAQKIMEKSPEGAKKVAGFAYRVRDALDSMDTLKGQLSPQRVAIINNALG-----NGTLANLTL--------SPTEQQYVVNANDAIMAILRQETGAAI---------VPAEMSKYYQMYFPQPG-DSTKTIDTKRRKMENQFNSLKAASGRAYDALRVISAVDRGTSSSSQTLPQSEQVSQPAASSNFS---SL-WG-D
fig|655817.3.peg.385   Escherichia coli ABU 83972     MATWQLG-----GLPSMAPQNDNAPRSS----------VPQPVQYQQQPNVGLMALQGLRGVAEINQQARQQQRKAEFQKAYAGAFESGDRNKMRSLISEYPEEFESVQKGMGFIDDDQRNSIGHLATSAQIASSLGTGAFGKFIADNEDEMRRLGISPESVAEMHVNDPQGFQRLAGSMALFSLGHEKYFDIKDQMEGRDIERGKLAETIRSNQAGEALQARGQDISRANAL-TSAYAPTAAMQNYNQYAQMLKADPEGAAAFAAAAGINTNAKKLMSVRENDDGTVT-----------KYYTDGSEEQGKLNQPISGDGFRPIALPTAQKIMEKSPEGAKKAAGFAYRVRDALDSIDTLKDQLSPQRVAIINNALG-----NGTLANLTL--------SPIEQQYVVNANDAIMAILRQETGASI---------LPAEMSKYYQMYFPQPG-DSTKTIDTKRRKMENQFNSLKAASGRAYDALRVISAVDRGTSSSSQTLPQSEQVSQPAASSNFS---SL-WG-D
fig|216592.3.peg.4122   Escherichia coli 042     MATWQLG-----GLPSMAPQNDNAPRSS----------VPQPVQYQQQPNVGLMALQGLRGVAEINQQARQQQRKAEFQKAYAGAFESGDRNKMRSLISEYPEEFESVQKGMGFIDDDQRNSIGHLATSAQIASSLGTGAFGKFIADNEDEMRRLGISPESVAEMHVNDPQEFQRLAGSMALFSLGHEKYFDIKDRMEGRDIERGKLAETIRSNQAGEALQARGQDISRANAL-TSAYAPTAAMQNYNQYAQMLKADPEGAAAFAAAAGINTNAKKLMSVRENDDGTVT-----------KYYTDGSEEQGKLNQPISGDGFRPIALPTAQKIMEKSPEGAKKAAGFAYRVRDALDSMDTLKGQLSPQRVAIINNALG-----NGTLANLTL--------SPTEQQYVVNANDAIMAILRQETGAAI---------VPAEMSKYYQMYFPQPG-DSTKTIDTKRRKMENQFNSLKAASGRAYDALRVISAVDRGTSSSSQTLPQSEQVSQPAASSNFS---SL-WG-D
fig|749533.3.peg.112   Escherichia coli MS 84-1     MATWQLG-----GLPGMAPQNDNAPRSS----------VPQPVQYQQQPNVGLMALQGLRGVAEINQQARQQQRKAEFQKAYAGAFESGDRNKMRSLISEYPEEFESVQKGMGFIDDDQRNSIGHLATSAQIASSLGTGAFGKFIADNEDEMRRLGISPESVAEMHVNDPQEFQRLAGSMALFSLGHEKYFDIKDRMEGRDIERGKLAETIRSNQAGEALQARGQDISRANAL-TSAYAPTAAMQNYNQYAQMLKADPEGAAAFAAAAGINTNAKKLMSVRENDDGTVT-----------KYYTDGSEEQGKLNQPISGDGFRPIALPTAQKIMEKSPEGAKKVAGFAYRVRDALDSMDTLKGQLSPQRVAIINNALG-----NGTLANLTL--------SPTEQQYVVNANDAIMAILRQETGAAI---------VPAEMSKYYQMYFPQPG-DSTKTIDTKRRKMENQFNSLKAASGRAYDALRVISAVDRGTSSSSQTLPQSEQVSQPAASSNFS---SL-WG-D
fig|525281.3.peg.2627   Escherichia coli 83972     MATWQLG-----GLPSMAPQNDNAPRSS----------VPQPVQYQQQPNVGLMALQGLRGVAEINQQARQQQRKAEFQKAYAGAFESGDRNKMRSLISEYPEEFESVQKGMGFIDDDQRNSIGHLATSAQIASSLGTGAFGKFIADNEDEMRRLGISPESVAEMHVNDPQGFQRLAGSMALFSLGHEKYFDIKDQMEGRDIERGKLAETIRSNQAGEALQARGQDISRANAL-TSAYAPTAAMQNYNQYAQMLKADPEGAAAFAAAAGINTNAKKLMSVRENDDGTVT-----------KYYTDGSEEQGKLNQPISGDGFRPIALPTAQKIMEKSPEGAKKAAGFAYRVRDALDSIDTLKDQLSPQRVAIINNALG-----NGTLANLTL--------SPIEQQYVVNANDAIMAILRQETGASI---------LPAEMSKYYQMYFPQPG-DSTKTIDTKRRKMENQFNSLKAASGRAYDALRVISAVDRGTSSSSQTLPQSEQVSQPAASSNFS---SL-WG-D
fig|216592.1.peg.949   Escherichia coli 042     MATWQLG-----GLPSMAPQNDNAPRSS----------VPQPVQYQQQPNVGLMALQGLRGVAEINQQARQQQRKAEFQKAYAGAFESGDRNKMRSLISEYPEEFESVQKGMGFIDDDQRNSIGHLATSAQIASSLGTGAFGKFIADNEDEMRRLGISPESVAEMHVNDPQEFQRLAGSMALFSLGHEKYFDIKDRMEGRDIERGKLAETIRSNQAGEALQARGQDISRANAL-TSAYAPTAAMQNYNQYAQMLKADPEGAAAFAAAAGINTNAKKLMSVRENDDGTVT-----------KYYTDGSEEQGKLNQPISGDGFRPIALPTAQKIMEKSPEGAKKAAGFAYRVRDALDSMDTLKGQLSPQRVAIINNALG-----NGTLANLTL--------SPTEQQYVVNANDAIMAILRQETGAAI---------VPAEMSKYYQMYFPQPG-DSTKTIDTKRRKMENQFNSLKAASGRAYDALRVISAVDRGTSSSSQTLPQSEQVSQPAASSNFS---SL-WG-D
fig|670897.3.peg.3670   Escherichia coli 2362-75     MATWQLG-----GLPSMAPQNDNAPRSS----------VPQPVQYQQQPNVGLMALQGLRGVAEINQQARQQQRKSEFQKAYAGAFESGDRNKMRSLISEYPEEFESVQKGMGFIDDDQRNSIGHLATSAQIASSLGTGAFGKFIADNEDEMRRLGISPESVAEMHVNDPQGFQRLAGSMALFSLGHEKYFDIKDQMEGRDIERGRLAETIRSNQAGEALQARGQDISRANAL-TSAYAPTAAMQNYNQYAQMLKADPEGAAAFAAAAGINTNAKKLMSVRENDDGTVT-----------KYYTDGSEEQGKLNQPISGDGFRPIALPTAQKIMEKSPEGAKKAAGFAYRVRDALDSIDTLKDQLSPQRVAIINNALG-----NGTLANLTL--------SPTEQQYVVNANDAIMAILRQETGAAI---------VPAEMSKYYQMYFPQPG-DSTKTIDTKRRKMENQFNSLKAASGRAYDALRVISAVDRGTSSSSQTLPQSEQVSQPAASSNFS---SL-WG-D
fig|405955.13.peg.2581   Escherichia coli APEC O1     MATWQQGINSGGFLAGIGTQNENAPKASDINATLGLIRENNELARSGANNVALTGLRGLAGVADIYKQQQKQERKAAFQKGYADAYASGDREQMRNLITAFPEEFEEVRKGMGYVDDAQRDDFGNLALKAQVASSLGPGAFGRFMMDNEKEMRRLGIPPETIAEMQVNDPQGFQHFAGNLALFSLGHEKYFDIKDQMEGRDIERGKLAETIRSNKAGEGLKAQSIAVSRENSLRTAGGAVPASVKEY-QYFNSL--SPEQQKTYLRVRG-RPDAGGENVVQLADGRTVTVGRKLHGAGANAFYEGIDNEGNMIRVPASSIAAPATSAANAQN----------------YEMKKDLDAISG----------ASIDD-LGFMTGITGSSGSFALGADIRSRASGVEERRLYNAAQRIMGKMQNQGIAAARDMGASGINTEAEANRYFQG-MPKPDFSSPEALQQSMRDIQ-QYTD-------NYNQQYNVNVGNGGKKSSRQQPAT-----QQSAGGSYTSKSGIQFTVE
fig|585035.6.peg.2488   Escherichia coli S88     MATWQQGINSGGFLAGIGTQNENAPKASDINATLGLIRENNELARSGANNVALTGLRGLAGVADIYKQQQKQERKAAFQKGYADAYASGDREQMRNLITAFPEEFEEVRKGMGYVDDAQRDDFGNLALKAQVASSLGPGAFGRFMMDNEKEMRRLGIPPETIAEMQVNDPQGFQHFAGNLALFSLGHEKYFDIKDQMEGRDIERGKLAETIRSNKAGEGLKAQSIAVSRENSLRTAGGAVPASVKEY-QYFNSL--SPEQQKTYLRVRG-RPDAGGENVVQLADGRTVTVGRKLHGAGANAFYEGIDNEGNMIRVPASSIAAPATSAANAQN----------------YEMKKDLDAISG----------ASIDD-LGFMTGITGSSGSFALGADIRSRASGVEERRLYNAAQRIMGKMQNQGIAAARDMGASGINTEAEANRYFQG-MPKPDFSSPEALQQSMRDIQ-QYTD-------NYNQQYNVNVGNGGKKSSRQQPAT-----QQSAGGSYTSKSGIQFTVE
fig|405955.9.peg.2123   Escherichia coli APEC O1     MATWQQGINSGGFLAGIGTQNENAPKASDINATLGLIRENNELARSGANNVALTGLRGLAGVADIYKQQQKQERKAAFQKGYADAYASGDREQMRNLITAFPEEFEEVRKGMGYVDDAQRDDFGNLALKAQVASSLGPGAFGRFMMDNEKEMRRLGIPPETIAEMQVNDPQGFQHFAGNLALFSLGHEKYFDIKDQMEGRDIERGKLAETIRSNKAGEGLKAQSIAVSRENSLRTAGGAVPASVKEY-QYFNSL--SPEQQKTYLRVRG-RPDAGGENVVQLADGRTVTVGRKLHGAGANAFYEGIDNEGNMIRVPASSIAAPATSAANAQN----------------YEMKKDLDAISG----------ASIDD-LGFMTGITGSSGSFALGADIRSRASGVEERRLYNAAQRIMGKMQNQGIAAARDMGASGINTEAEANRYFQG-MPKPDFSSPEALQQSMRDIQ-QYTD-------NYNQQYNVNVGNGGKKSSRQQPAT-----QQSAGGSYTSKSGIQFTVE
fig|749527.3.peg.752   Escherichia coli MS 21-1     MATWQQGINSGGFLAGIGTQNENAPKASDINATLGLIRENNELARSGANNVGLTALRGLAGVADIYKQQQQQERKAAFQKGYADAYASGDREQMRNLITAFPEEFEEVRKGMGYVDDAQRNDFGNLALKAQVASSLGPGAFGRFMMDNEKEMRRLGIPPETIAEMQVNDPQGFQHFAGNLALFSLGHEKYFDIKDQMEGRDIERGKLAETIRSNKAGEGLKAQSIAVSRENSLRTAGGAVPASVKEY-QYFNSL--SPEQQKTYLRVRG-RPDAGGENVVQLADGRTVTVGRKLHGAGANAFYEGIDNEGNMIRVPASSIAAPATSAANAQN----------------YEMKKDLDAISG----------ASIDD-LGFMTGITGSSGSFALGADIRSRASGVEERRLYNAAQRIMGKMQNQGIAAARDMGASGINTEAEANRYFQG-MPKPDFSSPEALQQSMRDIQ-QYTD-------NYNQQYNVNVGNGGKKSSRQQPAT-----QQSAGGSYTSKSGIQFTVE
Consen1   Primary consensus     MATWQlG-----gLpgmapQNdNAPrsS----------vpqpvqyqqqpNVgLmaLqGLrGVAeInqQarqQqRKAeFQKaYAgAfeSGDRnkMRsLIseyPEEFEsVqKGMGfiDDdQRnsiGhLAtsAQiASSLGtGAFGkFiaDNEdEMRRLGIsPEsvAEMhVNDPQgFQrlAGsmALFSLGHEKYFDIKDqMEGRDIERGkLAETIRSNqAGEaLqArgqdiSRaNaL-TsayAptAamqnYnQYaqmLkadPEgaaafaaaaGintnAkklmsVrenDdgTVT-----------kyYtdgseEqgklnqPiSgdgfrpialptAQkimekspegakk agfaYrvrdaLDsidtlk qlspqrvAiInnaLG-----nGtlanltL--------Sp EqqyvvNAndaIMailrqetgAai--------- pAEmskYyQmyfPqPg-dStktidtkrRkmenQfnslkaasgr YdalrvisavdrGt SSsQtlpqseqvsQpaAssnfs---sl-wg-d
Consen2   Secondary consensus          q insggf asigt  e   ka dinatlglirennelarsgan  a tg r  a   d yk qqk e   a   g  d ya    eq  n  taf     e r    yv  a  ddf n  lk  v     p    r mm   k       p  ti   q     e  hf  nl               r         r        k   g k qsiav  e s r agg vp svke -  fns --s  qqktylrvr -rpd ggenv qla gr   vgrklhgaganaf egidn gnmirv a siaapatsaan  n----------- ---- emkkd  amsg-- ------- s dd-  fmtgit ssgsfa gadirsra g  errly  aqr  gkmqnqgi sardmgasgin e  anr f g-m k dfs pealqqsm diq- ytd-------  nqqynvnvgng k   r qpat----- qs ggsytsksgiqftve

Consensus 1 (when a gap)
Conservative difference
Consensus 2 (when a gap)
Nonconservative diff.
Other character