fig|1040638.4.peg.596   Escherichia coli O104:H4 str. LB226692     MIIVAWGAGIWQDYLKTKGWQAEARLVSNWASAARSYIGKNYTTLQASSTTSTPAVITTTMLKNTGFLSSGFIETNSEGQRLQAYVVRNAQNPEL--LQAMVVSSGGTPYPVKALIQMAKDITTGLGGYIQDGKTATGALRSWSVALSNYGAKSGNGHIAVLLSTDELSGAAEDTDRLYRFQVNGRPDLNKMHTAIDMGSNNLNNIGAVNAQTGNFSGNVNGVNGTFSGQVKGNSGNFDVNVTAGGDIRSNNGWLITRNSKGWLNETHGGGFYMSDGSWVRSVNNKGIYT-----GGQVKGGTVRADGRLYTGEYLQLERTAVAGASCSPNGLVGRDNTGAILSCQSGTW--GAPKIQFTTQTYNI-AKNTRNLRLGVHAYCSWTY-LNGSPFGGFQQV---YSDQNN--VWYVSNYA-WGNYESGGTISVTCLNLPGAGA
fig|679207.4.peg.4565   Escherichia coli MS 107-1 (25-445/446)     MLLIAWGAGIWQDYIQTKGWQTEARLVSNWTSAARSYIGKNYTTLQGSSTTTTPAVITTTMLKNTGFLSSGFTETNSEGQRLQAYVVRNAQNPEL--LQAMVVSSGGTPYPVKALIQMAKDITTGLGGYIQDGKTATGALRSWSVALSNYGAKSGNGHIAVLLSTDELSGAAEDTDRLYRFQVNGRPDLNKMHTAIDMGSNNLNNVGAVNAQTGNFSGNVNGVNGTFSGQVKGNSGNFDVNVTAGGDIRSNNGWLITRNSKGWLNETHGGGFYMSDGSWVRSVNNKGIYT-----GGQVKGGTVRADGRLYTGEYLQLERTAVAGASCSPNGLVGRDNTGAILSCQSGTWKSSSASIWTNIKTFTLYPKNTQ--VLGRFKLCINTYRIDGREMAETEVVPIDMPDSNGEMTWQAKNYTQYSSY----FMKITCL       
fig|562.375.peg.5437   Escherichia coli EC4100B (32-427/428)                ENHLNNVRWQNAAEHANTYNTAVRNYVADNASTLLAGS---LPKTITPATLIQKGYLKSGFSESNFG----QSYITGIAKNSKTSRLEALTCSNGGQSLS-EAGMRSVASMIEGLGGYINSSKQAIGAGGGWSDTPSNYGLNCATGHIAMALVGADL----QESDRLYRYSITNRPDLNRMHTAIDMNSNNLNNVGTLNGNAAALSGDISARNGTFSGAISGNT------ATTNGDITSNNGWLVTKNSKGWMNSTYGGGWYMSDSSWLRSVNNKGIYT-----GGQVKGGTVRADGRLYTGEYLQLEKTATAGTSCSPNGLVGRDSTGAILSCQSGIW--TTAKVNFTTSTYNI-GKNTRNLSIGVHAYCSWTY-LNGAPFGGFQQV---YSDQNK--VWYVNNYA-WGNYESGGTITVTCLNLPGAG 
fig|340184.3.peg.1320   Escherichia coli B7A (41-404/405)                EDYLNEMRNQSAAFHADAYNTAARTYIADNNARLHSGT---LPATFTADELIRKGYLK-GLNRSPFG----QSYTTGIRRNTSTGRLEALTCSTGGENIKDDA-LRSIASLLPGLGGFIGKNGTATGVFGGWTDKPGDYGLSCNGGHIAIVMMGDDL----QESDRLYRFQVPGRPELNQMNTAINMGGNNLNNAGNINGQS----------------------------ATLKGDVTSENGWLITKNDKGWKNITYGGGFTMTDSQWIRAVGGKGIITTGEIKGGKVSGGTVRSDGRLSTGEYLQLDKTAVANTKCSPDGLVGRDSKGTILSCQSGKWRTIGGKLKVTQLSTTG--------YLGQFDFCAIAR-MGNAEDAHYCQVVESPAGSRK-----------WYKYEHKTGCIASCVTL     
fig|340184.6.peg.1390   Escherichia coli B7A (33-396/397)                EDYLNEMRNQSAAFHADAYNTAARTYIADNNARLHSGT---LPATFTADELIRKGYLK-GLNRSPFG----QSYTTGIRRNTSTGRLEALTCSTGGENIKDDA-LRSIASLLPGLGGFIGKNGTATGVFGGWTDKPGDYGLSCNGGHIAIVMMGDDL----QESDRLYRFQVPGRPELNQMNTAINMGGNNLNNAGNINGQS----------------------------ATLKGDVTSENGWLITKNDKGWKNITYGGGFTMTDSQWIRAVGGKGIITTGEIKGGKVSGGTVRSDGRLSTGEYLQLDKTAVANTKCSPDGLVGRDSKGTILSCQSGKWRTIGGKLKVTQLSTTG--------YLGQFDFCAIAR-MGNAEDAHYCQVVESPAGSRK-----------WYKYEHKTGCIASCVTL     
Consen1   Primary consensus     M   AWGAGIWeDYL tmrwQsaAfhasay tAARsYIadNnatLhags-- lPAtiTatmLinkGyLksGfnesnfg----QsYttgiaqNtst-rLeAltcSsGGtnipddA-irsaasittGLGGyIqdnkTATGafggWsdapsnYGlscnnGHIAillsgDdL----qesDRLYRFQVnGRPdLNqMhTAIdMGsNNLNNaGaiNgQs--fsg-----ngtfsg---gns------aTakGDitSnNGWLITkNsKGWkNiTyGGGFyMsDssWiRsVnnKGIyT-----GGqVkGGTVRaDGRLyTGEYLQLekTAVAgtsCSPnGLVGRDstGaILSCQSGtW--  aKi fTq ttti- knt--- LGqfafCswty-mngaefahfqQV---psdsn ---w-- nya-WgnYEskttc atCltLPGAG 
Consen2   Secondary consensus                q    ekgn  e rlvdnw s   t  gk ytr qssttt t  vf tde krt f s- l rtpsegqrl a vvrnrr pelg- q mvv t  epykvk llqmikdllp    f gkgg    vlrs tvklgd  aksgg    vvmmt e sgaaedt        p   e  k n   n  g     v nv a tgn---nvngv------qvk---gnfdvnv lg  vr e      r d   l e h    t t gq v a gg   i tgeik  k s     s    s       dr    nak   d      nk t       k rt  g l v t syng  ---rnl   vhdy aiar lgn pdggyc  vesyagqr   v-yv ---  yk  hgggi vs vn      

Consensus 1 (when a gap)
Conservative difference
Consensus 2 (when a gap)
Nonconservative diff.
Other character