fig|1040638.4.peg.567   Escherichia coli O104:H4 str. LB226692     MFKQNEKSIAQ-----IAEYIPRACRD---MQLQEAKARLEKKIALYIDDGCDAVVLNAAFAPALNSHTRKSFFSCIAAQIRKGGNQ
fig|562.375.peg.2070   Escherichia coli EC4100B     MFKQNEKSIAQ-----IAEYIPRACRD---MQLQEAKARLEKKIALYIDDGCDAAVLNAAFAPALNSHTRKSFFSCIAAQIRKGGNQ
fig|340185.4.peg.592   Escherichia coli E22     MFKQNEKSIAQ-----IAEYIPRACRG---MQLQEAKARLEKKIALYIDDGCDAAVLNAAFAPALNSHTRKSFFSCIAAQIRKGGNQ
fig|340185.3.peg.551   Escherichia coli E22     MFKQNEKSIAQ-----IAEYIPRACRG---MQLQEAKARLEKKIALYIDDGCDAAVLNAAFAPALNSHTRKSFFSCIAAQIRKGGNQ
fig|585395.4.peg.3009   Escherichia coli O103:H2 str. 12009     MFKQNEKSIAQ-----IAEYIPRTCRG---MQLQEAKARLEKKIALYIDDGCDAAVLNAAFAPALNCHTRESFFSCIAAQIHKGGNQ
fig|562.373.peg.3527   Escherichia coli 1125A     MFKQNEKSIAQ-----IAEYIPRTCRG---MQLQEAKARLEKKIALYIDDGCDAAVPNAAFAPALNCHTRESFFSCIAAQLHKGGNQ
fig|478007.5.peg.3340   Escherichia coli O157:H7 str. EC508     MFKQNEKSIAQ-----IAEYIPRTCRG---MQLQEAKARLEKKIALYIDDGCDAAVPNAAFAPALNCHTRESFFSCIAAQLHKGGNQ
fig|585396.4.peg.5884   Escherichia coli O111:H- str. 11128     MFKQNEKAIAQ-----IADYIPRACRG---MQLQEAKARLEKKIALYIDDGCDAAVLNAAFAPALNSHTRESFFSCIEAQLRKGGSQ
fig|656417.3.peg.4999   Escherichia coli M605     MFKQNEKAIAQ-----IADYIPRACRG---MQLQEAKARLEKKIALYIDDGCDAAVLNEAFAPALNSHTRESFFSCIEAQLRKGGSQ
fig|573235.3.peg.3786   Escherichia coli O26:H11 str. 11368     MFKQNEKAIAQ-----IADYIPRACRG---MQLQEAKARLEKKIALYIDDGCDAAVLNAAFAPALNSHTREAFFSRIAAQIRKGGNQ
fig|670897.3.peg.98   Escherichia coli 2362-75     MFKQNEKAIAQ-----IADYIPRACRG---MQLQEAKARLEKKIALYIDDGCDAAVLNEAFAPALNSHTRESFLSCIAAQLHQGGIQ
fig|6666666.5357.peg.2774   Escherichia coli TY-2482     MFKQNEKSIAQ-----IAEYIPRACRD---MQLQEAKARLEKKIALYIDDGCDAVVLNAAFAPALNSHTRKSFFVHRSADP      
fig|585396.4.peg.5663   Escherichia coli O111:H- str. 11128     MTSNRCREIKTPPEHIIADYILRFMKNNKEAKLYEAMSRLESKIKLFVADGHDELHIRALLNQAAHSHTKESLKQAC-ERICN    
Consen1   Primary consensus     MFKQNEKsIAQ-----IAeYIPRaCRg---MQLQEAKARLEKKIALYIDDGCDAaVlNaAFAPALNsHTReSF     AqirkGGnQ
Consen2   Secondary consensus            a          d    t  d                           v p e       c   k         lh   s 

Consensus 1 (when a gap)
Conservative difference
Consensus 2 (when a gap)
Nonconservative diff.
Other character