fig|1040638.4.peg.5506
Escherichia coli O104:H4 str. LB226692
MTGW
Q
G
R
L
LPC
A
M
PATGRENKNMAMDLR
D
P
N
VW
VS
HLLENLPE
E
KL
AS
AL
K
D
D
N
P
DWE
YI
D
GG
IVKLGSLAHSQLDIPELQ
H
RGL
V
LLASE
S
KDFRLLAHLLRTLQHAGD
P
LLA
L
R
L
LA
L
Y
V
EHYW
AV
AAPQNMAHKKRFA
S
QVIKRFE
T
G
I
DA
F
S
Q
NAAT
A
QRDALLGELAKLAQCWQ
S
HNA
P
ELA
Q
ATDDLFAL
Y
QRAF
NRA
AP
--
-
----
A
P
A
PT
P
A
A
SS
S
-
----
SP
Q
T
I
A
T
SE
SG
V
THT
S
TP
T
PQ
I
A
I
DSHDDK
T
WRDTLLKVAAILCERQPESPQGYRLRRHALW
L
TITSTPQA
K
SD
R
RTPLAA
VSA
DM
V
A
DY
Q
S
RL
A
S
ADM
E
LWQQVEKS
V
LLAPYWLDGHY
I
SAQTA
H
RLGY
TA
VADAIRDEV
V
S
FL
G
RLPAL
A
D
LLFND
H
TPFVSE
K
TKQWLA
N
QPG-
NQ
S
APV
I
Q
V
SN
E
DI
QAAR
L
CFDE
Q
GLEAALRYL
D
T
LP
A
G
E
PR
D
QFHRQ
Y
FGAQL
M
EEAG
L
VQLAQQQYRMLFR
M
GL
Q
MM
VAD
WEPSLL
E
Q
LEQKFTAEQ
fig|216592.1.peg.5069
Escherichia coli 042
MTGWHGLLRRYATPATGRENKNMAMDLRNPDVWLAHLLENLPEDKLSAALDDGNADWEFVDSEIVKLGSLAHSQLDIPELQRRGLMLLASETKDFRLLAHLLRTLQHAGDILLASRMLAQYTEHYWTCAAPQNMAHKKRFAAQVIKRFESAVQDFAGNAATIQRDALLGELAKLAQCWQAHNA
P
ELAKATDDLFALFQRAFRDVAPEM
P
SSAR
T
AAIAPQAT
A
G
S
VPDMSPHTVA
-
AQPPV
--
AATPIPQVTVDSHDDKAWRDTLLKVAAILCERQPESPQGYRLRRHALWQTITSTPQAESDGRTPLAAFPVDMMDDYLARLNNADMALWQQVEKSLLLAPYWLDGHYLSAQTALRLGYKQVADAIRDEVT
G
FLARLPALINLLFNDRTPFVSEQTKQWLASSGSVNQTAPVVQ
-
TDEELQAARACFDE
N
GLEAALRYLENLPEGDPRHQFHRQFFGAQLLEEAGMVQLAQQQYR
I
LFRTGLHMMLSEWEPSLL
E
ALEQKFTAEQ
fig|340197.3.peg.1540
Escherichia coli F11
MTGWHGLLRRYATPATGRENKNMAMDLRNPDVWLAHLLENLPEDKLSAALDDGNADWEFVDSEIVKLGSLAHSQLDIPELQRRGLMLLASETKDFRLLAHLLRTLQHAGDILLASRMLAQYTEHYWTCAAPQNMAHKKRFAAQVIKRFESAVQDFAGNAATIQRDALLGELAKLAQCWQAHNASELAKATDDLF
S
LFQRAFRDVAPEM
T
SSARSAAIAPQATTG
Y
VPDMSPHTVA
-
AQPPV
--
AATPIPQVTV
E
SHDDKAWRDTLLKVAAILCERQPESPQGYRLRRHALWQTITSTPQAESDGRTPLAAFPVDMMDDYLARLNNADMALWQQVEKSLLLAPYWLDGHYLSAQTALRLGYKQVADAIRDEVT
D
FLARLPALINLLFNDRTPFVSEQTKQWLASSGSVNQT
V
PVVQ
-
TDEELQAA
K
ACFDE
Y
GLEAALRYLENLPEGDPRHQFHRQFFGAQLLEEAGMVQLAQQQYRMLFRTGLHMMLSEWEPSLLKALEQK
L
TAEQ
fig|405955.9.peg.195
Escherichia coli APEC O1
MTGWHGLLRRYATPATGRENKNMAMDLRNPDVWLAHLLENLPEDKLSAALDDGNADWEFVDSEIVKLGSLAHSQLDIPELQRRGLMLLASETKDFRLLAHLLRTLQHAGDILLASRMLAQYTEHYWTCAAPQNMAHKKRFAAQVIKRFESAVQDFAGNAATIQRDALLGELAKLAQCWQAHNASELAKATDDLF
S
LFQRAFRDVAPEM
T
SSARSAAIAPQATTG
Y
VPDMSPHTVA
-
AQPPV
--
AATPIPQVTV
E
N
HDDKAWRDTLLKVAAILCERQPESPQGYRLRRHALWQTITSTPQAESDGRTPLAAFPVDMMDDYLARLNNADMALWQQVEKSLLLAPYWLDGHYLSAQTALRLGYKQVADAIRDEVT
D
FLARLPALINLLFNDRTPFVSEQTKQWLASSGSVNQT
V
PVVQ
-
TDEELQAA
K
ACFDE
N
GLEAALRYLENLPEGDPRHQFHRQFFGAQLLEEAGMVQLAQQQYRMLFRTGLHMMLSEWEPSLLKALEQK
L
TAEQ
Consen1
Primary consensus
MTGWHGLLRRYATPATGRENKNMAMDLRNPDVWLAHLLENLPEDKLSAALDDGNADWEFVDSEIVKLGSLAHSQLDIPELQRRGLMLLASETKDFRLLAHLLRTLQHAGDILLASRMLAQYTEHYWTCAAPQNMAHKKRFAAQVIKRFESAVQDFAGNAATIQRDALLGELAKLAQCWQAHNAsELAKATDDLFaLFQRAFRDVAPEM
SSARsAAIAPQATtG
VPDMSPHTVA
-
AQPPV
--
AATPIPQVTVdSHDDKAWRDTLLKVAAILCERQPESPQGYRLRRHALWQTITSTPQAESDGRTPLAAFPVDMMDDYLARLNNADMALWQQVEKSLLLAPYWLDGHYLSAQTALRLGYKQVADAIRDEVT
FLARLPALINLLFNDRTPFVSEQTKQWLASSGSVNQTaPVVQ
-
TDEELQAArACFDE
GLEAALRYLENLPEGDPRHQFHRQFFGAQLLEEAGMVQLAQQQYRMLFRTGLHMMLSEWEPSLLkALEQKfTAEQ
Consen2
Secondary consensus
p
s
e
v
k
e
l
Consensus 1
(when a gap)
Conservative difference
Consensus 2
(when a gap)
Nonconservative diff.
Other character