┌─ fig|1040638.4.peg.1046 O104:H4 (25-271/274) str. LB226692   
                                                                ├─ Escherichia coli (38-284/287) 042   
                                                                ├─ Escherichia coli (25-271/274) 101-1   
                                                                ├─ Escherichia coli (25-271/274) 1125A   
                                                                ├─ Escherichia coli (25-271/274) 1827-70   
                                                                ├─ Escherichia coli (25-271/274) 536   
                                                                ├─ Escherichia coli (25-271/274) 53638   
                                                                ├─ Escherichia coli (25-271/274) 55989   
                                                                ├─ Escherichia coli (38-284/287) ATCC 8739   
                                                                ├─ Escherichia coli (25-271/274) B str. REL606   
                                                                ├─ Escherichia coli (25-271/274) B185   
                                                                ├─ Escherichia coli (38-284/287) B7A   
                                                                ├─ Escherichia coli (25-271/274) BL21   
                                                                ├─ Escherichia coli (25-271/274) BW2952   
                                                                ├─ Escherichia coli (38-284/287) E110019   
                                                                ├─ Escherichia coli (25-271/274) E24377A   
                                                                ├─ Escherichia coli (25-271/274) EC4100B   
                                                                ├─ Escherichia coli (38-284/287) F11   
                                                                ├─ Escherichia coli (25-271/274) FVEC1302   
                                                                ├─ Escherichia coli (25-271/274) H591   
                                                                ├─ Escherichia coli (25-271/274) HS   
                                                                ├─ Escherichia coli (25-271/274) IAI1   
                                                                ├─ Escherichia coli (25-271/274) KO11   
                                                                ├─ Escherichia coli (25-271/274) MS 107-1   
                                                                ├─ Escherichia coli (25-271/274) MS 116-1   
                                                                ├─ Escherichia coli (25-271/274) MS 124-1   
                                                                ├─ Escherichia coli (25-271/274) MS 146-1   
                                                                ├─ Escherichia coli (25-271/274) MS 182-1   
                                                                ├─ Escherichia coli (25-271/274) MS 196-1   
                                                                ├─ Escherichia coli (25-271/274) MS 200-1   
                                                                ├─ Escherichia coli (25-271/274) MS 69-1   
                                                                ├─ Escherichia coli (25-271/274) MS 84-1   
                                                                ├─ Escherichia coli (38-284/287) O157:H7   
                                                                ├─ Escherichia coli (25-271/274) O157:H7 EDL933   
                                                                ├─ Escherichia coli (25-271/274) O157:H7 str. EC4042   
                                                                ├─ Escherichia coli (25-271/274) O157:H7 str. EC4076   
                                                                ├─ Escherichia coli (25-271/274) O157:H7 str. EC4115   
                                                                ├─ Escherichia coli (25-271/274) O157:H7 str. EC4206   
                                                                ├─ Escherichia coli (25-271/274) O157:H7 str. EC4486   
                                                                ├─ Escherichia coli (25-271/274) O157:H7 str. EC508   
                                                                ├─ Escherichia coli (25-271/274) O157:H7 str. FRIK2000   
                                                                ├─ Escherichia coli (25-271/274) O157:H7 str. Sakai   
                                                                ├─ Escherichia coli (25-271/274) O157:H7 str. TW14588   
                                                                ├─ Escherichia coli (25-271/274) O55:H7 str. CB9615   
                                                                ├─ Escherichia coli (25-271/274) SMS-3-5   
                                                                ├─ Escherichia coli (25-271/274) TA271   
                                                                ├─ Escherichia coli (25-271/274) UMN026   
                                                                ├─ Escherichia coli (25-271/274) W   
                                                                ├─ Escherichia coli (36-282/285) str. K-12 substr. DH10B   
                                                                ├─ Escherichia coli (25-271/274) str. K-12 substr. MG1655   
                                                               ┌┼─ Escherichia coli (25-271/274) str. K-12 substr. MG1655   
                                                               │├─ Escherichia coli (25-271/274) str. K-12 substr. DH10B   
                                                               │├─ Escherichia coli (25-271/274) W3110   
                                                               │├─ Escherichia coli (25-271/274) W   
                                                               │├─ Escherichia coli (25-271/274) TA280   
                                                               │├─ Escherichia coli (25-271/274) TA143   
                                                               │├─ Escherichia coli (25-271/274) SE11   
                                                               │├─ Escherichia coli (25-271/274) O26:H11 str. 11368   
                                                               │├─ Escherichia coli (25-271/274) O157:H7 str. TW14359   
                                                               │├─ Escherichia coli (25-271/274) O157:H7 str. FRIK966   
                                                               │├─ Escherichia coli (25-271/274) O157:H7 str. EC869   
                                                               │├─ Escherichia coli (25-271/274) O157:H7 str. EC4501   
                                                               │├─ Escherichia coli (25-271/274) O157:H7 str. EC4401   
                                                               │├─ Escherichia coli (25-271/274) O157:H7 str. EC4196   
                                                               │├─ Escherichia coli (25-271/274) O157:H7 str. EC4113   
                                                               │├─ Escherichia coli (25-271/274) O157:H7 str. EC4045   
                                                               │├─ Escherichia coli (25-271/274) O157:H7 str. EC4024   
                                                               │├─ Escherichia coli (38-284/287) O157:H7 EDL933   
                                                               │├─ Escherichia coli (25-271/274) O111:H- str. 11128   
                                                               │├─ Escherichia coli (25-271/274) MS 78-1   
                                                               │├─ Escherichia coli (25-271/274) MS 21-1   
                                                               │├─ Escherichia coli (25-271/274) MS 198-1   
                                                               │├─ Escherichia coli (25-271/274) MS 187-1   
                                                               │├─ Escherichia coli (25-271/274) MS 175-1   
                                                               │├─ Escherichia coli (25-271/274) MS 145-7   
                                                               │├─ Escherichia coli (25-271/274) MS 119-7   
                                                              ┌┤├─ Escherichia coli (25-271/274) MS 115-1   
                                                              ││├─ Escherichia coli (25-271/274) M718   
                                                              ││├─ Escherichia coli (38-284/287) K12   
                                                              ││├─ Escherichia coli (25-271/274) IAI1   
                                                              ││├─ Escherichia coli (38-284/287) HS   
                                                              ││├─ Escherichia coli (25-271/274) FVEC1412   
                                                              ││├─ Escherichia coli (25-271/274) F11   
                                                              ││├─ Escherichia coli (25-271/274) ETEC H10407   
                                                              ││├─ Escherichia coli (38-284/287) E24377A   
                                                              ││├─ Escherichia coli (25-271/274) E110019   
                                                              ││├─ Escherichia coli (25-271/274) DH1   
                                                              ││├─ Escherichia coli (DE3 25-271/274) BL21(DE3)   
                                                              ││├─ Escherichia coli (25-271/274) B7A   
                                                              ││├─ Escherichia coli (25-271/274) B354   
                                                              ││├─ Escherichia coli (25-271/274) B088   
                                                              ││├─ Escherichia coli (25-271/274) ATCC 8739   
                                                              ││├─ Escherichia coli (25-271/274) 55989   
                                                              ││├─ Escherichia coli (25-271/274) 536A   
                                                             ┌┤│├─ Escherichia coli (38-284/287) 53638   
                                                             │││├─ Escherichia coli (25-271/274) 536   
                                                             │││├─ Escherichia coli (25-271/274) 1212A   
                                                             │││├─ Escherichia coli (25-271/274) 1044A   
                                                             │││├─ Escherichia coli (25-271/274) 042   
                                                             │││└─ fig|6666666.5357.peg.2951 TY-2482 (25-271/274) strain   
                                                             │││┌─ Escherichia coli (25-271/274) B171   
                                                             │││├─ Escherichia coli (25-271/274) E22   
                                                             ││└┼─ Escherichia coli (25-271/274) O103:H2 str. 12009   
                                                             ││ ├─ Escherichia coli (38-284/287) E22   
                                                             ││ └─ Escherichia coli (38-284/287) B171   
                                                             ││ ┌─ Escherichia coli (25-271/274) IAI39   
                                                             ││┌┴─ Escherichia coli (25-271/274) IAI39   
                                                             │││  ┌─ Escherichia coli (25-271/274) APEC O1   
                                                             │││  ├─ Escherichia coli (25-271/274) IHE3034   
                                                             │││  ├─ Escherichia coli (25-271/274) UM146   
                                                             │││ ┌┼─ Escherichia coli (25-271/274) UTI89   
                                                             │└┤ │├─ Escherichia coli (25-271/274) UTI89   
                                                             │ │┌┤├─ Escherichia coli (25-271/274) S88   
                                                            ┌┤ │││└─ Escherichia coli (38-284/287) APEC O1   
                                                            ││ ││└┬─ Escherichia coli (25-271/274) ED1a   
                                                            ││ ││ └─ Escherichia coli (25-271/274) ED1a   
                                                            ││ ││┌─ Escherichia coli (25-271/274) 83972   
                                                            ││ └┤├─ Escherichia coli (45-291/294) CFT073   
                                                            ││  │├─ Escherichia coli (38-284/287) E2348/69   
                                                            ││  │├─ Escherichia coli (25-271/274) M605   
                                                            ││  │├─ Escherichia coli (25-271/274) MS 45-1   
                                                            ││  │├─ Escherichia coli (25-271/274) O127:H6 str. E2348/69   
                                                            ││  │├─ Escherichia coli (25-271/274) SE15   
                                  ┌─────────────────────────┤│  └┼─ Escherichia coli (25-271/274) WV_060327   
                                  │                         ││   ├─ Escherichia coli (25-271/274) TA206   
                                  │                         ││   ├─ Escherichia coli (25-271/274) O83:H1 str. NRG 857C   
                                  │                         ││   ├─ Escherichia coli (25-271/274) NC101   
                                  │                         ││   ├─ Escherichia coli (25-271/274) MS 185-1   
                                  │                         ││   ├─ Escherichia coli (25-271/274) H299   
                                  │                         ││   ├─ Escherichia coli (25-271/274) CFT073   
                                  │                         ││   ├─ Escherichia coli (25-271/274) ABU 83972   
                                  │                         ││   └─ Escherichia coli (25-271/274) 2362-75   
                                  │                         │└─ Escherichia coli (25-271/274) H736   
                                  │                         └── Escherichia coli (19-272/275) O157:H7 str. EC4024   
        ┌─────────────────────────┤                           ┌─ Escherichia coli B088   
        │                         │                           ├─ Escherichia coli MS 182-1   
        │                         │                          ┌┼─ Escherichia coli SE11   
        │                         │                          │├─ Escherichia coli MS 78-1   
        │                         │                          │└─ Escherichia coli MS 145-7   
        │                         │                          │ ┌─ Escherichia coli B171   
        │                         │                          │┌┴─ Escherichia coli (16-271/271) B171   
        │                         │                          ││    ┌─ Escherichia coli (16-271/271) ATCC 8739   
        │                         │                          ││    ├─ Escherichia coli (16-271/271) E110019   
        │                         │                          ││    ├─ Escherichia coli (16-271/271) E2348/69   
        │                         │                          ││    ├─ Escherichia coli (16-271/271) F11   
        │                         └──────────────────────────┤│    ├─ Escherichia coli (16-271/271) K12   
        │                                                    ││    ├─ Escherichia coli (16-271/271) O157:H7   
        │                                                    ││    ├─ Escherichia coli (16-271/271) O157:H7 str. EC4486   
        │                                                    ││   ┌┼─ Escherichia coli (16-271/271) str. K-12 substr. DH10B   
        │                                                    ││   │├─ Escherichia coli (16-271/271) W3110   
        │                                                    ││   │├─ Escherichia coli (16-271/271) O157:H7 EDL933   
        │                                                    ││   │├─ Escherichia coli (16-271/271) O127:H6 str. E2348/69   
        │                                                    ││  ┌┤├─ Escherichia coli (16-271/271) HS   
        │                                                    ││  ││├─ Escherichia coli (16-271/271) E24377A   
        │                                                    ││  ││├─ Escherichia coli (16-271/271) E22   
        │                                                    └┤  ││└─ Escherichia coli (16-271/271) CFT073   
        │                                                     │ ┌┤└┬─ Escherichia coli (16-270/271) SE15   
        │                                                     │ ││ └┬─ Escherichia coli (16-270/271) M605   
        │                                                     │ ││  └─ Escherichia coli (16-270/271) APEC O1   
        │                                                     │┌┤└┬─ Escherichia coli (16-271/271) 042   
        │                                                     │││ └─ Escherichia coli 042   
        │                                                     ││└┬─ Escherichia coli (16-271/271) 53638   
        │                                                     ││ └─ Escherichia coli 53638   
        │                                                     ││  ┌─ Escherichia coli FVEC1302   
        │                                                     ││  ├─ Escherichia coli MS 198-1   
        │                                                     ││ ┌┼─ Escherichia coli UMN026   
        │                                                     ││ │├─ Escherichia coli TA143   
        │                                                     ││┌┤└─ Escherichia coli FVEC1412   
        │                                                     │││└─ Escherichia coli B185   
        │                                                     │││ ┌─ Escherichia coli (1-255/256) APEC O1   
        │                                                     └┤│ ├─ Escherichia coli (1-255/256) S88   
        │                                                      ││ ├─ Escherichia coli (1-255/256) UM146   
        │                                                      ││┌┼─ Escherichia coli (1-255/256) UTI89   
        │                                                      │││├─ Escherichia coli (1-255/256) UTI89   
        │                                                      │││├─ Escherichia coli (1-255/256) TA206   
        │                                                      │││└─ Escherichia coli (1-255/256) IHE3034   
        │                                                      │││┌─ fig|6666666.5357.peg.4891 TY-2482 strain   
        │                                                      │││├─ Escherichia coli 1044A   
        │                                                      │││├─ Escherichia coli 1212A   
        │                                                      │││├─ Escherichia coli 2362-75   
        │                                                      │││├─ Escherichia coli 536   
        │                                                      └┤│├─ Escherichia coli 55989   
        │                                                       ││├─ Escherichia coli 83972   
        │                                                       ││├─ Escherichia coli ATCC 8739   
        │                                                       ││├─ Escherichia coli B354   
        │                                                       ││├─ Escherichia coli (DE3) BL21(DE3)   
        │                                                       ││├─ Escherichia coli CFT073   
        │                                                       ││├─ Escherichia coli E110019   
        │                                                       ││├─ Escherichia coli E24377A   
        │                                                       ││├─ Escherichia coli ED1a   
        │                                                       ││├─ Escherichia coli ETEC H10407   
        │                                                       ││├─ Escherichia coli H299   
        │                                                       ││├─ Escherichia coli H736   
        │                                                       ││├─ Escherichia coli IAI1   
        │                                                       ││├─ Escherichia coli KO11   
        │                                                       └┤├─ Escherichia coli MS 107-1   
        │                                                        │├─ Escherichia coli MS 116-1   
        │                                                        │├─ Escherichia coli MS 124-1   
        │                                                        │├─ Escherichia coli MS 175-1   
        │                                                        │├─ Escherichia coli MS 187-1   
        │                                                        │├─ Escherichia coli MS 200-1   
        │                                                        │├─ Escherichia coli MS 45-1   
        │                                                        │├─ Escherichia coli MS 84-1   
        │                                                        │├─ Escherichia coli O103:H2 str. 12009   
        │                                                        │├─ Escherichia coli O157:H7 EDL933   
        │                                                        │├─ Escherichia coli O157:H7 str. EC4042   
        │                                                        │├─ Escherichia coli O157:H7 str. EC4076   
        │                                                        │├─ Escherichia coli O157:H7 str. EC4115   
        │                                                        │├─ Escherichia coli O157:H7 str. EC4206   
        │                                                        │├─ Escherichia coli O157:H7 str. EC4501   
 ┌──────┤                                                        │├─ Escherichia coli O157:H7 str. EC869   
 │      │                                                        │├─ Escherichia coli O157:H7 str. FRIK966   
 │      │                                                        │├─ Escherichia coli O157:H7 str. TW14359   
 │      │                                                        │├─ Escherichia coli O26:H11 str. 11368   
 │      │                                                        │├─ Escherichia coli O83:H1 str. NRG 857C   
 │      │                                                        │├─ Escherichia coli TA271   
 │      │                                                        │├─ Escherichia coli W   
 │      │                                                        │├─ Escherichia coli WV_060327   
 │      │                                                        │├─ Escherichia coli str. K-12 substr. MG1655   
 │      │                                                        └┼─ Escherichia coli str. K-12 substr. MG1655   
 │      │                                                         ├─ Escherichia coli str. K-12 substr. DH10B   
 │      │                                                         ├─ Escherichia coli W   
 │      │                                                         ├─ Escherichia coli TA280   
 │      │                                                         ├─ Escherichia coli SMS-3-5   
 │      │                                                         ├─ Escherichia coli O55:H7 str. CB9615   
 │      │                                                         ├─ Escherichia coli O157:H7 str. TW14588   
 │      │                                                         ├─ Escherichia coli O157:H7 str. Sakai   
 │      │                                                         ├─ Escherichia coli O157:H7 str. FRIK2000   
 │      │                                                         ├─ Escherichia coli O157:H7 str. EC508   
 │      │                                                         ├─ Escherichia coli O157:H7 str. EC4401   
 │      │                                                         ├─ Escherichia coli O157:H7 str. EC4196   
 │      │                                                         ├─ Escherichia coli O157:H7 str. EC4113   
 │      │                                                         ├─ Escherichia coli O157:H7 str. EC4045   
 │      │                                                         ├─ Escherichia coli O157:H7 str. EC4024   
 │      │                                                         ├─ Escherichia coli O111:H- str. 11128   
 │      │                                                         ├─ Escherichia coli NC101   
 │      │                                                         ├─ Escherichia coli MS 69-1   
 │      │                                                         ├─ Escherichia coli MS 21-1   
 │      │                                                         ├─ Escherichia coli MS 196-1   
 │      │                                                         ├─ Escherichia coli MS 185-1   
 │      │                                                         ├─ Escherichia coli MS 146-1   
 │      │                                                         ├─ Escherichia coli MS 119-7   
 │      │                                                         ├─ Escherichia coli MS 115-1   
 │      │                                                         ├─ Escherichia coli M718   
 │      │                                                         ├─ Escherichia coli IAI1   
 │      │                                                         ├─ Escherichia coli HS   
 │      │                                                         ├─ Escherichia coli H591   
 │      │                                                         ├─ Escherichia coli F11   
 │      │                                                         ├─ Escherichia coli ED1a   
 │      │                                                         ├─ Escherichia coli EC4100B   
 │      │                                                         ├─ Escherichia coli E22   
 │      │                                                         ├─ Escherichia coli DH1   
 │      │                                                         ├─ Escherichia coli BW2952   
 │      │                                                         ├─ Escherichia coli BL21   
 │      │                                                         ├─ Escherichia coli B str. REL606   
 │      │                                                         ├─ Escherichia coli ABU 83972   
 │      │                                                         ├─ Escherichia coli 55989   
 │      │                                                         ├─ Escherichia coli 536A   
 │      │                                                         ├─ Escherichia coli 536   
 │      │                                                         ├─ Escherichia coli 1827-70   
 │      │                                                         ├─ Escherichia coli 1125A   
 │      │                                                         ├─ Escherichia coli 101-1   
 │      │                                                         └─ fig|1040638.4.peg.5211 O104:H4 str. LB226692   
 │      │                                              ┌─ Escherichia coli (13-272/282) B171   
 │      │                                              ├─ Escherichia coli (13-272/282) B7A   
 │      │                                              ├─ Escherichia coli (13-272/282) E110019   
 │      │                                              ├─ Escherichia coli (13-272/282) E22   
 │      │                                              ├─ Escherichia coli (13-272/282) E24377A   
 │      │                                              ├─ Escherichia coli (13-272/282) EC4100B   
 │      │                                              ├─ Escherichia coli (13-272/282) IAI1   
 │      │                                              ├─ Escherichia coli (13-272/282) MS 145-7   
 │      │                                              ├─ Escherichia coli (13-272/282) MS 78-1   
 │      │                                              ├─ Escherichia coli (13-272/282) O103:H2 str. 12009   
 │      │                                             ┌┼─ Escherichia coli (13-272/282) TA271   
 │      │                                             │├─ Escherichia coli (13-272/282) MS 84-1   
 │      │                                             │├─ Escherichia coli (13-272/282) MS 182-1   
 │      │                                             │├─ Escherichia coli (13-272/282) MS 124-1   
 │      │                                             │├─ Escherichia coli (13-272/282) IAI1   
 │      │                                             │├─ Escherichia coli (13-272/282) E24377A   
 │      │                                             │├─ Escherichia coli (13-272/282) E22   
 │      │                                             │├─ Escherichia coli (13-272/282) E110019   
 │      │                                             │├─ Escherichia coli (13-272/282) B7A   
 │      │                                             │└─ Escherichia coli (13-272/282) B171   
 │      │                                             │ ┌─ fig|1040638.4.peg.1654 O104:H4 (13-272/282) str. LB226692   
 │      │                                             │ ├─ Escherichia coli (13-272/282) 55989   
 │      └─────────────────────────────────────────────┤ ├─ Escherichia coli (13-272/282) B088   
 │                                                    │ ├─ Escherichia coli (13-272/282) KO11   
 │                                                    │ ├─ Escherichia coli (13-272/282) MS 119-7   
 │                                                    │ ├─ Escherichia coli (13-272/282) O26:H11 str. 11368   
 │                                                    │ ├─ Escherichia coli (13-272/282) W   
┌┤                                                    │┌┼─ Escherichia coli (13-272/282) W   
││                                                    ││├─ Escherichia coli (13-272/282) SE11   
││                                                    ││├─ Escherichia coli (13-272/282) O111:H- str. 11128   
││                                                    ││├─ Escherichia coli (13-272/282) MS 107-1   
││                                                    ││├─ Escherichia coli (13-272/282) H591   
││                                                    ││├─ Escherichia coli (13-272/282) 55989   
││                                                    ││└─ fig|6666666.5357.peg.3267 TY-2482 (13-272/282) strain   
││                                                    ││  ┌─ Escherichia coli (13-272/282) B354   
││                                                    └┤ ┌┼─ Escherichia coli (13-272/282) TA143   
││                                                     │┌┤└─ Escherichia coli (13-272/282) MS 69-1   
││                                                     ││└─ Escherichia coli (13-272/282) ETEC H10407   
││                                                     ││  ┌─ Escherichia coli (13-272/282) 101-1   
││                                                     ││  ├─ Escherichia coli (13-272/282) BL21   
││                                                     ││ ┌┼─ Escherichia coli (13-272/282) OP50   
││                                                     ││ │├─ Escherichia coli (DE3 13-272/282) BL21(DE3)   
││                                                     ││┌┤└─ Escherichia coli (13-272/282) B str. REL606   
││                                                     └┤│└─ Escherichia coli (13-272/282) M605   
││                                                      ││┌─ Escherichia coli (13-272/282) MS 21-1   
││                                                      │││┌─ Escherichia coli (13-272/282) 042   
││                                                      │││├─ Escherichia coli (13-272/282) 2362-75   
││                                                      │││├─ Escherichia coli (13-272/282) 536   
││                                                      │││├─ Escherichia coli (13-272/282) 53638   
││                                                      │││├─ Escherichia coli (13-272/282) ABU 83972   
││                                                      └┤│├─ Escherichia coli (13-272/282) APEC O1   
││                                                       ││├─ Escherichia coli (13-272/282) ATCC 8739   
││                                                       ││├─ Escherichia coli (13-272/282) CFT073   
││                                                       ││├─ Escherichia coli (13-272/282) DH1   
││                                                       ││├─ Escherichia coli (13-272/282) ED1a   
││                                                       ││├─ Escherichia coli (13-272/282) F11   
││                                                       ││├─ Escherichia coli (13-272/282) FVEC1302   
││                                                       ││├─ Escherichia coli (13-272/282) H299   
││                                                       ││├─ Escherichia coli (13-272/282) HS   
││                                                       └┤├─ Escherichia coli (13-272/282) IAI39   
││                                                        │├─ Escherichia coli (13-272/282) IHE3034   
││                                                        │├─ Escherichia coli (13-272/282) MS 115-1   
││                                                        │├─ Escherichia coli (13-272/282) MS 146-1   
││                                                        │├─ Escherichia coli (13-272/282) MS 185-1   
││                                                        │├─ Escherichia coli (13-272/282) MS 198-1   
││                                                        │├─ Escherichia coli (13-272/282) MS 45-1   
││                                                        │├─ Escherichia coli (13-272/282) O127:H6 str. E2348/69   
││                                                        │├─ Escherichia coli (13-272/282) S88   
││                                                        │├─ Escherichia coli (13-272/282) SMS-3-5   
││                                                        │├─ Escherichia coli (13-272/282) TA280   
││                                                        │├─ Escherichia coli (13-272/282) UMN026   
││                                                        │├─ Escherichia coli (13-272/282) UTI89   
││                                                        │├─ Escherichia coli (13-272/277) WV_060327   
││                                                        │├─ Escherichia coli (13-272/282) str. K-12 substr. DH10B   
││                                                        └┼─ Escherichia coli (13-272/282) str. K-12 substr. MG1655   
││                                                         ├─ Escherichia coli (13-272/282) str. K-12 substr. MG1655   
││                                                         ├─ Escherichia coli (13-272/282) str. K-12 substr. DH10B   
││                                                         ├─ Escherichia coli (13-272/282) W3110   
││                                                         ├─ Escherichia coli (13-272/282) UTI89   
││                                                         ├─ Escherichia coli (13-272/282) UM146   
││                                                         ├─ Escherichia coli (13-272/282) TA206   
││                                                         ├─ Escherichia coli (13-272/282) SE15   
││                                                         ├─ Escherichia coli (13-272/282) O83:H1 str. NRG 857C   
││                                                         ├─ Escherichia coli (13-272/282) NC101   
││                                                         ├─ Escherichia coli (13-272/282) MS 200-1   
││                                                         ├─ Escherichia coli (13-272/282) MS 196-1   
││                                                         ├─ Escherichia coli (13-272/282) MS 175-1   
││                                                         ├─ Escherichia coli (13-272/282) MS 116-1   
││                                                         ├─ Escherichia coli (13-272/282) K12   
┤│                                                         ├─ Escherichia coli (13-272/282) IAI39   
││                                                         ├─ Escherichia coli (13-272/282) HS   
││                                                         ├─ Escherichia coli (13-272/282) H736   
││                                                         ├─ Escherichia coli (13-272/282) FVEC1412   
││                                                         ├─ Escherichia coli (13-272/282) F11   
││                                                         ├─ Escherichia coli (13-272/282) ED1a   
││                                                         ├─ Escherichia coli (13-272/282) E2348/69   
││                                                         ├─ Escherichia coli (13-272/282) CFT073   
││                                                         ├─ Escherichia coli (13-272/282) BW2952   
││                                                         ├─ Escherichia coli (13-272/282) ATCC 8739   
││                                                         ├─ Escherichia coli (13-272/282) APEC O1   
││                                                         ├─ Escherichia coli (13-272/282) 83972   
││                                                         ├─ Escherichia coli (13-272/282) 53638   
││                                                         ├─ Escherichia coli (13-272/282) 536   
││                                                         ├─ Escherichia coli (13-272/282) 1827-70   
││                                                         └─ Escherichia coli (13-272/282) 042   
││                                     ┌─ Escherichia coli (5-252/252) K12   
││                                     ├─ Escherichia coli (5-252/252) str. K-12 substr. MG1655   
│└─────────────────────────────────────┼─ Escherichia coli (5-252/252) str. K-12 substr. MG1655   
│                                      ├─ Escherichia coli (5-252/252) W3110   
│                                      └─ Escherichia coli (5-252/252) DH1   
│                                                      ┌─ Escherichia coli (10-250/255) 101-1   
│                                                      ├─ Escherichia coli (10-250/255) 536   
│                                                      ├─ Escherichia coli (39-279/284) APEC O1   
│                                                      ├─ Escherichia coli (10-250/255) BL21   
│                                                      ├─ Escherichia coli (10-250/255) ED1a   
│                                                      ├─ Escherichia coli (39-279/284) F11   
│                                                      ├─ Escherichia coli (10-250/255) H299   
│                                                      ├─ Escherichia coli (10-250/255) IAI39   
│                                                      ├─ Escherichia coli (10-250/255) MS 187-1   
│                                                      ├─ Escherichia coli (10-250/255) NC101   
│                                                      ├─ Escherichia coli (10-250/255) S88   
│                                                      ├─ Escherichia coli (10-250/255) SMS-3-5   
│                                                      ├─ Escherichia coli (10-250/255) UTI89   
│                                                     ┌┼─ Escherichia coli (10-250/255) UTI89   
│                                                     │├─ Escherichia coli (10-250/255) UM146   
│                                                     │├─ Escherichia coli (10-250/255) SE15   
│                                                     │├─ Escherichia coli (10-250/255) O83:H1 str. NRG 857C   
│                                                     │├─ Escherichia coli (10-250/255) MS 200-1   
│                                                     │├─ Escherichia coli (10-250/255) IHE3034   
│                                                     │├─ Escherichia coli (10-250/255) IAI39   
│                                                    ┌┤├─ Escherichia coli (10-250/255) F11   
│                                                    ││├─ Escherichia coli (10-250/255) ED1a   
│                                                    ││├─ Escherichia coli (DE3 10-250/255) BL21(DE3)   
│                                                    ││├─ Escherichia coli (10-250/255) B str. REL606   
│                                                    ││├─ Escherichia coli (10-250/255) APEC O1   
│   ┌────────────────────────────────────────────────┤│└─ Escherichia coli (10-250/255) 536   
│   │                                                │└┬─ Escherichia coli (10-250/255) M605   
│   │                                                │ └─ Escherichia coli (10-250/255) MS 21-1   
│   │                                                │┌─ Escherichia coli (10-250/255) ABU 83972   
│   │                                                │├─ Escherichia coli (10-250/255) CFT073   
│   │                                                └┼─ Escherichia coli (10-250/255) MS 45-1   
│   │                                                 ├─ Escherichia coli (10-250/255) MS 185-1   
│   │                                                 ├─ Escherichia coli (39-279/284) CFT073   
│   │                                                 └─ Escherichia coli (10-250/255) 83972   
│   │                                                                ┌─ Escherichia coli (1-252/262) 1827-70   
│   │                                                                ├─ Escherichia coli (1-252/262) DH1   
│   │                                                                ├─ Escherichia coli (1-252/262) FVEC1412   
│   │                                                                ├─ Escherichia coli (1-252/262) M718   
│   │                                                                ├─ Escherichia coli (1-252/262) MS 196-1   
│   │                                                                ├─ Escherichia coli (1-252/262) S88   
│   │                                                                ├─ Escherichia coli (1-252/262) W3110   
│   │                                                                ├─ Escherichia coli (1-252/262) str. K-12 substr. DH10B   
└───┤                                                               ┌┼─ Escherichia coli (1-252/262) str. K-12 substr. MG1655   
    │                                                               │├─ Escherichia coli (1-252/262) str. K-12 substr. MG1655   
    │                                                               │├─ Escherichia coli (1-252/262) str. K-12 substr. DH10B   
    │                                                               │├─ Escherichia coli (1-252/262) UMN026   
    │                                                               │├─ Escherichia coli (1-252/262) MS 198-1   
    │         ┌─────────────────────────────────────────────────────┤├─ Escherichia coli (1-252/262) MS 146-1   
    │         │                                                     │├─ Escherichia coli (1-252/262) K12   
    │         │                                                     │├─ Escherichia coli (1-252/262) FVEC1302   
    │         │                                                     │└─ Escherichia coli (1-252/262) BW2952   
    │         │                                                     └┬─ Escherichia coli (1-252/262) SE15   
    │         │                                                      └─ Escherichia coli (1-252/262) MS 145-7   
    │         │                                             ┌─ Escherichia coli (9-253/260) 536   
    │         │                                             ├─ Escherichia coli (9-253/260) 83972   
    │         │                                             ├─ Escherichia coli (9-253/260) CFT073   
    │         │                                             ├─ Escherichia coli (9-253/260) F11   
    │         │                                             ├─ Escherichia coli (9-253/260) MS 185-1   
    │         │                                             ├─ Escherichia coli (9-253/260) MS 45-1   
    └─────────┤                                            ┌┼─ Escherichia coli (9-253/260) O83:H1 str. NRG 857C   
              │                                            │├─ Escherichia coli (9-253/260) MS 200-1   
              │                                            │├─ Escherichia coli (9-253/260) F11   
              │                                            │├─ Escherichia coli (9-253/260) CFT073   
              │                                            │├─ Escherichia coli (9-253/260) ABU 83972   
              │                                           ┌┤└─ Escherichia coli (9-253/260) 536   
              │                                           ││┌─ Escherichia coli (9-253/260) APEC O1   
              │                                           ││├─ Escherichia coli (9-253/260) NC101   
              │                                           ││├─ Escherichia coli (9-253/260) UM146   
              │                                           │└┼─ Escherichia coli (9-253/260) UTI89   
              │                                           │ ├─ Escherichia coli (9-253/260) UTI89   
              │                                           │ ├─ Escherichia coli (9-253/260) S88   
              └───────────────────────────────────────────┤ ├─ Escherichia coli (9-253/260) IHE3034   
                                                          │ └─ Escherichia coli (9-253/260) APEC O1   
                                                          │┌─ Escherichia coli (9-253/260) TA206   
                                                          ││   ┌─ Escherichia coli (9-253/260) 2362-75   
                                                          ││   ├─ Escherichia coli (9-253/260) O127:H6 str. E2348/69   
                                                          ││  ┌┼─ Escherichia coli (9-253/260) WV_060327   
                                                          ││ ┌┤└─ Escherichia coli (9-253/260) E2348/69   
                                                          └┤ │└┬─ Escherichia coli (9-253/260) SE15   
                                                           │┌┤ └─ Escherichia coli (9-253/260) M605   
                                                           ││└┬─ Escherichia coli (9-253/260) ED1a   
                                                           ││ └─ Escherichia coli (9-253/260) ED1a   
                                                           ││ ┌─ Escherichia coli (9-253/260) IAI39   
                                                           ││┌┼─ Escherichia coli (9-253/260) MS 21-1   
                                                           └┤│└─ Escherichia coli (9-253/260) IAI39   
                                                            ││┌─ Escherichia coli (9-253/260) 1827-70   
                                                            │││  ┌─ Escherichia coli (9-253/260) 101-1   
                                                            │││  ├─ Escherichia coli (9-253/260) 53638   
                                                            │││  ├─ Escherichia coli (9-253/260) ATCC 8739   
                                                            └┤│  ├─ Escherichia coli (9-253/260) BL21   
                                                             ││  ├─ Escherichia coli (9-253/260) BW2952   
                                                             ││  ├─ Escherichia coli (9-253/260) H736   
                                                             ││  ├─ Escherichia coli (9-253/260) HS   
                                                             ││  ├─ Escherichia coli (9-253/260) MS 146-1   
                                                             ││  ├─ Escherichia coli (9-253/260) MS 196-1   
                                                             ││  ├─ Escherichia coli (9-253/260) W3110   
                                                             └┤  ├─ Escherichia coli (9-253/260) str. K-12 substr. DH10B   
                                                              │ ┌┼─ Escherichia coli (9-253/260) str. K-12 substr. MG1655   
                                                              │ │├─ Escherichia coli (9-253/260) str. K-12 substr. MG1655   
                                                              │ │├─ Escherichia coli (9-253/260) str. K-12 substr. DH10B   
                                                              │ │├─ Escherichia coli (9-253/260) OP50   
                                                              │ │├─ Escherichia coli (9-253/260) MS 187-1   
                                                              │ │├─ Escherichia coli (9-253/260) K12   
                                                              │┌┤├─ Escherichia coli (9-253/260) HS   
                                                              │││├─ Escherichia coli (9-253/260) DH1   
                                                              │││├─ Escherichia coli (DE3 9-253/260) BL21(DE3)   
                                                              │││├─ Escherichia coli (9-253/260) B str. REL606   
                                                              └┤│├─ Escherichia coli (9-253/260) ATCC 8739   
                                                               ││└─ Escherichia coli (9-253/260) 53638   
                                                               │└─ Escherichia coli (9-253/260) MS 115-1   
                                                               │┌─ Escherichia coli (9-253/260) ETEC H10407   
                                                               ││ ┌─ Escherichia coli (9-253/260) B354   
                                                               └┤┌┼─ Escherichia coli (9-253/260) TA280   
                                                                ││└─ Escherichia coli (9-253/260) MS 69-1   
                                                                └┤┌─ Escherichia coli (9-253/260) B185   
                                                                 ││┌─ Escherichia coli (9-253/260) M718   
                                                                 │││┌─ Escherichia coli (9-253/260) 1125A   
                                                                 └┤│├─ Escherichia coli (9-253/260) 536A   
                                                                  ││├─ Escherichia coli (9-253/260) O157:H7 EDL933   
                                                                  ││├─ Escherichia coli (9-253/260) O157:H7 str. EC4024   
                                                                  ││├─ Escherichia coli (9-253/260) O157:H7 str. EC4045   
                                                                  └┤├─ Escherichia coli (9-253/260) O157:H7 str. EC4113   
                                                                   │├─ Escherichia coli (9-253/260) O157:H7 str. EC4196   
                                                                   │├─ Escherichia coli (9-253/260) O157:H7 str. EC4401   
                                                                   │├─ Escherichia coli (9-253/260) O157:H7 str. EC4501   
                                                                   │├─ Escherichia coli (9-253/260) O157:H7 str. EC869   
                                                                   │├─ Escherichia coli (9-253/260) O157:H7 str. FRIK966   
                                                                   │├─ Escherichia coli (9-253/260) O157:H7 str. TW14359   
                                                                   └┼─ Escherichia coli (9-253/260) O55:H7 str. CB9615   
                                                                    ├─ Escherichia coli (9-253/260) O157:H7 str. TW14588   
                                                                    ├─ Escherichia coli (9-253/260) O157:H7 str. Sakai   
                                                                    ├─ Escherichia coli (9-253/260) O157:H7 str. FRIK2000   
                                                                    ├─ Escherichia coli (9-253/260) O157:H7 str. EC508   
                                                                    ├─ Escherichia coli (9-253/260) O157:H7 str. EC4486   
                                                                    ├─ Escherichia coli (9-253/260) O157:H7 str. EC4206   
                                                                    ├─ Escherichia coli (9-253/260) O157:H7 str. EC4115   
                                                                    ├─ Escherichia coli (9-253/260) O157:H7 str. EC4076   
                                                                    ├─ Escherichia coli (9-253/260) O157:H7 str. EC4042   
                                                                    ├─ Escherichia coli (9-253/260) O157:H7 EDL933   
                                                                    ├─ Escherichia coli (9-253/260) O157:H7   
                                                                    ├─ Escherichia coli (9-253/260) 1212A   
                                                                    └─ Escherichia coli (9-253/260) 1044A   
  
Acetate operon repressor (132)
Negative regulator of allantoin and glyoxylate utilization operons (127)
Transcriptional regulator, IclR family (106)
Uncharacterized transcriptional regulator YfaX, HTH-type (89)
D-galactonate regulator, IclR family (34)
Hypothetical transcriptional regulator yiaJ (21)
Others (6)