fig|1040638.4.peg.5200   Escherichia coli O104:H4 str. LB226692                                               MDEQWGYVGAKSRQRWLFTRMTGSGRRLLRTYSVNARWRRWGVL
fig|216592.3.peg.5041   Escherichia coli 042     MSRQCTHYGRWPQHGFTSLKKLRPQSVTSRIQPGSDVIICAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVATSSVNALWPHWSVF
fig|331111.12.peg.5141   Escherichia coli E24377A                                         MIICAEMDEQWGYVGAKSRQRWLFYAYDRLRKTVVATSSVNALWPHWSVF
Consen1   Primary consensus                                          IICAEMDEQWGYVGAKSRQRWLFYAYDR RRTVVATSSVNALWPHWSVF
Consen2   Secondary consensus                                                                                           

Consensus 1 (when a gap)
Conservative difference
Consensus 2 (when a gap)
Nonconservative diff.
Other character