fig|1040638.4.peg.480   Escherichia coli O104:H4 str. LB226692     MIKDNSKADDSADRLSFTETLFVAHSILPDLTQTKTKENDCYLLFKKSVILSI
fig|216592.1.peg.3812   Escherichia coli 042 (4-56/56)     MIKDNSKVDDSADRLSFTVTLFVANSILPDLTQTKTKENDCYLLFKKSVILSI
Consen1   Primary consensus     MIKDNSK DDSADRLSFT TLFVA SILPDLTQTKTKENDCYLLFKKSVILSI
Consen2   Secondary consensus                                                          

Consensus 1 (when a gap)
Conservative difference
Consensus 2 (when a gap)
Nonconservative diff.
Other character