┌─ Escherichia coli K12 (85)  
                                            ┌┴─ Escherichia coli 2362-75 (10)  
                                           ┌┴┬─ Escherichia coli WV_060327   
                                          ┌┤ └─ fig|1040638.4.peg.4684 O104:H4 str. LB226692 (23)  
                                          │└┬─ Escherichia coli FVEC1302 (4)  
                                         ┌┤ └─ Escherichia coli MS 124-1 (1)  
                           ┌─────────────┤└─ Escherichia coli UM146 (2)  
                           │             └─ Escherichia coli SMS-3-5   
   ┌───────────────────────┤                            ┌─ fig|1040638.4.peg.675 O104:H4 (1-253/260) str. LB226692 (7)  
   │                       └───────────────────────────┬┴─ Escherichia coli (1-253/260) MS 200-1   
   │                                                   └┬─ Escherichia coli (1-253/260) MS 200-1   
   │                                                    └┬─ Escherichia coli (1-253/260) ED1a (6)  
┌──┤                                                     └┬─ Escherichia coli (1-253/260) MS 107-1   
│  │                                                      └┬─ Escherichia coli (1-253/260) 83972 (7)  
│  │                                                       └─ Escherichia coli (1-253/260) 536 (3)  
│  └──────────────────────────────────┬─ Escherichia coli (1-235/260) MS 145-7 (1)  
│                                     └─ Escherichia coli (1-235/260) K12 (20)  
│                                               ┌─ Escherichia coli (2-249/252) 101-1 (3)  
│                                              ┌┴─ Escherichia coli (2-249/252) B str. REL606   
│                                             ┌┴─ Escherichia coli (2-249/252) 1827-70 (7)  
│                                            ┌┴─ Escherichia coli (2-249/252) K12 (62)  
│                                           ┌┴┬─ Escherichia coli (2-249/252) DH1   
│                                          ┌┤ └─ Escherichia coli (2-249/252) MS 78-1   
│                                         ┌┤└─ Escherichia coli (2-249/252) B185   
│                                        ┌┤└─ Escherichia coli (2-249/252) 1044A (25)  
│                                       ┌┤└─ Escherichia coli (16-266/269) APEC O1 (1)  
│                                      ┌┤└─ Escherichia coli (2-249/252) 2362-75 (24)  
│                           ┌──────────┤└─ Escherichia coli (16-266/269) E2348/69   
│                           │          └── Escherichia coli (2-249/252) O157:H7 str. EC4024   
│                           │                     ┌─ Escherichia coli (19-263/269) K12 (70)  
│             ┌─────────────┤                    ┌┴─ Escherichia coli (11-255/261) E24377A (1)  
│             │             │                  ┌─┴─ Escherichia coli (11-255/261) M605   
┤             │             │              ┌───┴── Escherichia coli (11-255/266) O157:H7 str. EC4024   
│             │             └──────────────┤    ┌─ Escherichia coli (4-255/262) O83:H1 str. NRG 857C   
│             │                            └────┤ ┌─ fig|1040638.4.peg.1285 O104:H4 (4-255/262) str. LB226692 (24)  
│     ┌───────┤                                 └┬┴─ Escherichia coli (4-255/262) EC4100B   
│     │       │                                  └┬─ Escherichia coli (11-255/262) E2348/69 (1)  
│     │       │                                   └┬─ Escherichia coli (4-255/262) 536 (4)  
│     │       │                                    └─ Escherichia coli (4-255/262) 2362-75 (8)  
│     │       │                             ┌─ Escherichia coli (4-252/252) 1827-70 (2)  
│     │       └─────────────────────────────┤┌─ Escherichia coli (4-252/252) MS 187-1   
│     │                                     └┤┌─ Escherichia coli (4-252/252) E110019 (1)  
│     │                                      ││ ┌─ Escherichia coli (4-252/252) M718   
│     │                                      └┤┌┴─ fig|1040638.4.peg.3838 O104:H4 (4-252/252) str. LB226692 (76)  
│     │                                       ││   ┌─ Escherichia coli (4-252/252) M605   
│     │                                       └┤  ┌┴─ Escherichia coli (7-240/240) SMS-3-5   
│     │                                        │ ┌┴─ Escherichia coli (4-252/252) SE15   
│     │                                        │┌┴─ Escherichia coli (7-240/240) O127:H6 str. E2348/69 (1)  
│     │                                        └┤ ┌─ Escherichia coli (4-252/252) 042 (1)  
│     │                                         └┬┴─ Escherichia coli (4-252/252) TA206   
│     │                                          └┬─ Escherichia coli (4-252/252) O157:H7 str. EC508   
│     │                                           └┬─ Escherichia coli (7-240/240) str. K-12 substr. DH10B   
└─────┤                                            └┬─ Escherichia coli (7-240/240) B088   
      │                                             └┬─ Escherichia coli (4-252/252) E24377A (1)  
      │                                              └─ Escherichia coli (4-252/252) K12 (16)  
      │                                   ┌─ Escherichia coli (5-231/257) M718   
      │                                  ┌┴─ Escherichia coli (5-231/257) 1044A (50)  
      │                                 ┌┴─ Escherichia coli (5-231/257) K12 (55)  
      │                                ┌┴─ Escherichia coli (5-231/257) ETEC H10407   
      │            ┌───────────────────┴─ fig|1040638.4.peg.2569 O104:H4 (5-231/257) str. LB226692 (18)  
      │         ┌──┴────────────────────┬─ Escherichia coli (7-257/259) APEC O1 (4)  
      │         │                       └┬─ Escherichia coli (7-257/259) 042 (9)  
      │   ┌─────┤                        └─ Escherichia coli (7-257/259) O157:H7 (1)  
      │   │     │                ┌─ Escherichia coli (13-246/269) TA280   
      │   │     └────────────────┤┌─ Escherichia coli (17-246/269) 53638 (1)  
      │   │                      └┤ ┌─ Escherichia coli (13-246/269) MS 182-1 (1)  
      │   │                       └┬┴─ Escherichia coli (13-246/269) E24377A (1)  
      │   │                        └┬─ Escherichia coli (13-246/269) K12 (115)  
      │   │                         └┬─ Escherichia coli (13-246/269) O111:H- str. 11128 (1)  
      │   │                          └─ Escherichia coli (13-246/274) 2362-75 (1)  
      └───┤                                        ┌─ fig|1040638.4.peg.2605 O104:H4 (5-231/255) str. LB226692 (32)  
          │                                       ┌┴─ Escherichia coli (5-231/255) MS 84-1   
          │                                      ┌┴─ Escherichia coli (15-241/265) K12 (29)  
          │                                     ┌┴┬─ Escherichia coli (5-231/255) IHE3034   
          │                                     │ └┬─ Escherichia coli (5-231/255) H299   
          │                                    ┌┤  └─ Escherichia coli (5-231/255) 2362-75 (13)  
          │             ┌──────────────────────┤└─ Escherichia coli (5-231/255) 536 (10)  
          │    ┌────────┤                      └─ Escherichia coli (5-231/255) NC101   
          │    │        └───────────────────┬─ Escherichia coli (4-221/243) 2362-75 (21)  
          └────┤                            └─ Escherichia coli (6-231/253) APEC O1 (4)  
               │      ┌─────────────────────────────────────────────── Escherichia coli (10-249/251) E2348/69   
               └──────┤                              ┌─ Escherichia coli (4-226/249) B354   
                      └──────────────────────────────┤┌─ fig|6666666.5357.peg.2961 TY-2482 (4-226/249) strain   
                                                     └┤┌─ Escherichia coli (4-226/249) UTI89 (1)  
                                                      └┤┌─ Escherichia coli (4-226/249) SE11   
                                                       └┤┌─ Escherichia coli (4-226/249) 83972 (5)  
                                                        └┤┌─ Escherichia coli (4-226/249) E24377A (1)  
                                                         └┤┌─ Escherichia coli (4-226/249) IAI1 (1)  
                                                          └┤┌─ Escherichia coli (4-226/249) K12 (99)  
                                                           └┤ ┌─ Escherichia coli (7-216/239) B088   
                                                            └┬┴─ Escherichia coli (4-226/249) MS 107-1   
                                                             └┬─ Escherichia coli (4-233/249) E2348/69   
                                                              └┬─ Escherichia coli (7-223/239) 2362-75   
                                                               └─ Escherichia coli (7-216/239) H591 (10)  
  
Putative HTH-type transcriptional regulator YdjF (15)
Glycerol-3-phosphate regulon repressor, DeoR family (12)
Transcriptional regulatory protein YciT (12)
Deoxyribose operon repressor, DeoR family (12)
DeoR-type transcriptional regulator YihW (9)
Transcriptional repressor of aga operon (7)
Hypothetical transcriptional regulator ygbI (4)
Glucitol operon repressor (4)
Galactitol utilization operon repressor (3)
Putative transcriptional regulator YgbI, DeoR family (3)
Putative regulatory protein (2)
Glycerol-3-phosphate regulon repressor (2)
Putative deoxyribose operon repressor (1)
Ascorbate utilization transcriptional regulator UlaR, HTH-type (1)
Others (7)