fig|1040638.4.peg.448
Escherichia coli O104:H4 str. LB226692
MGKNQEERKTP
I
IVVKKRRTF
SP
PSLSEK
TD
II
APVF
TE
QTA
ES
A
P
A
GI
N
SSAV
-----
ETH
I
PEAPA
--------------
R
KKKKK
-------
R
H
RF
P
RPSHWT
R
EYTHECVEKIKA
L
FPHLRAEGGGFIPLKIGI
N
ND
IS
AFLAEHPETELTMDEW
L
CAVSCIT
S
R
R
VYLQRTAVAG
V
PRYGLDG
H
P
K
GQVSD
SE
A
QS
A
GRR
L
ATL
EQ
KL
-
LR
M
Q
AQ
QENISGQ
fig|656393.3.peg.12
Escherichia coli H299
MGKNQEERKTPVIVVKKRRTF
SP
PSLSEK
TD
II
APVF
TE
QTA
ES
A
P
A
GI
N
SSAV
-----
ETH
I
PEAPA
--------------
R
KKKKK
-------
R
H
RF
P
RPSHWT
R
EYTHECVEKIKA
L
FPHLRAEGGGFIPLKIGI
N
ND
IS
AFLAEHPETELTMDEW
L
CAVSCIT
S
R
R
VYLQRTAVAG
V
PRYGLDG
H
P
K
GQVSD
SE
A
QS
A
GRR
L
ATL
EQ
KW
-
LR
M
Q
AQ
QENISGQ
fig|749550.3.peg.4133
Escherichia coli MS 200-1
MGKNQEERKTPVIVVKKRRTF
SP
PSLSEK
TD
II
APVF
TE
QTA
ES
A
P
A
GI
N
SSAV
-----
ETH
I
PEAPA
--------------
R
KKKKK
-------
R
H
RF
P
RPSHWT
R
EYTHECVEKIKA
L
FPHLRAEGGGFIPLKIGI
N
ND
IS
AFLAEHPETELTMDEW
L
CAVSCIT
S
R
R
VYLQRTAVAG
V
PRYGLDG
H
P
K
GQVSD
SE
A
QS
A
GRR
L
ATL
EQ
KW
-
LR
M
Q
AQ
QENISGQ
fig|749527.3.peg.4067
Escherichia coli MS 21-1
MGKNQEERKTPVIVVKKRRTF
SP
PSLSEK
TD
II
APVF
TE
QTA
ES
A
P
A
GI
N
SSAV
-----
ETH
I
PEAPA
--------------
R
KKKKK
-------
R
H
RF
P
RPSHWT
R
EYTHECVEKIKA
L
FPHLRAEGGGFIPLKIGI
N
ND
IS
AFLAEHPETELTMDEW
L
CAVSCIT
S
R
R
VYLQRTAVAG
V
PRYGLDG
H
P
K
GQVSD
SE
A
QS
A
GRR
L
ATL
EQ
KW
-
LR
M
Q
AQ
QENISGQ
fig|340184.3.peg.1338
Escherichia coli B7A
MGK
Y
QEERKTPVIVVKKRRTF
SP
PSLSEK
TD
II
APVF
TE
QTA
ES
A
P
A
GI
N
SSAV
-----
ETH
I
PEAPA
--------------
R
KKKKK
-------
R
H
RF
P
RPSHWT
R
EYTHECVEKIKA
L
FPHLRAEGGGFIPLKIGI
N
ND
IS
AFLAEHPETELTMDEW
L
CAVSCIT
S
R
R
VYLQRTAVAG
V
PRYGLDG
H
P
K
GQVSD
SE
A
QS
A
GRR
L
ATL
EQ
KW
-
LR
M
Q
AQ
QENISGQ
fig|340184.6.peg.1410
Escherichia coli B7A
MGK
Y
QEERKTPVIVVKKRRTF
SP
PSLSEK
TD
II
APVF
TE
QTA
ES
A
P
A
GI
N
SSAV
-----
ETH
I
PEAPA
--------------
R
KKKKK
-------
R
H
RF
P
RPSHWT
R
EYTHECVEKIKA
L
FPHLRAEGGGFIPLKIGI
N
ND
IS
AFLAEHPETELTMDEW
L
CAVSCIT
S
R
R
VYLQRTAVAG
V
PRYGLDG
H
P
K
GQVSD
SE
A
QS
A
GRR
L
ATL
EQ
KW
-
LR
M
Q
AQ
QENISGQ
fig|478004.5.peg.4972
Escherichia coli O157:H7 str. EC4401 (17-216/216)
MGKNQEERKTPVIVVKKRRTF
SP
PSLSEK
TD
II
APVF
TE
QTA
ES
A
P
A
GI
N
SSAV
-----
ETH
I
PEAPA
--------------
R
KKKKK
-------
R
H
RF
P
RPSHWT
R
EYTHECVEKIKA
L
FPHLRAEGGGFIPLKIGI
S
ND
IS
AFLAEHPETELTMDEW
L
CAVSCIT
S
R
R
VYLQRTAVAG
V
PRYGLDG
H
P
K
GQVSD
SE
A
QS
A
GRR
L
ATL
EQ
KW
-
LR
T
Q
AQ
QENISGQ
fig|595495.4.peg.3687
Escherichia coli KO11
MGKNQEERKTPVIVVKKRRTF
SP
PSLSEK
TD
II
TPVF
TE
QTA
ES
A
P
A
GI
N
SSAV
-----
ETH
I
PEAPA
--------------
R
KKKKK
-------
R
H
RF
P
RPSHWT
R
EYTHECVEKIKA
L
FPHLRAEGGGFIPLKIGI
N
ND
IS
AFLAEHPETELTMDEW
L
CAVSCIT
S
R
R
VYLQRTAVAG
V
PRYGLDG
H
P
K
GQVSD
SE
A
QS
A
GRR
L
ATL
EQ
KW
-
LR
T
Q
AQ
QENISGQ
fig|566546.3.peg.3397
Escherichia coli W
MGKNQEERKTPVIVVKKRRTF
SP
PSLSEK
TD
II
TPVF
TE
QTA
ES
A
P
A
GI
N
SSAV
-----
ETH
I
PEAPA
--------------
R
KKKKK
-------
R
H
RF
P
RPSHWT
R
EYTHECVEKIKA
L
FPHLRAEGGGFIPLKIGI
N
ND
IS
AFLAEHPETELTMDEW
L
CAVSCIT
S
R
R
VYLQRTAVAG
V
PRYGLDG
H
P
K
GQVSD
SE
A
QS
A
GRR
L
ATL
EQ
KW
-
LR
T
Q
AQ
QENISGQ
fig|566546.4.peg.4779
Escherichia coli W
MGKNQEERKTPVIVVKKRRTF
SP
PSLSEK
TD
II
TPVF
TE
QTA
ES
A
P
A
GI
N
SSAV
-----
ETH
I
PEAPA
--------------
R
KKKKK
-------
R
H
RF
P
RPSHWT
R
EYTHECVEKIKA
L
FPHLRAEGGGFIPLKIGI
N
ND
IS
AFLAEHPETELTMDEW
L
CAVSCIT
S
R
R
VYLQRTAVAG
V
PRYGLDG
H
P
K
GQVSD
SE
A
QS
A
GRR
L
ATL
EQ
KW
-
LR
T
Q
AQ
QENISGQ
fig|656408.3.peg.52
Escherichia coli H591
MGKNQEERKTPVIVVKKRRTF
SP
PSLSEK
TD
II
APVF
TE
QTA
ES
A
P
A
GI
N
SSAV
-----
ETH
I
PEAPA
--------------
R
KKKKK
-------
R
H
RF
P
RPSHWT
R
EYTHECVEKIKA
L
FPHLRAEGGGFIPLKIGI
S
ND
IS
AFLAEHPETELTMDEW
L
CAVSCIT
S
R
R
VYLQRTAVAG
V
PRYGLDG
H
P
K
GQVSD
SE
A
QS
A
GRR
L
ATL
EQ
KW
-
LR
T
Q
AQ
QENISGQ
fig|444454.5.peg.438
Escherichia coli O157:H7 str. EC4024
MGKNQEERK
P
PVIVVKKRRTF
SP
PSLSEK
KD
II
APVF
TE
RTA
ES
A
P
A
GI
N
SSAV
-----
ETH
I
PEAPA
--------------
R
KKKKK
-------
R
H
RF
S
RPSHWT
R
EYTHECVEKIKA
Q
FPHLRAEGGGFIPLKIGI
S
ND
IS
AFLAEHPETELTMDEW
L
CAVSCIT
S
R
R
VYLQRTAVAG
V
PRYGLDG
H
P
K
GQVS
E
SE
A
QS
A
GRR
L
VIL
EQ
KW
-
LR
M
Q
AQ
QENIS
E
Q
fig|749548.3.peg.3988
Escherichia coli MS 196-1 (1-194/197)
MGKNQEERKTPVIVVKKRRTF
SL
PSLSEK
TD
II
APVF
TE
QTA
ES
A
P
A
GI
N
SSAV
-----
ETH
I
PEAPA
--------------
R
KKKKK
-------
R
H
RF
P
RPSHWT
R
EYTHECVEKIKA
L
FPHLRAEGGGFIPLKIGI
N
ND
IS
AFLAE
S
P
D
TEL
S
MDEW
F
CAVSCIT
S
R
R
VYLQRT
S
VAG
V
PRYGLDG
H
P
D
GQVS
E
TE
A
QS
A
VQR
L
AII
EQ
RW
-
LR
M
K
ER
Q
fig|701177.3.peg.5323
Escherichia coli O55:H7 str. CB9615 (1-194/197)
MGKNQEERKTPVIVVKKRRTF
SP
PSLSEK
TD
II
APVF
TE
QTA
ES
A
P
A
GI
N
SSAV
-----
ETH
I
PEAPA
--------------
R
KKKKK
-------
R
H
RF
P
RPSHWT
R
EYTHECVEKIKA
L
FPHLRAEGGGFIPLKIGI
S
ND
IS
AFLAE
S
P
D
TEL
S
MDEW
F
CAVSCIT
S
R
R
VYLQRT
S
VAG
V
PRYGLDG
H
P
D
GQVS
E
TE
A
QS
A
VQR
L
AII
EQ
RW
-
LR
M
K
ER
Q
fig|679205.4.peg.4151
Escherichia coli MS 124-1 (1-195/205)
MGK
Y
QEE
K
KTP
I
I
M
VKKRRT
L
LP
PSLSEK
TG
V
I
ARSE
TE
KME
ES
V
S
E
GI
S
S
P
AV
-----
D
TH
T
P
D
APA
--------------
C
KKKKK
-------
R
R
RF
P
R
QP
HWT
H
E
F
TH
D
CVEK
V
K
S
L
FPHLRAEGGGF
L
PLKIGI
T
ND
FA
AFL
T
EHPETELT
L
DEW
S
CA
I
SCIT
T
R
Q
VYLQRTAVAG
I
PRYGLDG
L
P
A
GQVS
E
CD
A
LN
A
RRW
L
AVR
EQ
QK
-
L
K
M
K
TM
QE
fig|749533.3.peg.2797
Escherichia coli MS 84-1 (1-195/205)
MGK
Y
QEE
K
KTP
I
I
M
VKKRRT
L
LP
PSLSEK
TG
V
I
ARSE
TE
KME
ES
V
S
E
GI
S
S
P
AV
-----
D
TH
T
P
D
APA
--------------
C
KKKKK
-------
R
R
RF
P
R
QP
HWT
H
E
F
TH
D
CVEK
V
K
S
L
FPHLRAEGGGF
L
PLKIGI
T
ND
FA
AFL
T
EHPETELT
L
DEW
S
CA
I
SCIT
T
R
Q
VYLQRTAVAG
I
PRYGLDG
L
P
A
GQVS
E
CD
A
LN
A
RRW
L
AVR
EQ
QK
-
L
K
M
K
TM
QE
fig|685038.3.peg.4576
Escherichia coli O83:H1 str. NRG 857C (1-195/205)
MGK
Y
QEE
K
KTP
I
I
M
VKKRRT
L
LP
PSLSEK
TG
V
I
ARSE
TE
KME
ES
V
S
E
GI
S
S
P
AV
-----
D
TH
T
P
D
APA
--------------
C
KKKKK
-------
R
R
RF
P
R
QP
HWT
H
E
F
TH
D
CVEK
V
K
S
L
FPHLRAEGGGF
L
PLKIGI
T
ND
FA
AFL
T
EHPETELT
L
DEW
S
CA
I
SCIT
T
R
Q
VYLQRTAVAG
I
PRYGLDG
L
P
A
GQVS
E
CD
A
LN
A
RRW
L
AVR
EQ
QK
-
L
K
M
K
TM
QE
fig|439855.10.peg.151
Escherichia coli SMS-3-5 (1-195/205)
MGK
Y
QEE
K
KTP
I
I
M
VKKRRT
L
LP
PSLSEK
TG
V
I
ARSE
TE
KME
ES
V
S
E
GI
S
S
P
AV
-----
D
TH
T
P
D
APA
--------------
C
KKKKK
-------
R
R
RF
P
R
QP
HWT
H
E
F
TH
D
CVEK
V
K
S
L
FPHLRAEGGGF
L
PLKIGI
T
ND
FA
AFL
T
EHPETELT
L
DEW
S
CA
I
SCIT
T
R
Q
VYLQRTAVAG
I
PRYGLDG
L
P
A
GQVS
E
CD
A
LN
A
RRW
L
AVR
EQ
QK
-
L
K
M
K
TM
QE
fig|585397.6.peg.127
Escherichia coli ED1a (6-195/217)
K
K
P
S
PV
VII
KK
K
R
RI
--
-
-
LS
H
Q
DD
A
V
----
--
---
QA
V
P
D
D
I
K
P
A
P
V
M
E
F
K
T
DS
L
S
PE
I
PA
TVAGSPEQQKKTGR
K
KKKKK
-------
N
N
R
-
-
----
W
N
H
E
F
IRHS
LD
C
V
K
K
T
FP
Q
LRAE
E
GG
Y
HAF
KIGI
S
K
D
VM
AF
IS
AS
PE
CG
LT
V
K
EW
S
CAV
RM
IT
G
G
Y
K
YLQR
I
S
V
S
G
T
PRYGLDG
K
V
H
G
T
V
TE
EE
A
LY
A
QAK
L
EKH
T
Q
RY
N
A
R
M
K
ET
E
D
fig|585397.9.peg.5254
Escherichia coli ED1a (6-195/217)
K
K
P
S
PV
VII
KK
K
R
RI
--
-
-
LS
H
Q
DD
A
V
----
--
---
QA
V
P
D
D
I
K
P
A
P
V
M
E
F
K
T
DS
L
S
PE
I
PA
TVAGSPEQQKKTGR
K
KKKKK
-------
N
N
R
-
-
----
W
N
H
E
F
IRHS
LD
C
V
K
K
T
FP
Q
LRAE
E
GG
Y
HAF
KIGI
S
K
D
VM
AF
IS
AS
PE
CG
LT
V
K
EW
S
CAV
RM
IT
G
G
Y
K
YLQR
I
S
V
S
G
T
PRYGLDG
K
V
H
G
T
V
TE
EE
A
LY
A
QAK
L
EKH
T
Q
RY
N
A
R
M
K
ET
E
D
fig|562.373.peg.631
Escherichia coli 1125A (8-196/198)
S
M
QPK
KTPVIVVKKRR
VL
VM
P
----
E
NP
VV
----
--
---
NE
K
P
Q
EV
Q
K
SAV
NENK
-
K
VQ
K
KD
A
V
A
--------------
E
K
TR
KK
QPQPWYLK
K
QI
T
F
P
PKYP
K
EY
FE
K
C
FN
K
VR
A
V
FP
E
L
WTDEKKNL
PLK
S
GI
L
Q
D
VE
KY
LA
D
N
P
DVD
LT
I
E
EW
N
CAV
QVM
T
F
R
W
Q
YLQ
NC
T
V
P
G
A
T
RY
D
L
Y
G
K
P
A
G
T
V
K
K
AH
A
TY
A
QLV
L
D--
--
--
-
A
R
K
K
AS
EKKQLKR
fig|562.375.peg.5396
Escherichia coli EC4100B (8-196/198)
S
M
QPK
KTPVIVVKKRR
VL
VM
P
----
E
NP
VV
----
--
---
NE
K
P
Q
EV
Q
K
SAV
NENK
-
K
VQ
K
KD
A
V
A
--------------
E
K
TR
KK
QPQPWYLK
K
QI
T
F
P
PKYP
K
EY
FE
K
C
FN
K
VR
A
V
FP
E
L
WTDEKKNL
PLK
S
GI
L
Q
D
VE
KY
LA
D
N
P
DVD
LT
I
E
EW
N
CAV
QVM
T
F
R
W
Q
YLQ
NC
T
V
P
G
A
T
RY
D
L
Y
G
K
P
A
G
T
V
K
K
AH
A
TY
A
QLV
L
D--
--
--
-
A
R
K
K
AS
EKKQLKR
fig|749540.3.peg.4493
Escherichia coli MS 146-1 (2-188/190)
QPK
KTPVIVVKKRR
VL
VM
P
----
E
NP
VV
----
--
---
NE
K
P
Q
EV
Q
K
SAV
NENK
-
K
VQ
K
KD
A
V
A
--------------
E
K
TR
KK
QPQPWYLK
K
QI
T
F
P
PKYP
K
EY
FE
K
C
FN
K
VR
A
V
FP
E
L
WTDEKKNL
PLK
S
GI
L
Q
D
VE
KY
LA
D
N
P
DVD
LT
I
E
EW
N
CAV
QVM
T
F
R
W
Q
YLQ
NC
T
V
P
G
A
T
RY
D
L
Y
G
K
P
A
G
T
V
K
K
AH
A
TY
A
QLV
L
D--
--
--
-
A
R
K
K
AS
EKKQLKR
fig|637388.3.peg.3443
Escherichia coli O157:H7 str. FRIK2000 (2-188/190)
QPK
KTPVIVVKKRR
VL
VM
P
----
E
NP
VV
----
--
---
NE
K
P
Q
EV
Q
K
SAV
NENK
-
K
VQ
K
KD
A
V
A
--------------
E
K
T
H
KK
QPQPWYLK
K
QI
T
F
P
PKYP
K
EY
FE
K
C
FN
K
VR
A
V
FP
E
L
WTDEKKNL
PLK
S
GI
L
Q
D
VE
KY
LA
D
N
P
DVD
LT
I
E
EW
N
CAV
QVM
T
F
R
W
Q
YLQ
NC
T
V
P
G
A
T
RY
D
L
Y
G
K
P
A
G
T
V
K
K
AH
A
TY
A
QLV
L
D--
--
--
-
A
R
K
K
AS
EKKQLKR
Consen1
Primary consensus
MGKnQeerKtPvIvVKKRRtf
Pslsek
ii
te
es
p
gi
ssAV
-----
eth
peApA
--------------
KkkKK
-------
r
rf
rpshwt
EytheCveKika
FPhLraegggfiPLKiGI
nD
afLaehPeteLTmdEW
CAvsciT
R
vYLQrtaVaG
pRYgLdG
P
GqVsd
A
A
L
eq
-
lr
q
qenisgq
Consen2
Secondary consensus
y
qpk
s
i
m
vl
----
e
vv
--
ne
s
ev
kp
nenk
vq
kd
v
tr
qpqpwylk
qi
fqpkyp
ffe
fn
vrs
e
wtdekknl
s
q
ky
td
dvd
e
iqvm
q
nc
p
t
d
y
t
k
--
ak
k
ekkqlkr
Consensus 1
(when a gap)
Conservative difference
Consensus 2
(when a gap)
Nonconservative diff.
Other character