fig|1040638.4.peg.4334   Escherichia coli O104:H4 str. LB226692 (3-66/66)     mcH----------CMVPGASRVNSVPAPESAIIPYTYSLIXPPHRGFTMPVSF----------------------------NKLPANQT--------TVNRLNCEVFKNFS-----------------R                                                 
fig|749538.3.peg.2142   Escherichia coli MS 116-1                   M-------NSVPAPESAIIPYTYSLITPPHRGIHHAKFF----------------------------NKLPAGQT--------IIASLNYEQ-RGIL-----------------REN----CFLQ                                       
fig|679205.4.peg.515   Escherichia coli MS 124-1                   M-------NSVPAPESAIIPYTYSLITPPHRGIHHAKFF----------------------------NKLPAGQT--------IIASLNYEQ-RGIL-----------------REN----CFLQ                                       
fig|749533.3.peg.709   Escherichia coli MS 84-1                   M-------NSVPAPESAIIPYTYSLITPPHRGIHHAKFF----------------------------NKLPAGQT--------IIASLNYEQ-RGIL-----------------REN----CFLQ                                       
fig|83334.1.peg.1572   Escherichia coli O157:H7 (3-166/166)     maK------HGAGCLP-----VNSVPAPESAIIPYTWLLIAPPHRGIRHAVVFLINSKQKNQALCRLFLFITGHSNTTMPQTSPPSASTDMILLVKSTITTRNSRS-AATARRSFTVTGNSPDEDPEHRQSLPAPCALPAQFRRLPPQWPPPHPAHLPLHAYRVSHPRSHVTPHDDQF
fig|83334.1.peg.3495   Escherichia coli O157:H7 (3-109/109)     mfACTFFFLHGAGCLP-----VNSVSAPESAIITYTWLLIAPPHRGIHHAVVFLINSKQKNQALCRLFLFITGHSNTTMPQTRAPSVSTNIILLVKSIITITKSRI-TTAS-----------------RHSL                                              
Consen1   Primary consensus     M  ------HGAGCm-------NSVPAPESAIIPYTysLItPPHRGI HAkfF----------------------------nk Pa qT  ------iIa  Nye -   l-----------------Ren----CFLQ                                       
Consen2   Secondary consensus                   lp     v              wl  a         vv linskqknqalcrlflfitghsnttmpqt   s s   illvkst t   sr     s                   sl                                              

Consensus 1 (when a gap)
Conservative difference
Consensus 2 (when a gap)
Nonconservative diff.
Other character