┌─ Escherichia coli (170-278/278) ETEC H10407   
                                  ┌┴─ Escherichia coli (154-262/262) 1827-70   
                                 ┌┴─ Escherichia coli (170-278/278) K12 (72)  
                                ┌┴┬─ Escherichia coli (170-278/278) 042 (16)  
                               ┌┤ └─ Escherichia coli (170-278/278) H299   
               ┌───────────────┤└─ Escherichia coli (170-278/278) 1044A (28)  
               │               └┬─ Escherichia coli (170-278/278) E24377A (1)  
        ┌──────┤                └─ Escherichia coli (170-278/278) E22 (9)  
        │      └────────────────────────┬─ Escherichia coli (225-317/319) 042 (1)  
        │                               └┬─ Escherichia coli (218-310/312) FVEC1302 (6)  
        │                                └┬─ Escherichia coli (218-310/312) TA143   
    ┌───┤                                 └┬─ Escherichia coli (218-310/312) K12 (120)  
    │   │                                  └┬─ Escherichia coli (188-280/282) 2362-75   
    │   │                                   └─ Escherichia coli (218-310/312) IAI39 (1)  
    │   └────┬──────────────────────────────── Escherichia coli (32-117/130) O157:H7 str. EC4024   
    │        └────────────────────┬───────────────── Escherichia coli (206-312/317) B185 (23)  
┌───┤                             └─────────┬────────── Escherichia coli (224-322/330) 1044A (25)  
│   │                                       └───── Escherichia coli (230-329/331) O157:H7 str. EC4024   
│   │                                             ┌─ Escherichia coli (180-279/303) K12 (116)  
│   │                       ┌─────────────────────┴─ Escherichia coli (180-279/303) B185   
│   └─────────┬─────────────┴──────────────────── Escherichia coli (129-242/255) ED1a (1)  
│             └──────────────────────────────┬─ Escherichia coli (186-298/299) 536 (1)  
│                                            └┬─ Escherichia coli (186-298/299) OP50   
│                                             └─ Escherichia coli (262-374/375) K12 (129)  
│                                   ┌─ Escherichia coli (184-279/285) K12 (91)  
│                                  ┌┴─ Escherichia coli (184-279/285) MS 196-1   
│                                 ┌┴─ Escherichia coli (184-279/285) O157:H7 str. FRIK966   
│                                ┌┴┬─ Escherichia coli (184-279/285) APEC O1 (6)  
│                               ┌┤ └─ Escherichia coli (184-279/285) TA280   
┤                               │└┬─ Escherichia coli (184-279/285) MS 21-1 (1)  
│      ┌────────────────────────┤ └─ Escherichia coli (184-279/285) B185   
│      │                        └┬─ Escherichia coli (184-279/285) SE15   
│      │                         └─ Escherichia coli (184-279/285) 536 (14)  
│  ┌───┤        ┌────────────────────────── Escherichia coli (252-351/351) 101-1 (9)  
│  │   │ ┌──────┴──────────────────────── Escherichia coli (199-292/304) 2362-75 (16)  
│  │   └─┤                                            ┌─ Escherichia coli (280-389/392) K12 (131)  
│  │     └─────────────┬──────────────────────────────┴─ Escherichia coli (280-389/392) MS 116-1   
│┌─┤                   └───────────────┬─────────────── Escherichia coli (139-233/254) TA206   
││ │                                   └───────────────┬─── Escherichia coli (147-235/240) B str. REL606 (3)  
││ │                                                   └───── Escherichia coli (144-232/243) FVEC1302 (3)  
││ └──────┬────────────────── Escherichia coli (2-99/103) O157:H7 str. EC4024   
││        └────────────────────────────────┬─ Escherichia coli (178-300/302) B171 (4)  
││                                         └┬─ Escherichia coli (178-300/302) SMS-3-5   
└┤                                          └┬─ Escherichia coli (178-300/302) K12 (124)  
 │                                           └┬─ Escherichia coli (178-300/302) MS 69-1   
 │                                            └─ Escherichia coli (178-300/302) O157:H7 EDL933 (1)  
 │                                 ┌─ Escherichia coli (195-293/297) O111:H- str. 11128   
 │                                ┌┴─ Escherichia coli (199-297/301) K12 (48)  
 │  ┌─────────────────────────────┴─ Escherichia coli (195-293/297) 1827-70 (9)  
 │  │        ┌─────────────────── Escherichia coli (2-105/114) TA206   
 └──┤        │                          ┌─ Escherichia coli (3-129/129) K12 (98)  
    │        │                         ┌┴─ Escherichia coli MS 124-1   
    └────────┤                        ┌┴─ Escherichia coli (3-129/129) APEC O1 (24)  
             │        ┌───────────────┴─ Escherichia coli (1-124/126) O157:H7 str. EC4024   
             │        │                    ┌─ Escherichia coli (7-104/107) 83972 (1)  
             │        │                   ┌┴─ Escherichia coli (7-104/107) K12 (127)  
             └────────┤    ┌──────────────┴─ Escherichia coli (7-104/107) MS 200-1   
                      │  ┌─┴───────┬─ Escherichia coli (7-104/289) 2362-75 (25)  
                      │  │         └─ Escherichia coli (7-104/289) K12 (105)  
                      └──┤             ┌─ Escherichia coli (30-131/138) 55989 (7)  
                         │  ┌──────────┴─ Escherichia coli (30-131/138) MS 175-1   
                         └──┤┌─────────────────────────────────────── Escherichia coli (7-103/114) MS 21-1   
                            └┤       ┌─────────────── Escherichia coli (5-104/268) TA280   
                             │       │                    ┌───── Escherichia coli (6-105/286) E24377A   
                             └───────┤                ┌───┴──── Escherichia coli (3-109/287) 101-1   
                                     │    ┌───────────┴──┬────── Escherichia coli (48-152/331) E22 (1)  
                                     └────┤              └──────── Escherichia coli (2-114/279) TA271   
                                          └────┬─────────── Escherichia coli (5-104/294) SE11   
                                               └──┬─────────────── Escherichia coli (3-112/276) SE11   
                                                  └────────┬─ Escherichia coli (7-104/285) 1044A (9)  
                                                           └┬─ Escherichia coli (18-115/296) B171 (6)  
                                                            └┬─ Escherichia coli (18-115/239) K12 (45)  
                                                             └─ Escherichia coli (7-104/285) 2362-75 (29)  
  
Putative HTH-type transcriptional regulator ypdC (9)
Transcriptional regulator, AraC family (8)
L-rhamnose operon regulatory protein RhaS (8)
Right origin-binding protein (7)
L-rhamnose operon transcriptional activator RhaR (6)
Melibiose operon regulatory protein (5)
Multiple antibiotic resistance protein MarA (4)
Transcriptional regulator YkgA (4)
Regulatory protein SoxS (3)
Hypothetical transcriptional regulator YqhC (3)
regulatory protein for 2-phenylethylamine catabolism (3)
Xylose activator XylR (AraC family) (2)
Putative AraC-family transcriptional regulatory protein (2)
putative AraC-like transcriptional regulator (1)
Hypothetical transcriptional regulator ykgA (1)
putative transcription regulator (1)
HTH-type transcriptional regulator gadW (1)
DNA-binding response regulator, AraC family (1)
Propanediol utilization transcriptional activator (1)
Transcriptional activator ramA (1)
Others (2)