┌─ fig|1040638.4.peg.4061 O104:H4 (12-168/185) str. LB226692   
                                                       ├─ Escherichia coli (12-168/185) 042   
                                                       ├─ Escherichia coli (12-168/185) 101-1   
                                                       ├─ Escherichia coli (12-168/185) 53638   
                                                       ├─ Escherichia coli (12-168/185) 55989   
                                                       ├─ Escherichia coli (12-168/185) ATCC 8739   
                                                       ├─ Escherichia coli (12-168/185) B str. REL606   
                                                       ├─ Escherichia coli (12-168/185) B171   
                                                       ├─ Escherichia coli (12-168/185) B185   
                                                       ├─ Escherichia coli (12-168/185) B7A   
                                                       ├─ Escherichia coli (12-168/185) BL21   
                                                       ├─ Escherichia coli (12-168/185) BW2952   
                                                       ├─ Escherichia coli (12-168/185) E110019   
                                                       ├─ Escherichia coli (12-168/185) E22   
                                                       ├─ Escherichia coli (12-168/185) E24377A   
                                                       ├─ Escherichia coli (12-168/185) EC4100B   
                                                       ├─ Escherichia coli (12-168/185) FVEC1302   
                                                       ├─ Escherichia coli (12-168/185) H299   
                                                       ├─ Escherichia coli (12-168/185) HS   
                                                       ├─ Escherichia coli (12-168/185) IAI1   
                                                       ├─ Escherichia coli (12-168/185) IAI39   
                                                       ├─ Escherichia coli (12-168/185) K12   
                                                       ├─ Escherichia coli (12-168/185) M718   
                                                       ├─ Escherichia coli (12-168/185) MS 115-1   
                                                       ├─ Escherichia coli (12-168/185) MS 119-7   
                                                       ├─ Escherichia coli (12-168/185) MS 145-7   
                                                       ├─ Escherichia coli (12-168/185) MS 175-1   
                                                       ├─ Escherichia coli (12-168/185) MS 187-1   
                                                       ├─ Escherichia coli (12-168/185) MS 198-1   
                                                       ├─ Escherichia coli (12-168/185) MS 69-1   
                                                       ├─ Escherichia coli (12-168/185) MS 84-1   
                                                       ├─ Escherichia coli (12-168/185) O111:H- str. 11128   
                                                       ├─ Escherichia coli (12-168/185) OP50   
                                                       ├─ Escherichia coli (12-168/185) SMS-3-5   
                                                       ├─ Escherichia coli (12-168/185) TA271   
                                                       ├─ Escherichia coli (12-168/185) UMN026   
                                                       ├─ Escherichia coli (12-168/185) W   
                                                       ├─ Escherichia coli (12-168/185) str. K-12 substr. DH10B   
                                                       ├─ Escherichia coli (12-168/185) str. K-12 substr. MG1655   
                                                      ┌┼─ Escherichia coli (12-168/185) str. K-12 substr. MG1655   
                                                      │├─ Escherichia coli (12-168/185) str. K-12 substr. DH10B   
                                                      │├─ Escherichia coli (12-168/185) W3110   
                                                      │├─ Escherichia coli (12-168/185) W   
                                                      │├─ Escherichia coli (12-168/185) TA280   
                                                      │├─ Escherichia coli (12-168/185) TA143   
                                                      │├─ Escherichia coli (12-168/185) SE11   
                                                      │├─ Escherichia coli (12-168/185) O26:H11 str. 11368   
                                                      │├─ Escherichia coli (12-168/185) O103:H2 str. 12009   
                                                      │├─ Escherichia coli (12-168/185) MS 78-1   
                                                      │├─ Escherichia coli (12-168/185) MS 21-1   
                                                      │├─ Escherichia coli (12-168/185) MS 196-1   
                                                      │├─ Escherichia coli (12-168/185) MS 182-1   
                                                      │├─ Escherichia coli (12-168/185) MS 146-1   
                                                      │├─ Escherichia coli (12-168/185) MS 124-1   
                                                      │├─ Escherichia coli (12-168/185) MS 116-1   
                                                      │├─ Escherichia coli (12-168/185) MS 107-1   
                                                      │├─ Escherichia coli (12-168/185) KO11   
                                                      │├─ Escherichia coli (12-168/185) IAI39   
                                                      │├─ Escherichia coli (12-168/185) IAI1   
                                                      │├─ Escherichia coli (12-168/185) HS   
                                                      │├─ Escherichia coli (12-168/185) H736   
                                                      │├─ Escherichia coli (12-168/185) FVEC1412   
┌─────────────────────────────────────────────────────┤├─ Escherichia coli (12-168/185) ETEC H10407   
│                                                     │├─ Escherichia coli (12-168/185) E24377A   
│                                                     │├─ Escherichia coli (12-168/185) E22   
│                                                     │├─ Escherichia coli (12-168/185) E110019   
│                                                     │├─ Escherichia coli (12-168/185) DH1   
│                                                     │├─ Escherichia coli (DE3 12-168/185) BL21(DE3)   
│                                                     │├─ Escherichia coli (12-168/185) B7A   
│                                                     │├─ Escherichia coli (12-168/185) B354   
│                                                     │├─ Escherichia coli (12-168/185) B171   
│                                                     │├─ Escherichia coli (12-168/185) B088   
│                                                     │├─ Escherichia coli (12-168/185) ATCC 8739   
│                                                     │├─ Escherichia coli (12-168/185) 55989   
│                                                     │├─ Escherichia coli (12-168/185) 53638   
│                                                     │├─ Escherichia coli (12-168/185) 1827-70   
│                                                     │├─ Escherichia coli (12-168/185) 042   
│                                                     │└─ fig|6666666.5357.peg.3277 TY-2482 (12-168/185) strain   
│                                                     │ ┌─ Escherichia coli (1-157/174) O157:H7 str. EC4024   
│                                                     │┌┴─ Escherichia coli (1-157/174) O157:H7 str. EC4486   
│                                                     ││┌─ Escherichia coli (12-168/185) 1125A   
│                                                     ││├─ Escherichia coli (12-168/185) 536A   
│                                                     ││├─ Escherichia coli (12-168/185) O157:H7 EDL933   
│                                                     ││├─ Escherichia coli (12-168/185) O157:H7 str. EC4042   
│                                                     ││├─ Escherichia coli (12-168/185) O157:H7 str. EC4076   
│                                                     └┤├─ Escherichia coli (12-168/185) O157:H7 str. EC4115   
┤                                                      │├─ Escherichia coli (12-168/185) O157:H7 str. EC4206   
│                                                      │├─ Escherichia coli (12-168/185) O157:H7 str. EC4501   
│                                                      │├─ Escherichia coli (12-168/185) O157:H7 str. EC869   
│                                                      │├─ Escherichia coli (12-168/185) O157:H7 str. FRIK966   
│                                                      │├─ Escherichia coli (12-168/185) O157:H7 str. TW14359   
│                                                      └┼─ Escherichia coli (12-168/185) O55:H7 str. CB9615   
│                                                       ├─ Escherichia coli (12-168/185) O157:H7 str. TW14588   
│                                                       ├─ Escherichia coli (12-168/185) O157:H7 str. Sakai   
│                                                       ├─ Escherichia coli (12-168/185) O157:H7 str. FRIK2000   
│                                                       ├─ Escherichia coli (12-168/185) O157:H7 str. EC508   
│                                                       ├─ Escherichia coli (12-168/185) O157:H7 str. EC4401   
│                                                       ├─ Escherichia coli (12-168/185) O157:H7 str. EC4196   
│                                                       ├─ Escherichia coli (12-168/185) O157:H7 str. EC4113   
│                                                       ├─ Escherichia coli (12-168/185) O157:H7 str. EC4045   
│                                                       ├─ Escherichia coli (12-168/185) O157:H7 EDL933   
│                                                       ├─ Escherichia coli (12-168/185) O157:H7   
│                                                       ├─ Escherichia coli (12-168/185) 1212A   
│                                                       └─ Escherichia coli (12-168/185) 1044A   
│                                                ┌─────────────────── Escherichia coli (2-175/175) O157:H7 str. EC4024   
│                                                │   ┌─ Escherichia coli MS 21-1   
│                                                │   │     ┌─ Escherichia coli MS 69-1   
│                                                │   │    ┌┴─ Escherichia coli TA280   
│                                                │   │   ┌┴─ Escherichia coli B354   
│                                                │   │  ┌┴┬─ Escherichia coli B185   
│                                                │   │ ┌┤ └─ Escherichia coli H299   
└────────────────────────────────────────────────┤   │ │└┬─ Escherichia coli NC101   
                                                 │   │ │ └┬─ Escherichia coli 042   
                                                 │   │┌┤  └─ Escherichia coli 042   
                                                 │   │││┌─ Escherichia coli 53638   
                                                 │   ││└┼─ Escherichia coli TA143   
                                                 │   ││ ├─ Escherichia coli M718   
                                                 │   ││ └─ Escherichia coli 53638   
                                                 └───┤│     ┌─ Escherichia coli 536   
                                                     ││     ├─ Escherichia coli 83972   
                                                     ││     ├─ Escherichia coli CFT073   
                                                     ││     ├─ Escherichia coli F11   
                                                     ││     ├─ Escherichia coli MS 185-1   
                                                     ││     ├─ Escherichia coli MS 45-1   
                                                     ││    ┌┼─ Escherichia coli WV_060327   
                                                     ││    │├─ Escherichia coli TA206   
                                                     ││    │├─ Escherichia coli MS 200-1   
                                                     ││    │├─ Escherichia coli F11   
                                                     ││   ┌┤├─ Escherichia coli CFT073   
                                                     ││   ││├─ Escherichia coli ABU 83972   
                                                     ││   ││└─ Escherichia coli 536   
                                                     └┤   ││ ┌─ Escherichia coli ED1a   
                                                      │  ┌┤└┬┴─ Escherichia coli ED1a   
                                                      │  ││ └┬─ Escherichia coli E2348/69   
                                                      │  ││  └─ Escherichia coli 2362-75   
                                                      │  │└─ Escherichia coli SE15   
                                                      │ ┌┤┌─ Escherichia coli IHE3034   
                                                      │ ││├─ Escherichia coli S88   
                                                      │ ││├─ Escherichia coli UTI89   
                                                      │ │└┼─ Escherichia coli UTI89   
                                                      │ │ ├─ Escherichia coli UM146   
                                                      │┌┤ ├─ Escherichia coli O83:H1 str. NRG 857C   
                                                      │││ └─ Escherichia coli APEC O1   
                                                      │││┌─ Escherichia coli FVEC1412   
                                                      │││├─ Escherichia coli MS 198-1   
                                                      ││└┼─ Escherichia coli UMN026   
                                                      ││ ├─ Escherichia coli M605   
                                                      ││ └─ Escherichia coli FVEC1302   
                                                      ││┌─ Escherichia coli MS 115-1   
                                                      │││ ┌─ Escherichia coli 1044A   
                                                      └┤│ ├─ Escherichia coli 1212A   
                                                       ││ ├─ Escherichia coli O157:H7   
                                                       ││ ├─ Escherichia coli O157:H7 EDL933   
                                                       ││ ├─ Escherichia coli O157:H7 str. EC4042   
                                                       ││ ├─ Escherichia coli O157:H7 str. EC4076   
                                                       ││ ├─ Escherichia coli O157:H7 str. EC4115   
                                                       ││ ├─ Escherichia coli O157:H7 str. EC4206   
                                                       ││ ├─ Escherichia coli O157:H7 str. EC4486   
                                                       ││ ├─ Escherichia coli O157:H7 str. EC508   
                                                       ││ ├─ Escherichia coli O157:H7 str. FRIK2000   
                                                       └┤ ├─ Escherichia coli O157:H7 str. Sakai   
                                                        │ ├─ Escherichia coli O157:H7 str. TW14588   
                                                        │┌┼─ Escherichia coli O55:H7 str. CB9615   
                                                        ││├─ Escherichia coli O157:H7 str. TW14359   
                                                        ││├─ Escherichia coli O157:H7 str. FRIK966   
                                                        ││├─ Escherichia coli O157:H7 str. EC869   
                                                        ││├─ Escherichia coli O157:H7 str. EC4501   
                                                        ││├─ Escherichia coli O157:H7 str. EC4401   
                                                        ││├─ Escherichia coli O157:H7 str. EC4196   
                                                        ││├─ Escherichia coli O157:H7 str. EC4113   
                                                        ││├─ Escherichia coli O157:H7 str. EC4045   
                                                        ││├─ Escherichia coli O157:H7 str. EC4024   
                                                        └┤├─ Escherichia coli O157:H7 EDL933   
                                                         │├─ Escherichia coli 536A   
                                                         │└─ Escherichia coli 1125A   
                                                         │ ┌─ Escherichia coli IAI1   
                                                         │ ├─ Escherichia coli MS 124-1   
                                                         │┌┼─ Escherichia coli MS 84-1   
                                                         ││└─ Escherichia coli IAI1   
                                                         ││  ┌─ fig|1040638.4.peg.4175 O104:H4 str. LB226692   
                                                         ││  ├─ Escherichia coli 55989   
                                                         ││  ├─ Escherichia coli H591   
                                                         └┤ ┌┼─ Escherichia coli TA271   
                                                          │ │├─ Escherichia coli MS 119-7   
                                                          │ │├─ Escherichia coli 55989   
                                                          │┌┤└─ fig|6666666.5357.peg.4835 TY-2482 strain   
                                                          │││┌─ Escherichia coli E22   
                                                          ││└┼─ Escherichia coli O103:H2 str. 12009   
                                                          └┤ └─ Escherichia coli E22   
                                                           │┌─ Escherichia coli SMS-3-5   
                                                           ││ ┌─ Escherichia coli ETEC H10407   
                                                           ││┌┴── Escherichia coli MS 107-1   
                                                           └┤│┌─ Escherichia coli SE11   
                                                            │││┌─ Escherichia coli 1827-70   
                                                            │││├─ Escherichia coli ATCC 8739   
                                                            │││├─ Escherichia coli B7A   
                                                            └┤│├─ Escherichia coli BL21   
                                                             ││├─ Escherichia coli BW2952   
                                                             ││├─ Escherichia coli E110019   
                                                             ││├─ Escherichia coli E24377A   
                                                             ││├─ Escherichia coli EC4100B   
                                                             └┤├─ Escherichia coli HS   
                                                              │├─ Escherichia coli K12   
                                                              │├─ Escherichia coli MS 116-1   
                                                              │├─ Escherichia coli MS 146-1   
                                                              │├─ Escherichia coli MS 187-1   
                                                              │├─ Escherichia coli MS 78-1   
                                                              │├─ Escherichia coli O26:H11 str. 11368   
                                                              │├─ Escherichia coli W   
                                                              │├─ Escherichia coli W3110   
                                                              │├─ Escherichia coli str. K-12 substr. MG1655   
                                                              └┼─ Escherichia coli str. K-12 substr. MG1655   
                                                               ├─ Escherichia coli str. K-12 substr. DH10B   
                                                               ├─ Escherichia coli W   
                                                               ├─ Escherichia coli OP50   
                                                               ├─ Escherichia coli O111:H- str. 11128   
                                                               ├─ Escherichia coli MS 196-1   
                                                               ├─ Escherichia coli MS 182-1   
                                                               ├─ Escherichia coli MS 145-7   
                                                               ├─ Escherichia coli KO11   
                                                               ├─ Escherichia coli HS   
                                                               ├─ Escherichia coli H736   
                                                               ├─ Escherichia coli E24377A   
                                                               ├─ Escherichia coli E110019   
                                                               ├─ Escherichia coli DH1   
                                                               ├─ Escherichia coli (DE3) BL21(DE3)   
                                                               ├─ Escherichia coli B7A   
                                                               ├─ Escherichia coli B str. REL606   
                                                               ├─ Escherichia coli ATCC 8739   
                                                               └─ Escherichia coli 101-1   
  
Transcriptional regulator yidN, Cro/CI family (124)
Putrescine utilization regulator (102)
Others (4)