┌─ Escherichia coli (14-260/261) FVEC1302 (3)  
                                                               ┌┴─ Escherichia coli (14-260/261) O103:H2 str. 12009   
                                                              ┌┴─ Escherichia coli (14-260/261) K12 (90)  
                                                             ┌┴┬─ Escherichia coli (14-260/261) TA271   
                                                            ┌┤ └─ Escherichia coli (4-247/248) OP50   
                                                           ┌┤└─ Escherichia coli (14-260/261) M718   
   ┌───────────────────────────────────────────────────────┤└─ Escherichia coli (14-260/261) ETEC H10407   
┌──┤                                                       └─ Escherichia coli (14-260/261) B7A (1)  
│  └──────────────────────────────────────────────────────────────┬─ Escherichia coli (33-279/285) NC101   
│                                                                 └┬─ Escherichia coli (33-279/285) K12 (100)  
│                                                                  └┬─ Escherichia coli (33-279/285) 1044A (27)  
│                                                                   └─ Escherichia coli (33-279/285) O157:H7 EDL933 (1)  
│                                                                    ┌─ Escherichia coli (17-255/258) HS (2)  
│                                                                   ┌┴─ Escherichia coli (17-255/258) H591 (1)  
│                                                                  ┌┴─ Escherichia coli (17-255/258) B171 (1)  
│                                                                 ┌┴┬─ Escherichia coli (17-255/258) 101-1 (14)  
│                                                                 │ └┬─ Escherichia coli (17-255/258) B7A (7)  
│                                                                ┌┤  └─ Escherichia coli (17-255/258) 2362-75   
│                                                               ┌┤└─ Escherichia coli (19-257/260) 53638 (2)  
│                                                              ┌┤└─ Escherichia coli (17-255/258) SMS-3-5   
│                                                             ┌┤└─ Escherichia coli (17-255/258) IAI39 (1)  
│                                                             │└─ Escherichia coli (17-255/258) MS 115-1   
│                                                            ┌┤┌─ Escherichia coli (17-255/258) 83972 (5)  
│                                                            │└┤┌─ Escherichia coli (17-255/258) APEC O1 (5)  
┤                                                            │ └┤  ┌─ Escherichia coli (17-255/258) 536 (6)  
│                                                            │  │ ┌┴─ Escherichia coli (17-255/258) WV_060327   
│                                                            │  └┬┴─ Escherichia coli (17-255/258) S88   
│                                                           ┌┤   └┬─ Escherichia coli (17-255/258) SE15   
│                                                           ││    └┬─ Escherichia coli (19-257/260) E2348/69   
│                                                           ││     └┬─ Escherichia coli (17-255/258) M605   
│             ┌─────────────────────────────────────────────┤│      └┬─ Escherichia coli (17-255/258) ED1a (1)  
│             │                                             ││       └─ Escherichia coli (17-255/258) NC101   
│  ┌──────────┤                                             │└─ Escherichia coli (17-255/258) MS 21-1   
│  │          │                                             └─ Escherichia coli (17-255/258) O83:H1 str. NRG 857C   
│  │          └──────────────────────────────┬─ Escherichia coli (14-259/259) APEC O1 (6)  
│  │                                         └┬─ Escherichia coli (14-259/259) 83972 (5)  
│  │                                          └┬─ Escherichia coli (14-259/259) SE15   
│  │                                           └─ Escherichia coli (14-259/259) M605   
│  │                                                               ┌─ Escherichia coli B171 (6)  
│  │                                                              ┌┴─ Escherichia coli IAI1 (1)  
│  │                                                             ┌┴┬─ Escherichia coli K12 (15)  
└──┤                                                            ┌┤ └─ Escherichia coli B7A (12)  
   │                                                           ┌┤└─ Escherichia coli MS 182-1   
   │                                                          ┌┤└─ Escherichia coli B088 (5)  
   │                                                          │└┬─ Escherichia coli MS 69-1   
   │          ┌───────────────────────────────────────────────┤ └─ Escherichia coli SE11   
   │          │                                               └┬─ Escherichia coli 1827-70 (4)  
   │          │                                                └─ fig|1040638.4.peg.4134 O104:H4 str. LB226692 (3)  
   │          │                                                 ┌─ Escherichia coli MS 115-1   
   │          │                                                ┌┴─ Escherichia coli MS 69-1   
   └──────────┤                                               ┌┴─ Escherichia coli B088 (14)  
              │                                              ┌┴┬─ Escherichia coli B7A (2)  
              │                                             ┌┤ └─ Escherichia coli 1827-70 (4)  
              │                                             │└┬─ Escherichia coli K12 (18)  
              │      ┌──────────────────────────────────────┤ └┬─ Escherichia coli ETEC H10407   
              │      │                                      │  └─ Escherichia coli E24377A (1)  
              └──────┤                                      └─ fig|1040638.4.peg.4133 O104:H4 str. LB226692 (3)  
                     │                                             ┌─ Escherichia coli (49-297/297) 1044A (21)  
                     └─────────────────────────────────────────────┤┌─ Escherichia coli (49-297/297) O157:H7 str. EC869 (3)  
                                                                   ││   ┌─ Escherichia coli (49-297/297) 536 (34)  
                                                                   └┤  ┌┴─ Escherichia coli (49-297/297) 2362-75 (2)  
                                                                    │ ┌┴┬─ Escherichia coli (49-297/297) MS 69-1   
                                                                    │┌┤ └─ Escherichia coli (13-261/261) SMS-3-5   
                                                                    └┤└─ Escherichia coli (49-297/297) TA280   
                                                                     │ ┌─ fig|1040638.4.peg.5594 O104:H4 (49-297/297) str. LB226692 (25)  
                                                                     └┬┴─ Escherichia coli (49-297/297) E24377A (1)  
                                                                      └┬─ Escherichia coli (49-297/297) K12 (24)  
                                                                       └┬─ Escherichia coli (49-297/297) H736 (1)  
                                                                        └┬─ Escherichia coli (49-297/297) M718 (3)  
                                                                         └─ Escherichia coli (49-297/297) B171 (6)  
  
3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55) (26)
Carnitine racemase (EC 5.-.-.-) / Carnitinyl-CoA dehydratase (EC 4.2.1.-) (12)
Phenylacetate degradation enoyl-CoA hydratase PaaB (EC 4.2.1.17) (9)
Phenylacetate degradation enoyl-CoA hydratase PaaA (EC 4.2.1.17) (8)
Methylmalonyl-CoA decarboxylase (EC 4.1.1.41) (8)
Naphthoate synthase (EC 4.1.3.36) (4)
Others (3)