┌─ Escherichia coli (3-238/238) 1044A (18)  
                                                     ┌┴─ Escherichia coli (3-244/244) 1125A (2)  
                                                    ┌┴─ Escherichia coli (3-259/259) O157:H7 (1)  
                                                   ┌┴┬─ Escherichia coli (3-259/259) 042 (9)  
                                                   │ └┬─ Escherichia coli (3-244/244) 536 (15)  
                                                  ┌┤  └─ Escherichia coli (3-259/259) APEC O1 (4)  
                                                 ┌┤└─ Escherichia coli (3-244/244) O103:H2 str. 12009   
                                                ┌┤└─ fig|6666666.5357.peg.2742 TY-2482 (3-244/244) strain (15)  
                                               ┌┤└─ fig|1040638.4.peg.3169 O104:H4 (3-238/238) str. LB226692 (31)  
                       ┌───────────────────────┤└─ Escherichia coli (3-238/238) MS 21-1   
                       │                       └─ Escherichia coli (3-238/238) 2362-75 (10)  
                 ┌─────┤                  ┌─ Escherichia coli (16-267/269) MS 182-1 (1)  
                 │     │                 ┌┴─ Escherichia coli (16-267/269) E24377A (1)  
                 │     └─────────────────┤┌─ Escherichia coli (16-267/269) MS 21-1   
                 │                       └┤ ┌─ Escherichia coli (16-267/274) APEC O1 (6)  
                 │                        └┬┴─ Escherichia coli (16-267/269) O111:H- str. 11128 (1)  
           ┌─────┤                         └┬─ Escherichia coli (16-267/269) K12 (110)  
           │     │                          └┬─ Escherichia coli (16-267/274) 2362-75 (1)  
           │     │                           └─ Escherichia coli (1-236/238) B088 (2)  
           │     │                     ┌─ Escherichia coli (6-249/257) MS 21-1 (1)  
           │     └─────────────────────┤┌─ Escherichia coli (6-249/257) 042 (11)  
           │                           └┤┌─ Escherichia coli (6-249/257) K12 (41)  
           │                            └┤ ┌─ Escherichia coli (1-249/257) MS 182-1   
  ┌────────┤                             └┬┴─ fig|1040638.4.peg.2569 O104:H4 (6-249/257) str. LB226692 (17)  
  │        │                              └┬─ Escherichia coli (6-249/257) ETEC H10407   
  │        │                               └┬─ Escherichia coli (6-249/257) M718   
  │        │                                └┬─ Escherichia coli (6-249/257) 1044A (23)  
  │        │                                 └─ Escherichia coli (6-249/257) 536 (26)  
  │        │                                                     ┌─ Escherichia coli (8-258/260) K12 (20)  
  │        │       ┌─────────────────────────────────────────────┴─ Escherichia coli (8-258/260) MS 145-7 (1)  
  │        └───────┤                              ┌─ Escherichia coli (5-234/253) APEC O1 (4)  
  │                │                             ┌┴─ Escherichia coli (10-224/243) 2362-75 (19)  
  │                └────────┬────────────────────┴─ Escherichia coli (10-224/243) MS 69-1 (1)  
 ┌┤                         └──────────────────────────┬─ Escherichia coli (6-237/255) NC101   
 ││                                                    └┬─ Escherichia coli (6-251/255) 536   
 ││                                                     └┬─ Escherichia coli (6-237/255) ABU 83972 (9)  
 ││                                                      └┬─ Escherichia coli (6-237/255) IHE3034   
 ││                                                       └┬─ Escherichia coli (6-237/255) 2362-75 (13)  
 ││                                                        └┬─ Escherichia coli (6-237/255) H299   
 ││                                                         └┬─ Escherichia coli (16-247/265) K12 (16)  
 ││                                                          └┬─ Escherichia coli (6-251/255) 101-1 (12)  
 ││                                                           └┬─ Escherichia coli (6-251/255) MS 84-1   
 ││                                                            └─ fig|1040638.4.peg.2605 O104:H4 (6-251/255) str. LB226692 (32)  
 │└────────────────┬─────────────────────────── Escherichia coli (4-232/232) B185 (1)  
 │                 └────────────────────────────────────┬─ Escherichia coli (6-248/251) MS 107-1   
┌┤                                                      └┬─ Escherichia coli (6-248/251) 1827-70   
││                                                       └┬─ Escherichia coli (6-248/251) K12 (115)  
││                                                        └┬─ Escherichia coli (2-232/235) 83972 (11)  
││                                                         └┬─ Escherichia coli (2-232/235) SMS-3-5   
││                                                          └─ Escherichia coli (6-248/251) IAI39 (1)  
││                                          ┌─ Escherichia coli (17-262/269) K12 (70)  
││                                         ┌┴─ Escherichia coli (9-254/261) E24377A (1)  
││                                        ┌┴─ Escherichia coli (2-238/245) 53638 (13)  
││                                       ┌┴┬─ Escherichia coli (2-238/245) SE15   
││                       ┌───────────────┤ └─ Escherichia coli (9-254/261) M605   
││       ┌───────────────┤               └─── Escherichia coli (9-254/266) O157:H7 str. EC4024   
│└───────┤               └─────────────── Escherichia coli (6-237/252) 2362-75 (27)  
│        │                                           ┌─ Escherichia coli (4-241/243) B354 (3)  
│        └───────────────────────────────────────────┤  ┌─ Escherichia coli (4-241/243) H299   
┤                                                    │ ┌┴─ Escherichia coli (4-241/243) E22 (1)  
│                                                    └┬┴─ Escherichia coli (4-241/243) K12 (101)  
│                                                     └┬─ Escherichia coli (4-241/243) O157:H7 str. EC4196   
│                                                      └┬─ Escherichia coli (4-241/243) M605 (1)  
│                                                       └┬─ Escherichia coli (4-241/243) MS 185-1   
│                                                        └┬─ Escherichia coli (4-241/243) APEC O1 (1)  
│                                                         └─ Escherichia coli (4-241/243) 2362-75 (15)  
│                                                                     ┌─ Escherichia coli (8-256/260) MS 107-1   
│                                                                    ┌┴─ Escherichia coli (8-256/260) 83972 (7)  
│                                                                   ┌┴─ Escherichia coli (8-256/260) 536 (3)  
│                                                                  ┌┴─ Escherichia coli (8-256/260) ED1a (6)  
│                                                                 ┌┴─ Escherichia coli (8-256/260) MS 200-1   
│     ┌───────────────────────────────────────────────────────────┴┬─ Escherichia coli (8-256/260) MS 200-1   
│     │                                                            └─ fig|1040638.4.peg.675 O104:H4 (8-256/260) str. LB226692 (7)  
└─────┤                                  ┌─ Escherichia coli K12 (7)  
      │                                  │┌─ Escherichia coli 83972 (5)  
      └──────────────────────────────────┤│   ┌─ Escherichia coli 536 (12)  
                                         ││  ┌┴─ Escherichia coli M605 (1)  
                                         └┤ ┌┴─ Escherichia coli UTI89 (1)  
                                          │┌┴┬─ Escherichia coli B088   
                                          ││ └─ Escherichia coli MS 107-1   
                                          └┤┌─ Escherichia coli B354   
                                           ││  ┌─ Escherichia coli E2348/69   
                                           └┤ ┌┴─ Escherichia coli 2362-75   
                                            │┌┴┬─ Escherichia coli H591 (8)  
                                            ││ └─ fig|1040638.4.peg.4045 O104:H4 str. LB226692 (76)  
                                            └┤  ┌─ Escherichia coli E24377A (1)  
                                             │ ┌┴─ Escherichia coli MS 115-1   
                                             └┬┴─ Escherichia coli SE11   
                                              └┬─ Escherichia coli O111:H- str. 11128   
                                               └┬─ Escherichia coli IAI1 (1)  
                                                └─ fig|6666666.5357.peg.2961 TY-2482 strain   
  
Transcriptional regulatory protein YciT (16)
Galactitol utilization operon repressor (9)
L-fucose operon activator (9)
Glucitol operon repressor (8)
Transcriptional repressor of aga operon (8)
DeoR-type transcriptional regulator YihW (6)
Ascorbate utilization transcriptional regulator UlaR, HTH-type (6)
Deoxyribose operon repressor, DeoR family (5)
Putative transcriptional regulator YgbI, DeoR family (5)
Hypothetical transcriptional regulator ygbI (4)
Glycerol-3-phosphate regulon repressor (2)
Putative regulatory protein (2)
Glycerol-3-phosphate regulon repressor, DeoR family (1)
Putative deoxyribose operon repressor (1)
putative transcriptional regulator (1)
COG1349: Transcriptional regulators of sugar metabolism (1)
Others (7)