fig|409438.11.peg.5041
Escherichia coli SE11 (447-560/560)
MTLLP
L
I
Q
-
K
T
GNLQLQ
MNF
N
LS
---------
D
P
PT
IRSFT
S
KD
G
N
S
Y
I
E
M
P
YTK
L
R
S
LS
Q
KVN
LK
E
GQ
S
LV
VT
GF
D
Q
NNTT
T
S
K
A
G
T
F
TP
A
N
P
L
F
GG
SQ
T
G
KNE
R
S
T
LVI
I
ITPTFPSGGNNG
fig|595495.4.peg.3701
Escherichia coli KO11 (447-560/560)
MTLLP
L
I
Q
-
K
T
GNLQLQ
MNF
N
LS
---------
D
P
PT
IRSFT
S
KD
G
N
S
Y
I
E
M
P
YTK
L
R
S
LS
Q
KVN
LK
E
GQ
S
LV
VT
GF
D
Q
NNTT
T
S
K
A
G
T
F
TP
A
N
P
L
F
GG
SQ
T
G
KNE
R
S
T
LVI
I
ITPTFPSGGNNG
fig|679207.4.peg.4572
Escherichia coli MS 107-1 (447-560/560)
MTLLP
L
I
Q
-
K
T
GNLQLQ
MNF
N
LS
---------
D
P
PT
IRSFT
S
KD
G
N
S
Y
I
E
M
P
YTK
L
R
S
LS
Q
KVN
LK
E
GQ
S
LV
VT
GF
D
Q
NNTT
T
S
K
A
G
T
F
TP
A
N
P
L
F
GG
SQ
T
G
KNE
R
S
T
LVI
I
ITPTFPSGGNNG
fig|679205.4.peg.5008
Escherichia coli MS 124-1 (447-560/560)
MTLLP
L
I
Q
-
K
T
GNLQLQ
MNF
N
LS
---------
D
P
PT
IRSFT
S
KD
G
N
S
Y
I
E
M
P
YTK
L
R
S
LS
Q
KVN
LK
E
GQ
S
LV
VT
GF
D
Q
NNTT
T
S
K
A
G
T
F
TP
A
N
P
L
F
GG
SQ
T
G
KNE
R
S
T
LVI
I
ITPTFPSGGNNG
fig|749533.3.peg.5238
Escherichia coli MS 84-1 (447-560/560)
MTLLP
L
I
Q
-
K
T
GNLQLQ
MNF
N
LS
---------
D
P
PT
IRSFT
S
KD
G
N
S
Y
I
E
M
P
YTK
L
R
S
LS
Q
KVN
LK
E
GQ
S
LV
VT
GF
D
Q
NNTT
T
S
K
A
G
T
F
TP
A
N
P
L
F
GG
SQ
T
G
KNE
R
S
T
LVI
I
ITPTFPSGGNNG
fig|444454.5.peg.424
Escherichia coli O157:H7 str. EC4024 (447-560/560)
MTLLP
L
I
Q
-
K
T
GNLQLQ
MNF
N
LS
---------
D
P
PT
IRSFT
S
KD
G
N
S
Y
I
E
M
P
YTK
L
R
S
LS
Q
KVN
LK
E
GQ
S
LV
VT
GF
D
Q
NNTT
T
S
K
A
G
T
F
TP
A
N
P
L
F
GG
SQ
T
G
KNE
R
S
T
LVI
I
ITPTFPSGGNNG
fig|478004.5.peg.4958
Escherichia coli O157:H7 str. EC4401 (447-560/560)
MTLLP
L
I
Q
-
K
T
GNLQLQ
MNF
N
LS
---------
D
P
PT
IRSFT
S
KD
G
N
S
Y
I
E
M
P
YTK
L
R
S
LS
Q
KVN
LK
E
GQ
S
LV
VT
GF
D
Q
NNTT
T
S
K
A
G
T
F
TP
A
N
P
L
F
GG
SQ
T
G
KNE
R
S
T
LVI
I
ITPTFPSGGNNG
fig|478005.5.peg.4413
Escherichia coli O157:H7 str. EC4486 (447-560/560)
MTLLP
L
I
Q
-
K
T
GNLQLQ
MNF
N
LS
---------
D
P
PT
IRSFT
S
KD
G
N
S
Y
I
E
M
P
YTK
L
R
S
LS
Q
KVN
LK
E
GQ
S
LV
VT
GF
D
Q
NNTT
T
S
K
A
G
T
F
TP
A
N
P
L
F
GG
SQ
T
G
KNE
R
S
T
LVI
I
ITPTFPSGGNNG
fig|566546.3.peg.3412
Escherichia coli W (447-560/560)
MTLLP
L
I
Q
-
K
T
GNLQLQ
MNF
N
LS
---------
D
P
PT
IRSFT
S
KD
G
N
S
Y
I
E
M
P
YTK
L
R
S
LS
Q
KVN
LK
E
GQ
S
LV
VT
GF
D
Q
NNTT
T
S
K
A
G
T
F
TP
A
N
P
L
F
GG
SQ
T
G
KNE
R
S
T
LVI
I
ITPTFPSGGNNG
fig|566546.4.peg.4766
Escherichia coli W (447-560/560)
MTLLP
L
I
Q
-
K
T
GNLQLQ
MNF
N
LS
---------
D
P
PT
IRSFT
S
KD
G
N
S
Y
I
E
M
P
YTK
L
R
S
LS
Q
KVN
LK
E
GQ
S
LV
VT
GF
D
Q
NNTT
T
S
K
A
G
T
F
TP
A
N
P
L
F
GG
SQ
T
G
KNE
R
S
T
LVI
I
ITPTFPSGGNNG
fig|6666666.5357.peg.2819
Escherichia coli TY-2482 (447-560/560)
MTLLP
L
I
Q
-
K
T
GNLQLQ
MNF
N
LS
---------
D
P
PT
IRSFT
S
KD
G
N
S
Y
I
E
M
P
YTK
L
R
S
LS
Q
KVN
LK
E
GQ
S
LV
VT
GF
D
Q
NNTT
T
S
K
A
G
T
F
TP
A
N
P
L
F
GG
SQ
T
G
KNE
R
S
T
LVI
I
ITPTFPSGGNNG
fig|1040638.4.peg.391
Escherichia coli O104:H4 str. LB226692
MTLLP
L
I
Q
-
K
T
GNLQLQ
MNF
N
LS
---------
D
P
PT
IRSFT
S
KD
G
N
S
Y
I
E
M
P
YTK
L
R
S
LS
Q
KVN
LK
E
GQ
S
LV
VT
GF
D
Q
NNTT
T
S
K
A
G
T
F
TP
A
N
P
L
F
GG
SQ
T
G
KNE
R
S
T
LVI
I
ITPTFPSGGNNG
fig|656440.3.peg.4197
Escherichia coli TA206 (440-548/548)
MT
V
LP
Y
I
R
-
D
N
G
TI
QLQ
MSF
SLS
---------
D
D
PT
ITTVS
A
KD
G
S
T
S
IQ
T
P
T
T
D
V
R
S
LT
Q
RAN
LK
P
GQTLVL
N
GFQ
S
LYNE
A
N
R
QG
T
T
S
K
S
W
F
GF
GG
GE
S
A
ERD
R
S
M
L
L
V
L
V
TP
VLS
S
fig|562.373.peg.666
Escherichia coli 1125A (429-541/547)
MTLLP
Y
I
Q
P
D
S
Q
NLQL
L
FSM
SLS
---------
D
K
PT
FEVFE
S
--
GGS
K
A
Q
T
PNVDL
K
T
IN
Q
TID
LK
S
GQT
VI
LSGFQQ
SNRK
T
S
KQGV
I
TP
S
F
F
G
LGG
GV
N
S
EDG
D
T
I
LV
V
L
ITP
NVLNS
G
SSA
fig|749540.3.peg.2824
Escherichia coli MS 146-1 (429-541/547)
MTLLP
Y
I
Q
P
D
S
Q
NLQL
L
FSM
SLS
---------
D
K
PT
FEVFE
S
--
GGS
K
A
Q
T
PNVDL
K
T
IN
Q
TID
LK
S
GQT
VI
LSGFQQ
SNRK
T
S
KQGV
I
TP
S
F
F
G
LGG
GI
N
S
EDG
D
T
I
LV
V
L
ITP
NVLNS
G
SSA
fig|637388.3.peg.3471
Escherichia coli O157:H7 str. FRIK2000 (429-541/547)
MTLLP
Y
I
Q
P
D
S
Q
NLQL
L
FSM
SLS
---------
D
K
PT
FEVFE
S
--
GGS
K
A
Q
T
PNVDL
K
T
IN
Q
TID
LK
S
GQT
VI
LSGFQQ
SNRK
T
S
KQGV
I
TP
S
F
F
G
LGG
GI
N
S
EDG
D
T
I
LV
V
L
ITP
NVLNS
G
SSA
fig|562.375.peg.5429
Escherichia coli EC4100B (429-541/547)
MTLLP
Y
I
Q
P
D
S
Q
NLQL
L
FSM
SLS
---------
D
K
PT
FEVFE
S
--
GGS
K
A
Q
T
PNVDL
K
T
IN
Q
TID
LK
S
GQT
VI
LSGFQQ
SNRK
T
S
KQGV
I
TP
S
F
F
G
LGG
GI
N
S
EDG
D
T
I
LV
V
L
ITP
NVLNS
G
SSA
fig|656393.3.peg.26
Escherichia coli H299 (433-536/539)
MTLLP
F
I
L
P
D
S
QT
LQL
L
YSM
SLS
---------
D
K
P
V
IENYE
S
--
GGS
K
A
Q
L
PNVDL
K
T
IN
Q
TVD
LK
S
GQT
VI
I
SGFQQ
SGRR
S
G
KQGV
G
TP
G
F
F
G
LGG
GI
N
S
END
D
T
I
LV
V
L
ITP
fig|585397.6.peg.277
Escherichia coli ED1a (433-536/539)
MTLLP
F
I
L
P
D
S
QT
LQL
L
YSM
SLS
---------
D
K
P
V
IENYE
S
--
GGS
K
A
Q
L
PNVDL
K
T
IN
Q
TVD
LK
S
GQT
VI
I
SGFQQ
SGRR
S
G
KQGV
G
TP
G
F
F
G
LGG
GI
N
S
END
D
T
I
LV
V
L
ITP
fig|585397.9.peg.5379
Escherichia coli ED1a (433-536/539)
MTLLP
F
I
L
P
D
S
QT
LQL
L
YSM
SLS
---------
D
K
P
V
IENYE
S
--
GGS
K
A
Q
L
PNVDL
K
T
IN
Q
TVD
LK
S
GQT
VI
I
SGFQQ
SGRR
S
G
KQGV
G
TP
G
F
F
G
LGG
GI
N
S
END
D
T
I
LV
V
L
ITP
fig|340184.3.peg.1328
Escherichia coli B7A (433-536/539)
MTLLP
F
I
L
P
D
S
QT
LQL
L
YSM
SLS
---------
D
K
P
V
IENYE
S
--
GGS
K
A
Q
L
PNVDL
K
T
IN
Q
TVD
LK
S
GQT
VI
I
SGFQQ
SGRR
S
G
KQGV
G
TP
G
F
F
G
LGG
GI
N
S
END
D
T
I
LV
V
L
ITP
fig|340184.6.peg.1398
Escherichia coli B7A (433-536/539)
MTLLP
F
I
L
P
D
S
QT
LQL
L
YSM
SLS
---------
D
K
P
V
IENYE
S
--
GGS
K
A
Q
L
PNVDL
K
T
IN
Q
TVD
LK
S
GQT
VI
I
SGFQQ
SGRR
S
G
KQGV
G
TP
G
F
F
G
LGG
GI
N
S
END
D
T
I
LV
V
L
ITP
fig|478005.5.peg.4323
Escherichia coli O157:H7 str. EC4486 (433-536/539)
MTLLP
F
I
L
P
D
S
QT
LQL
L
YSM
SLS
---------
D
K
P
V
IENYE
S
--
GGS
K
A
Q
L
PNVDL
K
T
IN
Q
TVD
LK
S
GQT
VI
I
SGFQQ
SGRR
S
G
KQGV
G
TP
G
F
F
G
LGG
GI
N
S
END
D
T
I
LV
V
L
ITP
fig|749550.3.peg.4117
Escherichia coli MS 200-1 (433-536/539)
MTLLP
F
I
L
P
D
S
QT
LQL
L
YSM
SLS
---------
D
K
P
V
IENYE
S
--
GGS
K
A
Q
L
PNVDL
K
T
IN
Q
TVD
LK
S
GQT
VI
I
SGFQQ
SGRR
S
G
KQGV
G
TP
G
F
F
G
LGG
GI
N
S
END
D
T
I
LV
V
L
ITP
fig|749548.3.peg.5344
Escherichia coli MS 196-1 (297-400/403)
MTLLP
F
I
L
P
D
S
QT
LQL
L
YSM
SLS
---------
D
K
P
V
IENYE
S
--
GGS
K
A
Q
L
PNVDL
K
T
IN
Q
TVD
LK
S
GQT
VI
I
SGFQQ
SGRR
S
G
KQGV
G
TP
G
F
F
G
LGG
GI
N
S
END
D
T
I
LV
V
L
ITP
fig|749527.3.peg.4674
Escherichia coli MS 21-1 (297-400/403)
MTLLP
F
I
L
P
D
S
QT
LQL
L
YSM
SLS
---------
D
K
P
V
IENYE
S
--
GGS
K
A
Q
L
PNVDL
K
T
IN
Q
TVD
LK
S
GQT
VI
I
SGFQQ
SGRR
S
G
KQGV
G
TP
G
F
F
G
LGG
GI
N
S
END
D
T
I
LV
V
L
ITP
fig|585397.7.peg.3509
Escherichia coli ED1a (427-530/533)
MTLLP
F
I
Q
P
G
S
HR
LQL
L
FSM
SLS
---------
D
K
P
V
FEVFE
S
--
GGS
R
A
Q
T
P
S
V
E
L
K
T
IN
Q
TID
LK
S
D
QT
VI
LSGFQQ
FSRK
S
L
R
QGV
G
TP
S
F
F
G
LGG
GV
D
S
ADD
D
T
I
LV
V
L
ITP
fig|585397.9.peg.3505
Escherichia coli ED1a (427-530/533)
MTLLP
F
I
Q
P
G
S
HR
LQL
L
FSM
SLS
---------
D
K
P
V
FEVFE
S
--
GGS
R
A
Q
T
P
S
V
E
L
K
T
IN
Q
TID
LK
S
D
QT
VI
LSGFQQ
FSRK
S
L
R
QGV
G
TP
S
F
F
G
LGG
GV
D
S
ADD
D
T
I
LV
V
L
ITP
fig|656417.3.peg.1881
Escherichia coli M605 (445-551/563)
M
N
I
LP
R
V
L
-
D
N
G
Q
V
M
LQ
YGI
NI
S
S
L
A
G
TH
NGF
D
E
V
T
A----
-
--
A
G
T
T
IQ
L
PN
I
QQ
R
S
FI
Q
SSL
L
Q
N
G
N
TLVL
A
G
Y
E
Q
QRNE
T
S
D
S
G
I
G
D
P
S
F
K
LLGG
AR
A
G
SHA
K
T
L
I
VI
C
ITP
fig|358709.5.peg.2505
Escherichia coli 101-1 (430-536/545)
M
N
LLP
S
V
G
-
E
D
GN
IL
LQ
YGI
TI
S
S
LVGSN
D
GF
D
Q
A
T
V----
-
--
N
G
T
I
IQ
L
PNVD
S
T
T
FV
Q
SSL
LK
N
G
N
TL
I
L
A
G
Y
E
Q
KRNE
I
S
D
S
G
L
G
K
P
G
F
K
LLGG
SR
NG
KDS
R
E
I
K
I
I
S
ITP
fig|344601.3.peg.3944
Escherichia coli B171 (436-542/552)
M
N
LLP
Q
V
A
-
D
D
GN
IL
LQ
YGV
T
LS
ELVGSNNGF
D
Q
A
T
V----
-
--
N
G
T
V
IQ
L
PNVD
S
T
T
FV
Q
SSM
L
R
N
G
N
TLVL
A
G
Y
E
K
KRNE
S
V
D
QGV
G
T
T
S
F
K
LLGG
AL
NG
SAS
RT
V
T
VI
C
ITP
fig|344601.5.peg.4137
Escherichia coli B171 (436-542/552)
M
N
LLP
Q
V
A
-
D
D
GN
IL
LQ
YGV
T
LS
ELVGSNNGF
D
Q
A
T
V----
-
--
N
G
T
V
IQ
L
PNVD
S
T
T
FV
Q
SSM
L
R
N
G
N
TLVL
A
G
Y
E
K
KRNE
S
V
D
QGV
G
T
T
S
F
K
LLGG
AL
NG
SAS
RT
V
T
VI
C
ITP
fig|216593.1.peg.1131
Escherichia coli E2348/69 (436-542/552)
M
N
LLP
Q
V
A
-
D
D
GN
IL
LQ
YGV
T
LS
ELVGSNNGF
D
Q
A
T
V----
-
--
N
G
T
V
IQ
L
PNVD
S
T
T
FV
Q
SSM
L
R
N
G
N
TLVL
A
G
Y
E
K
KRNE
S
V
D
QGV
G
T
T
S
F
K
LLGG
AL
NG
SAS
RT
V
T
VI
C
ITP
fig|574521.7.peg.4822
Escherichia coli O127:H6 str. E2348/69 (436-542/552)
M
N
LLP
Q
V
A
-
D
D
GN
IL
LQ
YGV
T
LS
ELVGSNNGF
D
Q
A
T
V----
-
--
N
G
T
V
IQ
L
PNVD
S
T
T
FV
Q
SSM
L
R
N
G
N
TLVL
A
G
Y
E
K
KRNE
S
V
D
QGV
G
T
T
S
F
K
LLGG
AL
NG
SAS
RT
V
T
VI
C
ITP
Consen1
Primary consensus
MtLLP
i
-
d
gnlqLq
sLS
---------
D
pt
s
--
ggs
iq
Pnvdl
t
Q
Lk
GqtlvlsGfqq
t
kqGv
Tp
f
llGG
ng
rt
lVi
ITPtfpsgGnng
Consen2
Secondary consensus
n
v
pk
qtil
l
elvgsnngf
av
-
kdnnt
ae
ytks
s
r
nsvi
y
k
s
da
t
t
n
gf
s
ds
t
v
nvlns
ssa
Consensus 1
(when a gap)
Conservative difference
Consensus 2
(when a gap)
Nonconservative diff.
Other character