fig|1040638.4.peg.350   Escherichia coli O104:H4 str. LB226692     MYAIKPREIINYDAGIVLIDLRQINVKATSDNTNQQH
fig|6666666.5357.peg.4152   Escherichia coli TY-2482     MYAIKPREIINYDAGIVLIDLRQINVKATSDNTNQQH
fig|670897.3.peg.4409   Escherichia coli 2362-75     MYAIKPREIINYDAGIVLIDLRQINVKATSDNTNQQH
fig|344601.5.peg.5022   Escherichia coli B171     MYAIKPREIINYDAGIVLIDLRQINVKATSDNTNQQH
fig|701177.3.peg.2463   Escherichia coli O55:H7 str. CB9615     MYAIKPREIINYDAGIVLIDLRQINVKATSDNTNQQH
fig|749527.3.peg.2045   Escherichia coli MS 21-1     MYAIKPREIINYDAGIVLIDLHQINVKATSDNTNQQH
fig|585035.6.peg.564   Escherichia coli S88     MYAIKPREIINYDAGIVLIDLHQINVKATSDNTNQQH
fig|344601.5.peg.4626   Escherichia coli B171     MYAIKPREIINYYAGIVLIDLHQISVKATSDNTNQQH
fig|340186.5.peg.3383   Escherichia coli E110019     MYAIKPREIINYYAGIVLIDLHQISVKATSDNTNQQH
fig|585395.4.peg.824   Escherichia coli O103:H2 str. 12009     MYAIKPREIINYYAGIVLIDLHQISVKATSDNTNQQH
fig|573235.3.peg.1165   Escherichia coli O26:H11 str. 11368     MYAIKPREIINYYAGIVLIDLHQISVKATSDNTNQQH
fig|749533.3.peg.3098   Escherichia coli MS 84-1 (49-85/85)     IYAIKPRQIINYDAGIVLIDPHQLNVKTTSDNTNQRH
fig|511693.5.peg.781   Escherichia coli BL21     MEAIKPRQIINYDAGIVLIDLHQLNVKTTSDNTNQRH
fig|469008.4.peg.2976   Escherichia coli BL21(DE3)     MEAIKPRQIINYDAGIVLIDLHQLNVKTTSDNTNQRH
fig|595496.3.peg.1509   Escherichia coli BW2952     MEAIKPRQIINYDAGIVLIDLHQLNVKTTSDNTNQRH
fig|536056.3.peg.2205   Escherichia coli DH1     MEAIKPRQIINYDAGIVLIDLHQLNVKTTSDNTNQRH
fig|511145.12.peg.1619   Escherichia coli str. K-12 substr. MG1655     MEAIKPRQIINYDAGIVLIDLHQLNVKTTSDNTNQRH
fig|511145.6.peg.1604   Escherichia coli str. K-12 substr. MG1655     MEAIKPRQIINYDAGIVLIDLHQLNVKTTSDNTNQRH
Consen1   Primary consensus     MyAIKPReIINYdAGIVLIDLhQinVKaTSDNTNQqH
Consen2   Secondary consensus      e     q    y        r ls  t       r 

Consensus 1 (when a gap)
Conservative difference
Consensus 2 (when a gap)
Nonconservative diff.
Other character