fig|1040638.4.peg.348   Escherichia coli O104:H4 str. LB226692     MYCGKQEPLFNNAQKNLQSAILRFAMKTMSYRTVNPSPYIE
fig|502346.5.peg.4109   Escherichia coli O157:H7 str. TW14588     MYCGKQEPLFNNAQKNLQSAILRFAMKTMSYRTVNPSPYIE
Consen1   Primary consensus     MYCGKQEPLFNNAQKNLQSAILRFAMKTMSYRTVNPSPYIE
Consen2   Secondary consensus                                              

Consensus 1 (when a gap)
Conservative difference
Consensus 2 (when a gap)
Nonconservative diff.
Other character