fig|1040638.4.peg.3440
Escherichia coli O104:H4 str. LB226692
MTDITANV
V
VSMPSQLFTMARSFKAVANGKIYIGKIDTDPVNPENQIQVYVENEDGSHVPVSQPIIINAAGYPVYNGQIAKFVTVQGHSMA
V
YDAYGSQQFYFPNVLKYDPDQLRQELQGSAG
V
IIVGGAILECSSVEQAQSILGLTDGKKVRTYYYNVPVVTDWVFTTEKPQSPIFYISAVGGYLILMTPNFASAGIIEGEYVPLNAAHNRNVIQKLVRDTRFSKFEYGATGTFYVLGSIHPLRDNIEIHHEAGVTVMGRYDDPTVGPEIMGLNSGGMWSFAHFLNPDATVWD
G
NNYTITAVMKNVTYILNGKIGTEYNSIHSKPHNNNPIGFFTCENCSVVGSGGVIGSDHRGINVDGAGDNCRIDIGYVTGTSNNPLQMKINAERYAFVKVGAVYGVKFDGGQTNAVVWCSGGRIDVEVGNYRWDGVNKPILAYGNNCQEITLKAGIISGVSQLMRQYNTPVARVLSAWVNNTDSLINKAEDTDKAGVTKISEIRGVNADDAVLTS
V
FYDETKLSTQEVVIICDNNFKKASSSFVYFKGKTSSGAITSWYSQNNIDPSNITDFSDWNIKIGQSGLLSISGLSFSYKINRRFQFLSVQFVDSGGTERVITIPIVMTLATTTTVSYIAGTSNLSVTRVGDTLSAVLSAGSLRFAKEHN
fig|6666666.5357.peg.3505
Escherichia coli TY-2482
MTDITANV
V
VSMPSQLFTMARSFKAVANGKIYIGKIDTDPVNPENQIQVYVENEDGSHVPVSQPIIINAAGYPVYNGQIAKFVTVQGHSMA
V
YDAYGSQQFYFPNVLKYDPDQLRQELQGSAG
V
IIVGGAILECSSVEQAQSILGLTDGKKVRTYYYNVPVVTDWVFTTEKPQSPIFYISAVGGYLILMTPNFASAGIIEGEYVPLNAAHNRNVIQKLVRDTRFSKFEYGATGTFYVLGSIHPLRDNIEIHHEAGVTVMGRYDDPTVGPEIMGLNSGGMWSFAHFLNPDATVWD
G
NNYTITAVMKNVTYILNGKIGTEYNSIHSKPHNNNPIGFFTCENCSVVGSGGVIGSDHRGINVDGAGDNCRIDIGYVTGTSNNPLQMKINAERYAFVKVGAVYGVKFDGGQTNAVVWCSGGRIDVEVGNYRWDGVNKPILAYGNNCQEITLKAGIISGVSQLMRQYNTPVARVLSAWVNNTDSLINKAEDTDKAGVTKISEIRGVNADDAVLTS
V
FYDETKLSTQEVVIICDNNFKKASSSFVYFKGKTSSGAITSWYSQNNIDPSNITDFSDWNIKIGQSGLLSISGLSFSYKINRRFQFLSVQFVDSGGTERVITIPIVMTLATTTTVSYIAGTSNLSVTRVGDTLSAVLSAGSLRFAKEHN
fig|585055.6.peg.2633
Escherichia coli 55989
MTDITANVIVSMPSQLFTMARSFKAVANGKIYIGKIDTDPVNPENQIQVYVENEDGSHVPVSQPIIINAAGYPVYNGQIAKFVTVQGHSMAIYDAYG
V
QQFYFPNVLKYDPDQLRQELQGSAGAIIVGGAILECSSVEQAQSILGLTDGKKVRTYYYNVPVVTDWVFTTEKPQSPIFYISAVGGYLILMTPNFASAGIIEGEYVPLNAAHNRNVIQKLVRDTRFSKFEYGATGTFYVLGSIHPLRDNIEIHHEAGVTVMGRYDDPTVGPEIMGLNSGGMWSFAHFLNPDATVWDDNNYTITAVMKNVTYILNGKIGTEYNSIHSKPHNNNPIGFFTCENCSVVGSGGVIGSDHRGINVDGAGDNCRIDIGYVTGTSNNPLQMKINAERYAFVKVGAVYGVKFDGGQTNAVVWCSGGRIDVEVGNYRWDGVNKPILAYGNNCQEITLKAGIISGVSQLMRQYNTPVARVLSAWVNNTDSLINKAEDTD
R
AGVTKISEIRGVNADDAVLTSAFYDETKLSTQEVVIICDNNFKKASSSFVYFKGKTSSGAITSWYSQNNIDPSNITDFSDWNIKIGQSGLLSISGLSFSYKINRRFQFLSVQFVDSGGTERVITIPIVMTLATTTTVSYIAGTSNLSVTRVGDTLSAVLSAGSLRFAKEHN
fig|585055.8.peg.2639
Escherichia coli 55989
MTDITANVIVSMPSQLFTMARSFKAVANGKIYIGKIDTDPVNPENQIQVYVENEDGSHVPVSQPIIINAAGYPVYNGQIAKFVTVQGHSMAIYDAYG
V
QQFYFPNVLKYDPDQLRQELQGSAGAIIVGGAILECSSVEQAQSILGLTDGKKVRTYYYNVPVVTDWVFTTEKPQSPIFYISAVGGYLILMTPNFASAGIIEGEYVPLNAAHNRNVIQKLVRDTRFSKFEYGATGTFYVLGSIHPLRDNIEIHHEAGVTVMGRYDDPTVGPEIMGLNSGGMWSFAHFLNPDATVWDDNNYTITAVMKNVTYILNGKIGTEYNSIHSKPHNNNPIGFFTCENCSVVGSGGVIGSDHRGINVDGAGDNCRIDIGYVTGTSNNPLQMKINAERYAFVKVGAVYGVKFDGGQTNAVVWCSGGRIDVEVGNYRWDGVNKPILAYGNNCQEITLKAGIISGVSQLMRQYNTPVARVLSAWVNNTDSLINKAEDTD
R
AGVTKISEIRGVNADDAVLTSAFYDETKLSTQEVVIICDNNFKKASSSFVYFKGKTSSGAITSWYSQNNIDPSNITDFSDWNIKIGQSGLLSISGLSFSYKINRRFQFLSVQFVDSGGTERVITIPIVMTLATTTTVSYIAGTSNLSVTRVGDTLSAVLSAGSLRFAKEHN
Consen1
Primary consensus
MTDITANViVSMPSQLFTMARSFKAVANGKIYIGKIDTDPVNPENQIQVYVENEDGSHVPVSQPIIINAAGYPVYNGQIAKFVTVQGHSMAiYDAYGsQQFYFPNVLKYDPDQLRQELQGSAGaIIVGGAILECSSVEQAQSILGLTDGKKVRTYYYNVPVVTDWVFTTEKPQSPIFYISAVGGYLILMTPNFASAGIIEGEYVPLNAAHNRNVIQKLVRDTRFSKFEYGATGTFYVLGSIHPLRDNIEIHHEAGVTVMGRYDDPTVGPEIMGLNSGGMWSFAHFLNPDATVWDdNNYTITAVMKNVTYILNGKIGTEYNSIHSKPHNNNPIGFFTCENCSVVGSGGVIGSDHRGINVDGAGDNCRIDIGYVTGTSNNPLQMKINAERYAFVKVGAVYGVKFDGGQTNAVVWCSGGRIDVEVGNYRWDGVNKPILAYGNNCQEITLKAGIISGVSQLMRQYNTPVARVLSAWVNNTDSLINKAEDTDkAGVTKISEIRGVNADDAVLTSaFYDETKLSTQEVVIICDNNFKKASSSFVYFKGKTSSGAITSWYSQNNIDPSNITDFSDWNIKIGQSGLLSISGLSFSYKINRRFQFLSVQFVDSGGTERVITIPIVMTLATTTTVSYIAGTSNLSVTRVGDTLSAVLSAGSLRFAKEHN
Consen2
Secondary consensus
v
v
v
v
g
r
v
Consensus 1
(when a gap)
Conservative difference
Consensus 2
(when a gap)
Nonconservative diff.
Other character