fig|1040638.4.peg.340   Escherichia coli O104:H4 str. LB226692     MIYAIAGGARMGAFQLNESLLERITRKLRDGWKRVEVLLCAMK             
fig|83334.1.peg.2992   Escherichia coli O157:H7     MQYAIAGWPVAGC--PSESLLERITRKLRDGWKRLIDILNQPGVPKNGSNTYGYPD
fig|199310.1.peg.1492   Escherichia coli CFT073     MQYAIAGWPVAGC--PSESLLERITRKLRDGWKRLIDILNQPGVPKNGSNNYGYPD
fig|83334.1.peg.1235   Escherichia coli O157:H7     MQYAIAGWPVAGC--PSESLLERITRKLRDGWKRLIDILNQPGVPKNGSNTYGYPD
Consen1   Primary consensus     MQYAIAGWPVAGC--PSESLLERITRKLRDGWKRLIDILNQPGVPKNGSNTYGYPD
Consen2   Secondary consensus                                                             

Consensus 1 (when a gap)
Conservative difference
Consensus 2 (when a gap)
Nonconservative diff.
Other character