fig|1040638.4.peg.338   Escherichia coli O104:H4 str. LB226692                  MGKG----SSK-----GHTPREARDNLKSTQLLSVIDAISEGPVEGPVDGLKSVLLNSTPVLDSEGNTNISGVTVVFR--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PVS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RSR--HRRRDLNPP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------APRRCSVQK                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
fig|550677.3.peg.3094   Escherichia coli B354     MEQFKKKKLPLLIAGAG----GKK-SKSSSRTPVEADDTVNSRAMAAILDLLGEGVIGGLVNGAKSIFIDDLPILNEDGSSNFSGITWDFRDGSQDQTPMAGFDFVETPKSVNIQLKKTHDVTVSIDNDEADRVRVIMKFPSLRSVDKSSGDTNGTTVKYKFQIANGDATFSDVVAEGEKSVDITLTAKKTGVYYRSYELKLPKPGRAYKVRVIRLTDDNSSQYLYNDTWVDSIGEIVDTPMNYPNSALVGLKVNSEQFGSTMPSRSYLVRGIKIRVPSNYNEYTNTYVGVWDGTFKLLSSSNPAWILYDLLTNTRYGLGQFVSESMIDLGQLYQIGRYCDEEVDDGFGGK--EKRFAINTQITSRQDAYRLIQDIAGAFRGMVFWAGGMVNIMQDSPSDPVMMFTNSNVKDGLFTYKGSARKDRPSVALVTYNNKEDGYKQNIEYVEDQDAMRRYGERKTEVVAFGCTSRGQAHRVGLWLLYTARMESDVITFTAGLDASFLMPGETVLIQNKYRAGKRNSGRIVEFTKNSITLDAPVSLAKSGSFIRILNQEGKIVERDVLETGENITKVTFSKALSSAETPVLNGVWTITEPDLEPMRVRIVNIAQGETSGSFDITAVENNPSKYEAIDNGATLIPQNTTVLDPTYSKPSNLQITEGTYLSSPGNLSVKLTATWE--GKSPEYWISWRRSDENNVSNWKSARVTEEQYEIVNVAENGRYDFQLYAVSFNGKKTEI-ISTVYQVLGTMTPPDAPTSLTAVGDYR-NVILNWVNP-DSVDLDHINVYASQTNNLDTAKLIAESASTTFTHAGLGDSETWYYWVRAS--NKRGMLSPPNSNLGTEATTRDVLSFLEGKITSSELGQALLEDLNSKASQEAVDELNEHINQSVESLEGAVNDVKEDIAELDKQFSDNLADFEIKFNERSDALENAQTELKGEVSATIDKVNEAFEKIDATDAAIVEIENTVSEHDKALANTVEAIKAARDEAAALIAKESEARVEGDAANAKQLEVLQSTVEESSAAVEEMKKTVAEVDRASAELTTNIEALAKTNIDLALRQDEDQHKQMVNNAKIATTQKTFADDMSAMATKVEEIRVEIGEDIKASILEESTARADGDEALAKRVTQLQSKFEGDISAAISTEQEARTSADEALTTQITQLESKVSNDIVAAIKEEQEARATEDSALASQITQLQAKVDDDISAAIRSEQEARASGDSALAKQINQLQSKVDGDISAAITQEQEARASADQALSREINSLRAQTGTDIAAAVAVETKARTDADSALSTQISSLTAKANDLEASLARETTARADGDTALTKEVSSLKAQTAKDISAAVAVETQARTDADSALSSQITKLTSQYKEDIKAAVATETKTRTEQDAALATQITKLESQTAANISAAVTTETTARTQADNALSGRIDTLKAEVDGNTATIQQQATAIADTNKKVSTAWTLKMETSTSGGQKYVAGIALGIDTTG---LSQFLVQADRFGLVNSVNGKITTPFVIENSIAYMNGAYIKDGTITNAKVGD-LQSTNFVSGRSGWRFGKNGTLEIN---------------------------------------------------------------------GNSGGNGRLVINGQRIDVYDDNNVLR----VRIG--LL                                                            
fig|679204.3.peg.4436   Escherichia coli MS 145-7     MEQFKKKKLPLFIAGAG----GKKSSKSSSRTPVEADDTVNSRAMAAILDLLGEGVIGGLVNGARSIFIDDLPIVNEDGSSNFSGITWDFRDGSQDQTPMSGFDFVETPKSVNIQLKKTHYVTVSIDNDEADRVRVIMKFPSLRSIDKKTGDTNGTTVEYKFQIANGDSTFVDVVAEGEKSVGIKLTAKKTGVYYRSYELKLPKPGRAYKVRVVRITDDNSSQYLYNDTWVDSIGEIVDTPMNYPNSVLVGLKVNSEQFGSTMPSRSYLVRGLKIRVPSNYNESSNTYAGVWDGTFKLLSSSNPAWILFDLLTNARYGLGQYVSESMIDLGQLYQIGRYCDEEVDDGFGGK--EKRFAINTQITSRQDAYRLIQDIAGAFRGMVFWAGGMVNIMQDSPSDPVMMFTNSNVKDGLFTYKGSARKDRPSVALVTYNNKEDGYKQNIEYVEDQDAMRRYGERKTEVVAFGCTSRGQAHRVGLWLLYTARMESDVITFTAGLDASFLMPGETVLIQNKYRAGKRNSGRIVEFTKNSITLDAPVSLAKSGSFIRILNQEGKIVERDVLETGENITKVTFSKALSSAETPVLNGVWTITEPDLEPMRVRIVNIAQGETPGSFDITAVENNPSKYEAIDNGATLIPQNTTVLDPTYSKPSNLQITEGTYLSSPGNLSVKLTATWE--GKSPEYWISWRRSDENNVSNWQSARVTEEQYEIVNVAENGRYDFQLYAVSFNGKKTEI-ISTVYQVLGTMTPPDAPTSLTAVGDYR-NVILNWVNP-DSVDLDHINVYASQTNNLDTAKLIAESASTTFTHAGLGDSETWYYWVRAS--NKRGMLSPPNSNLGTEATTRDVLSFLTGKITSSELGQALLEDINSKVSQEAVDELNEHINQSVESLEGAVNDVKEDIAELDKQFSDNLAGFEIKFNERSDALENAQTELKGEVSATIDKVNEAFEKIDATDAAIVEIENTVSEHDKALANTVEAIKAARDEAAALIAKESEARVEGDAANAKQLEVLQSTVEESSAAVEEMKKTVAEVDRASAELTTNIEALAKTNIDLALRQDEDQHKQMVNNAKIATTQKTFADDMSAMATKIEEIRVEIGEDIKASILEESTARADGDEALAKRVTQLQSKFEGDISAAISTEQEARTSADEALTTQITQLESKVSNDIVAAIKEEQEARATEDSALASQITQLQAKVDDDISAAIRSEQEARASGDSALAKQINQLQSKVDGDISAAITQEQEARASADQALSREINSLRAQTGTDIAAAVAVETKARTDADSALSTQITSLTAKANDLKASLARETTARADGDTALTKEVSSLKAQTAKDISAAVAVETQARTDADSALSSQITKLTSQYKEDIKAAVATETKTRTEQDAALATQITNLESQTAANISAAVTTETKARTQADNALSGRIDTLKAEVNGNTATIQQQATAIADTNKKVSTAWTLKMETSTSGGQKYVAGIALGIDTTG---LSQFLVQADRFGLVNSVNGKITTPFVIENSIAYMNGAYIKDGTITNAKVGD-LQSTNFVSGRSGWRFGKNGTLEIN---------------------------------------------------------------------GNSGGNGRLVINGQRIDVYDDNNVLR----VRIG--RL                                                            
fig|749537.3.peg.1051   Escherichia coli MS 115-1                  MATSTPIRGRKGGSSSSRTPTEQPDDLQSVAKAKILVALGEGEFAGQLT-AKDIYLDGTPLENADGSQNFSGVAWEFRPGTQAQKYIQGIPGTENEISVGTEVSSTTAWTHTFTNTQLSAVRLRLKWPSLFK-QENDGDLVGYSINYAIDLQTDGGTWQTV-------LNTSVTGKTTSGYERSHRIDLPQAGSTWTVRLRKLTADANSAKIGDTMTLQSYTEVIDAKLRYPNTALLYIEFDSSQFNGSIPQIACEPRGRVIRVPDTYDPETRTYSGTWTGVFKWAWTDNPAWIFYDLVVSDRFGLGNRLTATNIDKWTLYQVAQYCDQPVPDGKGGSGTEPRYTCNVYVQERNDAYTVLRDFAAIFRGMTYWGGDQIVALADMPRDVDYSYTRANVVNGRFTYSGSTTKTRYTTALVSWSDPGNAYADAMEPVFEQDLVARFGTNQLEMTAIGCTRQSEANRKGRWGILTNNKDR-VVSFDVGLDGNIPQPGYIIAVADELLSGKVMGGRISAVNGRVIKLDRVADAAAGDRLILNLPSGASQSRTIQAVNGESVTVTT-----AYSETPQAEAVWVVESNELYAQQYRVVSVTDND-DGTFTITGAWHDPDKYARIDTGAIIDQRPVSVIPPGNQSPPANIVISSFSVVQQNISVETMRVSWDQAQNAIAYEAQWRRND----GNWVNVPRTSTTSFDVPGIYAGRYLVRVRAINAAEISSGWGYSEEKTLTGKVGNPPKPVGFIASENVDFGIELNWGFPANTDDTLKTEIQYSLTGTEDDAMLLADVPYPQRKYQQMGLNAGQIFWYRAQLVDRSGNESGYTEWVRGQAS-----------IDVSDITDVILEDMK---GSDTFKDLIENAVDSNEKIADMANDIKQANDELEQQAKDIAKNAQ-------------------DVGKVQTSVNELSSTVGNVSSSLSQLEQTVATADTALGQRIDSISVSMDGMTGGVKNSAIAIIQNGLAQVATRKRLSATVAGNSAQLDRLDEVIVSEKEAT----------------------------------------------------------------------------------ARSLLSLQTDVNGN---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KASINSLNQTLSDYQQATATQ---------------------------------INGITATVNGHTSAITTNAQAIANVNGELSAMYNIKVGVS-SNGQYYAAGMGIGVENTPSGMQSQVIFLADRFAVTTAAGNSVALPFVIQNGQTFIRASFIQDGTIENAKIGNYIQSNNYVAGSAGWKLDKAGDAEFNNVTVRGVVYASGGSFTGEIQATSGKFKGTVEAQSFIGDVANMCVIAESAIPNTETTSSRTWTKTFKDSSGSTLSKDFVLLLSYSLTAYTSNQASRITVTANIGGTSITRSIERAANGPDMDVTIPLAVKGKTASSVTISVKEAYTNVYNSYLRPSVILMTRGTGSWS
Consen1   Primary consensus     MEQFKKKKLPL IaG G----GkK   SSSRTP EA D l S AmAaILDaLGEG i G VnGAKSIfiD tPilN DGSsNFSGiTWdFR GsQ Q  m G    E   SV  ql  T   T s  N e   VRv mKfPSL    k  GD  G tv Y   i     Tf  V-------v   lT K T  Y RSy l LPk G  y VRv rlT D sS  l n   v S  EivD  m YPNs Lv lk nS QF  tmP  s   RG  IRVP  Yn  t TY G W G FK   s NPAWI yDLl n RyGLG  vs s ID   LYQi rYCDe V DG GG --E Rf  N  i  R DAY liqD A  FRGM fW G  v  m D P D    fT sNV dG FTY GS  K R s ALVtynn  d Y   iE V dQD m RyG  k Ev A GCT r qAhR G W l T   e -VitF  GLD s   PG  v i nk  aGK   GRI       I LD PVS A     I  L              GEniT  T-----s aETP    VW i   dL   r RiVni   e- GsF IT   nnP KY  ID GA l  q  tVl P    P    i     l         l  tWe--  s  Y   WRRsD---- NW s   T      V     GRY  ql Avs     t  - S    v G m  P  P    A  d  - v LNW  P-ds D     v  S T   D A LiAe       h  lG s    yW RA --nrRG LSPP   l  eAt-------- --I  Sel   lLED  --   e   eL Eh   S E l    NDvKe   ELdkQ  D     e-------------------eV      VNE    i    aai eiE TVs  D AL   veaI  a D     i   s A ve   A     e L sTV  sSA ve m k v     As---------------------------------------------------- -----------------------------AkRv sLQsKFEGDISAAISTEQEARTSADEALTTQITQLESKVSNDIVAAIKEEQEARATEDSALASQITQLQAKVDDDISAAIRSEQEARASGDSALAKQINQLQSKVDGDISAAITQEQEARASADQALSREINSLRAQTGTDIAAAVAVETKARTDADSALSTQI SLTAKANDL ASLARETTARADGDTALTKEVSSLKAQTAKDISAAVAVETQARTDADSALSSQITKLTSQYKEDIKAAVATETKTRTEQDAALATQIT LESQTAANISAAVTTET ARTQADNALSGRIDTLKAEVNGNTATIQQQATAIADTNKKVSTAWTLKMETSTSGGQKYVAGIALGIDTTG---LSQFLVQADRFGLVNSVNGKITTPFVIENSIAYMNGAYIKDGTITNAKVGD-LQSTNFVSGRSGWRFGKNGTLEIN---------------------------------------------------------------------GNSGGNGRLVINGQRIDVYDDNNVLR----VRIG-- L                                                            
Consen2   Secondary consensus                  m                         v          l                 l  l             v                                                                                        vaegeks                                                                                                                                                                                                                                                                                                                    d                                                                                   fskal                                 t                                                                                  ennv                                                                                                                                    k                trdvlsfl gk               sk                                              ikfnersdalenaqtelkg                                                                                                     aelttniealaktnidlalrqdedqhkqmvnnakiattqktfaddmsamatk eeirveigedikasileestaradgdeal     q                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      

Consensus 1 (when a gap)
Conservative difference
Consensus 2 (when a gap)
Nonconservative diff.
Other character