fig|6666666.5357.peg.4142   Escherichia coli TY-2482     MSHLVNKQREIIDQRKGEQVRLVNTFKTRRIPTEKMTIMRRRQYVVDHDFLNSG
fig|1040638.4.peg.298   Escherichia coli O104:H4 str. LB226692     MSHLVNKQREIIDQRKGEQVRLVNTFKTRRIPTEKMTIMRRRQYVVDHDFLNSG
Consen1   Primary consensus     MSHLVNKQREIIDQRKGEQVRLVNTFKTRRIPTEKMTIMRRRQYVVDHDFLNSG
Consen2   Secondary consensus                                                           

Consensus 1 (when a gap)
Conservative difference
Consensus 2 (when a gap)
Nonconservative diff.
Other character