┌─ Escherichia coli 1044A (21)  
                                                                    ┌┴─ Escherichia coli O157:H7 EDL933 (1)  
                                                                   ┌┴─ Escherichia coli O55:H7 str. CB9615   
                                                                  ┌┴─ Escherichia coli MS 78-1 (1)  
                                                                 ┌┴─ Escherichia coli K12 (95)  
                                                                ┌┴┬─ Escherichia coli IHE3034   
                                                                │ └┬─ Escherichia coli E110019 (1)  
                                                               ┌┤  └─ Escherichia coli B7A (1)  
┌──────────────────────────────────────────────────────────────┤└─ Escherichia coli H299   
│                                                              └─ Escherichia coli ED1a (1)  
│                                                    ┌── Escherichia coli (3-413/416) IAI39 (2)  
│                                                    │                      ┌─ Escherichia coli (1-404/407) 1827-70 (1)  
│                                                    │                     ┌┴─ Escherichia coli (1-404/407) MS 115-1   
│                                                    │                    ┌┴─ Escherichia coli (3-413/416) 53638 (2)  
│                                                    │                   ┌┴┬─ Escherichia coli (3-413/416) 101-1   
│                                                    │                   │ └┬─ Escherichia coli (1-404/407) MS 187-1   
│                                                    │                  ┌┤  └─ Escherichia coli (3-413/416) B str. REL606 (2)  
│                                                    │                  ││ ┌─ Escherichia coli (4-410/413) B088 (1)  
┤                                                    │                  │└┬┴─ Escherichia coli (1-404/407) 55989 (2)  
│                                                    │                 ┌┤ └┬─ Escherichia coli (3-413/416) B7A (13)  
│                                                    │                 ││  └┬─ Escherichia coli (3-413/416) SE11   
│                                                    │                ┌┤│   └─ fig|6666666.5357.peg.508 TY-2482 (3-413/416) strain  [2] 
│                                                    │                ││└─ Escherichia coli (3-413/416) 2362-75   
│                                                    │                │└┬─ Escherichia coli (4-410/413) O127:H6 str. E2348/69   
│                                                    │                │ └─ Escherichia coli (3-413/416) E2348/69 (1)  
│                                                    │               ┌┤  ┌─ Escherichia coli (3-413/416) H299   
│                                                    │               ││ ┌┴─ Escherichia coli (1-404/407) M718   
│                                                    │               ││┌┴┬─ Escherichia coli (1-404/407) MS 124-1 (3)  
└────────────────────────────────────────────────────┤               │││ └─ Escherichia coli (3-413/416) KO11 (2)  
                                                     │               │└┤ ┌─ Escherichia coli (1-404/407) B185 (3)  
                                                     │               │ │┌┴─ Escherichia coli (4-410/413) str. K-12 substr. DH10B (1)  
                                                     │              ┌┤ └┤ ┌─ Escherichia coli (3-413/416) MS 175-1   
                                                     │              ││  └┬┴─ Escherichia coli (3-413/416) K12 (5)  
                                                     │              ││   └┬─ Escherichia coli (1-404/407) MS 196-1   
                                                     │             ┌┤│    └┬─ Escherichia coli (4-410/413) O157:H7 EDL933 (1)  
                                                     │             │││     └─ Escherichia coli (3-413/416) 1044A (21)  
                                                     │             ││└─ Escherichia coli (3-413/416) 042 (8) [2] 
                                                     │            ┌┤└┬─ Escherichia coli (1-404/407) TA143   
                                                     │            ││ └─ Escherichia coli (3-413/416) SMS-3-5   
                                                     │    ┌───────┤└─ Escherichia coli (1-404/407) MS 69-1   
                                                     │    │       └─ Escherichia coli (3-413/416) B354   
                                                     │    │        ┌─ Escherichia coli (1-406/409) 83972 (3)  
                                                     │    │       ┌┴─ Escherichia coli (1-406/409) O103:H2 str. 12009   
                                                     │    │      ┌┴─ Escherichia coli (1-404/407) CFT073 (2)  
                                                     │    │     ┌┴┬─ Escherichia coli (1-404/407) 536 (2) [2] 
                                                     │    │    ┌┤ └─ Escherichia coli (3-413/416) F11   
                                                     └────┤    │└┬─ Escherichia coli (3-413/416) APEC O1 (7)  
                                                          │   ┌┤ └┬─ Escherichia coli (1-404/407) E24377A (4)  
                                                          │   ││  └─ Escherichia coli (1-406/409) APEC O1 (2)  
                                                          │  ┌┤└─ Escherichia coli (3-413/416) ABU 83972 (10)  
                                                          │ ┌┤└─ Escherichia coli (3-413/416) 2362-75 (1)  
                                                          │┌┤└─ Escherichia coli (3-413/416) WV_060327   
                                                          ││└─ Escherichia coli (3-413/416) H591 (1)  
                                                          └┤┌─ Escherichia coli (3-413/416) IAI39 (2)  
                                                           ││   ┌─ Escherichia coli (1-404/407) MS 69-1   
                                                           └┤  ┌┴─ Escherichia coli (1-404/407) FVEC1302 (2)  
                                                            │ ┌┴─ Escherichia coli (3-413/416) FVEC1412   
                                                            │┌┴─ Escherichia coli (3-413/416) TA143   
                                                            └┤┌─ Escherichia coli (3-413/416) SMS-3-5   
                                                             └┤┌─ Escherichia coli (3-413/416) H299   
                                                              └┤┌─ Escherichia coli (3-413/416) K12 (20)  
                                                               └┤┌─ Escherichia coli (3-413/416) 042 (1)  
                                                                └┤ ┌─ Escherichia coli (3-413/416) MS 107-1   
                                                                 │┌┴─ fig|1040638.4.peg.3241 O104:H4 (1-404/407) str. LB226692 (2) [2] 
                                                                 └┤┌─ Escherichia coli (1-404/407) MS 196-1   
                                                                  └┤┌─ Escherichia coli (1-404/407) H736 (3)  
                                                                   └┤  ┌─ Escherichia coli (1-406/409) B str. REL606 (2)  
                                                                    │ ┌┴─ Escherichia coli (1-404/407) MS 187-1   
                                                                    └┬┴─ Escherichia coli (1-406/409) 101-1 (3)  
                                                                     └┬─ Escherichia coli (1-379/382) B185   
                                                                      └┬─ Escherichia coli (1-406/409) 1125A (5)  
                                                                       └┬─ Escherichia coli (1-404/407) O157:H7 EDL933 (6)  
                                                                        └─ Escherichia coli (3-413/416) 1044A (10)  
  
Inner membrane transport protein YeiM, in cluster with pseudouridine metabolism operon (32)
Probable pyrimidine nucleoside transport protein associated with pseudouridine catabolism (29)
Nucleoside permease NupC (10)
Others (2)