fig|1040638.4.peg.258   Escherichia coli O104:H4 str. LB226692     MSYALKKHPRLTIPPRDKSVVAAPRPAIDENCTHREQVKNAFDFGFSRYEKAMEELSKV
fig|6666666.5357.peg.4193   Escherichia coli TY-2482     MSYALKKHPRLTIPPRDKSVVAAPRPAIDENCTHREQVKNAFDFGFSRYEKAMEELSKV
fig|405955.13.peg.1477   Escherichia coli APEC O1     MSYALKKHPRLTIPPRDKSVVAAPRPAIDENCTHREQVKNAFDFGFSRYEKAMEDLSKV
fig|550676.3.peg.763   Escherichia coli B185     MSCPLKKHTRLSIPPRDKSVVAVPRPAIDENCAHREQVKNAFDFGFSRYEKAMEDLSKV
Consen1   Primary consensus     MSYALKKHPRLTIPPRDKSVVAAPRPAIDENCTHREQVKNAFDFGFSRYEKAMEdLSKV
Consen2   Secondary consensus                                                           e    

Consensus 1 (when a gap)
Conservative difference
Consensus 2 (when a gap)
Nonconservative diff.
Other character