fig|1040638.4.peg.2515
Escherichia coli O104:H4 str. LB226692
MSQKYLIRIAELERLLSEQAEALRQKDQQLSLVEETEAFLRSALARAEEKIEEDEREIEHLRAQIEKLRRMLFGTRSEKLRREVEQAEALLKQREQESDRYSGREDDPLVPRQLRQSRHRRPLPAHLPREIYRLEPEESCCPECGGELDYLGEVSAEQLELVSSALKVIRTERVKKACTKCDCIVEAPAPSRPIERGIAGPGLLARVLTGKYCEHLPLYRQSEIFARQGVELSRALLSNWVDACCQLMTPLNDALYSYVMNTRKVHTDDTPVKVLAPGRKKAKTGYIWTYVRDDRNAGSPEPPAVWFAYSPDHQGKHPEQHLRPFRGILQADAFAGYDRLFSAEREGGALTEAGCWAHARRKIHDVYISTKSATAEEALKLIGELYAIEHEIRGLPVSERLAVRQMQSK
P
LLTSLYKLMQEKEHTLSKKCRLRDAFRYIRKHWVALCNFCDDGLAEADNNTAERALRAVCLGKKNSYDLCQILSPKRPYAAPGASLYRGLKNLKQSDCILDFTNSYSGILAP
fig|216592.1.peg.2540
Escherichia coli 042
MSQKYLIRIAELERLLSEQAEALRQKDQQLSLVEETEAFLRSALARAEEKIEEDEREIEHLRAQIEKLRRMLFGTRSEKLRREVEQAEALLKQREQESDRYSGREDDPLVPRQLRQSRHRRPLPAHLPREIYRLEPEESCCPECGGELDYLGEVSAEQLELVSSALKVIRTERVKKACTKCDCIVEAPAPSRPIERGIAGPGLLARVLTGKYCEHLPLYRQSEIFARQGVELSRALLSNWVDACCQLMTPLNDALYSYVMNTRKVHTDDTPVKVLAPGRKKAKTGYIWTYVRDDRNAGSPEPPAVWFAYSPDHQGKHPEQHLRPFRGILQADAFAGYDRLFSAEREGGALTEAGCWAHARRKIHDVYISTKSATAEEALKLIGELYAIEHEIRGLPVSERLAVRQMQSK
P
LLTSLYKLMQEKEHTLSKKCRLRDAFRYIRKHWVALCNFCDDGLAEADNNTAERALRAVCLGKKNSYDLCQILSPKRPYAAPGASLYRGLKNLKQSDCILDFTNSYSGILAP
fig|216592.3.peg.4763
Escherichia coli 042
MSQKYLIRIAELERLLSEQAEALRQKDQQLSLVEETEAFLRSALARAEEKIEEDEREIEHLRAQIEKLRRMLFGTRSEKLRREVEQAEALLKQREQESDRYSGREDDPLVPRQLRQSRHRRPLPAHLPREIYRLEPEESCCPECGGELDYLGEVSAEQLELVSSALKVIRTERVKKACTKCDCIVEAPAPSRPIERGIAGPGLLARVLTGKYCEHLPLYRQSEIFARQGVELSRALLSNWVDACCQLMTPLNDALYSYVMNTRKVHTDDTPVKVLAPGRKKAKTGYIWTYVRDDRNAGSPEPPAVWFAYSPDHQGKHPEQHLRPFRGILQADAFAGYDRLFSAEREGGALTEAGCWAHARRKIHDVYISTKSATAEEALKLIGELYAIEHEIRGLPVSERLAVRQMQSK
P
LLTSLYKLMQEKEHTLSKKCRLRDAFRYIRKHWVALCNFCDDGLAEADNNTAERALRAVCLGKKNSYDLCQILSPKRPYAAPGASLYRGLKNLKQSDCILDFTNSYSGILAP
fig|585055.6.peg.3312
Escherichia coli 55989
MSQKYLIRIAELERLLSEQAEALRQKDQQLSLVEETEAFLRSALARAEEKIEEDEREIEHLRAQIEKLRRMLFGTRSEKLRREVEQAEALLKQREQESDRYSGREDDPLVPRQLRQSRHRRPLPAHLPREIYRLEPEESCCPECGGELDYLGEVSAEQLELVSSALKVIRTERVKKACTKCDCIVEAPAPSRPIERGIAGPGLLARVLTGKYCEHLPLYRQSEIFARQGVELSRALLSNWVDACCQLMTPLNDALYSYVMNTRKVHTDDTPVKVLAPGRKKAKTGYIWTYVRDDRNAGSPEPPAVWFAYSPDHQGKHPEQHLRPFRGILQADAFAGYDRLFSAEREGGALTEAGCWAHARRKIHDVYISTKSATAEEALKLIGELYAIEHEIRGLPVSERLAVRQMQSK
P
LLTSLYKLMQEKEHTLSKKCRLRDAFRYIRKHWVALCNFCDDGLAEADNNTAERALRAVCLGKKNSYDLCQILSPKRPYAAPGASLYRGLKNLKQSDCILDFTNSYSGILAP
fig|585055.8.peg.3316
Escherichia coli 55989
MSQKYLIRIAELERLLSEQAEALRQKDQQLSLVEETEAFLRSALARAEEKIEEDEREIEHLRAQIEKLRRMLFGTRSEKLRREVEQAEALLKQREQESDRYSGREDDPLVPRQLRQSRHRRPLPAHLPREIYRLEPEESCCPECGGELDYLGEVSAEQLELVSSALKVIRTERVKKACTKCDCIVEAPAPSRPIERGIAGPGLLARVLTGKYCEHLPLYRQSEIFARQGVELSRALLSNWVDACCQLMTPLNDALYSYVMNTRKVHTDDTPVKVLAPGRKKAKTGYIWTYVRDDRNAGSPEPPAVWFAYSPDHQGKHPEQHLRPFRGILQADAFAGYDRLFSAEREGGALTEAGCWAHARRKIHDVYISTKSATAEEALKLIGELYAIEHEIRGLPVSERLAVRQMQSK
P
LLTSLYKLMQEKEHTLSKKCRLRDAFRYIRKHWVALCNFCDDGLAEADNNTAERALRAVCLGKKNSYDLCQILSPKRPYAAPGASLYRGLKNLKQSDCILDFTNSYSGILAP
fig|656379.3.peg.4401
Escherichia coli FVEC1302
MSQKYLIRIAELERLLSEQAEALRQKDQQLSLVEETEAFLRSALARAEEKIEEDEREIEHLRAQIEKLRRMLFGTRSEKLRREVEQAEALLKQREQESDRYSGREDDPLVPRQLRQSRHRRPLPA
Y
LPREIYRLEPEESCCPECGGELDYLGEVSAEQLELVSSALKVIRTERVKKACTKCDCIVEAPAPSRPIERGIAGPGLLARVLTGKYCEHLPLYRQSEIFARQGVELSRALLSNWVDACCQLMTPLNDALYSYVMNTRKVHTDDTPVKVLAPGRKKAKTGYIWTYVRDDRNAGSPEPPAVWFAYSPDHQGKHPEQHLRPFRGILQADAFAGYDRLFSAEREGGALTEAGCWAHARRKIHDVYISTKSATAEEALKLIGELYAIEHEIRGLPVSERLAVRQMQSK
P
LLTSLYKLMQEKEHTLSKKCRLRDAFRYIRKHWVALCNFCDDGLAEADNNTAERALRAVCLGKKNSYDLCQILSPKRPYAAPGASLYRGLKNLKQSDCILDFTNSYSGILAP
fig|656380.3.peg.4314
Escherichia coli FVEC1412
MSQKYLIRIAELERLLSEQAEALRQKDQQLSLVEETEAFLRSALARAEEKIEEDEREIEHLRAQIEKLRRMLFGTRSEKLRREVEQAEALLKQREQESDRYSGREDDPLVPRQLRQSRHRRPLPA
Y
LPREIYRLEPEESCCPECGGELDYLGEVSAEQLELVSSALKVIRTERVKKACTKCDCIVEAPAPSRPIERGIAGPGLLARVLTGKYCEHLPLYRQSEIFARQGVELSRALLSNWVDACCQLMTPLNDALYSYVMNTRKVHTDDTPVKVLAPGRKKAKTGYIWTYVRDDRNAGSPEPPAVWFAYSPDHQGKHPEQHLRPFRGILQADAFAGYDRLFSAEREGGALTEAGCWAHARRKIHDVYISTKSATAEEALKLIGELYAIEHEIRGLPVSERLAVRQMQSK
P
LLTSLYKLMQEKEHTLSKKCRLRDAFRYIRKHWVALCNFCDDGLAEADNNTAERALRAVCLGKKNSYDLCQILSPKRPYAAPGASLYRGLKNLKQSDCILDFTNSYSGILAP
fig|585056.7.peg.3541
Escherichia coli UMN026
MSQKYLIRIAELERLLSEQAEALRQKDQQLSLVEETEAFLRSALARAEEKIEEDEREIEHLRAQIEKLRRMLFGTRSEKLRREVEQAEALLKQREQESDRYSGREDDPLVPRQLRQSRHRRPLPA
Y
LPREIYRLEPEESCCPECGGELDYLGEVSAEQLELVSSALKVIRTERVKKACTKCDCIVEAPAPSRPIERGIAGPGLLARVLTGKYCEHLPLYRQSEIFARQGVELSRALLSNWVDACCQLMTPLNDALYSYVMNTRKVHTDDTPVKVLAPGRKKAKTGYIWTYVRDDRNAGSPEPPAVWFAYSPDHQGKHPEQHLRPFRGILQADAFAGYDRLFSAEREGGALTEAGCWAHARRKIHDVYISTKSATAEEALKLIGELYAIEHEIRGLPVSERLAVRQMQSK
P
LLTSLYKLMQEKEHTLSKKCRLRDAFRYIRKHWVALCNFCDDGLAEADNNTAERALRAVCLGKKNSYDLCQILSPKRPYAAPGASLYRGLKNLKQSDCILDFTNSYSGILAP
fig|749549.3.peg.27
Escherichia coli MS 198-1
MSQKYLIRIAELERLLSEQAEALRQ
R
D
L
QLSLVEETEAFLRSALARAEEKIEEDEREIEHLRAQIEKLRRMLFGTRSEKLRREVEQAEALLKQREQESDRYSGREDDPLVPRQLRQSRHRRPLPA
Y
LPREIYRLEPEESCCPECGGELDYLGEVSAEQLELVSSALKVIRTERVKKACTKCDCIVEAPAPSRPIERGIAGPGLLARVLTGKYCEHLPLYRQSEIFARQGVELSRALLSNWVDACCQLMTPLNDALYSYVMNTRKVHTDDTPVKVLAPGRKKAKTGYIWTYVRDDRNAGSPEPPAVWFAYSPDHQGKHPEQHLRPFRGILQADAFAGYDRLFSAEREGGALTEAGCWAHARRKIHDVYISTKSATAEEALKLIGELYAIEHEIRGLPVSERLAVRQMQSK
P
LLTSLYKLMQEKEHTLSKKCRLRDAFRYIRKHWVALCNFCDDGLAEADNNTAERALRAVCLGKKNSYDLCQILSPKRPYAAPGASLYRGLKNLKQSDCILDFTNSYSGILAP
fig|585055.8.peg.5176
Escherichia coli 55989
MSQKYLIRIAELERLLSEQAEALRQKDQQLSLVEETEAFLRSAL
T
RAEEKIEEDEREIEHLRAQIEKLRRMLFGTRSEKLRREVE
L
AEALLKQREQ
D
SDRYSGREDDP
Q
VPRQLRQSRHRRPLPAHLPREI
H
RLEPEESCCPECGGELDYLGEVSAEQLELVSSALKVIRTERVKKACTKCDCIVEAPAPSRPIERGIAGPGLLARVLTGKYCEHLPLYRQSEIFARQGVELSRALLSNWVDACCQLMTP
V
NDALY
R
YVMNTRKVHTDDTPVKVLAPG
Q
KKAKTG
R
IWTYVRDDRN
V
GS
SS
PPAVWFAYSP
NR
QGKHPEQHLRPFRGILQADAF
T
GYDRLFSAEREGGALTE
VA
CWAHARRKIHDVYIS
S
KSATAEEALK
R
I
S
ELYAIE
D
EIRGLP
EL
ERLAVRQ
QR
SK
V
LLTSL
HEW
M
V
EK
NG
TLSKK
S
RL
GE
AF
S
Y
VLNQ
W
D
ALC
YYS
DDGLAEADNN
A
AERALRAVCLGKKNSYDLCQILSPKRPYAAPGASLYRGLKNLKQSDCILDFTNSYSGILAP
fig|585397.6.peg.120
Escherichia coli ED1a
MSQKYLIRIAELERLLSEQAEALRQKDQQLSLVEETEAFLRSAL
T
RAEEKIEEDEREIEHLRAQIEKLRRMLFGTRSEKLRREVE
L
AEALLKQREQ
D
SDRYSGREDDP
Q
VPRQLRQSRHRRPLPAHLPREI
H
RLEPEESCCPECGGELDYLGEVSAEQLELVSSALKVIRTERVKKACTKCDCIVEAPAPSRPIERGIAGPGLLARVLTGKYCEHLPLYRQSEIFARQGVELSRALLSNWVDACCQLMTP
V
NDALY
R
YVMNTRKVHTDDTPVKVLAPG
Q
KKAKTG
R
IWTYVRDDRN
V
GS
SS
PPAVWFAYSP
NR
QGKHPEQHLRPFRGILQADAF
T
GYDRLFSAEREGGALTE
VA
CWAHARRKIHDVYIS
S
KSATAEEALK
R
I
S
ELYAIE
D
EIRGLP
EL
ERLAVRQ
QR
SK
V
LLTSL
HEW
M
V
EK
NG
TLSKK
S
RL
GE
AF
S
Y
VLNQ
W
D
ALC
YYS
DDGLAEADNN
A
AERALRAVCLGKKNSYDLCQILSPKRPYAAPGASLYRGLKNLKQSDCILDFTNSYSGILAP
fig|869729.3.peg.4681
Escherichia coli UM146
MS
R
KYLIRI
T
ELERLLSEQAEALRQKDQQLSLVEETEAFLRSALARAEEKIEE
E
ERE
T
EHLRAQIEKLRRMLFGTRSEKLRREVEQAEALL
N
QR
R
Q
D
SDRYSG
W
EDDP
Q
VPRQLRQSRHRRPLPAHLPREI
H
RLE
S
EESCCPECG
S
ELDYLGEVSAEQLELVSSALKVIRT
V
RVKKACTKCDCIVEAPAPSRPIERGIAG
S
GLLARVLTGKYCEHLPLYRQSEIFARQG
A
ELSRALLSNWVDACCQLMTPLNDALY
R
YVMNTRKVHTDD
I
PVKVLAPGRKKAKTG
R
IWTYVRDDRNAGS
S
EPPAVWFAYSPD
R
QGKHP
V
QHLRPFRGILQADAF
S
GYDRLFSAEREGGALTE
VA
CWAHARRKIHDVYIS
S
KS
T
TAEEALK
R
I
S
ELYAIE
D
EIRGLP
E
SERLA
A
RQ
QR
SK
A
LLTSL
HEW
M
V
EK
NG
TLSKK
S
RL
GE
AF
S
Y
VLNQ
W
D
ALC
YYS
DDGLAEADNNTAERALRAVCLGKKNSYDLCQILSPKRPYAAPGASLYRGLKNLKQSDCILDFTNSYSGILAP
fig|364106.7.peg.4785
Escherichia coli UTI89
MS
R
KYLIRI
T
ELERLLSEQAEALRQKDQQLSLVEETEAFLRSALARAEEKIEE
E
ERE
T
EHLRAQIEKLRRMLFGTRSEKLRREVEQAEALL
N
QR
R
Q
D
SDRYSG
W
EDDP
Q
VPRQLRQSRHRRPLPAHLPREI
H
RLE
S
EESCCPECG
S
ELDYLGEVSAEQLELVSSALKVIRT
V
RVKKACTKCDCIVEAPAPSRPIERGIAG
S
GLLARVLTGKYCEHLPLYRQSEIFARQG
A
ELSRALLSNWVDACCQLMTPLNDALY
R
YVMNTRKVHTDD
I
PVKVLAPGRKKAKTG
R
IWTYVRDDRNAGS
S
EPPAVWFAYSPD
R
QGKHP
V
QHLRPFRGILQADAF
S
GYDRLFSAEREGGALTE
VA
CWAHARRKIHDVYIS
S
KS
T
TAEEALK
R
I
S
ELYAIE
D
EIRGLP
E
SERLA
A
RQ
QR
SK
A
LLTSL
HEW
M
V
EK
NG
TLSKK
S
RL
GE
AF
S
Y
VLNQ
W
D
ALC
YYS
DDGLAEADNNTAERALRAVCLGKKNSYDLCQILSPKRPYAAPGASLYRGLKNLKQSDCILDFTNSYSGILAP
fig|364106.8.peg.4784
Escherichia coli UTI89
MS
R
KYLIRI
T
ELERLLSEQAEALRQKDQQLSLVEETEAFLRSALARAEEKIEE
E
ERE
T
EHLRAQIEKLRRMLFGTRSEKLRREVEQAEALL
N
QR
R
Q
D
SDRYSG
W
EDDP
Q
VPRQLRQSRHRRPLPAHLPREI
H
RLE
S
EESCCPECG
S
ELDYLGEVSAEQLELVSSALKVIRT
V
RVKKACTKCDCIVEAPAPSRPIERGIAG
S
GLLARVLTGKYCEHLPLYRQSEIFARQG
A
ELSRALLSNWVDACCQLMTPLNDALY
R
YVMNTRKVHTDD
I
PVKVLAPGRKKAKTG
R
IWTYVRDDRNAGS
S
EPPAVWFAYSPD
R
QGKHP
V
QHLRPFRGILQADAF
S
GYDRLFSAEREGGALTE
VA
CWAHARRKIHDVYIS
S
KS
T
TAEEALK
R
I
S
ELYAIE
D
EIRGLP
E
SERLA
A
RQ
QR
SK
A
LLTSL
HEW
M
V
EK
NG
TLSKK
S
RL
GE
AF
S
Y
VLNQ
W
D
ALC
YYS
DDGLAEADNNTAERALRAVCLGKKNSYDLCQILSPKRPYAAPGASLYRGLKNLKQSDCILDFTNSYSGILAP
fig|655817.3.peg.5076
Escherichia coli ABU 83972
MS
R
KYLIRI
T
ELERLLSEQAEALRQKDQQLSLVEETEAFLRSALARAEEKIEE
E
ERE
T
EHLRAQIEKLRRMLFGTRSEKL
Q
REVEQAEA
Q
LKQREQESDRYSGREDDP
Q
VPRQLRQSRHRRPLPAHLPREI
H
RLEPEESCCPECG
S
ELDYLGEVSAEQLELVSSALKVIRT
V
RVKKACTKCDCIVEAPAPSRPIERGIAG
S
GLLARVL
A
G
Q
YCEHLPLYRQSEIFARQG
A
ELSRALLSNWVDACCQLMTPLNDALY
R
YVMNTRKVHTDD
I
PVKVLAPGRKKAKTG
R
IWTYVRDDRNAGS
S
-----------
D
R
QGKHP
V
QHLRPFRGILQADAF
S
GYDRLFSAEREGGALTE
VA
CWAHARRKIHDVYIS
S
KS
T
TAEEALK
R
I
S
ELYAIE
D
EIRGLP
E
SERLA
A
RQ
QR
SK
A
LLTSL
HEW
M
V
EK
NG
TLSKK
S
RL
GE
AF
S
Y
VLNQ
W
D
ALC
YYS
DDGLAEADNNTAERALRAVCLGKKNSYDLCQILSPKRPYAAPGASLYRGLKNLKQSDCILDFTNSYSGILAP
Consen1
Primary consensus
MSqKYLIRIaELERLLSEQAEALRQKDQQLSLVEETEAFLRSALaRAEEKIEEdEREiEHLRAQIEKLRRMLFGTRSEKLRREVEqAEALLkQReQeSDRYSGrEDDPlVPRQLRQSRHRRPLPAhLPREIyRLEpEESCCPECGgELDYLGEVSAEQLELVSSALKVIRTeRVKKACTKCDCIVEAPAPSRPIERGIAGpGLLARVLTGKYCEHLPLYRQSEIFARQGvELSRALLSNWVDACCQLMTPlNDALYsYVMNTRKVHTDDtPVKVLAPGrKKAKTGyIWTYVRDDRNaGSpePPAVWFAYSPdhQGKHPeQHLRPFRGILQADAFaGYDRLFSAEREGGALTEagCWAHARRKIHDVYIStKSaTAEEALKlIgELYAIEhEIRGLPvsERLAvRQmqSK
LLTSLyklMqEKehTLSKKcRLrdAFrYirkhWvALCnfcDDGLAEADNNtAERALRAVCLGKKNSYDLCQILSPKRPYAAPGASLYRGLKNLKQSDCILDFTNSYSGILAP
Consen2
Secondary consensus
r
t
t
e
t
l
n
r
d
w
q
y
h
s
s
v
s
a
v
r
i
q
r
v
ss
nr
v
va
s
t
r
s
d
el
a
qr
hew
v
ng
s
ge
s
vlnq
d
yys
a
Consensus 1
(when a gap)
Conservative difference
Consensus 2
(when a gap)
Nonconservative diff.
Other character