fig|1040638.4.peg.218   Escherichia coli O104:H4 str. LB226692     MVFSKFKKKTRRVATEIKKFEKRDLAQAVIGVGVMVDFISRIMSVLADSWGCWCGLPIDEKTSYYLACYL
fig|6666666.5357.peg.2019   Escherichia coli TY-2482     MVFSKFKKKTRRVATEIKKFEKRDLAQAVIGVGVMVDFISRIMSVLADSWGCWCGLPIDEKTSYYLACYL
fig|749538.3.peg.335   Escherichia coli MS 116-1 (26-95/95)     LVFSKFKKKTRRVATEIKKFEKRDLAQAVIGVGVMVDFISRIMSVLADSWGCWCGLPIDEKTSNYLAYYL
fig|749550.3.peg.2848   Escherichia coli MS 200-1     MVFSKFKKKTRRVATEIKKFEKRDLAQAVIGVGVMVDFISRIMSVLADSWGCWCGLPIDEKTSNYLAYYL
Consen1   Primary consensus     MVFSKFKKKTRRVATEIKKFEKRDLAQAVIGVGVMVDFISRIMSVLADSWGCWCGLPIDEKTSnYLAcYL
Consen2   Secondary consensus                                                                    y   y  

Consensus 1 (when a gap)
Conservative difference
Consensus 2 (when a gap)
Nonconservative diff.
Other character