┌─ Escherichia coli (54-106/113) KO11   
                                                                ┌┼─ Escherichia coli (54-106/113) W   
                                                               ┌┤└─ Escherichia coli (54-106/113) W   
                                                         ┌─────┤└─ Escherichia coli (54-111/113) M605   
                                                         │     └── Escherichia coli (54-106/113) MS 69-1   
                                              ┌──────────┤          ┌─ Escherichia coli (54-121/141) B7A   
                                              │          │       ┌──┴─ Escherichia coli (54-121/141) B7A   
                                              │          └───────┤ ┌─ Escherichia coli (54-121/141) ABU 83972   
                                              │                  └─┼─ Escherichia coli (54-121/141) MS 45-1   
                               ┌──────────────┤                    └─ Escherichia coli (54-121/141) 83972   
                               │              │┌── Escherichia coli (54-110/113) MS 115-1   
                               │              ││ ┌─ Escherichia coli (54-110/113) DH1   
                               │              └┤ ├─ Escherichia coli (54-110/113) W3110   
                               │               │ ├─ Escherichia coli (54-110/113) str. K-12 substr. DH10B   
                               │               └─┼─ Escherichia coli (54-110/113) str. K-12 substr. MG1655   
                    ┌──────────┤                 ├─ Escherichia coli (54-110/113) str. K-12 substr. MG1655   
                    │          │                 ├─ Escherichia coli (75-131/134) str. K-12 substr. DH10B   
                    │          │                 ├─ Escherichia coli (54-110/113) K12   
                    │          │                 └─ Escherichia coli (54-110/113) BW2952   
                    │          │          ┌────────── Escherichia coli (54-107/109) MS 146-1   
                    │          │          │     ┌─ Escherichia coli (54-107/109) DH1   
                    │          └──────────┤     ├─ Escherichia coli (54-107/109) W3110   
 ┌──────────────────┤                     │     ├─ Escherichia coli (54-107/109) str. K-12 substr. DH10B   
 │                  │                     └─────┼─ Escherichia coli (31-84/86) str. K-12 substr. MG1655   
 │                  │                           ├─ Escherichia coli (54-107/109) str. K-12 substr. MG1655   
 │                  │                           ├─ Escherichia coli (31-84/86) str. K-12 substr. DH10B   
┌┤                  │                           ├─ Escherichia coli (54-107/109) K12   
││                  │                           └─ Escherichia coli (54-107/109) BW2952   
││                  └─────────────────── Escherichia coli (53-107/107) MS 115-1   
││                         ┌── Escherichia coli (75-136/143) SMS-3-5   
│└──────────────────────┬──┴───────── Escherichia coli (54-115/121) SE11   
│                       └┬─ Escherichia coli (75-136/143) MS 196-1   
┤                        └─ Escherichia coli (75-136/143) MS 116-1   
│                            ┌─ Escherichia coli (54-125/125) ATCC 8739   
│          ┌─────────────────┼─ Escherichia coli (36-107/107) ETEC H10407   
│          │                 └─ Escherichia coli (36-107/107) ATCC 8739   
│          │                                   ┌─ Escherichia coli (54-122/123) E22   
│          │                                  ┌┴─ Escherichia coli (54-122/123) E22   
│          │  ┌───────────────────────────────┴─ Escherichia coli (54-122/123) O103:H2 str. 12009   
└──────────┤  │                            ┌─ Escherichia coli (54-108/108) E22   
           │  │                           ┌┴─ Escherichia coli (54-108/108) E22   
           │  │                           │ ┌─ Escherichia coli (54-125/125) E110019   
           │  │                           │ ├─ Escherichia coli (54-125/125) HS   
           │  │                           │┌┼─ Escherichia coli (54-125/125) O26:H11 str. 11368   
           │  │                           ││├─ Escherichia coli (54-125/125) HS   
           └──┤                           ││└─ Escherichia coli (54-125/125) E110019   
              │                           ││┌─── Escherichia coli (54-125/125) SE15   
              │                           │││         ┌─ Escherichia coli (54-124/124) 1044A   
              │                           │││         ├─ Escherichia coli (54-124/124) 1212A   
              │                           │││         ├─ Escherichia coli (54-124/124) E110019   
              │                           │││         ├─ Escherichia coli (54-124/124) E2348/69   
              │                           │││         ├─ Escherichia coli (54-124/124) O111:H- str. 11128   
              │                           │││         ├─ Escherichia coli (54-124/124) O157:H7 str. EC4024   
              └───────────────────────────┤││         ├─ Escherichia coli (54-124/124) O157:H7 str. EC4045   
                                          │││         ├─ Escherichia coli (54-124/124) O157:H7 str. EC4113   
                                          │││         ├─ Escherichia coli (54-124/124) O157:H7 str. EC4196   
                                          │││         ├─ Escherichia coli (54-124/124) O157:H7 str. EC4401   
                                          │││         ├─ Escherichia coli (54-124/124) O157:H7 str. EC4501   
                                          │││         ├─ Escherichia coli (54-124/124) O157:H7 str. EC869   
                                          │││         ├─ Escherichia coli (54-124/124) O157:H7 str. EC869   
                                          │││         ├─ Escherichia coli (54-124/124) O157:H7 str. Sakai   
                                          │││         ├─ Escherichia coli (54-124/124) O157:H7 str. TW14588   
                                          │││        ┌┼─ Escherichia coli (54-124/124) O26:H11 str. 11368   
                                          │││        │├─ Escherichia coli (54-124/124) O157:H7 str. TW14359   
                                          │││        │├─ Escherichia coli (54-124/124) O157:H7 str. FRIK966   
                                          │││        │├─ Escherichia coli (54-124/124) O157:H7 str. EC869   
                                          │││        │├─ Escherichia coli (54-124/124) O157:H7 str. EC508   
                                          └┤│        │├─ Escherichia coli (7-77/77) O157:H7 str. EC4486   
                                           ││        │├─ Escherichia coli (54-124/124) O157:H7 str. EC4206   
                                           ││        │├─ Escherichia coli (54-124/124) O157:H7 str. EC4115   
                                           ││       ┌┤├─ Escherichia coli (54-124/124) O157:H7 str. EC4076   
                                           ││       ││├─ Escherichia coli (54-124/124) O157:H7 str. EC4042   
                                           ││       ││├─ Escherichia coli (54-124/124) O157:H7   
                                           ││       ││├─ Escherichia coli (7-77/77) MS 182-1   
                                           ││       ││├─ Escherichia coli (54-124/124) E110019   
                                           ││       ││├─ Escherichia coli (54-124/124) 536A   
                                           ││       ││└─ Escherichia coli (54-124/124) 1125A   
                                           ││       │└─ Escherichia coli O127:H6 str. E2348/69   
                                           ││      ┌┤  ┌─ Escherichia coli (54-124/124) B7A   
                                           ││      ││  ├─ Escherichia coli (54-124/124) ED1a   
                                           ││      ││  ├─ Escherichia coli (54-124/124) ED1a   
                                           ││      ││  ├─ Escherichia coli (54-124/124) ED1a   
                                           ││      ││  ├─ Escherichia coli (54-124/124) ETEC H10407   
                                           ││      ││  ├─ Escherichia coli (54-124/124) MS 196-1   
                                           ││      ││  ├─ Escherichia coli (54-124/124) NC101   
                                           ││      │└──┼─ Escherichia coli (54-124/124) TA271   
                                           ││     ┌┤   ├─ Escherichia coli (54-124/124) O26:H11 str. 11368   
                                           ││     ││   ├─ Escherichia coli (54-124/124) MS 200-1   
                                           ││     ││   ├─ Escherichia coli (54-124/124) H299   
                                           ││     ││   ├─ Escherichia coli (54-124/124) ED1a   
                                           ││     ││   ├─ Escherichia coli (54-124/124) ED1a   
                                           └┤  ┌──┤│   ├─ Escherichia coli (54-124/124) ED1a   
                                            │  │  ││   ├─ Escherichia coli (54-124/124) B7A   
                                            │  │  ││   └─ Escherichia coli (54-124/124) B str. REL606   
                                            │  │  │└─ Escherichia coli (54-124/124) ETEC H10407   
                                            │  │  └─ Escherichia coli (54-125/125) MS 107-1   
                                            │  │         ┌─ Escherichia coli (54-125/125) CFT073   
                                            │  │        ┌┼─ Escherichia coli (54-125/125) MS 69-1   
                                            │  │       ┌┤└─ Escherichia coli (54-125/125) CFT073   
                                            │  │     ┌─┤└──── Escherichia coli (54-125/125) MS 78-1   
                                            │ ┌┤   ┌─┤ └─ Escherichia coli (54-125/125) TA271   
                                            │ ││  ┌┤ └─ Escherichia coli (54-124/124) M718   
                                            │ ││ ┌┤└─ Escherichia coli (54-125/125) 2362-75   
                                            │ ││┌┤└─ Escherichia coli (54-125/125) M605   
                                            │ │││└─── Escherichia coli (54-125/127) MS 107-1   
                                            │ │││ ┌─ Escherichia coli (54-124/124) MS 84-1   
                                            │ │││┌┴─ Escherichia coli str. K-12 substr. DH10B   
                                            │ ││││┌─ Escherichia coli (7-77/77) 042   
                                            │ │└┤│├─ Escherichia coli (54-124/124) 536   
                                            │ │ ││├─ Escherichia coli (54-124/124) 536   
                                            │ │ ││├─ Escherichia coli (54-124/124) 83972   
                                            │ │ ││├─ Escherichia coli (54-124/124) BW2952   
                                            │ │ ││├─ Escherichia coli (54-124/124) CFT073   
                                            │ │ ││├─ Escherichia coli (54-124/124) ETEC H10407   
                                            │ │ └┤├─ Escherichia coli (54-124/124) F11   
                                            │ │  │├─ Escherichia coli (54-124/124) IHE3034   
                                            │ │  │├─ Escherichia coli (54-124/124) M605   
                                            │ │  │├─ Escherichia coli (54-124/124) MS 198-1   
                                            │ │  │├─ Escherichia coli (54-124/124) MS 45-1   
                                            │ │  │├─ Escherichia coli (54-124/124) UM146   
                                            │┌┤  │├─ Escherichia coli (54-124/124) UTI89   
                                            │││  │├─ Escherichia coli (54-124/124) str. K-12 substr. DH10B   
                                            │││  └┼─ Escherichia coli (54-124/124) str. K-12 substr. MG1655   
                                            │││   ├─ Escherichia coli (54-124/124) str. K-12 substr. MG1655   
                                            │││   ├─ Escherichia coli (54-124/124) W3110   
                                            │││   ├─ Escherichia coli (54-124/124) UTI89   
                                            │││   ├─ Escherichia coli (54-124/124) SE15   
                                            │││   ├─ Escherichia coli (54-124/124) MS 21-1   
                                            │││   ├─ Escherichia coli (54-124/124) MS 146-1   
                                            │││   ├─ Escherichia coli (54-124/124) K12   
                                            │││   ├─ Escherichia coli (54-124/124) F11   
                                            │││   ├─ Escherichia coli (54-124/124) F11   
                                            │││   ├─ Escherichia coli (54-124/124) DH1   
                                            │││   ├─ Escherichia coli (54-124/124) CFT073   
                                            │││   ├─ Escherichia coli (54-124/124) ABU 83972   
                                            │││   ├─ Escherichia coli (54-124/124) 536   
                                            └┤│   ├─ Escherichia coli (54-124/124) 536   
                                             ││   ├─ Escherichia coli (54-124/124) 042   
                                             ││   └─ fig|1040638.4.peg.3578 O104:H4 (54-124/124) str. LB226692   
                                             │└─ Escherichia coli (54-125/125) MS 145-7   
                                             │┌─ Escherichia coli (54-124/124) M718   
                                             ││ ┌─ Escherichia coli (54-124/124) IHE3034   
                                             ││ ├─ Escherichia coli (54-124/124) UM146   
                                             ││┌┼─ Escherichia coli (54-124/124) UTI89   
                                             │││├─ Escherichia coli (54-124/124) UTI89   
                                             │││└─ Escherichia coli (54-124/124) NC101   
                                             │││ ┌─ Escherichia coli (54-124/124) 1044A   
                                             │││ ├─ Escherichia coli (54-124/124) 1212A   
                                             │││ ├─ Escherichia coli (54-124/124) O157:H7   
                                             │││ ├─ Escherichia coli (54-124/124) O157:H7 EDL933   
                                             │││ ├─ Escherichia coli (54-124/124) O157:H7 str. EC4042   
                                             │││ ├─ Escherichia coli (54-124/124) O157:H7 str. EC4076   
                                             │││ ├─ Escherichia coli (54-124/124) O157:H7 str. EC4115   
                                             └┤│ ├─ Escherichia coli (54-124/124) O157:H7 str. EC4206   
                                              ││ ├─ Escherichia coli (54-124/124) O157:H7 str. EC4486   
                                              ││ ├─ Escherichia coli (54-124/124) O157:H7 str. EC508   
                                              ││ ├─ Escherichia coli (54-124/124) O157:H7 str. FRIK966   
                                              ││ ├─ Escherichia coli (54-124/124) O157:H7 str. TW14359   
                                              ││┌┼─ Escherichia coli (54-124/124) O55:H7 str. CB9615   
                                              │││├─ Escherichia coli (54-124/124) O157:H7 str. TW14588   
                                              │││├─ Escherichia coli (54-124/124) O157:H7 str. Sakai   
                                              │││├─ Escherichia coli (54-124/124) O157:H7 str. EC869   
                                              │││├─ Escherichia coli (54-124/124) O157:H7 str. EC4501   
                                              │││├─ Escherichia coli (54-124/124) O157:H7 str. EC4401   
                                              │││├─ Escherichia coli (54-124/124) O157:H7 str. EC4196   
                                              │││├─ Escherichia coli (54-124/124) O157:H7 str. EC4113   
                                              └┤│├─ Escherichia coli (54-124/124) O157:H7 str. EC4045   
                                               ││├─ Escherichia coli (54-124/124) O157:H7 str. EC4024   
                                               ││├─ Escherichia coli (54-124/124) O157:H7 EDL933   
                                               ││├─ Escherichia coli (54-124/124) 536A   
                                               ││└─ Escherichia coli (54-124/124) 1125A   
                                               ││              ┌─ Escherichia coli (54-125/125) CFT073   
                                               ││              ├─ Escherichia coli (54-125/125) FVEC1302   
                                               ││              ├─ Escherichia coli (54-125/125) MS 198-1   
                                               ││             ┌┼─ Escherichia coli (54-125/125) UMN026   
                                               ││             │├─ Escherichia coli (54-125/125) MS 69-1   
                                               ││             │├─ Escherichia coli (54-125/125) FVEC1412   
                                               ││            ┌┤└─ Escherichia coli (54-125/125) CFT073   
                                               ││            ││ ┌─ Escherichia coli (54-125/125) ABU 83972   
                                               ││            ││┌┴─ Escherichia coli 83972   
                                               ││           ┌┤└┤┌─ Escherichia coli (7-78/78) BL21   
                                               ││           ││ └┼─ Escherichia coli (DE3 7-78/78) BL21(DE3)   
                                               ││           ││  └─ Escherichia coli (7-78/78) B str. REL606   
                                               ││       ┌───┤└─ fig|1040638.4.peg.216 O104:H4 str. LB226692   
                                               ││       │   │┌─ Escherichia coli (54-125/125) MS 119-7   
                                               ││       │   └┼─ Escherichia coli (54-125/125) S88   
                                               ││       │    └─ Escherichia coli (54-125/125) APEC O1   
                                               ││      ┌┤┌─ Escherichia coli (54-125/125) 042   
                                               ││      ││├─ Escherichia coli (54-125/125) 55989   
                                               └┤      ││├─ Escherichia coli (54-125/125) B185   
                                                │      │└┼─ Escherichia coli (54-125/125) MS 21-1   
                                                │      │ ├─ Escherichia coli (54-125/125) 55989   
                                                │     ┌┤ ├─ Escherichia coli (54-125/125) 042   
                                                │     ││ └─ fig|1040638.4.peg.1187 O104:H4 (54-125/125) str. LB226692   
                                                │     ││┌─ Escherichia coli (54-125/125) 042   
                                                │     ││├─ Escherichia coli (54-125/125) 55989   
                                                │     │└┼─ Escherichia coli (54-125/125) 55989   
                                                │    ┌┤ ├─ Escherichia coli (54-125/125) 042   
                                                │    ││ └─ fig|1040638.4.peg.2291 O104:H4 (54-125/125) str. LB226692   
                                                │    ││         ┌─ Escherichia coli (54-125/125) O103:H2 str. 12009   
                                                │    ││     ┌───┴─ Escherichia coli (54-125/125) O103:H2 str. 12009   
                                                │    ││┌────┴─────── Escherichia coli (54-124/125) MS 119-7   
                                                │    │└┤   ┌─── Escherichia coli (54-126/127) SMS-3-5   
                                                │    │ └───┤  ┌─ Escherichia coli (54-125/126) O103:H2 str. 12009   
                                                │    │     └──┤ ┌─ Escherichia coli (1-63/64) 83972   
                                                │   ┌┤        │┌┴─ Escherichia coli (1-63/64) MS 45-1   
                                                │   ││        └┤┌─ Escherichia coli (54-125/126) CFT073   
                                                │   ││         └┼─ Escherichia coli (54-125/126) CFT073   
                                                │   ││          └─ Escherichia coli (54-125/126) ABU 83972   
                                                │   ││   ┌─ Escherichia coli (54-125/125) CFT073   
                                                │   ││ ┌─┼─ Escherichia coli (54-125/125) MS 182-1   
                                                │   ││ │ └─ Escherichia coli (54-125/125) CFT073   
                                                │┌──┤└─┤ ┌─ Escherichia coli (54-124/124) 042   
                                                ││  │  │┌┴─ Escherichia coli (54-124/124) 042   
                                                ││  │  └┤┌─ Escherichia coli (54-124/124) 2362-75   
                                                ││  │   └┤┌─ Escherichia coli (54-124/124) B171   
                                                ││  │    └┼─ Escherichia coli (54-124/124) E24377A   
                                                ││  │     ├─ Escherichia coli (54-124/124) E24377A   
                                                ││  │     └─ Escherichia coli (54-124/124) B171   
                                                ││  └┬─ Escherichia coli (54-125/125) MS 182-1   
                                                └┤   └─ Escherichia coli (54-125/125) MS 21-1   
                                                 │   ┌─ Escherichia coli (54-125/125) APEC O1   
                                                 │┌──┼─ Escherichia coli (54-125/125) S88   
                                                 ││  └─ Escherichia coli (54-125/125) APEC O1   
                                                 ││     ┌─ Escherichia coli (54-125/125) 536   
                                                 ││     ├─ Escherichia coli (54-125/125) F11   
                                                 ││  ┌──┼─ Escherichia coli (54-125/125) MS 107-1   
                                                 ││  │  ├─ Escherichia coli (54-125/125) F11   
                                                 └┤ ┌┤  └─ Escherichia coli (54-125/125) 536   
                                                  │ │└───┬─ Escherichia coli (54-125/125) ETEC H10407   
                                                  │┌┤    └────┬─ Escherichia coli (54-125/125) IAI39   
                                                  │││         └─ Escherichia coli (54-125/125) IAI39   
                                                  ││└┬─ Escherichia coli (54-125/125) MS 175-1   
                                                  ││ └─ Escherichia coli (54-125/125) 101-1   
                                                  └┤┌─ Escherichia coli (54-114/114) MS 185-1   
                                                   ││          ┌─ Escherichia coli (54-125/125) ABU 83972   
                                                   ││          ├─ Escherichia coli (54-125/125) CFT073   
                                                   ││         ┌┼─ Escherichia coli (54-125/125) TA206   
                                                   └┤         │├─ Escherichia coli (54-125/125) H299   
                                                    │    ┌────┤└─ Escherichia coli (54-125/125) CFT073   
                                                    │┌───┤    └─ Escherichia coli MS 45-1   
                                                    ││   └── Escherichia coli (41-112/112) H591   
                                                    ││ ┌─ Escherichia coli (54-125/125) 536   
                                                    └┤ ├─ Escherichia coli (54-125/125) F11   
                                                     │┌┼─ Escherichia coli (54-125/125) MS 200-1   
                                                     ││├─ Escherichia coli (54-125/125) F11   
                                                     └┤└─ Escherichia coli (54-125/125) 536   
                                                      │┌─ Escherichia coli (54-125/125) MS 116-1   
                                                      ││ ┌─ Escherichia coli (54-125/125) E24377A   
                                                      └┤┌┼─ Escherichia coli (54-125/125) M718   
                                                       ││└─ Escherichia coli (54-125/125) E24377A   
                                                       └┤┌─── Escherichia coli (54-121/121) TA280   
                                                        ││  ┌─ Escherichia coli (54-125/125) E24377A   
                                                        ││ ┌┴─ Escherichia coli (54-125/125) E24377A   
                                                        └┤┌┴┬─ Escherichia coli (54-125/125) ED1a   
                                                         ││ └─ Escherichia coli (25-96/96) ED1a   
                                                         ││  ┌─ Escherichia coli (54-125/125) B171   
                                                         └┤ ┌┴─ Escherichia coli (54-125/125) B171   
                                                          │┌┴─ Escherichia coli (54-125/125) SMS-3-5   
                                                          ││  ┌─ Escherichia coli (54-125/125) H299   
                                                          ││ ┌┼─ Escherichia coli (54-125/125) IAI39   
                                                          └┤┌┤└─ Escherichia coli (54-125/125) IAI39   
                                                           ││└┬─ Escherichia coli 83972   
                                                           ││ └─ Escherichia coli (54-125/125) ABU 83972   
                                                           ││┌─ Escherichia coli (54-125/125) 536   
                                                           └┤├─ Escherichia coli (54-125/125) 55989   
                                                            │├─ Escherichia coli (54-125/125) F11   
                                                            │├─ Escherichia coli (54-125/125) MS 84-1   
                                                            │├─ Escherichia coli (54-125/125) UM146   
                                                            └┼─ Escherichia coli (54-125/125) UTI89   
                                                             ├─ Escherichia coli (54-125/125) UTI89   
                                                             ├─ Escherichia coli (25-96/96) SMS-3-5   
                                                             ├─ Escherichia coli (54-125/125) MS 124-1   
                                                             ├─ Escherichia coli (54-125/125) F11   
                                                             ├─ Escherichia coli (54-125/125) 55989   
                                                             └─ Escherichia coli (54-125/125) 536   
  
YeeV toxin protein (233)
YkfI toxin protein (22)
YpjF toxin protein (13)
transient toxin (3)
CP4-6 prophage; toxin of the YkfI-YafW toxin-antitoxin system (1)
Others (4)