fig|1040638.4.peg.2114		Escherichia coli O104:H4 str. LB226692			MNLIRRVSAIYKEQELPEYRGNPLIEALPEALTEDEVLLEMSYFPE-------IDEKIRWTAPANVREQYVERIKKFRCPQTNLIQAYKMILRALRESYAARNPLKSGTIQYLH--YYGNERPDIEP---ESGYFKSQAETITIVGMSGSGKTTMIEQVMDHFPQIIEHSSYKGVFPGFSKQIVWVKINCPYNSSVRDLCEEILQKLDDAIGIERTTPEIR----NGALARQIAQRIKSSFLGILVIDEMQRLKFSRTGGESKLIDFLHEIVDSMGVSMVFCGNHPFDETLTKKMRIARRAESGGYMKIKNVRYD----SQDWQSFIHYLWPLQWTNVETPLNDELNEKLFILSKGNIGLAQMIYRG-------------------------------------------------------------------------------------------------------------------------------------------HN
fig|6666666.5357.peg.3095		Escherichia coli TY-2482			MNLIRRVSAIYKEQELPEYRGNPLIEALPEALTEDEVLLEMSYFPE-------IDEKIRWTAPANVREQYVERIKKFRCPQTNLIQAYKMILRALRESYAARNPLKSGTIQYLH--YYGNERPDIEP---ESGYFKSQAETITIVGMSGSGKTTMIEQVMDHFPQIIEHSSYKGVFPGFSKQIVWVKINCPYNSSVRDLCEEILQKLDDAIGIERTTPEIR----NGALARQIAQRIKSSFLGILVIDEMQRLKFSRTGGESKLIDFLHEIVDSMGVSMVFCGNHPFDETLTKKMRIARRAESGGYMKIKNVRYD----SQDWQSFIHYLWPLQWTNVETPLNDELNEKLFILSKGNIGLAQMIYRG-------------------------------------------------------------------------------------------------------------------------------------------HN
fig|405955.9.peg.4421		Escherichia coli APEC O1			MNLIRRVSAIYKEQELPEYRGNPLIEALPEALTEDEVLLEMSYFPE-------IDEKIRWTAPANVREQYVERIKKFRCPQTNLIQAYKMILRALRESYAARNPLKSGTIQYLH--YYGNERPDIEP---ESGYFKSQAETITIVGMSGSGKTTMIEQVMDHFPQIIEHSSYKGVFPGFSKQIVWVKINCPYNSSVRDLCEEILQKLDDAIGIERTTPEIR----NGALARQIAQRIKSSFLGILVIDEMQRLKFSRTGGESKLIDFLHEIVDSMGVSMVFCGNHPFDETLTKKMRIARRAESGGYMKIKNVRYD----SQDWQSFIHYLWPLQWTNVETPLNDELNEKLFILSKGNIGLAQMIYRGAQLKVIGSGNEIITG------------------AVLSASVPVLVSHTEEY------------------KDTPLPGAATEDEEAKWLSASNEGDASAKIMAEKSLKSLIPGDIDRPQHKEFVGKIDEVLRNFDEKILSLDHDLVINRTAE-------------------------------KKNTYDALQRCGLI-NIDPLNKL
fig|585055.6.peg.3959		Escherichia coli 55989			MNLIRRVSAIYKEQELPEYRGNPLIEALPEALTEDEVLLEMSYFPE-------IDEKIRWTAPANVREQYVERIKKFRCPQTNLIQAYKMILRALRESYAARNPLKSGTIQYLH--YYGNERPDIEP---ESGYFKSQAETITIVGMSGSGKTTMIEQVMDHFPQIIEHSSYKGVFPGFSKQIVWVKINCPYNSSVRDLCEEILQKLDDAIGIERTTPEIR----NGALARQIAQRIKSSFLGILVIDEMQRLKFSRTGGESKLIDFLHEIVDSMGVSMVFCGNHPFDETLTKKMRIARRAESGGYMKIKNVRYD----SQDWQSFIHYLWPLQWTNVETPLNDELNEKLFILSKGNIGLAQMIYRGAQLKVIGSGNEIITG------------------AVLSASVPVLVSHTEEY------------------KDTPLPGAATEDEEAKWLSASNEGDASAKIMAEKSLKSLIPGDIDRPQHKEFVGKIDEVLRNFDEKILSLDHDLVINRTAE-------------------------------KKNTYDALQRCGLI-NIDPLNKL
fig|585055.8.peg.3961		Escherichia coli 55989			MNLIRRVSAIYKEQELPEYRGNPLIEALPEALTEDEVLLEMSYFPE-------IDEKIRWTAPANVREQYVERIKKFRCPQTNLIQAYKMILRALRESYAARNPLKSGTIQYLH--YYGNERPDIEP---ESGYFKSQAETITIVGMSGSGKTTMIEQVMDHFPQIIEHSSYKGVFPGFSKQIVWVKINCPYNSSVRDLCEEILQKLDDAIGIERTTPEIR----NGALARQIAQRIKSSFLGILVIDEMQRLKFSRTGGESKLIDFLHEIVDSMGVSMVFCGNHPFDETLTKKMRIARRAESGGYMKIKNVRYD----SQDWQSFIHYLWPLQWTNVETPLNDELNEKLFILSKGNIGLAQMIYRGAQLKVIGSGNEIITG------------------AVLSASVPVLVSHTEEY------------------KDTPLPGAATEDEEAKWLSASNEGDASAKIMAEKSLKSLIPGDIDRPQHKEFVGKIDEVLRNFDEKILSLDHDLVINRTAE-------------------------------KKNTYDALQRCGLI-NIDPLNKL
fig|405955.13.peg.5304		Escherichia coli APEC O1			MNLIRRVSAIYKEQELPEYRGNPLIEALPEALTEDEVLLEMSYFPE-------IDEKIRWTAPANVREQYVERIKKFRCPQTNLIQAYKMILRALRESYAARNPLKSGTIQYLH--YYGNERPDIEP---ESGYFKSQAETITIVGMSGSGKTTMIEQVMDHFPQIIEHSSYKGVFPGFSKQIVWVKINCPYNSSVRDLCEEILQKLDDAIGIERTTPEIR----NGALARQIAQRIKSSFLGILVIDEMQRLKFSRTGGESKLIDFLHEIVDSMGVSMVFCGNHPFDETLTKKMRIARRAESGGYMKIKNVRYD----SQDWQSFIHYLWPLQWTNVETPLNDELNEKLFILSKGNIGLAQMIYRGAQLKVIGSGNEIITG------------------AVLSASVPVLVSHTEEY------------------KDTPLPGAATEDEEAKWLSASNEGDASAKIMAEKSLKSLIPGDIDRPQHKEFVGKIDEVLRNFDEKILSLDHDLVINRTAE-------------------------------KKNTYDALQRCGLI-NIDPLNKL
fig|749548.3.peg.2045		Escherichia coli MS 196-1			MNLIRRVSAIYKEQELPEYRGNPLIEALPEALTEDEVLLEMSYFPE-------IDEKIRWTAPANVREQYVERIKKFRCPQTNLIQAYKMILRALRESYAARNPLKSGTIQYLH--YYGNERPDIEP---ESGYFKSQAETITIVGMSGSGKTTMIEQVMDHFPQIIEHSSYKGVFPGFSKQIVWVKINCPYNSSVRDLCEEILQKLDDAIGIERTTPEIR----NGALARQIAQRIKSSFLGILVIDEMQRLKFSRTGGESKLIDFLHEIVDSMGVSMVFCGNHPFDETLTKKMRIARRAESGGYMKIKNVRYD----SQDWQSFIHYLWPLQWTNVETPLNDELNEKLFILSKGNIGLAQMIYRGAQLKVIGSGNEIITG------------------AVLSASVPVLVSHTEEY------------------KDTPLPGAATEDEEAKWLSASNEGDASAKIMAEKSLKSLIPGDIDRPQHKEFVGKIDEVLRNFDEKILSLDHDLVINRTAE-------------------------------KKNTYDALQRCGLI-NIDPLNKL
fig|749537.3.peg.56		Escherichia coli MS 115-1			MTEEFQRGVIPLAR-----YQEQQLPEYQDNPLISALPPIPDLQEVVDLLQQLPGFEPQEALLDGRLRAHAIARLLHGFFQ-------PLSHHLELESKISLMIRQGYIGRNPASGAWYAHLQNGYRRVEEEDLDAAVYQS--VSSTANSLSLFGCSGCGKTRTLERILGMYPQALHHPDYD------ITQLVYLKIDCPIDGDLDELCLSFFNEVDKILGTHYSRSHGRKKLGTKRLLASMCQLANLHTLGVLIIDEVQNLNEARSGGAEKMHNFFVSLVNTIGVPIIQVGTHRASKFFQRTFRAARRVSGLG-----SIRWDRLPRDEHWKRLLKRLWKYQWLRNAAPLDDELEATMYDLTQGVMDIVIKLFALAQIRAIVTGVECIKPLLLRRVFEDEFKPVHPMLAALRSGRPELIAKYDDLLMPEIEGRLLTLTRSLDSVPQPKPPAPPADDKAKRLAALLEGME-------------IPRDIAIPMADELLAE------NPDIPLAALIHKATAYLAQDAPKRPGISRVKRTEWGCLSEEDLRRRYADGPESEAYDRFKQAGLILDLRPLLRAS
Consen1		Primary consensus			MNLIRRVSAIYKEQELPEYRGNPLIEALPEALTEDEVLLEMSYFPE-------IDEKIRWTAPANVREQYVERIKKFRCPQTNLIQAYKMILRALRESYAARNPLKSGTIQYLH--YYGNERPDIEP---ESGYFKSQAETITIVGMSGSGKTTMIEQVMDHFPQIIEHSSYKGVFPGFSKQIVWVKINCPYNSSVRDLCEEILQKLDDAIGIERTTPEIR----NGALARQIAQRIKSSFLGILVIDEMQRLKFSRTGGESKLIDFLHEIVDSMGVSMVFCGNHPFDETLTKKMRIARRAESGGYMKIKNVRYD----SQDWQSFIHYLWPLQWTNVETPLNDELNEKLFILSKGNIGLAQMIYRGaqlkvigsgneiitg------------------avlsasvpvlvshteey------------------kdtplpgaatedeeakwlsasnegdasakimaekslkslipgdidrpqhkefvgkidevlrnfdekilsldHdLVINRTAE-------------------------------KKNTYDALQRCGLI-NIDPLNKL
Consen2		Secondary consensus			n

Consensus 1 (when a gap)

Conservative difference

Consensus 2 (when a gap)

Nonconservative diff.

Other character