fig|1040638.4.peg.208   Escherichia coli O104:H4 str. LB226692     MSSSLPDDINALKRLLAEQEALNRALLEKLSAFTAHRAGYRRTGAAGPRADLKVCRAHPAVPPV
fig|6666666.5357.peg.4486   Escherichia coli TY-2482     MSSSLPDDINALKRLLAEQEALNRALLEKLSAFTAHRAGYRRTGAAGPRADLKVCRAHPAVPPV
Consen1   Primary consensus     MSSSLPDDINALKRLLAEQEALNRALLEKLSAFTAHRAGYRRTGAAGPRADLKVCRAHPAVPPV
Consen2   Secondary consensus                                                                     

Consensus 1 (when a gap)
Conservative difference
Consensus 2 (when a gap)
Nonconservative diff.
Other character