┌─ Escherichia coli (28-288/303) BL21   
                                                           ├─ fig|6666666.5357.peg.3284 TY-2482 (28-288/296) strain   
                                                           ├─ Escherichia coli (28-288/296) 042   
                                                           ├─ Escherichia coli (28-288/296) 1827-70   
                                                           ├─ Escherichia coli (28-288/296) 536   
                                                           ├─ Escherichia coli (28-288/296) 53638   
                                                           ├─ Escherichia coli (28-288/296) 55989   
                                                           ├─ Escherichia coli (28-288/296) 83972   
                                                           ├─ Escherichia coli (28-288/296) APEC O1   
                                                           ├─ Escherichia coli (28-288/296) B str. REL606   
                                                           ├─ Escherichia coli (28-288/296) B171   
                                                           ├─ Escherichia coli (28-288/296) B7A   
                                                           ├─ Escherichia coli (DE3 28-288/296) BL21(DE3)   
                                                           ├─ Escherichia coli (28-288/296) CFT073   
                                                           ├─ Escherichia coli (28-288/296) DH1   
                                                           ├─ Escherichia coli (28-288/296) E22   
                                                           ├─ Escherichia coli (28-288/296) E24377A   
                                                           ├─ Escherichia coli (28-288/296) EC4100B   
                                                           ├─ Escherichia coli (28-288/296) ED1a   
                                                           ├─ Escherichia coli (28-288/296) F11   
                                                           ├─ Escherichia coli (28-288/296) FVEC1302   
                                                           ├─ Escherichia coli (28-288/296) H736   
                                                           ├─ Escherichia coli (28-288/296) HS   
                                                           ├─ Escherichia coli (28-288/296) IAI1   
                                                           ├─ Escherichia coli (28-288/296) IAI39   
                                                           ├─ Escherichia coli (28-288/296) K12   
                                                           ├─ Escherichia coli (28-288/296) M605   
                                                           ├─ Escherichia coli (28-288/296) MS 107-1   
                                                           ├─ Escherichia coli (28-288/296) MS 119-7   
                                                           ├─ Escherichia coli (28-288/296) MS 146-1   
                                                           ├─ Escherichia coli (28-288/296) MS 182-1   
                                                           ├─ Escherichia coli (28-288/296) MS 187-1   
                                                           ├─ Escherichia coli (28-288/296) MS 198-1   
                                                           ├─ Escherichia coli (28-288/296) MS 21-1   
                                                           ├─ Escherichia coli (28-288/296) MS 69-1   
                                                           ├─ Escherichia coli (28-288/296) MS 84-1   
                                                           ├─ Escherichia coli (28-288/296) O103:H2 str. 12009   
                                                           ├─ Escherichia coli (28-288/296) O127:H6 str. E2348/69   
                                                           ├─ Escherichia coli (28-288/296) O83:H1 str. NRG 857C   
                                                           ├─ Escherichia coli (28-288/296) S88   
                                                           ├─ Escherichia coli (28-288/296) SE15   
                                                           ├─ Escherichia coli (28-288/296) TA206   
                                                           ├─ Escherichia coli (28-288/296) UM146   
                                                           ├─ Escherichia coli (28-288/296) UTI89   
                                                           ├─ Escherichia coli (28-288/296) W   
                                                           ├─ Escherichia coli (28-288/296) W3110   
                                                           ├─ Escherichia coli (28-288/296) str. K-12 substr. DH10B   
                                                          ┌┼─ Escherichia coli (28-288/296) str. K-12 substr. MG1655   
                                                          │├─ Escherichia coli (28-288/296) str. K-12 substr. MG1655   
                                                          │├─ Escherichia coli (28-288/296) str. K-12 substr. DH10B   
                                                          │├─ Escherichia coli (28-288/296) W   
                                                          │├─ Escherichia coli (28-288/296) UTI89   
                                                          │├─ Escherichia coli (28-288/296) UMN026   
                                                          │├─ Escherichia coli (28-288/296) TA271   
                                                          │├─ Escherichia coli (28-288/296) SMS-3-5   
                                                          │├─ Escherichia coli (28-288/296) SE11   
                                                          │├─ Escherichia coli (28-288/296) OP50   
                                                          │├─ Escherichia coli (28-288/296) O26:H11 str. 11368   
                                                          │├─ Escherichia coli (28-288/296) O111:H- str. 11128   
                                                          │├─ Escherichia coli (28-288/296) NC101   
                                                          │├─ Escherichia coli (28-288/296) MS 78-1   
                                                          │├─ Escherichia coli (28-288/296) MS 45-1   
                                                          │├─ Escherichia coli (28-288/296) MS 200-1   
                                                          │├─ Escherichia coli (28-288/296) MS 196-1   
                                                          │├─ Escherichia coli (28-288/296) MS 185-1   
                                                          │├─ Escherichia coli (28-288/296) MS 175-1   
                                                          │├─ Escherichia coli (28-288/296) MS 124-1   
                                                          │├─ Escherichia coli (28-288/296) MS 115-1   
                                                          │├─ Escherichia coli (28-288/296) M718   
                                                          │├─ Escherichia coli (28-288/296) KO11   
                                                          │├─ Escherichia coli (28-288/296) IHE3034   
                                                          │├─ Escherichia coli (28-288/296) IAI39   
                                                          │├─ Escherichia coli (28-288/296) IAI1   
                                                          │├─ Escherichia coli (28-288/296) HS   
                                                          │├─ Escherichia coli (28-288/296) FVEC1412   
                                                          │├─ Escherichia coli (28-288/296) F11   
                                                          │├─ Escherichia coli (28-288/296) ETEC H10407   
                                                         ┌┤├─ Escherichia coli (28-288/296) ED1a   
                                                         ││├─ Escherichia coli (28-288/296) E24377A   
                                                         ││├─ Escherichia coli (28-288/296) E2348/69   
                                                         ││├─ Escherichia coli (28-288/296) E22   
                                                         ││├─ Escherichia coli (28-288/296) CFT073   
                                                         ││├─ Escherichia coli (28-288/296) BW2952   
                                                         ││├─ Escherichia coli (28-288/296) B7A   
                                                         ││├─ Escherichia coli (28-288/296) B185   
                                                         ││├─ Escherichia coli (28-288/296) B171   
                                                         ││├─ Escherichia coli (28-288/296) APEC O1   
                                                         ││├─ Escherichia coli (28-288/296) ABU 83972   
                                                         ││├─ Escherichia coli (28-288/296) 55989   
                                                         ││├─ Escherichia coli (28-288/296) 53638   
                                                         ││├─ Escherichia coli (28-288/296) 536   
                                                         ││├─ Escherichia coli (28-288/296) 2362-75   
                                                         ││├─ Escherichia coli (28-288/296) 101-1   
                                                         ││├─ Escherichia coli (28-288/296) 042   
                                                         ││└─ fig|1040638.4.peg.4054 O104:H4 (28-288/296) str. LB226692   
                                                         ││┌─ Escherichia coli (28-288/296) 1125A   
                                                         ││├─ Escherichia coli (28-288/296) 536A   
                                                         ││├─ Escherichia coli (28-288/296) O157:H7 EDL933   
                                                         ││├─ Escherichia coli (28-288/296) O157:H7 str. EC4024   
                                                        ┌┤│├─ Escherichia coli (28-288/296) O157:H7 str. EC4045   
                                                        │││├─ Escherichia coli (28-288/296) O157:H7 str. EC4113   
                                                        │││├─ Escherichia coli (28-288/296) O157:H7 str. EC4196   
                                                        │││├─ Escherichia coli (28-288/296) O157:H7 str. EC4401   
                                                        │││├─ Escherichia coli (28-288/296) O157:H7 str. EC4501   
                                                        │││├─ Escherichia coli (28-288/296) O157:H7 str. EC869   
                                                        │││├─ Escherichia coli (28-288/296) O157:H7 str. FRIK966   
                                                        │││├─ Escherichia coli (28-288/296) O157:H7 str. TW14359   
                                                        ││└┼─ Escherichia coli (28-288/296) O55:H7 str. CB9615   
                                                        ││ ├─ Escherichia coli (28-288/296) O157:H7 str. TW14588   
                                                        ││ ├─ Escherichia coli (28-288/296) O157:H7 str. Sakai   
                                                        ││ ├─ Escherichia coli (28-288/296) O157:H7 str. FRIK2000   
                                                        ││ ├─ Escherichia coli (28-288/296) O157:H7 str. EC508   
                                                       ┌┤│ ├─ Escherichia coli (28-288/296) O157:H7 str. EC4486   
                                                       │││ ├─ Escherichia coli (28-288/296) O157:H7 str. EC4206   
                                                       │││ ├─ Escherichia coli (28-288/296) O157:H7 str. EC4115   
                                                       │││ ├─ Escherichia coli (28-288/296) O157:H7 str. EC4076   
                                                       │││ ├─ Escherichia coli (28-288/296) O157:H7 str. EC4042   
                                                       │││ ├─ Escherichia coli (28-288/296) O157:H7 EDL933   
                                                       │││ ├─ Escherichia coli (28-288/296) O157:H7   
                                                       │││ ├─ Escherichia coli (28-288/296) 1212A   
                                                      ┌┤││ └─ Escherichia coli (28-288/296) 1044A   
                                                      │││└┬─ Escherichia coli (28-288/296) WV_060327   
                                                      │││ └┬─ Escherichia coli (28-288/296) E110019   
                                                      │││  └─ Escherichia coli (28-288/296) E110019   
                                                      │││┌─ Escherichia coli (28-288/296) ATCC 8739   
                                                      ││└┼─ Escherichia coli (28-288/296) MS 145-7   
                                                     ┌┤│ └─ Escherichia coli (28-288/296) ATCC 8739   
                                                     │││┌─ Escherichia coli (28-288/296) MS 116-1   
                                                     ││└┤┌─ Escherichia coli (28-288/296) H299   
       ┌─────────────────────────────────────────────┤│ └┼─ Escherichia coli (28-288/296) TA280   
       │                                             ││  └─ Escherichia coli (28-288/296) B354   
┌──────┤                                             │└─ Escherichia coli (8-259/267) H591   
│      │                                             └─ Escherichia coli (39-288/296) B088   
│      └───────────── Escherichia coli (34-298/300) TA143   
│                                      ┌─ Escherichia coli (38-291/298) EC4100B   
│                                      ├─ Escherichia coli (38-291/298) DH1   
│                                      ├─ Escherichia coli (38-291/298) MS 116-1   
│                                      ├─ Escherichia coli (38-291/298) MS 175-1   
│                                      ├─ Escherichia coli (38-291/298) W3110   
│                                      ├─ Escherichia coli (38-291/298) str. K-12 substr. DH10B   
│                                      ├─ Escherichia coli (38-291/298) str. K-12 substr. MG1655   
│                                      ├─ Escherichia coli (38-291/298) 1044A   
│                                      ├─ Escherichia coli (38-291/298) 536A   
│                                      ├─ Escherichia coli (38-291/298) B088   
│                                      ├─ Escherichia coli (38-291/298) B7A   
│                                      ├─ Escherichia coli (38-291/298) BL21   
│                                      ├─ Escherichia coli (38-291/298) E24377A   
│                                      ├─ Escherichia coli (38-291/298) H591   
│                                      ├─ Escherichia coli (38-291/298) M718   
│                                      ├─ Escherichia coli (38-291/298) MS 119-7   
│                                      ├─ Escherichia coli (38-291/298) MS 182-1   
│                                      ├─ Escherichia coli (38-291/298) MS 78-1   
│                                      ├─ Escherichia coli (38-291/298) O157:H7   
│                                      ├─ Escherichia coli (38-291/298) O157:H7 str. EC869   
│                                      ├─ Escherichia coli (38-291/298) O157:H7 str. FRIK966   
│                                      ├─ Escherichia coli (38-291/298) O157:H7 str. TW14588   
│                                      ├─ Escherichia coli (38-291/298) SE11   
│                                      ├─ Escherichia coli (38-291/298) W   
│                                     ┌┼─ Escherichia coli (38-291/298) W   
│                                     │├─ Escherichia coli (38-291/298) TA271   
│                                     │├─ Escherichia coli (38-291/298) O55:H7 str. CB9615   
│                                     │├─ Escherichia coli (38-291/298) O157:H7 str. Sakai   
│                                     │├─ Escherichia coli (38-291/298) O157:H7 str. FRIK2000   
│                                     │├─ Escherichia coli (38-291/298) O157:H7 str. EC4501   
│                                     │├─ Escherichia coli (38-291/298) MS 84-1   
│                                     │├─ Escherichia coli (38-291/298) MS 187-1   
│                                     │├─ Escherichia coli (38-291/298) MS 124-1   
│                                     │├─ Escherichia coli (38-291/298) MS 107-1   
│                                     │├─ Escherichia coli (38-291/298) KO11   
│                                     │├─ Escherichia coli (38-291/298) E24377A   
│                                     │├─ Escherichia coli (DE3 38-291/298) BL21(DE3)   
│                                    ┌┤├─ Escherichia coli (38-291/298) B7A   
│                                    ││├─ Escherichia coli (38-291/298) B185   
│                                    ││├─ Escherichia coli (38-291/298) B str. REL606   
│                                    ││├─ Escherichia coli (38-291/298) 1212A   
│                                    ││├─ Escherichia coli (38-291/298) 101-1   
│                                    ││├─ Escherichia coli (38-291/298) str. K-12 substr. MG1655   
│                                    ││├─ Escherichia coli (38-291/298) str. K-12 substr. DH10B   
│                                    ││├─ Escherichia coli (38-291/298) MS 196-1   
│                                    ││├─ Escherichia coli (38-291/298) MS 146-1   
│                                    ││├─ Escherichia coli (38-291/298) K12   
│                                    ││└─ Escherichia coli (38-291/298) BW2952   
│                                    ││┌─ Escherichia coli (38-291/298) ETEC H10407   
│                                    │││ ┌─ Escherichia coli (38-291/298) O157:H7 EDL933   
│                                    │└┤┌┴─ Escherichia coli (38-291/298) O157:H7 EDL933   
│                                    │ ││┌─ Escherichia coli (38-291/298) O157:H7 str. EC4024   
│                                   ┌┤ ││├─ Escherichia coli (38-291/298) O157:H7 str. EC4045   
│                                   ││ └┤├─ Escherichia coli (38-291/298) O157:H7 str. EC4113   
│                                   ││  │├─ Escherichia coli (38-291/298) O157:H7 str. EC4196   
│                                   ││  │├─ Escherichia coli (38-291/298) O157:H7 str. EC4401   
│                                   ││  │├─ Escherichia coli (38-291/298) O157:H7 str. EC508   
│                                   ││  └┼─ Escherichia coli (38-291/298) O157:H7 str. TW14359   
│                                   ││   ├─ Escherichia coli (38-291/298) O157:H7 str. EC4486   
│                                   ││   ├─ Escherichia coli (38-291/298) O157:H7 str. EC4206   
│                                   ││   ├─ Escherichia coli (38-291/298) O157:H7 str. EC4115   
│                                   ││   ├─ Escherichia coli (38-291/298) O157:H7 str. EC4076   
│                                   ││   ├─ Escherichia coli (38-291/298) O157:H7 str. EC4042   
│                                   ││   └─ Escherichia coli (38-291/298) 1125A   
│                                   ││┌─ Escherichia coli (38-291/298) MS 115-1   
│                                   │││┌─ Escherichia coli (38-291/298) O26:H11 str. 11368   
│                                   │└┤│  ┌─ Escherichia coli (38-291/298) HS   
│                                   │ ││ ┌┴─ Escherichia coli (38-291/298) HS   
│                                   │ ││┌┴─ Escherichia coli (38-291/298) O111:H- str. 11128   
│                                   │ └┤│┌─ fig|6666666.5357.peg.2696 TY-2482 (38-291/298) strain   
│                                  ┌┤  ││├─ Escherichia coli (38-291/298) 53638   
│                                  ││  ││├─ Escherichia coli (38-291/298) 55989   
│                                  ││  ││├─ Escherichia coli (38-291/298) ATCC 8739   
│                                  ││  └┤├─ Escherichia coli (38-291/298) B171   
│                                  ││   │├─ Escherichia coli (38-291/298) E110019   
│                                  ││   │├─ Escherichia coli (38-291/298) E22   
│                                  ││   │├─ Escherichia coli (38-291/298) IAI1   
│                                  ││   │├─ Escherichia coli (38-291/298) MS 145-7   
│                                  ││   └┼─ Escherichia coli (38-291/298) O103:H2 str. 12009   
│                                  ││    ├─ Escherichia coli (38-291/298) IAI1   
│                                  ││    ├─ Escherichia coli (38-291/298) E22   
│       ┌──────────────────────────┤│    ├─ Escherichia coli (38-291/298) E110019   
│       │                          ││    ├─ Escherichia coli (38-291/298) B171   
│       │                          ││    ├─ Escherichia coli (38-291/298) ATCC 8739   
│       │                          ││    ├─ Escherichia coli (38-291/298) 55989   
│       │                          ││    ├─ Escherichia coli (38-291/298) 53638   
│       │                          ││    ├─ Escherichia coli (38-291/298) 1827-70   
│       │                          ││    └─ fig|1040638.4.peg.4232 O104:H4 (38-291/298) str. LB226692   
│       │                          │└─ Escherichia coli (38-291/298) B354   
│       │                          │┌─ Escherichia coli (38-291/298) MS 21-1   
│       │                          ││┌─ Escherichia coli (38-291/298) FVEC1302   
│       │                          ││├─ Escherichia coli (38-291/298) IAI39   
┤       │                          └┤├─ Escherichia coli (38-291/298) MS 69-1   
│       │                           │├─ Escherichia coli (38-291/298) TA143   
│       │                           │├─ Escherichia coli (38-291/298) UMN026   
│       │                           └┼─ Escherichia coli (29-282/289) FVEC1412   
│       │                            ├─ Escherichia coli (29-282/289) 042   
│       │                            ├─ Escherichia coli (38-291/298) TA280   
│       │                            ├─ Escherichia coli (38-291/298) SMS-3-5   
│       │                            ├─ Escherichia coli (38-291/298) MS 198-1   
│       │                            ├─ Escherichia coli (38-291/298) IAI39   
│       │                            └─ Escherichia coli (38-291/298) 042   
│       │                                         ┌─ Escherichia coli (43-301/303) SMS-3-5   
│       │                                         ├─ Escherichia coli (43-301/303) 536   
│       │                                         ├─ Escherichia coli (43-301/303) ABU 83972   
│       │                                         ├─ Escherichia coli (43-301/303) CFT073   
│       │                                         ├─ Escherichia coli (43-301/303) F11   
│       │                                         ├─ Escherichia coli (43-301/303) MS 200-1   
│       │                                         ├─ Escherichia coli (43-301/303) TA206   
│       │                                         ├─ fig|6666666.5357.peg.3775 TY-2482 (43-301/303) strain   
│       │                                         ├─ Escherichia coli (43-301/303) 1125A   
│       │                                         ├─ Escherichia coli (43-301/303) 2362-75   
│       │                                         ├─ Escherichia coli (43-301/303) 55989   
│       │                                         ├─ Escherichia coli (43-301/303) B088   
│       │                                         ├─ Escherichia coli (43-301/303) B171   
│       │                                         ├─ Escherichia coli (43-301/303) B354   
│       │                                         ├─ Escherichia coli (43-301/303) B7A   
│       │                                         ├─ Escherichia coli (43-301/303) E22   
│       │                                         ├─ Escherichia coli (43-301/303) E24377A   
│       │                                         ├─ Escherichia coli (43-301/303) EC4100B   
│       │                                         ├─ Escherichia coli (43-301/303) ED1a   
│       │                                         ├─ Escherichia coli (43-301/303) H591   
│       │                                         ├─ Escherichia coli (43-301/303) IAI1   
│       │                                         ├─ Escherichia coli (43-301/303) IAI39   
│       │                                         ├─ Escherichia coli (43-301/303) MS 107-1   
│       │                                         ├─ Escherichia coli (43-301/303) MS 119-7   
│       │                                         ├─ Escherichia coli (43-301/303) MS 145-7   
│       │                                         ├─ Escherichia coli (43-301/303) MS 78-1   
│       │                                         ├─ Escherichia coli (43-301/303) NC101   
│       │                                         ├─ Escherichia coli (43-301/303) O127:H6 str. E2348/69   
│       │                                         ├─ Escherichia coli (43-301/303) O157:H7 EDL933   
│       │                                         ├─ Escherichia coli (43-301/303) O157:H7 str. EC4024   
│       │                                         ├─ Escherichia coli (43-301/303) O157:H7 str. EC4045   
│       │                                         ├─ Escherichia coli (43-301/303) O157:H7 str. EC4113   
│       │                                         ├─ Escherichia coli (43-301/303) O157:H7 str. EC4196   
│       │                                         ├─ Escherichia coli (43-301/303) O157:H7 str. EC4401   
│       │                                         ├─ Escherichia coli (43-301/303) O157:H7 str. EC508   
│       │                                         ├─ Escherichia coli (43-301/303) O157:H7 str. FRIK2000   
│       │                                         ├─ Escherichia coli (43-301/303) O157:H7 str. Sakai   
│       │                                         ├─ Escherichia coli (43-301/303) O157:H7 str. TW14588   
│       │                                         ├─ Escherichia coli (43-301/303) SE11   
│       │                                         ├─ Escherichia coli (43-301/303) TA271   
│       │                                         ├─ Escherichia coli (43-301/303) O83:H1 str. NRG 857C   
│       │                                        ┌┼─ Escherichia coli (43-301/303) M605   
│       │                                        │├─ Escherichia coli (43-301/303) WV_060327   
│       │                                        │├─ Escherichia coli (43-301/303) O55:H7 str. CB9615   
│       │                                        │├─ Escherichia coli (43-301/303) SE15   
│       │                                        │├─ Escherichia coli (43-301/303) O26:H11 str. 11368   
│       │                                        │├─ Escherichia coli (43-301/303) O157:H7 str. TW14359   
│       │                                        │├─ Escherichia coli (43-301/303) O157:H7 str. FRIK966   
│       │                                        │├─ Escherichia coli (43-301/303) O157:H7 str. EC869   
│       │                                        │├─ Escherichia coli (43-301/303) O157:H7 str. EC4501   
│       │                                        │├─ Escherichia coli (43-301/303) O157:H7 str. EC4206   
│       │                                        │├─ Escherichia coli (43-301/303) O157:H7 str. EC4115   
│       │                                        │├─ Escherichia coli (43-301/303) O157:H7 str. EC4076   
│       │                                        │├─ Escherichia coli (43-301/303) O157:H7 str. EC4042   
│       │                                        │├─ Escherichia coli (43-301/303) O157:H7 EDL933   
│       │                                        │├─ Escherichia coli (43-301/303) O157:H7   
│       │                                        │├─ Escherichia coli (43-301/303) O103:H2 str. 12009   
│       │                                        │├─ Escherichia coli (43-301/303) MS 84-1   
│       │                                        │├─ Escherichia coli (43-301/303) MS 21-1   
│       │                                        │├─ Escherichia coli (43-301/303) MS 124-1   
│       │                                        │├─ Escherichia coli (43-301/303) MS 115-1   
│       │                                        │├─ Escherichia coli (43-301/303) M718   
│       │                                        │├─ Escherichia coli (43-301/303) IAI39   
│       │                                        │├─ Escherichia coli (43-301/303) IAI1   
│       │                                       ┌┤├─ Escherichia coli (43-301/303) H299   
│       │                                       ││├─ Escherichia coli (43-301/303) ED1a   
│       │                                       ││├─ Escherichia coli (43-301/303) E24377A   
│       │                                       ││├─ Escherichia coli (43-301/303) E2348/69   
│       │                                       ││├─ Escherichia coli (43-301/303) E22   
│       │                                       ││├─ Escherichia coli (43-301/303) B7A   
│       │                                       ││├─ Escherichia coli (43-301/303) B185   
│       │                                       ││├─ Escherichia coli (43-301/303) B171   
│       │                                       ││├─ Escherichia coli (43-301/303) 55989   
│       │                                       ││├─ Escherichia coli (43-301/303) 536A   
│       │                                       ││├─ Escherichia coli (43-301/303) 1212A   
│       │                                       ││├─ Escherichia coli (43-301/303) 1044A   
│       │                                       ││├─ fig|1040638.4.peg.4676 O104:H4 (43-301/303) str. LB226692   
│       │                                       ││├─ Escherichia coli (43-301/303) MS 45-1   
│       │                                       ││├─ Escherichia coli (43-301/303) MS 185-1   
│       │                                       ││├─ Escherichia coli (43-301/303) F11   
│       │                                       ││├─ Escherichia coli (43-301/303) CFT073   
│       │                                       ││├─ Escherichia coli (43-301/303) 83972   
│       │                                       ││└─ Escherichia coli (43-301/303) 536   
│       │                                      ┌┤│ ┌─ Escherichia coli (43-301/303) KO11   
│       │                                      │││┌┼─ Escherichia coli (43-301/303) W   
│       │                                      ││││└─ Escherichia coli (43-301/303) W   
└───────┤                                      ││└┤┌─ Escherichia coli (43-301/303) APEC O1   
        │                                      ││ │├─ Escherichia coli (43-301/303) S88   
        │                                      ││ │├─ Escherichia coli (43-301/303) UTI89   
        │                                      ││ └┼─ Escherichia coli (43-301/303) UTI89   
        │                                      ││  ├─ Escherichia coli (43-301/303) UM146   
        │                                      ││  ├─ Escherichia coli (43-301/303) IHE3034   
        │                                      ││  └─ Escherichia coli (43-301/303) APEC O1   
        │                                      ││┌─ Escherichia coli (43-301/303) B str. REL606   
        │                                      ││├─ Escherichia coli (DE3 43-301/303) BL21(DE3)   
        │                                      ││├─ Escherichia coli (43-301/303) DH1   
        │                                      ││├─ Escherichia coli (43-301/303) H736   
        │                                      ││├─ Escherichia coli (43-301/303) MS 116-1   
        │                                     ┌┤│├─ Escherichia coli (43-301/303) MS 175-1   
        │                                     │││├─ Escherichia coli (43-301/303) MS 196-1   
        │                                     │││├─ Escherichia coli (43-301/303) str. K-12 substr. DH10B   
        │                                     │││├─ Escherichia coli (43-301/303) str. K-12 substr. MG1655   
        │                                     ││└┼─ Escherichia coli (43-301/303) str. K-12 substr. MG1655   
        │                                     ││ ├─ Escherichia coli (43-301/303) str. K-12 substr. DH10B   
        │                                     ││ ├─ Escherichia coli (43-301/303) W3110   
        │                                     ││ ├─ Escherichia coli (43-301/303) MS 187-1   
        │                                    ┌┤│ ├─ Escherichia coli (43-301/303) MS 146-1   
        │                                    │││ ├─ Escherichia coli (43-301/303) K12   
        │                                    │││ ├─ Escherichia coli (43-301/303) ETEC H10407   
        │                                    │││ ├─ Escherichia coli (43-301/303) BW2952   
        │                                    │││ ├─ Escherichia coli (43-301/303) BL21   
        │                                   ┌┤││ └─ Escherichia coli (43-301/303) 101-1   
        │                                   │││└┬─ Escherichia coli (43-301/303) E110019   
        │                                   │││ └─ Escherichia coli (43-301/303) E110019   
        │                                  ┌┤│└─ Escherichia coli (43-301/303) MS 182-1   
        │                                  ││└─ Escherichia coli (43-301/303) TA280   
        │                                  │└─ Escherichia coli (43-301/303) O111:H- str. 11128   
        │                                  │┌─ Escherichia coli (43-301/303) 042   
        │                                  │├─ Escherichia coli (43-301/303) 1827-70   
        │                                 ┌┤├─ Escherichia coli (43-301/303) 53638   
        │                                 ││├─ Escherichia coli (43-301/303) ATCC 8739   
        │                                 ││├─ Escherichia coli (43-301/303) FVEC1412   
        │                                 ││├─ Escherichia coli (43-301/303) TA143   
        │                                 │└┼─ Escherichia coli (43-301/303) UMN026   
        │                                 │ ├─ Escherichia coli (43-301/303) MS 198-1   
        │         ┌───────────────────────┤ ├─ Escherichia coli (43-301/303) FVEC1302   
        │         │                       │ ├─ Escherichia coli (43-301/303) ATCC 8739   
        │         │                       │ ├─ Escherichia coli (43-301/303) 53638   
        │         │                       │ ├─ Escherichia coli (43-301/303) 042   
        │         │                       │ └─ Escherichia coli (43-301/303) MS 69-1   
        │         │                       └┬─ Escherichia coli (43-301/303) HS   
        │         │                        └─ Escherichia coli (43-301/303) HS   
        │         │                                                     ┌─ Escherichia coli (32-298/301) MS 198-1   
        │         │                                                     ├─ fig|6666666.5357.peg.3382 TY-2482 (33-299/302) strain   
        │         │                                                     ├─ Escherichia coli (33-299/302) 1044A   
        │         │                                                     ├─ Escherichia coli (33-299/302) 1212A   
        │         │                                                     ├─ Escherichia coli (33-299/302) 53638   
        │         │                                                     ├─ Escherichia coli (33-299/302) 536A   
        │         │                                                     ├─ Escherichia coli (33-299/302) 55989   
        │         │                                                     ├─ Escherichia coli (33-299/302) ATCC 8739   
        │         │                                                     ├─ Escherichia coli (33-299/302) B088   
        │         │                                                     ├─ Escherichia coli (33-299/302) B171   
        │         │                                                     ├─ Escherichia coli (33-299/302) B7A   
        │         │                                                     ├─ Escherichia coli (33-299/302) BL21   
        │         │                                                     ├─ Escherichia coli (33-299/302) BW2952   
        │         │                                                     ├─ Escherichia coli (33-299/302) E22   
        │         │                                                     ├─ Escherichia coli (33-299/302) E24377A   
        │         │                                                     ├─ Escherichia coli (33-299/302) EC4100B   
        │         │                                                     ├─ Escherichia coli (33-299/302) FVEC1302   
        │         │                                                     ├─ Escherichia coli (33-299/302) H299   
        │         │                                                     ├─ Escherichia coli (33-299/302) HS   
        │         │                                                     ├─ Escherichia coli (33-299/302) IAI1   
        │         │                                                     ├─ Escherichia coli (33-299/302) K12   
        │         │                                                     ├─ Escherichia coli (33-299/302) MS 107-1   
        │         │                                                     ├─ Escherichia coli (33-299/302) MS 116-1   
        │         │                                                     ├─ Escherichia coli (33-299/302) MS 124-1   
        │         │                                                     ├─ Escherichia coli (33-299/302) MS 175-1   
        │         │                                                     ├─ Escherichia coli (33-299/302) MS 187-1   
        │         │                                                     ├─ Escherichia coli (33-299/302) MS 69-1   
        │         │                                                     ├─ Escherichia coli (33-299/302) MS 84-1   
        │         │                                                     ├─ Escherichia coli (33-299/302) O111:H- str. 11128   
        │         │                                                     ├─ Escherichia coli (33-299/302) O157:H7 EDL933   
        │         │                                                     ├─ Escherichia coli (33-299/302) O157:H7 str. EC4024   
        │         │                                                     ├─ Escherichia coli (33-299/302) O157:H7 str. EC4045   
        │         │                                                     ├─ Escherichia coli (33-299/302) O157:H7 str. EC4113   
        │         │                                                     ├─ Escherichia coli (33-299/302) O157:H7 str. EC4196   
        │         │                                                     ├─ Escherichia coli (33-299/302) O157:H7 str. EC4401   
        │         │                                                     ├─ Escherichia coli (33-299/302) O157:H7 str. EC4501   
        │         │                                                     ├─ Escherichia coli (33-299/302) O157:H7 str. EC869   
        │         │                                                     ├─ Escherichia coli (33-299/302) O157:H7 str. FRIK966   
        │         │                                                     ├─ Escherichia coli (33-299/302) O157:H7 str. TW14359   
        │         │                                                     ├─ Escherichia coli (33-299/302) O26:H11 str. 11368   
        │         │                                                     ├─ Escherichia coli (33-299/302) OP50   
        │         │                                                     ├─ Escherichia coli (33-299/302) TA271   
        │         │                                                     ├─ Escherichia coli (33-299/302) UMN026   
        │         │                                                     ├─ Escherichia coli (33-299/302) W   
        │         │                                                     ├─ Escherichia coli (33-299/302) str. K-12 substr. DH10B   
        │         │                                                     ├─ Escherichia coli (33-299/302) str. K-12 substr. MG1655   
        │         │                                                    ┌┼─ Escherichia coli (33-299/302) str. K-12 substr. MG1655   
        │         │                                                    │├─ Escherichia coli (33-299/302) str. K-12 substr. DH10B   
        │         │                                                    │├─ Escherichia coli (33-299/302) W3110   
        │         │                                                    │├─ Escherichia coli (33-299/302) W   
        │         │                                                    │├─ Escherichia coli (33-299/302) TA280   
        │         │                                                    │├─ Escherichia coli (33-299/302) SE11   
        │         │                                                    │├─ Escherichia coli (33-299/302) O55:H7 str. CB9615   
        │         │                                                    │├─ Escherichia coli (33-299/302) O157:H7 str. TW14588   
        │         │                                                    │├─ Escherichia coli (33-299/302) O157:H7 str. Sakai   
        │         │                                                    │├─ Escherichia coli (33-299/302) O157:H7 str. FRIK2000   
        │         │                                                    │├─ Escherichia coli (33-299/302) O157:H7 str. EC508   
        │         │                                                    │├─ Escherichia coli (33-299/302) O157:H7 str. EC4486   
        │         │                                                    │├─ Escherichia coli (33-299/302) O157:H7 str. EC4206   
        │         │                                                    │├─ Escherichia coli (33-299/302) O157:H7 str. EC4115   
        │         │                                                    │├─ Escherichia coli (33-299/302) O157:H7 str. EC4076   
        │         │                                                    │├─ Escherichia coli (33-299/302) O157:H7 str. EC4042   
        └─────────┤                                                    │├─ Escherichia coli (33-299/302) O157:H7 EDL933   
                  │                                                    │├─ Escherichia coli (33-299/302) O157:H7   
                  │                                                    │├─ Escherichia coli (33-299/302) O103:H2 str. 12009   
                  │                                                    │├─ Escherichia coli (33-299/302) MS 78-1   
                  │                                                    │├─ Escherichia coli (33-299/302) MS 196-1   
                  │                                                    │├─ Escherichia coli (33-299/302) MS 182-1   
                  │                                                    │├─ Escherichia coli (33-299/302) MS 145-7   
                  │                                                   ┌┤├─ Escherichia coli (33-299/302) MS 119-7   
                  │                                                   ││├─ Escherichia coli (33-299/302) MS 115-1   
                  │                                                   ││├─ Escherichia coli (33-299/302) KO11   
                  │                                                   ││├─ Escherichia coli (33-299/302) IAI1   
                  │                                                   ││├─ Escherichia coli (33-299/302) HS   
                  │                                                   ││├─ Escherichia coli (33-299/302) H591   
                  │                                                   ││├─ Escherichia coli (33-299/302) FVEC1412   
                  │                                                   ││├─ Escherichia coli (33-299/302) ETEC H10407   
                  │                                                   ││├─ Escherichia coli (33-299/302) E24377A   
                  │                                                   ││├─ Escherichia coli (33-299/302) E22   
                  │                                                   ││├─ Escherichia coli (33-299/302) DH1   
                  │                                                   ││├─ Escherichia coli (DE3 33-299/302) BL21(DE3)   
                  │                                                   ││├─ Escherichia coli (33-299/302) B7A   
                  │                                                   ││├─ Escherichia coli (33-299/302) B354   
                  │                                                  ┌┤│├─ Escherichia coli (33-299/302) B171   
                  │                                                  │││├─ Escherichia coli (33-299/302) B str. REL606   
                  │                                                  │││├─ Escherichia coli (33-299/302) ATCC 8739   
                  │                                                  │││├─ Escherichia coli (33-299/302) 55989   
                  │                                                  │││├─ Escherichia coli (33-299/302) 53638   
                  │                                                  │││├─ Escherichia coli (33-299/302) 1827-70   
                  │                                                  │││├─ Escherichia coli (33-299/302) 1125A   
                  │                                                  │││├─ Escherichia coli (33-299/302) 101-1   
                  │                                                  │││└─ fig|1040638.4.peg.4565 O104:H4 (33-299/302) str. LB226692   
                  │                                                  ││└┬─ Escherichia coli (33-299/302) E110019   
                  │                                                  ││ └─ Escherichia coli (33-299/302) E110019   
                  │                                                  ││┌─ Escherichia coli (33-299/302) 536   
                  │                                                  ││├─ Escherichia coli (33-299/302) F11   
                  │                                                  │└┼─ Escherichia coli (33-299/302) TA206   
                  │                                                  │ ├─ Escherichia coli (33-299/302) MS 200-1   
                  │                                                  │ ├─ Escherichia coli (33-299/302) F11   
                  │                                                  │ └─ Escherichia coli (33-299/302) 536   
                  │                                                 ┌┤┌─ Escherichia coli (33-299/302) 042   
                  │                                                 ││├─ Escherichia coli (33-299/302) 83972   
                  │                                                 ││├─ Escherichia coli (33-299/302) APEC O1   
                  │                                                 ││├─ Escherichia coli (33-299/302) B185   
                  │                                                 ││├─ Escherichia coli (33-299/302) CFT073   
                  │                                                 ││├─ Escherichia coli (33-299/302) ED1a   
                  │                                                 ││├─ Escherichia coli (33-299/302) H736   
                  │                                                 ││├─ Escherichia coli (33-299/302) IAI39   
                  │                                                 ││├─ Escherichia coli (33-299/302) M605   
                  │                                                 ││├─ Escherichia coli (33-299/302) MS 146-1   
                  │                                                 ││├─ Escherichia coli (33-299/302) MS 21-1   
                  │                                                 ││├─ Escherichia coli (33-299/302) NC101   
                  │                                                 ││├─ Escherichia coli (33-299/302) S88   
                  │                                                 ││├─ Escherichia coli (33-299/302) SMS-3-5   
                  │                                                 ││├─ Escherichia coli (33-299/302) UM146   
                  │                                                 ││├─ Escherichia coli (33-299/302) UTI89   
                  │                                                 │└┼─ Escherichia coli (33-299/302) WV_060327   
                  │ ┌───────────────────────────────────────────────┤ ├─ Escherichia coli (33-299/302) UTI89   
                  │ │                                               │ ├─ Escherichia coli (33-299/302) TA143   
                  │ │                                               │ ├─ Escherichia coli (33-299/302) SE15   
                  │ │                                               │ ├─ Escherichia coli (33-299/302) O83:H1 str. NRG 857C   
                  │ │                                               │ ├─ Escherichia coli (33-299/302) MS 45-1   
                  │ │                                               │ ├─ Escherichia coli (33-299/302) MS 185-1   
                  │ │                                               │ ├─ Escherichia coli (33-299/302) M718   
                  │ │                                               │ ├─ Escherichia coli (33-299/302) IHE3034   
                  │ │                                               │ ├─ Escherichia coli (33-299/302) IAI39   
                  │ │                                               │ ├─ Escherichia coli (33-299/302) ED1a   
                  │ │                                               │ ├─ Escherichia coli (33-299/302) E2348/69   
                  │ │                                               │ ├─ Escherichia coli (33-299/302) CFT073   
                  │ │                                               │ ├─ Escherichia coli (33-299/302) APEC O1   
                  │ │                                               │ ├─ Escherichia coli (33-299/302) ABU 83972   
                  └─┤                                               │ ├─ Escherichia coli (33-299/302) 2362-75   
                    │                                               │ └─ Escherichia coli (33-299/302) 042   
                    │                                               └─ Escherichia coli (11-266/269) O127:H6 str. E2348/69   
                    │                                          ┌─ Escherichia coli 83972   
                    │                                          ├─ Escherichia coli CFT073   
                    │                                          ├─ Escherichia coli MS 185-1   
                    │                                         ┌┼─ Escherichia coli MS 45-1   
                    │                                         │├─ Escherichia coli CFT073   
                    │                                         │└─ Escherichia coli ABU 83972   
                    │                                         │ ┌─ Escherichia coli 2362-75   
                    │                                         │ ├─ Escherichia coli APEC O1   
                    │                                         │ ├─ Escherichia coli IHE3034   
                    │                                         │ ├─ Escherichia coli O127:H6 str. E2348/69   
                    │                                         │ ├─ Escherichia coli S88   
                    │                                         │ ├─ Escherichia coli UM146   
                    └─────────────────────────────────────────┤ ├─ Escherichia coli UTI89   
                                                              │┌┼─ Escherichia coli WV_060327   
                                                              ││├─ Escherichia coli UTI89   
                                                              ││├─ Escherichia coli TA206   
                                                              ││├─ Escherichia coli O83:H1 str. NRG 857C   
                                                              ││├─ Escherichia coli NC101   
                                                              ││├─ Escherichia coli E2348/69   
                                                              ││└─ Escherichia coli APEC O1   
                                                              ││ ┌─ Escherichia coli 536   
                                                              └┤ ├─ Escherichia coli F11   
                                                               │┌┼─ Escherichia coli MS 200-1   
                                                               ││├─ Escherichia coli F11   
                                                               ││└─ Escherichia coli 536   
                                                               ││ ┌─ Escherichia coli B354   
                                                               ││ ├─ Escherichia coli ED1a   
                                                               ││┌┼─ Escherichia coli SE15   
                                                               │││├─ Escherichia coli M605   
                                                               └┤│└─ Escherichia coli ED1a   
                                                                ││ ┌─ Escherichia coli O26:H11 str. 11368   
                                                                ││┌┴─ Escherichia coli O111:H- str. 11128   
                                                                │││    ┌─ Escherichia coli B185   
                                                                │││   ┌┴─ Escherichia coli MS 182-1   
                                                                │││  ┌┴─ Escherichia coli M718   
                                                                │││ ┌┴┬─ Escherichia coli HS   
                                                                └┤│┌┤ └─ Escherichia coli HS   
                                                                 │││└─ Escherichia coli MS 21-1   
                                                                 │││┌─ fig|6666666.5357.peg.1875 TY-2482 strain   
                                                                 │││├─ Escherichia coli 042   
                                                                 │││├─ Escherichia coli 1044A   
                                                                 │││├─ Escherichia coli 1212A   
                                                                 │││├─ Escherichia coli 53638   
                                                                 │││├─ Escherichia coli 536A   
                                                                 │││├─ Escherichia coli 55989   
                                                                 │││├─ Escherichia coli ATCC 8739   
                                                                 └┤│├─ Escherichia coli B088   
                                                                  ││├─ Escherichia coli B171   
                                                                  ││├─ Escherichia coli B7A   
                                                                  ││├─ Escherichia coli (DE3) BL21(DE3)   
                                                                  ││├─ Escherichia coli DH1   
                                                                  ││├─ Escherichia coli E110019   
                                                                  ││├─ Escherichia coli E110019   
                                                                  ││├─ Escherichia coli E22   
                                                                  ││├─ Escherichia coli E24377A   
                                                                  ││├─ Escherichia coli EC4100B   
                                                                  ││├─ Escherichia coli FVEC1302   
                                                                  ││├─ Escherichia coli H299   
                                                                  ││├─ Escherichia coli H736   
                                                                  ││├─ Escherichia coli IAI1   
                                                                  ││├─ Escherichia coli IAI39   
                                                                  └┤├─ Escherichia coli KO11   
                                                                   │├─ Escherichia coli MS 115-1   
                                                                   │├─ Escherichia coli MS 119-7   
                                                                   │├─ Escherichia coli MS 145-7   
                                                                   │├─ Escherichia coli MS 175-1   
                                                                   │├─ Escherichia coli MS 196-1   
                                                                   │├─ Escherichia coli MS 69-1   
                                                                   │├─ Escherichia coli MS 84-1   
                                                                   │├─ Escherichia coli O157:H7   
                                                                   │├─ Escherichia coli O157:H7 EDL933   
                                                                   │├─ Escherichia coli O157:H7 str. EC4042   
                                                                   │├─ Escherichia coli O157:H7 str. EC4076   
                                                                   │├─ Escherichia coli O157:H7 str. EC4115   
                                                                   │├─ Escherichia coli O157:H7 str. EC4206   
                                                                   │├─ Escherichia coli O157:H7 str. EC4486   
                                                                   │├─ Escherichia coli O157:H7 str. EC508   
                                                                   │├─ Escherichia coli O157:H7 str. FRIK2000   
                                                                   │├─ Escherichia coli O157:H7 str. Sakai   
                                                                   │├─ Escherichia coli O157:H7 str. TW14588   
                                                                   │├─ Escherichia coli OP50   
                                                                   │├─ Escherichia coli SMS-3-5   
                                                                   │├─ Escherichia coli TA271   
                                                                   │├─ Escherichia coli UMN026   
                                                                   │├─ Escherichia coli W   
                                                                   │├─ Escherichia coli str. K-12 substr. DH10B   
                                                                   │├─ Escherichia coli str. K-12 substr. MG1655   
                                                                   └┼─ Escherichia coli str. K-12 substr. MG1655   
                                                                    ├─ Escherichia coli str. K-12 substr. DH10B   
                                                                    ├─ Escherichia coli W3110   
                                                                    ├─ Escherichia coli W   
                                                                    ├─ Escherichia coli TA280   
                                                                    ├─ Escherichia coli TA143   
                                                                    ├─ Escherichia coli SE11   
                                                                    ├─ Escherichia coli O55:H7 str. CB9615   
                                                                    ├─ Escherichia coli O157:H7 str. TW14359   
                                                                    ├─ Escherichia coli O157:H7 str. FRIK966   
                                                                    ├─ Escherichia coli O157:H7 str. EC869   
                                                                    ├─ Escherichia coli O157:H7 str. EC4501   
                                                                    ├─ Escherichia coli O157:H7 str. EC4401   
                                                                    ├─ Escherichia coli O157:H7 str. EC4196   
                                                                    ├─ Escherichia coli O157:H7 str. EC4113   
                                                                    ├─ Escherichia coli O157:H7 str. EC4045   
                                                                    ├─ Escherichia coli O157:H7 str. EC4024   
                                                                    ├─ Escherichia coli O157:H7 EDL933   
                                                                    ├─ Escherichia coli O103:H2 str. 12009   
                                                                    ├─ Escherichia coli MS 78-1   
                                                                    ├─ Escherichia coli MS 198-1   
                                                                    ├─ Escherichia coli MS 187-1   
                                                                    ├─ Escherichia coli MS 146-1   
                                                                    ├─ Escherichia coli MS 124-1   
                                                                    ├─ Escherichia coli MS 116-1   
                                                                    ├─ Escherichia coli MS 107-1   
                                                                    ├─ Escherichia coli K12   
                                                                    ├─ Escherichia coli IAI39   
                                                                    ├─ Escherichia coli IAI1   
                                                                    ├─ Escherichia coli H591   
                                                                    ├─ Escherichia coli FVEC1412   
                                                                    ├─ Escherichia coli ETEC H10407   
                                                                    ├─ Escherichia coli E24377A   
                                                                    ├─ Escherichia coli E22   
                                                                    ├─ Escherichia coli E110019   
                                                                    ├─ Escherichia coli E110019   
                                                                    ├─ Escherichia coli E110019   
                                                                    ├─ Escherichia coli BW2952   
                                                                    ├─ Escherichia coli BL21   
                                                                    ├─ Escherichia coli B7A   
                                                                    ├─ Escherichia coli B171   
                                                                    ├─ Escherichia coli B str. REL606   
                                                                    ├─ Escherichia coli ATCC 8739   
                                                                    ├─ Escherichia coli 55989   
                                                                    ├─ Escherichia coli 53638   
                                                                    ├─ Escherichia coli 1827-70   
                                                                    ├─ Escherichia coli 1125A   
                                                                    ├─ Escherichia coli 101-1   
                                                                    ├─ Escherichia coli 042   
                                                                    └─ fig|1040638.4.peg.2063 O104:H4 str. LB226692   
  
Nickel transport system permease protein NikC (TC 3.A.1.5.3) (135)
Peptide transport system permease protein sapC (TC 3.A.1.5.5) (131)
Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) (124)
Dipeptide transport system permease protein DppC (TC 3.A.1.5.2); Putative hemine transporter ATP-binding subunit (100)
Glutothione ABC transporter permease protein (84)
Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) (46)
putative peptide transport system integral membrane protein (8)
predicted peptide transporter subunit (1)
Others (10)