fig|1040638.4.peg.206   Escherichia coli O104:H4 str. LB226692                                               MANYQLNEQLLEGCRPWIVIFDDVLTAGSHFKAMKSLILQHIPEACILGLFVARTTRGAQII
fig|585397.7.peg.280   Escherichia coli ED1a                  MLDYWELVVQNASTIASHTATNRPSPEAIMTNYQLNEQLLEGCRPWIVIFDDVLTAGSHFKAMKSLILQHIPEACILGLFVARTTRGAQII
fig|6666666.5357.peg.1083   Escherichia coli TY-2482                                               MANYQLNEQLLEGCRPWIVIFDDVLTAGSHFKAMKSLILQHIPEACILGLFVARTTRGAQII
fig|585395.4.peg.3982   Escherichia coli O103:H2 str. 12009                                               MANYQLNEQLLEGCRPWIVIFDDVLTAGSHFKAMKSLILQHIPEACILGLFVARTTRGAQII
fig|585397.9.peg.280   Escherichia coli ED1a     MTEILRIAKTYEPMLDYWELVVQNASTIASHTATNRPSPEAIMTNYQLNEQLLEGCRPWIVIFDDVLTAGSHFKAMKSLILQHIPEACILGLFVARTTRGAQII
Consen1   Primary consensus                  MLDYWELVVQNASTIASHTATNRPSPEAIMaNYQLNEQLLEGCRPWIVIFDDVLTAGSHFKAMKSLILQHIPEACILGLFVARTTRGAQII
Consen2   Secondary consensus                                                t                                                            

Consensus 1 (when a gap)
Conservative difference
Consensus 2 (when a gap)
Nonconservative diff.
Other character