┌─ Escherichia coli (1-259/261) F11   
                                                                    ┌┴─ Escherichia coli (1-258/260) MS 107-1   
                                                                   ┌┴─ Escherichia coli (1-258/260) 536 (2)  
                                                                  ┌┴┬─ Escherichia coli (1-258/260) 83972 (6)  
                                                                 ┌┤ └─ Escherichia coli (1-259/261) CFT073   
                                                                ┌┤└─ Escherichia coli (1-258/260) ED1a (6)  
                                 ┌──────────────────────────────┤└─ Escherichia coli (1-258/260) MS 200-1   
                                 │                              └┬─ Escherichia coli (1-258/260) MS 200-1   
                                 │                               └┬─ fig|1040638.4.peg.675 O104:H4 (1-258/260) str. LB226692 (6)  
┌────────────────────────────────┤                                └─ Escherichia coli (1-259/261) 042   
│                                │                 ┌─ Escherichia coli (1-251/252) SMS-3-5   
│                                └─────────────────┤ ┌─ fig|1040638.4.peg.4684 O104:H4 (1-251/252) str. LB226692 (23)  
│                                                  │┌┴─ Escherichia coli (1-251/252) WV_060327   
│                                                  └┤┌─ Escherichia coli (1-251/252) UM146 (2)  
│                                                   └┤ ┌─ Escherichia coli (1-251/252) 2362-75 (10)  
│                                                    └┬┴─ Escherichia coli (1-251/252) FVEC1302 (4)  
│                                                     └┬─ Escherichia coli (1-251/252) MS 124-1 (1)  
│                                                      └─ Escherichia coli (1-251/252) K12 (85)  
│                                                               ┌─ Escherichia coli (1-249/251) K12 (114)  
│                                                              ┌┴─ Escherichia coli (1-249/251) 1827-70   
│                                                             ┌┴─ Escherichia coli (1-249/251) IAI39 (1)  
│                                                            ┌┴─ Escherichia coli (1-249/251) MS 107-1   
│     ┌──────────────────────────────────────────────────────┴─ Escherichia coli (1-249/251) E2348/69   
│     │                                                ┌─ Escherichia coli (12-272/274) MS 116-1   
│     │                                               ┌┴─ Escherichia coli (12-266/269) O111:H- str. 11128 (1)  
┤     │                                              ┌┴─ Escherichia coli (12-266/269) K12 (95)  
│     │                                             ┌┴─ Escherichia coli (18-266/269) 042 (12)  
│     │                                            ┌┴─ Escherichia coli (12-266/269) MS 21-1   
│     │                                           ┌┴┬─ Escherichia coli (12-266/269) E24377A (1)  
│     │                     ┌─────────────────────┤ └─ Escherichia coli (12-266/269) MS 182-1 (1)  
│     │                     │                     └┬─ Escherichia coli (12-272/274) APEC O1 (6)  
│     │                     │                      └┬─ Escherichia coli (12-272/274) 2362-75 (1)  
│     │                 ┌───┤                       └─ Escherichia coli (12-272/274) WV_060327   
│     │                 │   │                        ┌─ Escherichia coli (3-251/257) MS 21-1 (1)  
│     │                 │   └────────────────────────┤┌─ Escherichia coli (3-251/257) 042 (11)  
│     │                 │                            └┤ ┌─ Escherichia coli (2-251/257) MS 182-1   
│     │                 │                             └┬┴─ fig|1040638.4.peg.2569 O104:H4 (3-251/257) str. LB226692 (17)  
│     │                 │                              └┬─ Escherichia coli (3-251/257) K12 (41)  
│     │         ┌───────┤                               └┬─ Escherichia coli (3-251/257) ETEC H10407   
│     │         │       │                                └┬─ Escherichia coli (3-251/257) 1044A (23)  
│     │         │       │                                 └┬─ Escherichia coli (3-251/257) M718   
│     │         │       │                                  └─ Escherichia coli (3-251/257) 536 (26)  
└─────┤         │       │                        ┌─ Escherichia coli (3-227/244) 536 (15)  
      │         │       └───────────────────────┬┴─ Escherichia coli (8-242/259) APEC O1 (4)  
      │  ┌──────┤                               └┬─ Escherichia coli (8-242/259) O157:H7 (11)  
      │  │      │                                └┬─ Escherichia coli (3-227/244) 1125A (18)  
      │  │      │                                 └─ Escherichia coli (3-227/244) O103:H2 str. 12009   
      │  │      │                                                   ┌─ Escherichia coli (8-253/260) MS 145-7 (1)  
      │  │      │       ┌───────────────────────────────────────────┴─ Escherichia coli (8-253/260) K12 (20)  
      │  │      └───────┤          ┌──────────────────────── Escherichia coli APEC O1 (4)  
      │  │              └──────────┤                           ┌─ Escherichia coli (6-255/255) NC101   
      │  │                         └───────────────────────────┤┌─ Escherichia coli (6-255/255) ABU 83972 (9)  
      │  │                                                     └┤┌─ Escherichia coli (6-255/255) 536   
      │  │                                                      └┤ ┌─ Escherichia coli (6-255/255) IHE3034   
      │  │                                                       │┌┴─ Escherichia coli (6-255/255) H299   
      │  │                                                       └┤┌─ Escherichia coli (6-255/255) 2362-75 (13)  
      │  │                                                        └┤ ┌─ fig|1040638.4.peg.2605 O104:H4 (6-255/255) str. LB226692 (32)  
      │  │                                                         └┬┴─ Escherichia coli (6-255/255) MS 84-1   
      │  │                                                          └┬─ Escherichia coli (16-265/265) K12 (16)  
      │  │                                                           └─ Escherichia coli (6-255/255) 101-1 (12)  
      │  │                                                   ┌─ Escherichia coli (1-239/240) SMS-3-5   
      │  │                                                  ┌┴─ Escherichia coli (6-251/252) M605   
      └──┤                                                 ┌┴─ Escherichia coli (6-251/252) TA206   
         │                                                ┌┴─ Escherichia coli (1-239/240) O127:H6 str. E2348/69 (1)  
         │                                               ┌┴┬─ Escherichia coli (6-251/252) O157:H7 str. EC508   
         │                                              ┌┤ └─ Escherichia coli (6-251/252) SE15   
         │                                              │└┬─ fig|1040638.4.peg.3838 O104:H4 (6-251/252) str. LB226692 (76)  
         │                                             ┌┤ └┬─ Escherichia coli (6-251/252) E110019 (1)  
         │                                             ││  └─ Escherichia coli (6-251/252) 042 (1)  
         │                                             │└┬─ Escherichia coli (6-251/252) E24377A (1)  
         │                                            ┌┤ └┬─ Escherichia coli (6-251/252) K12 (16)  
         │                                            ││  └┬─ Escherichia coli (1-239/240) str. K-12 substr. DH10B   
         │                                            ││   └─ Escherichia coli (1-239/240) B088   
         │      ┌─────────────────────────────────────┤└┬─ Escherichia coli (6-251/252) MS 187-1   
         │      │                                     │ └─ Escherichia coli (6-251/252) M718   
         │      │                                     └─ Escherichia coli (6-251/252) 1827-70 (2)  
         │      │                              ┌─ Escherichia coli (6-249/252) MS 78-1   
         │      │                             ┌┴─ Escherichia coli (6-249/252) B185   
         │      │                            ┌┴─ Escherichia coli (6-249/252) K12 (62)  
         │      │                           ┌┴─ Escherichia coli (6-249/252) DH1   
         │      │                          ┌┴┬─ Escherichia coli (6-249/252) 1827-70 (7)  
         └──────┤                          │ └┬─ Escherichia coli (6-249/252) B str. REL606   
                │                         ┌┤  └─ Escherichia coli (6-249/252) 101-1 (3)  
                │                        ┌┤└─ Escherichia coli (6-249/252) 1044A (25)  
                │                        │└┬─ Escherichia coli (6-249/252) 2362-75 (26)  
                │            ┌───────────┤ └─ Escherichia coli (16-266/269) E2348/69   
                │            │           └─── Escherichia coli (6-249/252) O157:H7 str. EC4024   
                │            │                            ┌─ Escherichia coli E2348/69 (1)  
                │            │                           ┌┴─ Escherichia coli 536 (4)  
                └────────────┤                          ┌┴─ Escherichia coli 2362-75 (8)  
                             │                         ┌┴─ Escherichia coli EC4100B   
                             │                        ┌┴─ fig|1040638.4.peg.1285 O104:H4 str. LB226692 (24)  
                             │                  ┌─────┴─ Escherichia coli O83:H1 str. NRG 857C   
                             └──────────────────┤     ┌── Escherichia coli (1-255/266) O157:H7 str. EC4024   
                                                └─────┤   ┌─ Escherichia coli (1-260/261) M605   
                                                      └──┬┴─ Escherichia coli (2-244/245) SE15   
                                                         └┬─ Escherichia coli (2-244/245) 53638 (13)  
                                                          └┬─ Escherichia coli (9-268/269) O157:H7 EDL933 (1)  
                                                           └┬─ Escherichia coli (9-268/269) E24377A (1)  
                                                            └─ Escherichia coli (9-268/269) K12 (68)  
  
Putative HTH-type transcriptional regulator YdjF (15)
Deoxyribose operon repressor, DeoR family (13)
DeoR-type transcriptional regulator YihW (12)
Glycerol-3-phosphate regulon repressor, DeoR family (11)
Transcriptional repressor of aga operon (10)
Glucitol operon repressor (8)
Galactitol utilization operon repressor (5)
Putative transcriptional regulator YgbI, DeoR family (5)
Ascorbate utilization transcriptional regulator UlaR, HTH-type (5)
Hypothetical transcriptional regulator ygbI (4)
Putative regulatory protein (2)
Putative DeoR-family transcriptional regulator (2)
Glycerol-3-phosphate regulon repressor (1)
Putative deoxyribose operon repressor (1)
Others (6)