fig|1040638.4.peg.127   Escherichia coli O104:H4 str. LB226692     MSVAA-LSLSSAWPALSATVSAEIPYQIFRDFAENKGQFTPGTTNIFIYGKQGHLVGKLDKAPMADFSSATIITTGSLPPGNHTLYSPQYVVTAKHVSGSDTMSFGYAKNTYTAVGTNNNSGLDIKTRRLSKLVTEVAPAEVSDVGAVSGAYQAGGRFTAFYRLGGGCSTSKTKMVIVPKCIPMADFLLGEPSAR
fig|340184.3.peg.4473   Escherichia coli B7A (44-231/1366)      SVAVILSLSSTAQTLAATVSAEIPYQTFRDFAENKGLFTPGATNIAIYDKQGNQVDELGKAPMADFSSAT-ITTGSLPPGDHTLYSPQYVVTAKHVSGSDTMSFGYARNTYTAVGTNNNAGLDIKTRRLSKLVTEVAPAEVSDVGALSGAYQAGGRFTAFYRLGGGMQYIKDKNGNLTQVYTNGGFLVG     
fig|340184.6.peg.4686   Escherichia coli B7A (44-231/1366)      SVAVILSLSSTAQTLAATVSAEIPYQTFRDFAENKGLFTPGATNIAIYDKQGNQVDELGKAPMADFSSAT-ITTGSLPPGDHTLYSPQYVVTAKHVSGSDTMSFGYARNTYTAVGTNNNAGLDIKTRRLSKLVTEVAPAEVSDVGALSGAYQAGGRFTAFYRLGGGMQYIKDKNGNLTQVYTNGGFLVG     
Consen1   Primary consensus      SVAVILSLSSTAQTLAATVSAEIPYQTFRDFAENKGLFTPGATNIAIYDKQGNQVDELGKAPMADFSSAT-ITTGSLPPGDHTLYSPQYVVTAKHVSGSDTMSFGYARNTYTAVGTNNNAGLDIKTRRLSKLVTEVAPAEVSDVGALSGAYQAGGRFTAFYRLGGGMQYIKDKNGNLTQVYTNGGFLVG     
Consen2   Secondary consensus                                                                                                                                                                                                        

Consensus 1 (when a gap)
Conservative difference
Consensus 2 (when a gap)
Nonconservative diff.
Other character