fig|1040638.4.peg.1223
Escherichia coli O104:H4 str. LB226692
M
TQGAG
Y
L
E
F
KDS
--
Y
T
V
SAE
--
SGK
TWTGAGI
ITDKGTN
V
T
W
K
VNGV
A
GDNLHK
L
G
E
GTL
T
I
N
-
GTG
V
N
P
GGLK
T
GDG
I
VVLNQQ
A
D
TA
G
NI
QAFSSV
N
L
ASG
R
PTVVL
GDAR
QVN
P
DN
----
I
S
WG
Y
RGG
K
LDLNGN
AV
TF
T
R
L
Q
AAD
Y
GA
V
I
T
--
N
-
N
AQQK
S
Q
L
L
L
D-
-
-L
KAQDTNVS
E
PT
IGNISP
----
FGGT
GT
P
G
N
L
--
Y
SMILNSQTRFY
ILK
SAS
YG
NTL
WG
NSLNDPAQ
WE
F
VG
MNKNK
A
VQTVKD
R
ILAG
R
A
KQP
V
I
F
HG
Q
L
T
GN
M
D
VAIPQVXG--
---
GRKXIF
DG
SV
N
L
P
E
G
TL
S
Q
D
S
G
T
L
IF
QGHPV
I
HA
S
----
--
-
-
-
-
---------
-
----
--
-
ISG
S
AP-------------
-
-V
S
L
N
Q
K
DWENR
Q
F
T
M
KT
L
S
L
K
DA
D
F
H
L
S
RNA
S
L
NSD
I
K
S
D
N
-
S
H
I
T
LG
--
S
DR
A
F
V
D
-------
K
N
DG
T
G
NYVIPEE
G
T
S
VPDTVN
D
R
-
S
Q
Y
E
G
N
I
T
L
NHN
S
A
L
D
I
-
G
SR
F
T
GG
L
T
LM
T
VPS
ASPLRTSC
fig|216592.1.peg.2545
Escherichia coli 042 (371-781/1372)
VTQGAG
Y
L
E
F
KDS
--
Y
T
V
SAE
--
SGK
TWTGAGI
ITDKGTN
V
T
W
K
VNGV
A
GDNLHK
L
G
E
GTL
T
I
N
-
GTG
V
N
P
GGLK
T
GDG
I
VVLNQQ
A
D
TA
G
NI
QAFSSV
N
L
ASG
R
PTVVL
GDAR
QVN
P
DN
----
I
S
WG
Y
RGG
K
LDLNGN
AV
TF
T
R
L
Q
AAD
Y
GA
V
I
T
--
N
-
N
AQQK
S
Q
L
L
L
D-
-
-L
KAQDTNVS
E
PT
IGNISP
----
FGGT
GT
P
G
N
L
--
Y
SMILNSQTRFY
ILK
SAS
YG
NTL
WG
NSLNDPAQ
WE
F
VG
MDKNK
A
VQTVKD
R
ILAG
R
A
KQP
V
I
F
HG
Q
L
T
GN
M
D
VAIPQVPG--
---
GRKVIF
DG
SV
N
L
P
E
G
TL
S
Q
D
S
G
T
L
IF
QGHPV
I
HA
S
----
--
-
-
-
-
---------
-
----
--
-
ISG
S
AP-------------
-
-V
S
L
N
Q
K
DWENR
Q
F
T
M
KT
L
S
L
K
DA
D
F
H
L
S
RNA
S
L
NSD
I
K
S
D
N
-
S
H
I
T
LG
--
S
DR
A
F
V
D
-------
K
N
DG
T
G
NYVIPEE
G
T
S
VPDTVN
D
R
-
S
Q
Y
E
G
N
I
T
L
NHN
S
A
L
D
I
-
G
SR
F
T
GGI
fig|6666666.5357.peg.2551
Escherichia coli TY-2482 (30-440/1031)
VTQGAG
Y
L
E
F
KDS
--
Y
T
V
SAE
--
SGK
TWTGAGI
ITDKGTN
V
T
W
K
VNGV
A
GDNLHK
L
G
E
GTL
T
I
N
-
GTG
V
N
P
GGLK
T
GDG
I
VVLNQQ
A
D
TA
G
NI
QAFSSV
N
L
ASG
R
PTVVL
GDAR
QVN
P
DN
----
I
S
WG
Y
RGG
K
LDLNGN
AV
TF
T
R
L
Q
AAD
Y
GA
V
I
T
--
N
-
N
AQQK
S
Q
L
L
L
D-
-
-L
KAQDTNVS
E
PT
IGNISP
----
FGGT
GT
P
G
N
L
--
Y
SMILNSQTRFY
ILK
SAS
YG
NTL
WG
NSLNDPAQ
WE
F
VG
MNKNK
A
VQTVKD
R
ILAG
R
A
KQP
V
I
F
HG
Q
L
T
GN
M
D
VAIPQVPG--
---
GRKVIF
DG
SV
N
L
P
E
G
TL
S
Q
D
S
G
T
L
IF
QGHPV
I
HA
S
----
--
-
-
-
-
---------
-
----
--
-
ISG
S
AP-------------
-
-V
S
L
N
Q
K
DWENR
Q
F
T
M
KT
L
S
L
K
DA
D
F
H
L
S
RNA
S
L
NSD
I
K
S
D
N
-
S
H
I
T
LG
--
S
DR
A
F
V
D
-------
K
N
DG
T
G
NYVIPEE
G
T
S
VPDTVN
D
R
-
S
Q
Y
E
G
N
I
T
L
NHN
S
A
L
D
I
-
G
SR
F
T
GGI
fig|216592.3.peg.4768
Escherichia coli 042 (30-440/1031)
VTQGAG
Y
L
E
F
KDS
--
Y
T
V
SAE
--
SGK
TWTGAGI
ITDKGTN
V
T
W
K
VNGV
A
GDNLHK
L
G
E
GTL
T
I
N
-
GTG
V
N
P
GGLK
T
GDG
I
VVLNQQ
A
D
TA
G
NI
QAFSSV
N
L
ASG
R
PTVVL
GDAR
QVN
P
DN
----
I
S
WG
Y
RGG
K
LDLNGN
AV
TF
T
R
L
Q
AAD
Y
GA
V
I
T
--
N
-
N
AQQK
S
Q
L
L
L
D-
-
-L
KAQDTNVS
E
PT
IGNISP
----
FGGT
GT
P
G
N
L
--
Y
SMILNSQTRFY
ILK
SAS
YG
NTL
WG
NSLNDPAQ
WE
F
VG
MDKNK
A
VQTVKD
R
ILAG
R
A
KQP
V
I
F
HG
Q
L
T
GN
M
D
VAIPQVPG--
---
GRKVIF
DG
SV
N
L
P
E
G
TL
S
Q
D
S
G
T
L
IF
QGHPV
I
HA
S
----
--
-
-
-
-
---------
-
----
--
-
ISG
S
AP-------------
-
-V
S
L
N
Q
K
DWENR
Q
F
T
M
KT
L
S
L
K
DA
D
F
H
L
S
RNA
S
L
NSD
I
K
S
D
N
-
S
H
I
T
LG
--
S
DR
A
F
V
D
-------
K
N
DG
T
G
NYVIPEE
G
T
S
VPDTVN
D
R
-
S
Q
Y
E
G
N
I
T
L
NHN
S
A
L
D
I
-
G
SR
F
T
GGI
fig|585055.6.peg.3317
Escherichia coli 55989 (30-440/1031)
VTQGAG
Y
L
E
F
KDS
--
Y
T
V
SAE
--
SGK
TWTGAGI
ITDKGTN
V
T
W
K
VNGV
A
GDNLHK
L
G
E
GTL
T
I
N
-
GTG
V
N
P
GGLK
T
GDG
I
VVLNQQ
A
D
TA
G
NI
QAFSSV
N
L
ASG
R
PTVVL
GDAR
QVN
P
DN
----
I
S
WG
Y
RGG
K
LDLNGN
AV
TF
T
R
L
Q
AAD
Y
GA
V
I
T
--
N
-
N
AQQK
S
Q
L
L
L
D-
-
-L
KAQDTNVS
E
PT
IGNISP
----
FGGT
GT
P
G
N
L
--
Y
SMILNSQTRFY
ILK
SAS
YG
NTL
WG
NSLNDPAQ
WE
F
VG
MDKNK
A
VQTVKD
R
ILAG
R
A
KQP
V
I
F
HG
Q
L
T
GN
M
D
VAIPQVPG--
---
GRKVIF
DG
SV
N
L
P
E
G
TL
S
Q
D
S
G
T
L
IF
QGHPV
I
HA
S
----
--
-
-
-
-
---------
-
----
--
-
ISG
S
AP-------------
-
-V
S
L
N
Q
K
DWENR
Q
F
T
M
KT
L
S
L
K
DA
D
F
H
L
S
RNA
S
L
NSD
I
K
S
D
N
-
S
H
I
T
LG
--
S
DR
A
F
V
D
-------
K
N
DG
T
G
NYVIPEE
G
T
S
VPDTVN
D
R
-
S
Q
Y
E
G
N
I
T
L
NHN
S
A
L
D
I
-
G
SR
F
T
GGI
fig|585055.6.peg.4683
Escherichia coli 55989 (30-440/1031)
VTQGAG
Y
L
E
F
KDS
--
Y
T
V
SAE
--
SGK
TWTGAGI
ITDKGTN
V
T
W
K
VNGV
A
GDNLHK
L
G
E
GTL
T
I
N
-
GTG
V
N
P
GGLK
T
GDG
I
VVLNQQ
A
D
TA
G
NI
QAFSSV
N
L
ASG
R
PTVVL
GDAR
QVN
P
DN
----
I
S
WG
Y
RGG
K
LDLNGN
AV
TF
T
R
L
Q
AAD
Y
GA
V
I
T
--
N
-
N
AQQK
S
Q
L
L
L
D-
-
-L
KAQDTNVS
E
PT
IGNISP
----
FGGT
GT
P
G
N
L
--
Y
SMILNSQTRFY
ILK
SAS
YG
NTL
WG
NSLNDPAQ
WE
F
VG
MDKNK
A
VQTVKD
R
ILAG
R
A
KQP
V
I
F
HG
Q
L
T
GN
M
D
VAIPQVPG--
---
GRKVIF
DG
SV
N
L
P
E
G
TL
S
Q
D
S
G
T
L
IF
QGHPV
I
HA
S
----
--
-
-
-
-
---------
-
----
--
-
ISG
S
AP-------------
-
-V
S
L
N
Q
K
DWENR
Q
F
T
M
KT
L
S
L
K
DA
D
F
H
L
S
RNA
S
L
NSD
I
K
S
D
N
-
S
H
I
T
LG
--
S
DR
A
F
V
D
-------
K
N
DG
T
G
NYVIPEE
G
T
S
VPDTVN
D
R
-
S
Q
Y
E
G
N
I
T
L
NHN
S
A
L
D
I
-
G
SR
F
T
GGI
fig|585055.8.peg.3321
Escherichia coli 55989 (30-440/1031)
VTQGAG
Y
L
E
F
KDS
--
Y
T
V
SAE
--
SGK
TWTGAGI
ITDKGTN
V
T
W
K
VNGV
A
GDNLHK
L
G
E
GTL
T
I
N
-
GTG
V
N
P
GGLK
T
GDG
I
VVLNQQ
A
D
TA
G
NI
QAFSSV
N
L
ASG
R
PTVVL
GDAR
QVN
P
DN
----
I
S
WG
Y
RGG
K
LDLNGN
AV
TF
T
R
L
Q
AAD
Y
GA
V
I
T
--
N
-
N
AQQK
S
Q
L
L
L
D-
-
-L
KAQDTNVS
E
PT
IGNISP
----
FGGT
GT
P
G
N
L
--
Y
SMILNSQTRFY
ILK
SAS
YG
NTL
WG
NSLNDPAQ
WE
F
VG
MDKNK
A
VQTVKD
R
ILAG
R
A
KQP
V
I
F
HG
Q
L
T
GN
M
D
VAIPQVPG--
---
GRKVIF
DG
SV
N
L
P
E
G
TL
S
Q
D
S
G
T
L
IF
QGHPV
I
HA
S
----
--
-
-
-
-
---------
-
----
--
-
ISG
S
AP-------------
-
-V
S
L
N
Q
K
DWENR
Q
F
T
M
KT
L
S
L
K
DA
D
F
H
L
S
RNA
S
L
NSD
I
K
S
D
N
-
S
H
I
T
LG
--
S
DR
A
F
V
D
-------
K
N
DG
T
G
NYVIPEE
G
T
S
VPDTVN
D
R
-
S
Q
Y
E
G
N
I
T
L
NHN
S
A
L
D
I
-
G
SR
F
T
GGI
fig|585055.8.peg.4688
Escherichia coli 55989 (30-440/1031)
VTQGAG
Y
L
E
F
KDS
--
Y
T
V
SAE
--
SGK
TWTGAGI
ITDKGTN
V
T
W
K
VNGV
A
GDNLHK
L
G
E
GTL
T
I
N
-
GTG
V
N
P
GGLK
T
GDG
I
VVLNQQ
A
D
TA
G
NI
QAFSSV
N
L
ASG
R
PTVVL
GDAR
QVN
P
DN
----
I
S
WG
Y
RGG
K
LDLNGN
AV
TF
T
R
L
Q
AAD
Y
GA
V
I
T
--
N
-
N
AQQK
S
Q
L
L
L
D-
-
-L
KAQDTNVS
E
PT
IGNISP
----
FGGT
GT
P
G
N
L
--
Y
SMILNSQTRFY
ILK
SAS
YG
NTL
WG
NSLNDPAQ
WE
F
VG
MDKNK
A
VQTVKD
R
ILAG
R
A
KQP
V
I
F
HG
Q
L
T
GN
M
D
VAIPQVPG--
---
GRKVIF
DG
SV
N
L
P
E
G
TL
S
Q
D
S
G
T
L
IF
QGHPV
I
HA
S
----
--
-
-
-
-
---------
-
----
--
-
ISG
S
AP-------------
-
-V
S
L
N
Q
K
DWENR
Q
F
T
M
KT
L
S
L
K
DA
D
F
H
L
S
RNA
S
L
NSD
I
K
S
D
N
-
S
H
I
T
LG
--
S
DR
A
F
V
D
-------
K
N
DG
T
G
NYVIPEE
G
T
S
VPDTVN
D
R
-
S
Q
Y
E
G
N
I
T
L
NHN
S
A
L
D
I
-
G
SR
F
T
GGI
fig|1040638.4.peg.2520
Escherichia coli O104:H4 str. LB226692 (69-479/1070)
VTQGAG
Y
L
E
F
KDS
--
Y
T
V
SAE
--
SGK
TWTGAGI
ITDKGTN
V
T
W
K
VNGV
A
GDNLHK
L
G
E
GTL
T
I
N
-
GTG
V
N
P
GGLK
T
GDG
I
VVLNQQ
A
D
TA
G
NI
QAFSSV
N
L
ASG
R
PTVVL
GDAR
QVN
P
DN
----
I
S
WG
Y
RGG
K
LDLNGN
AV
TF
T
R
L
Q
AAD
Y
GA
V
I
T
--
N
-
N
AQQK
S
Q
L
L
L
D-
-
-L
KAQDTNVS
E
PT
IGNISP
----
FGGT
GT
P
G
N
L
--
Y
SMILNSQTRFY
ILK
SAS
YG
NTL
WG
NSLNDPAQ
WE
F
VG
MNKNK
A
VQTVKD
R
ILAG
R
A
KQP
V
I
F
HG
Q
L
T
GN
M
D
VAIPQVPG--
---
GRKVIF
DG
SV
N
L
P
E
G
TL
S
Q
D
S
G
T
L
IF
QGHPV
I
HA
S
----
--
-
-
-
-
---------
-
----
--
-
ISG
S
AP-------------
-
-V
S
L
N
Q
K
DWENR
Q
F
T
M
KT
L
S
L
K
DA
D
F
H
L
S
RNA
S
L
NSD
I
K
S
D
N
-
S
H
I
T
LG
--
S
DR
A
F
V
D
-------
K
N
DG
T
G
NYVIPEE
G
T
S
VPDTVN
D
R
-
S
Q
Y
E
G
N
I
T
L
NHN
S
A
L
D
I
-
G
SR
F
T
GGI
fig|655817.3.peg.332
Escherichia coli ABU 83972 (371-780/1371)
VTQGAG
Y
L
E
F
KDS
--
Y
T
V
SAE
--
SGK
TWTGAGI
ITDKGTN
V
T
W
K
VNGV
A
GDNLHK
L
G
E
GTL
T
I
N
-
GTG
V
N
P
GGLK
T
GDG
T
VVLNQQ
A
D
TA
G
NV
QAFSSV
N
L
ASG
R
PTVVL
GDAR
QVN
P
DN
----
I
S
WG
Y
RGG
K
LDLNGN
AV
TF
T
R
L
Q
AAD
Y
GA
V
I
T
--
N
-
N
AQQK
S
R
L
L
L
D-
-
-L
KAQDTNVS
V
P
-
IGSISP
----
FGGT
GT
P
G
N
L
--
Y
SMILNGQTRFY
ILK
SAS
YG
NTL
WG
NSLNDPAQ
WE
F
VG
TDKNK
A
VQTVKD
R
ILAG
R
A
KQP
V
I
F
HG
Q
L
T
GN
M
D
VTIPQLPG--
---
GRKVIL
DG
SV
N
L
P
E
G
TL
S
E
D
S
G
T
L
IF
QGHPV
I
HA
S
----
--
-
-
-
-
---------
-
----
--
-
VSG
S
AP-------------
-
-V
S
L
N
Q
K
DWENR
Q
F
I
M
KT
L
S
L
K
DA
D
F
H
L
S
RNA
S
L
NSD
I
K
S
D
N
-
S
H
I
T
LG
--
S
DR
VF
V
D
-------
K
N
DG
T
G
NYVILEE
G
T
S
VPDTVN
D
R
-
S
Q
Y
E
G
N
I
T
L
DHN
S
T
L
D
I
-
G
SR
F
T
GGI
fig|199310.1.peg.333
Escherichia coli CFT073 (371-780/1371)
VTQGAG
Y
L
E
F
KDS
--
Y
T
V
SAE
--
SGK
TWTGAGI
ITDKGTN
V
T
W
K
VNGV
A
GDNLHK
L
G
E
GTL
T
I
N
-
GTG
V
N
P
GGLK
T
GDG
T
VVLNQQ
A
D
TA
G
NV
QAFSSV
N
L
ASG
R
PTVVL
GDAR
QVN
P
DN
----
I
S
WG
Y
RGG
K
LDLNGN
AV
TF
T
R
L
Q
AAD
Y
GA
V
I
T
--
N
-
N
AQQK
S
R
L
L
L
D-
-
-L
KAQDTNVS
V
P
-
IGSISP
----
FGGT
GT
P
G
N
L
--
Y
SMILNGQTRFY
ILK
SAS
YG
NTL
WG
NSLNDPAQ
WE
F
VG
TDKNK
A
VQTVKD
R
ILAG
R
A
KQP
V
I
F
HG
Q
L
T
GN
M
D
VTIPQLPG--
---
GRKVIL
DG
SV
N
L
P
E
G
TL
S
E
D
S
G
T
L
IF
QGHPV
I
HA
S
----
--
-
-
-
-
---------
-
----
--
-
VSG
S
AP-------------
-
-V
S
L
N
Q
K
DWENR
Q
F
I
M
KT
L
S
L
K
DA
D
F
H
L
S
RNA
S
L
NSD
I
K
S
D
N
-
S
H
I
T
LG
--
S
DR
VF
V
D
-------
K
N
DG
T
G
NYVILEE
G
T
S
VPDTVN
D
R
-
S
Q
Y
E
G
N
I
T
L
DHN
S
T
L
D
I
-
G
SR
F
T
GGI
fig|656440.3.peg.100
Escherichia coli TA206 (110-519/1110)
VTQGAG
Y
L
E
F
KDS
--
Y
T
V
SAE
--
SGK
TWTGAGI
ITDKGTN
V
T
W
K
VNGV
A
GDNLHK
L
G
E
GTL
T
I
N
-
GTG
V
N
P
GGLK
T
GDG
T
VVLNQQ
A
D
TA
G
NV
QAFSSV
N
L
ASG
R
PTVVL
GDAR
QVN
P
DN
----
I
S
WG
Y
RGG
K
LDLNGN
AV
TF
T
R
L
Q
AAD
Y
GA
V
I
T
--
N
-
N
AQQK
S
R
L
L
L
D-
-
-L
KAQDTNVS
V
P
-
IGSISP
----
FGGT
GT
P
G
N
L
--
Y
SMILNGQTRFY
ILK
SAS
YG
NTL
WG
NSLNDPAQ
WE
F
VG
MDKNK
A
VQTVKD
R
ILAG
R
A
KQP
V
I
F
HG
Q
L
T
GN
M
D
VTIPQLPG--
---
GRKVIL
DG
SV
N
L
P
E
G
TL
S
E
D
S
G
T
L
IF
QGHPV
I
HA
S
----
--
-
-
-
-
---------
-
----
--
-
VSG
S
AP-------------
-
-V
S
L
N
Q
K
DWENR
Q
F
I
M
KT
L
S
L
K
DA
D
F
H
L
S
RNA
S
L
NSD
I
K
S
D
N
-
S
H
I
T
LG
--
S
DR
VF
V
D
-------
K
N
DG
T
G
NYVILEE
G
T
S
VPDTVN
D
R
-
S
Q
Y
E
G
N
I
T
L
DHN
S
T
L
D
I
-
G
SR
F
T
GGI
fig|525281.3.peg.2675
Escherichia coli 83972 (110-519/1110)
VTQGAG
Y
L
E
F
KDS
--
Y
T
V
SAE
--
SGK
TWTGAGI
ITDKGTN
V
T
W
K
VNGV
A
GDNLHK
L
G
E
GTL
T
I
N
-
GTG
V
N
P
GGLK
T
GDG
T
VVLNQQ
A
D
TA
G
NV
QAFSSV
N
L
ASG
R
PTVVL
GDAR
QVN
P
DN
----
I
S
WG
Y
RGG
K
LDLNGN
AV
TF
T
R
L
Q
AAD
Y
GA
V
I
T
--
N
-
N
AQQK
S
R
L
L
L
D-
-
-L
KAQDTNVS
V
P
-
IGSISP
----
FGGT
GT
P
G
N
L
--
Y
SMILNGQTRFY
ILK
SAS
YG
NTL
WG
NSLNDPAQ
WE
F
VG
TDKNK
A
VQTVKD
R
ILAG
R
A
KQP
V
I
F
HG
Q
L
T
GN
M
D
VTIPQLPG--
---
GRKVIL
DG
SV
N
L
P
E
G
TL
S
E
D
S
G
T
L
IF
QGHPV
I
HA
S
----
--
-
-
-
-
---------
-
----
--
-
VSG
S
AP-------------
-
-V
S
L
N
Q
K
DWENR
Q
F
I
M
KT
L
S
L
K
DA
D
F
H
L
S
RNA
S
L
NSD
I
K
S
D
N
-
S
H
I
T
LG
--
S
DR
VF
V
D
-------
K
N
DG
T
G
NYVILEE
G
T
S
VPDTVN
D
R
-
S
Q
Y
E
G
N
I
T
L
DHN
S
T
L
D
I
-
G
SR
F
T
GGI
fig|199310.4.peg.328
Escherichia coli CFT073 (110-519/1110)
VTQGAG
Y
L
E
F
KDS
--
Y
T
V
SAE
--
SGK
TWTGAGI
ITDKGTN
V
T
W
K
VNGV
A
GDNLHK
L
G
E
GTL
T
I
N
-
GTG
V
N
P
GGLK
T
GDG
T
VVLNQQ
A
D
TA
G
NV
QAFSSV
N
L
ASG
R
PTVVL
GDAR
QVN
P
DN
----
I
S
WG
Y
RGG
K
LDLNGN
AV
TF
T
R
L
Q
AAD
Y
GA
V
I
T
--
N
-
N
AQQK
S
R
L
L
L
D-
-
-L
KAQDTNVS
V
P
-
IGSISP
----
FGGT
GT
P
G
N
L
--
Y
SMILNGQTRFY
ILK
SAS
YG
NTL
WG
NSLNDPAQ
WE
F
VG
TDKNK
A
VQTVKD
R
ILAG
R
A
KQP
V
I
F
HG
Q
L
T
GN
M
D
VTIPQLPG--
---
GRKVIL
DG
SV
N
L
P
E
G
TL
S
E
D
S
G
T
L
IF
QGHPV
I
HA
S
----
--
-
-
-
-
---------
-
----
--
-
VSG
S
AP-------------
-
-V
S
L
N
Q
K
DWENR
Q
F
I
M
KT
L
S
L
K
DA
D
F
H
L
S
RNA
S
L
NSD
I
K
S
D
N
-
S
H
I
T
LG
--
S
DR
VF
V
D
-------
K
N
DG
T
G
NYVILEE
G
T
S
VPDTVN
D
R
-
S
Q
Y
E
G
N
I
T
L
DHN
S
T
L
D
I
-
G
SR
F
T
GGI
fig|656393.3.peg.873
Escherichia coli H299 (110-519/1110)
VTQGAG
Y
L
E
F
KDS
--
Y
T
V
SAE
--
SGK
TWTGAGI
ITDKGTN
V
T
W
K
VNGV
A
GDNLHK
L
G
E
GTL
T
I
N
-
GTG
V
N
P
GGLK
T
GDG
T
VVLNQQ
A
D
TA
G
NV
QAFSSV
N
L
ASG
R
PTVVL
GDAR
QVN
P
DN
----
I
S
WG
Y
RGG
K
LDLNGN
AV
TF
T
R
L
Q
AAD
Y
GA
V
I
T
--
N
-
N
AQQK
S
R
L
L
L
D-
-
-L
KAQDTNVS
V
P
-
IGSISP
----
FGGT
GT
P
G
N
L
--
Y
SMILNGQTRFY
ILK
SAS
YG
NTL
WG
NSLNDPAQ
WE
F
VG
TDKNK
A
VQTVKD
R
ILAG
R
A
KQP
V
I
F
HG
Q
L
T
GN
M
D
VTIPQLPG--
---
GRKVIL
DG
SV
N
L
P
E
G
TL
S
E
D
S
G
T
L
IF
QGHPV
I
HA
S
----
--
-
-
-
-
---------
-
----
--
-
VSG
S
AP-------------
-
-V
S
L
N
Q
K
DWENR
Q
F
I
M
KT
L
S
L
K
DA
D
F
H
L
S
RNA
S
L
NSD
I
K
S
D
N
-
S
H
I
T
LG
--
S
DR
VF
V
D
-------
K
N
DG
T
G
NYVILEE
G
T
S
VPDTVN
D
R
-
S
Q
Y
E
G
N
I
T
L
DHN
S
T
L
D
I
-
G
SR
F
T
GGI
fig|749528.3.peg.4087
Escherichia coli MS 45-1 (110-519/1110)
VTQGAG
Y
L
E
F
KDS
--
Y
T
V
SAE
--
SGK
TWTGAGI
ITDKGTN
V
T
W
K
VNGV
A
GDNLHK
L
G
E
GTL
T
I
N
-
GTG
V
N
P
GGLK
T
GDG
T
VVLNQQ
A
D
TA
G
NV
QAFSSV
N
L
ASG
R
PTVVL
GDAR
QVN
P
DN
----
I
S
WG
Y
RGG
K
LDLNGN
AV
TF
T
R
L
Q
AAD
Y
GA
V
I
T
--
N
-
N
AQQK
S
R
L
L
L
D-
-
-L
KAQDTNVS
V
P
-
IGSISP
----
FGGT
GT
P
G
N
L
--
Y
SMILNGQTRFY
ILK
SAS
YG
NTL
WG
NSLNDPAQ
WE
F
VG
TDKNK
A
VQTVKD
R
ILAG
R
A
KQP
V
I
F
HG
Q
L
T
GN
M
D
VTIPQLPG--
---
GRKVIL
DG
SV
N
L
P
E
G
TL
S
E
D
S
G
T
L
IF
QGHPV
I
HA
S
----
--
-
-
-
-
---------
-
----
--
-
VSG
S
AP-------------
-
-V
S
L
N
Q
K
DWENR
Q
F
I
M
KT
L
S
L
K
DA
D
F
H
L
S
RNA
S
L
NSD
I
K
S
D
N
-
S
H
I
T
LG
--
S
DR
VF
V
D
-------
K
N
DG
T
G
NYVILEE
G
T
S
VPDTVN
D
R
-
S
Q
Y
E
G
N
I
T
L
DHN
S
T
L
D
I
-
G
SR
F
T
GGI
fig|749546.3.peg.3640
Escherichia coli MS 185-1 (110-518/1110)
VTQGAG
Y
L
E
F
KDS
--
Y
T
V
SAE
--
SGK
TWTGAGI
ITDKGTN
V
T
W
K
VNGV
A
GDNLHK
L
G
E
GTL
T
I
N
-
GTG
V
N
P
GGLK
T
GDG
T
VVLNQQ
A
D
TA
G
NV
QAFSSV
N
L
ASG
R
PTVVL
GDAR
QVN
P
DN
----
I
S
WG
Y
RGG
K
LDLNGN
AV
TF
T
R
L
Q
AAD
Y
GA
V
I
T
--
N
-
N
AQQK
S
R
L
L
L
D-
-
-L
KAQDTNVS
V
P
-
IGSISP
----
FGGT
GT
P
G
N
L
--
Y
SMILNGQTRFY
ILK
SAS
YG
NTL
WG
NSLNDPAQ
WE
F
VG
TDKNK
A
VQTVKD
R
ILAG
R
A
KQP
V
I
F
HG
Q
L
T
GN
M
D
VTIPQLPG--
---
GRKVIL
DG
SV
N
L
P
E
G
TL
S
E
D
S
G
T
L
IF
QGHPV
I
HA
S
----
--
-
-
-
-
---------
-
----
--
-
VSG
S
AP-------------
-
-V
S
L
N
Q
K
DWENR
Q
F
I
M
KT
L
S
L
K
DA
D
F
H
L
S
RNA
S
L
NSD
I
K
S
D
N
-
S
H
I
T
LG
--
S
DR
VF
V
D
-------
K
N
DG
T
G
NYVILEE
G
T
S
VPDTVN
D
R
-
S
Q
Y
E
G
N
I
T
L
DHN
S
T
L
D
I
-
G
SR
V
T
GG
fig|753642.3.peg.119
Escherichia coli NC101 (110-520/995)
VTQGAG
Y
L
E
F
KDS
--
Y
T
V
SAE
--
SGK
TWTGAGI
ITDKGTN
V
T
R
K
VNGV
A
GDNLHK
L
G
E
GTL
T
I
N
-
GTG
V
N
Q
GGLK
T
GDG
T
VVLNQQ
A
D
TA
G
NV
QAFSSV
S
L
ASG
C
PTVVL
GDAR
QVN
P
DN
----
I
S
WG
Y
RGG
K
LDLNGN
AV
TF
T
R
L
Q
AAD
Y
GA
V
I
T
--
N
-
H
AQQK
F
R
L
L
L
D-
-
-L
KAQDTNVS
E
PT
IGNIPP
----
FGGT
GT
L
G
N
L
--
Y
SMILNGQARFY
ILK
SAS
N
G
NTL
WG
NSLNDPVQ
WE
F
VG
TDKNK
A
VQTVKD
W
ILAG
R
A
KQP
V
I
F
HG
Q
L
S
GN
M
D
VAIPQLPG--
---
GRKVIF
DG
SV
N
L
P
E
G
TL
S
Q
D
S
G
T
L
TF
QGHPV
I
HA
S
----
--
-
-
-
-
---------
-
----
--
-
VRG
S
AS-------------
-
-V
S
L
N
Q
K
DWENR
Q
F
T
M
KT
L
S
L
K
DA
D
F
H
L
S
RNA
T
L
NSD
I
Q
S
D
N
-
S
H
I
T
LG
--
S
DR
VF
V
D
-------
K
N
DG
T
G
NYVSPEE
G
T
S
VPDTVN
D
R
-
S
Q
Y
E
G
N
I
T
L
NHN
S
T
L
D
I
-
G
SL
F
T
GGI
fig|340184.3.peg.4473
Escherichia coli B7A (380-782/1366)
V
N
QGAG
Y
L
Q
F
AND
--
Y
K
V
SAL
--
NGQ
TW
M
G
G
G
V
ITDKGTH
V
L
W
Q
VNGV
A
GDNLHK
L
G
E
GTL
M
VN
-
GTG
V
N
A
GGLKVGDG
T
V
I
LNQQ
L
D
TD
G
KV
QAFSSV
D
I
S
SG
R
PTVVL
SDSR
QVN
P
DN
----
I
S
WG
Y
RGG
R
LDLNGN
NL
TF
T
R
I
Q
AAD
Y
GA
I
I
T
--
N
-
T
SEKK
S
T
V
T
L
DL
Q
SL
KA
S
D
I
NV
P
-
--
INTINF
----
LGGR
GT
P
G
D
L
--
Y
--LVESTGQYY
ILK
ESS
Y
S
PFF
--
SDLNNPNI
W
Q
S
VG
KDRNK
A
IDTVKH
Q
KIE
-
A
S
SQP
Y
M
YHG
Q
L
N
GN
M
D
VNIPQLSG--
---
KDVLTL
DG
SV
N
L
P
E
G
SI
T
K
K
S
G
T
L
IF
QGHP
I
I
HA
G
----
--
-
-
-
-
---------
-
----
--
-
TTT
S
AS-------------
-
--
-
-
-
Q
S
DWE
T
R
Q
F
T
L
GK
L
K
L
D
A
A
T
F
Y
L
S
RN
G
Q
M
HGD
I
N
A
V
N
G
S
T
V
I
LG
--
S
DH
VF
T
D
-------
K
N
DG
T
G
NSVSSVE
G
T
A
TATTTV
D
Q
-
S
D
Y
R
G
N
L
T
L
ENK
S
S
L
Q
I
-
R
EK
F
T
GGI
fig|340184.6.peg.4686
Escherichia coli B7A (380-782/1366)
V
N
QGAG
Y
L
Q
F
AND
--
Y
K
V
SAL
--
NGQ
TW
M
G
G
G
V
ITDKGTH
V
L
W
Q
VNGV
A
GDNLHK
L
G
E
GTL
M
VN
-
GTG
V
N
A
GGLKVGDG
T
V
I
LNQQ
L
D
TD
G
KV
QAFSSV
D
I
S
SG
R
PTVVL
SDSR
QVN
P
DN
----
I
S
WG
Y
RGG
R
LDLNGN
NL
TF
T
R
I
Q
AAD
Y
GA
I
I
T
--
N
-
T
SEKK
S
T
V
T
L
DL
Q
SL
KA
S
D
I
NV
P
-
--
INTINF
----
LGGR
GT
P
G
D
L
--
Y
--LVESTGQYY
ILK
ESS
Y
S
PFF
--
SDLNNPNI
W
Q
S
VG
KDRNK
A
IDTVKH
Q
KIE
-
A
S
SQP
Y
M
YHG
Q
L
N
GN
M
D
VNIPQLSG--
---
KDVLTL
DG
SV
N
L
P
E
G
SI
T
K
K
S
G
T
L
IF
QGHP
I
I
HA
G
----
--
-
-
-
-
---------
-
----
--
-
TTT
S
AS-------------
-
--
-
-
-
Q
S
DWE
T
R
Q
F
T
L
GK
L
K
L
D
A
A
T
F
Y
L
S
RN
G
Q
M
HGD
I
N
A
V
N
G
S
T
V
I
LG
--
S
DH
VF
T
D
-------
K
N
DG
T
G
NSVSSVE
G
T
A
TATTTV
D
Q
-
S
D
Y
R
G
N
L
T
L
ENK
S
S
L
Q
I
-
R
EK
F
T
GGI
fig|331111.12.peg.299
Escherichia coli E24377A (377-781/1366)
I
D
QGAG
Y
L
Q
F
FNN
--
Y
T
V
TSL
--
TDQ
TWTG
G
GI
ITEKGVN
V
L
W
Q
VNGV
N
N
DNLHK
V
G
E
GTL
T
VN
-
G
K
G
V
N
N
GGLKVGDG
T
V
I
LNQ
R
P
D
DN
G
HK
QAFSS
I
N
I
S
SG
R
A
TV
I
L
SDAN
QVN
P
D
K
----
I
S
WG
Y
RGG
T
LDLNGN
NV
TF
T
R
L
Q
AAD
Y
GA
I
I
S
NN
N
-
N
NKNK
S
E
L
T
L
KL
Q
TL
NEN
D
IS
V
D
-
--
VKTYEV
----
FGGR
G
S
P
G
D
L
--
Y
--YVSASNTYF
ILK
SKA
YG
PFF
--
SDLDNTNV
W
Q
N
VG
HDRDK
A
IQIVKQ
Q
KIE
-
E
S
SQP
Y
M
F
HG
Q
L
N
G
Y
M
D
VNIHPLSG--
---
KDVLTL
DG
SV
N
L
P
E
G
VI
T
K
K
S
G
T
L
IF
QGHPV
I
HA
G
----
--
-
-
-
-
---------
-
----
--
-
MTT
S
AG-------------
-
--
-
-
-
Q
S
DWENR
Q
F
T
M
DK
L
K
L
D
A
A
T
F
H
L
S
RN
T
R
M
QGD
I
S
A
A
N
G
S
T
V
I
LG
--
S
SR
VF
T
D
-------
K
N
DG
T
G
NAVSSVE
G
S
S
TATTAA
D
Q
-
S
Y
Y
S
G
N
V
L
L
ENH
S
S
L
E
V
-
R
EN
F
T
GGI
fig|405955.9.peg.4271
Escherichia coli APEC O1 (373-790/1377)
V
S
QGAG
S
L
T
F
RDN
--
Y
T
V
TTS
--
NGS
TWTGAGI
VVDNGVS
V
N
W
Q
VNGV
K
GDNLHKIG
E
GTL
T
V
Q
-
GTG
I
N
E
GGLKVGDG
K
VVLNQQ
A
D
NK
G
QV
QAFSSV
N
IASG
R
PTVVL
TDER
QVN
P
D
T
----
V
S
WG
Y
RGG
T
LD
V
NGN
SL
TF
H
Q
L
K
AAD
Y
GA
V
L
A
--
N
-
N
VDKR
A
T
I
T
L
DY
A
LR
--------
-
--
ADKVAL
N
G
WS
ESGK
GT
A
G
N
L
Y
K
Y
NNPYTNTTDYF
ILK
QST
YG
YFP
--
TDQSSNAT
WE
F
VG
HSQGD
A
QKLVAD
R
----
F
N
TAG
Y
L
F
HG
Q
L
K
GN
L
N
VDNRLPEGV-
---
TGALVM
DG
AA
D
I
-
S
G
TF
T
Q
ENG
R
L
TL
QGHPV
I
HA
Y
----
--
-
-
-
-
---------
-
----
--
-
NTQ
S
VADKLAASGDHSVLT
Q
PT
SF
S
Q
E
DWENR
S
F
T
F
DR
L
S
L
K
N
T
D
F
G
L
G
RNA
T
L
NTT
I
Q
A
D
N
-
S
S
V
T
LG
--
D
SR
VFID
-------
K
N
DG
Q
G
TAFTLEE
G
T
S
VATKDA
D
K
-
S
V
F
N
G
T
V
N
L
DNQ
S
V
L
N
I
-
N
DI
F
N
GGI
fig|656419.3.peg.1851
Escherichia coli M718 (373-790/1377)
V
S
QGAG
S
L
T
F
RDN
--
Y
T
V
TTS
--
NGS
TWTGAGI
VVDNGVS
V
N
W
Q
VNGV
K
GDNLHKIG
E
GTL
T
V
Q
-
GTG
I
N
E
GGLKVGDG
K
VVLNQQ
A
D
NK
G
QV
QAFSSV
N
IASG
R
PTVVL
TDER
QVN
P
D
T
----
V
S
WG
Y
RGG
T
LD
V
NGN
SL
TF
H
Q
L
K
AAD
Y
GA
V
L
A
--
N
-
N
VDKR
A
T
I
T
L
DY
A
LR
--------
-
--
ADKVAL
N
G
WS
ESGK
GT
A
G
N
L
Y
K
Y
NNPYTNTTDYF
ILK
QST
YG
YFP
--
TDQSSNAT
WE
F
VG
HSQGD
A
QKLVAD
R
----
F
N
TAG
Y
L
F
HG
Q
L
K
GN
L
N
VDNRLPEGV-
---
TGALVM
DG
AA
D
I
-
S
G
TF
T
Q
ENG
R
L
TL
QGHPV
I
HA
Y
----
--
-
-
-
-
---------
-
----
--
-
NTQ
S
VADKLAASGDHSVLT
Q
PT
SF
S
Q
E
DWENR
S
F
T
F
DR
L
S
L
K
N
T
D
F
G
L
G
RNA
T
L
NTT
I
Q
A
D
N
-
S
S
V
T
LG
--
D
SR
VFID
-------
K
N
DG
Q
G
TAFTLEE
G
T
S
VATKDA
D
K
-
S
V
F
N
G
T
V
N
L
DNQ
S
V
L
N
I
-
N
DI
F
N
GGI
fig|405955.13.peg.5093
Escherichia coli APEC O1 (301-718/1305)
V
S
QGAG
S
L
T
F
RDN
--
Y
T
V
TTS
--
NGS
TWTGAGI
VVDNGVS
V
N
W
Q
VNGV
K
GDNLHKIG
E
GTL
T
V
Q
-
GTG
I
N
E
GGLKVGDG
K
VVLNQQ
A
D
NK
G
QV
QAFSSV
N
IASG
R
PTVVL
TDER
QVN
P
D
T
----
V
S
WG
Y
RGG
T
LD
V
NGN
SL
TF
H
Q
L
K
AAD
Y
GA
V
L
A
--
N
-
N
VDKR
A
T
I
T
L
DY
A
LR
--------
-
--
ADKVAL
N
G
WS
ESGK
GT
A
G
N
L
Y
K
Y
NNPYTNTTDYF
ILK
QST
YG
YFP
--
TDQSSNAT
WE
F
VG
HSQGD
A
QKLVAD
R
----
F
N
TAG
Y
L
F
HG
Q
L
K
GN
L
N
VDNRLPEGV-
---
TGALVM
DG
AA
D
I
-
S
G
TF
T
Q
ENG
R
L
TL
QGHPV
I
HA
Y
----
--
-
-
-
-
---------
-
----
--
-
NTQ
S
VADKLAASGDHSVLT
Q
PT
SF
S
Q
E
DWENR
S
F
T
F
DR
L
S
L
K
N
T
D
F
G
L
G
RNA
T
L
NTT
I
Q
A
D
N
-
S
S
V
T
LG
--
D
SR
VFID
-------
K
N
DG
Q
G
TAFTLEE
G
T
S
VATKDA
D
K
-
S
V
F
N
G
T
V
N
L
DNQ
S
V
L
N
I
-
N
DI
F
N
GGI
fig|199310.1.peg.374
Escherichia coli CFT073 (372-789/1376)
VTQGAG
S
L
T
F
TDD
--
Y
T
V
TTS
--
NGS
TWTGAGI
IVDKDAS
V
N
W
Q
VNGV
K
GDNLHKIG
E
GTL
V
V
Q
-
GTG
V
N
E
GGLKVGDG
T
VVLNQQ
A
D
SS
G
HV
QAFSSV
N
IASG
R
PTVVL
ADNQ
QVN
P
DN
----
I
S
WG
Y
RGG
V
LD
V
NGN
DL
TF
H
KL
N
AAD
Y
GA
T
L
G
--
N
-
S
SDKT
A
N
I
T
L
DY
Q
TR
--------
-
--
PADVKV
NEWS
SSNR
GT
V
G
S
L
YI
Y
NNPYTHTVDYF
ILK
TSS
YG
WFP
--
TGQVSNEH
WE
Y
VG
HDQNS
A
QALLAN
R
----
I
N
NKG
Y
L
YHG
K
L
L
GN
I
N
FSNKATPGT-
---
TGALVM
DG
SA
N
M
-
S
G
TF
T
Q
ENG
R
L
TI
QGHPV
I
HA
S
----
--
-
-
-
-
---------
-
----
--
-
TSQ
S
IANTVSSLGDNSVLT
Q
PT
SF
T
Q
D
DWENR
T
F
S
F
GS
L
V
L
K
D
T
D
F
G
L
G
RNA
T
L
NTT
I
Q
A
D
N
-
S
S
V
T
LG
--
D
SR
VFID
-------
K
K
DG
Q
G
TAFTLEE
G
T
S
VATKDA
D
K
-
S
V
F
N
G
T
V
N
L
DNQ
S
V
L
N
I
-
N
EI
F
N
GGI
fig|749528.3.peg.1421
Escherichia coli MS 45-1 (372-789/1376)
VTQGAG
S
L
T
F
TDD
--
Y
T
V
TTS
--
NGS
TWTGAGI
IVDKDAS
V
N
W
Q
VNGV
K
GDNLHKIG
E
GTL
V
V
Q
-
GTG
V
N
E
GGLKVGDG
T
VVLNQQ
A
D
SS
G
HV
QAFSSV
N
IASG
R
PTVVL
ADNQ
QVN
P
DN
----
I
S
WG
Y
RGG
V
LD
V
NGN
DL
TF
H
KL
N
AAD
Y
GA
T
L
G
--
N
-
S
SDKT
A
N
I
T
L
DY
Q
TR
--------
-
--
PADVKV
NEWS
SSNR
GT
V
G
S
L
YI
Y
NNPYTHTVDYF
ILK
TSS
YG
WFP
--
TGQVSNEH
WE
Y
VG
HDQNS
A
QALLAN
R
----
I
N
NKG
Y
L
YHG
K
L
L
GN
I
N
FSNKATPGT-
---
TGALVM
DG
SA
N
M
-
S
G
TF
T
Q
ENG
R
L
TI
QGHPV
I
HA
S
----
--
-
-
-
-
---------
-
----
--
-
TSQ
S
IANTVSSLGDNSVLT
Q
PT
SF
T
Q
D
DWENR
T
F
S
F
GS
L
V
L
K
D
T
D
F
G
L
G
RNA
T
L
NTT
I
Q
A
D
N
-
S
S
V
T
LG
--
D
SR
VFID
-------
K
K
DG
Q
G
TAFTLEE
G
T
S
VATKDA
D
K
-
S
V
F
N
G
T
V
N
L
DNQ
S
V
L
N
I
-
N
EI
F
N
GGI
fig|753642.3.peg.1353
Escherichia coli NC101 (372-789/1376)
VTQGAG
S
L
T
F
TDD
--
Y
T
V
TTS
--
NGS
TWTGAGI
IVDKDAS
V
N
W
Q
VNGV
K
GDNLHKIG
E
GTL
V
V
Q
-
GTG
V
N
E
GGLKVGDG
T
VVLNQQ
A
D
SS
G
HV
QAFSSV
N
IASG
R
PTVVL
ADNQ
QVN
P
DN
----
I
S
WG
Y
RGG
V
LD
V
NGN
DL
TF
H
KL
N
AAD
Y
GA
T
L
G
--
N
-
S
SDKT
A
N
I
T
L
DY
Q
TR
--------
-
--
PADVKV
NEWS
SSNR
GT
V
G
S
L
YI
Y
NNPYTHTVDYF
ILK
TSS
YG
WFP
--
TGQVSNEH
WE
Y
VG
HDQNS
A
QALLAN
R
----
I
N
NKG
Y
L
YHG
K
L
L
GN
I
N
FSNKATPGT-
---
TGALVM
DG
SA
N
M
-
S
G
TF
T
Q
ENG
R
L
TI
QGHPV
I
HA
S
----
--
-
-
-
-
---------
-
----
--
-
TSQ
S
IANTVSSLGDNSVLT
Q
PT
SF
T
Q
D
DWENR
T
F
S
F
GS
L
V
L
K
D
T
D
F
G
L
G
RNA
T
L
NTT
I
Q
A
D
N
-
S
S
V
T
LG
--
D
SR
VFID
-------
K
K
DG
Q
G
TAFTLEE
G
T
S
VATKDA
D
K
-
S
V
F
N
G
T
V
N
L
DNQ
S
V
L
N
I
-
N
EI
F
N
GGI
fig|869729.3.peg.3412
Escherichia coli UM146 (372-789/1376)
VTQGAG
S
L
T
F
TDD
--
Y
T
V
TTS
--
NGS
TWTGAGI
IVDKDAS
V
N
W
Q
VNGV
K
GDNLHKIG
E
GTL
V
V
Q
-
GTG
V
N
E
GGLKVGDG
T
VVLNQQ
A
D
SS
G
HV
QAFSSV
N
IASG
R
PTVVL
ADNQ
QVN
P
DN
----
I
S
WG
Y
RGG
V
LD
V
NGN
DL
TF
H
KL
N
AAD
Y
GA
T
L
G
--
N
-
S
SDKT
A
N
I
T
L
DY
Q
TR
--------
-
--
PADVKV
NEWS
SSNR
GT
V
G
S
L
YI
Y
NNPYTHTVDYF
ILK
TSS
YG
WFP
--
TGQVSNEH
WE
Y
VG
HDQNS
A
QALLAN
R
----
I
N
NKG
Y
L
YHG
K
L
L
GN
I
N
FSNKATPGT-
---
TGALVM
DG
SA
N
M
-
S
G
TF
T
Q
ENG
R
L
TI
QGHPV
I
HA
S
----
--
-
-
-
-
---------
-
----
--
-
TSQ
S
IANTVSSLGDNSVLT
Q
PT
SF
T
Q
D
DWENR
T
F
S
F
GS
L
V
L
K
D
T
D
F
G
L
G
RNA
T
L
NTT
I
Q
A
D
N
-
S
S
V
T
LG
--
D
SR
VFID
-------
K
K
DG
Q
G
TAFTLEE
G
T
S
VATKDA
D
K
-
S
V
F
N
G
T
V
N
L
DNQ
S
V
L
N
I
-
N
EI
F
N
GGI
fig|405955.9.peg.235
Escherichia coli APEC O1 (372-789/1376)
VTQGAG
S
L
T
F
TDD
--
Y
T
V
TTS
--
NGS
TWTGAGI
IVDKDAS
V
N
W
Q
VNGV
K
GDNLHKIG
E
GTL
V
V
Q
-
GTG
V
N
E
GGLKVGDG
T
VVLNQQ
A
D
SS
G
HV
QAFSSV
N
IASG
R
PTVVL
ADNQ
QVN
P
DN
----
I
S
WG
Y
RGG
V
LD
V
NGN
DL
TF
H
KL
N
AAD
Y
GA
T
L
G
--
N
-
S
SDKT
A
N
I
T
L
DY
Q
TR
--------
-
--
PANVKV
NEWS
SSNR
GT
V
G
S
L
YI
Y
NNPYTHTVDYF
ILK
TSS
YG
WFP
--
TGQVSNEH
WE
Y
VG
HDQNS
A
QALLAN
R
----
I
N
NKG
Y
L
YHG
K
L
L
GN
I
N
FSNKATPGT-
---
TGALVM
DG
SA
N
M
-
S
G
TF
T
Q
ENG
R
L
TI
QGHPV
I
HA
S
----
--
-
-
-
-
---------
-
----
--
-
TSQ
S
IANTVSSLGDNSVLT
Q
PT
SF
T
Q
D
DWENR
T
F
S
F
GS
L
V
L
K
D
T
D
F
G
L
G
RNA
T
L
NTT
I
Q
A
D
N
-
S
S
V
T
LG
--
D
SR
VFID
-------
K
K
DG
Q
G
TAFTLEE
G
T
S
VATKDA
D
K
-
S
V
F
N
G
T
V
N
L
DNQ
S
V
L
N
I
-
N
EI
F
N
GGI
fig|340197.3.peg.1397
Escherichia coli F11 (372-789/1376)
VTQGAG
S
L
T
F
TDD
--
Y
T
V
TTS
--
NGS
TWTGAGI
IVDKDAS
V
N
W
Q
VNGV
K
GDNLHKIG
E
GTL
V
V
Q
-
GTG
V
N
E
GGLKVGDG
T
VVLNQQ
A
D
SS
G
HV
QAFSSV
N
IASG
R
PTVVL
ADNQ
QVN
P
DN
----
I
S
WG
Y
RGG
V
LD
V
NGN
DL
TF
H
KL
N
AAD
Y
GA
T
L
G
--
N
-
S
SDKT
A
N
I
T
L
DY
Q
TH
--------
-
--
PADVKV
NEWS
SSNR
GT
V
G
S
L
YI
Y
NNPYTHTVDYF
ILK
TSS
YG
WFP
--
TGQVSNEH
WE
Y
VG
HDQNS
A
QALLAN
R
----
I
N
NKG
Y
L
YHG
K
L
L
GN
I
N
FSNKATPGT-
---
TGALVM
DG
SA
N
M
-
S
G
TF
T
Q
ENG
R
L
TI
QGHPV
I
HA
S
----
--
-
-
-
-
---------
-
----
--
-
TSQ
S
IANTVSSLGDNSVLT
Q
PT
SF
T
Q
D
DWENR
T
F
S
F
GS
L
V
L
K
D
T
D
F
G
L
G
RNA
T
L
NTT
I
Q
A
D
N
-
S
S
V
T
LG
--
D
SR
VFID
-------
K
K
DG
Q
G
TAFTLEE
G
T
S
VATKDA
D
K
-
S
V
F
N
G
T
V
N
L
DNQ
S
V
L
N
I
-
N
DI
F
N
GGI
fig|656440.3.peg.153
Escherichia coli TA206 (372-789/1376)
VTQGAG
S
L
T
F
TDD
--
Y
T
V
TTS
--
NGS
TWTGAGI
IVDKDAS
V
N
W
Q
VNGV
K
GDNLHKIG
E
GTL
V
V
Q
-
GTG
V
N
E
GGLKVGDG
T
VVLNQQ
A
D
SS
G
HV
QAFSSV
N
IASG
R
PTVVL
ADNQ
QVN
P
DN
----
I
S
WG
Y
RGG
V
LD
V
NGN
DL
TF
H
KL
N
AAD
Y
GA
T
L
G
--
N
-
S
SDKT
A
N
I
T
L
DY
Q
TH
--------
-
--
PADVKV
NEWS
SSNR
GT
V
G
S
L
YI
Y
NNPYTHTVDYF
ILK
TSS
YG
WFP
--
TGQVSNEH
WE
Y
VG
HDQNS
A
QALLAN
R
----
I
N
NKG
Y
L
YHG
K
L
L
GN
I
N
FSNKATPGT-
---
TGALVM
DG
SA
N
M
-
S
G
TF
T
Q
ENG
R
L
TI
QGHPV
I
HA
S
----
--
-
-
-
-
---------
-
----
--
-
TSQ
S
IANTVSSLGDNSVLT
Q
PT
SF
T
Q
D
DWENR
T
F
S
F
GS
L
V
L
K
D
T
D
F
G
L
G
RNA
T
L
NTT
I
Q
A
D
N
-
S
S
V
T
LG
--
D
SR
VFID
-------
K
K
DG
Q
G
TAFTLEE
G
T
S
VATKDA
D
K
-
S
V
F
N
G
T
V
N
L
DNQ
S
V
L
N
I
-
N
DI
F
N
GGI
fig|550676.3.peg.2951
Escherichia coli B185 (373-792/1299)
V
S
QGAG
S
L
T
F
RDN
--
Y
T
V
TTS
--
NGS
TWTGAGI
IVDNGVS
V
N
W
Q
VNGV
K
GDNLHKIG
E
GTL
T
V
Q
-
GTG
I
N
E
GGLKVGDG
K
VVLNQQ
A
D
NK
G
QV
QAFSSV
N
IASG
R
PTVVL
TDER
QVN
P
D
T
----
V
S
WG
Y
RGG
T
LD
V
NGN
SL
TF
H
Q
L
K
AAD
Y
GA
V
L
A
--
N
-
N
ADKR
A
T
I
T
L
DY
A
LR
--------
-
--
ADKVAL
N
G
WS
ESRK
GT
A
G
N
L
Y
K
Y
NNPYTNTTDYF
ILK
QST
YG
YFP
--
TDQSSNAT
WE
F
VG
HSQGD
A
QKLVAD
R
----
F
N
AAG
Y
L
F
HG
Q
L
K
D
N
L
N
VDNRLPEGV-
---
TGALVM
DG
SA
D
I
-
S
G
TF
T
Q
ENG
R
L
TL
QGHPV
I
HA
Y
----
--
-
-
-
-
---------
-
----
--
-
NTQ
S
VADKLAASGDHSVLT
Q
PT
SF
S
Q
E
DWENR
S
F
T
F
DR
L
S
L
K
N
T
D
F
G
L
G
RNA
T
L
NTM
L
E
A
T
D
-
S
T
V
T
LG
--
D
RR
VFID
-------
K
N
DG
N
G
TAFVLEE
G
T
S
EAVKDA
D
R
-
S
V
F
N
G
S
A
V
L
NGK
T
T
L
D
I
M
N
AT
F
N
G
D
I
S
fig|655817.3.peg.394
Escherichia coli ABU 83972 (84-501/1088)
VTQGAG
S
L
T
F
TDD
--
Y
T
V
TTS
--
NGS
TWTGAGI
IVDKDAS
V
N
W
Q
VNGV
K
GDNLHKIG
E
GTL
V
V
Q
-
GTG
V
N
E
GGLKVGDG
T
VVLNQQ
A
D
SS
G
HV
QAFSSV
N
IASG
R
PTVVL
ADNQ
QVN
P
DN
----
I
S
WG
Y
RGG
V
LD
V
NGN
DL
TF
H
KL
N
AAD
Y
GA
T
L
G
--
N
-
S
SDKT
A
N
I
T
L
DY
Q
TR
--------
-
--
PADVKV
NEWS
SSNR
GT
V
G
S
L
YI
Y
NNPYTHTVDYF
ILK
TSS
YG
WFP
--
TGQVSNEH
WE
Y
VG
HDQNS
A
QALLAN
R
----
I
N
NKG
Y
L
YHG
K
L
L
GN
I
N
FSNKATPGT-
---
TGALVM
DG
SA
N
M
-
S
G
TF
T
Q
ENG
R
L
TI
QGHPV
I
HA
S
----
--
-
-
-
-
---------
-
----
--
-
TSQ
S
IANTVSSLGDNSVLT
Q
PT
SF
T
Q
D
DWENR
T
F
S
F
GS
L
V
L
K
D
T
D
F
G
L
G
RNA
T
L
NTT
I
Q
A
D
N
-
S
S
V
T
LG
--
D
SR
VFID
-------
K
K
DG
Q
G
TAFTLEE
G
T
S
VATKDA
D
K
-
S
V
F
N
G
T
V
N
L
DNQ
S
V
L
N
I
-
N
EI
F
N
GGI
fig|656393.3.peg.911
Escherichia coli H299 (84-501/1088)
VTQGAG
S
L
T
F
TDD
--
Y
T
V
TTS
--
NGS
TWTGAGI
IVDKDAS
V
N
W
Q
VNGV
K
GDNLHKIG
E
GTL
V
V
Q
-
GTG
V
N
E
GGLKVGDG
T
VVLNQQ
A
D
SS
G
HV
QAFSSV
N
IASG
R
PTVVL
ADNQ
QVN
P
DN
----
I
S
WG
Y
RGG
V
LD
V
NGN
DL
TF
H
KL
N
AAD
Y
GA
T
L
G
--
N
-
S
SDKT
A
N
I
T
L
DY
Q
TR
--------
-
--
PADVKV
NEWS
SSNR
GT
V
G
S
L
YI
Y
NNPYTHTVDYF
ILK
TSS
YG
WFP
--
TGQVSNEH
WE
Y
VG
HDQNS
A
QALLAN
R
----
I
N
NKG
Y
L
YHG
K
L
L
GN
I
N
FSNKATPGT-
---
TGALVM
DG
SA
N
M
-
S
G
TF
T
Q
ENG
R
L
TI
QGHPV
I
HA
S
----
--
-
-
-
-
---------
-
----
--
-
TSQ
S
IANTVSSLGDNSVLT
Q
PT
SF
T
Q
D
DWENR
T
F
S
F
GS
L
V
L
K
D
T
D
F
G
L
G
RNA
T
L
NTT
I
Q
A
D
N
-
S
S
V
T
LG
--
D
SR
VFID
-------
K
K
DG
Q
G
TAFTLEE
G
T
S
VATKDA
D
K
-
S
V
F
N
G
T
V
N
L
DNQ
S
V
L
N
I
-
N
EI
F
N
GGI
fig|525281.3.peg.2621
Escherichia coli 83972 (30-447/1034)
VTQGAG
S
L
T
F
TDD
--
Y
T
V
TTS
--
NGS
TWTGAGI
IVDKDAS
V
N
W
Q
VNGV
K
GDNLHKIG
E
GTL
V
V
Q
-
GTG
V
N
E
GGLKVGDG
T
VVLNQQ
A
D
SS
G
HV
QAFSSV
N
IASG
R
PTVVL
ADNQ
QVN
P
DN
----
I
S
WG
Y
RGG
V
LD
V
NGN
DL
TF
H
KL
N
AAD
Y
GA
T
L
G
--
N
-
S
SDKT
A
N
I
T
L
DY
Q
TR
--------
-
--
PADVKV
NEWS
SSNR
GT
V
G
S
L
YI
Y
NNPYTHTVDYF
ILK
TSS
YG
WFP
--
TGQVSNEH
WE
Y
VG
HDQNS
A
QALLAN
R
----
I
N
NKG
Y
L
YHG
K
L
L
GN
I
N
FSNKATPGT-
---
TGALVM
DG
SA
N
M
-
S
G
TF
T
Q
ENG
R
L
TI
QGHPV
I
HA
S
----
--
-
-
-
-
---------
-
----
--
-
TSQ
S
IANTVSSLGDNSVLT
Q
PT
SF
T
Q
D
DWENR
T
F
S
F
GS
L
V
L
K
D
T
D
F
G
L
G
RNA
T
L
NTT
I
Q
A
D
N
-
S
S
V
T
LG
--
D
SR
VFID
-------
K
K
DG
Q
G
TAFTLEE
G
T
S
VATKDA
D
K
-
S
V
F
N
G
T
V
N
L
DNQ
S
V
L
N
I
-
N
EI
F
N
GGI
fig|199310.4.peg.364
Escherichia coli CFT073 (30-447/1034)
VTQGAG
S
L
T
F
TDD
--
Y
T
V
TTS
--
NGS
TWTGAGI
IVDKDAS
V
N
W
Q
VNGV
K
GDNLHKIG
E
GTL
V
V
Q
-
GTG
V
N
E
GGLKVGDG
T
VVLNQQ
A
D
SS
G
HV
QAFSSV
N
IASG
R
PTVVL
ADNQ
QVN
P
DN
----
I
S
WG
Y
RGG
V
LD
V
NGN
DL
TF
H
KL
N
AAD
Y
GA
T
L
G
--
N
-
S
SDKT
A
N
I
T
L
DY
Q
TR
--------
-
--
PADVKV
NEWS
SSNR
GT
V
G
S
L
YI
Y
NNPYTHTVDYF
ILK
TSS
YG
WFP
--
TGQVSNEH
WE
Y
VG
HDQNS
A
QALLAN
R
----
I
N
NKG
Y
L
YHG
K
L
L
GN
I
N
FSNKATPGT-
---
TGALVM
DG
SA
N
M
-
S
G
TF
T
Q
ENG
R
L
TI
QGHPV
I
HA
S
----
--
-
-
-
-
---------
-
----
--
-
TSQ
S
IANTVSSLGDNSVLT
Q
PT
SF
T
Q
D
DWENR
T
F
S
F
GS
L
V
L
K
D
T
D
F
G
L
G
RNA
T
L
NTT
I
Q
A
D
N
-
S
S
V
T
LG
--
D
SR
VFID
-------
K
K
DG
Q
G
TAFTLEE
G
T
S
VATKDA
D
K
-
S
V
F
N
G
T
V
N
L
DNQ
S
V
L
N
I
-
N
EI
F
N
GGI
fig|685038.3.peg.266
Escherichia coli O83:H1 str. NRG 857C (30-447/1034)
VTQGAG
S
L
T
F
TDD
--
Y
T
V
TTS
--
NGS
TWTGAGI
IVDKDAS
V
N
W
Q
VNGV
K
GDNLHKIG
E
GTL
V
V
Q
-
GTG
V
N
E
GGLKVGDG
T
VVLNQQ
A
D
SS
G
HV
QAFSSV
N
IASG
R
PTVVL
ADNQ
QVN
P
DN
----
I
S
WG
Y
RGG
V
LD
V
NGN
DL
TF
H
KL
N
AAD
Y
GA
T
L
G
--
N
-
S
SDKT
A
N
I
T
L
DY
Q
TR
--------
-
--
PADVKV
NEWS
SSNR
GT
V
G
S
L
YI
Y
NNPYTHTVDYF
ILK
TSS
YG
WFP
--
TGQVSNEH
WE
Y
VG
HDQNS
A
QALLAN
R
----
I
N
NKG
Y
L
YHG
K
L
L
GN
I
N
FSNKATPGT-
---
TGALVM
DG
SA
N
M
-
S
G
TF
T
Q
ENG
R
L
TI
QGHPV
I
HA
S
----
--
-
-
-
-
---------
-
----
--
-
TSQ
S
IANTVSSLGDNSVLT
Q
PT
SF
T
Q
D
DWENR
T
F
S
F
GS
L
V
L
K
D
T
D
F
G
L
G
RNA
T
L
NTT
I
Q
A
D
N
-
S
S
V
T
LG
--
D
SR
VFID
-------
K
K
DG
Q
G
TAFTLEE
G
T
S
VATKDA
D
K
-
S
V
F
N
G
T
V
N
L
DNQ
S
V
L
N
I
-
N
EI
F
N
GGI
fig|714962.3.peg.271
Escherichia coli IHE3034 (30-447/1034)
VTQGAG
S
L
T
F
TDD
--
Y
T
V
TTS
--
NGS
TWTGAGI
IVDKDAS
V
N
W
Q
VNGV
K
GDNLHKIG
E
GTL
V
V
Q
-
GTG
V
N
E
GGLKVGDG
T
VVLNQQ
A
D
SS
G
HV
QAFSSV
N
IASG
R
PTVVL
ADNQ
QVN
P
DN
----
I
S
WG
Y
RGG
V
LD
V
NGN
DL
TF
H
KL
N
AAD
Y
GA
T
L
G
--
N
-
S
SDKT
A
N
I
T
L
DY
Q
TR
--------
-
--
PADVKV
NEWS
SSNR
GT
V
G
S
L
YI
Y
NNPYTHTVDYF
ILK
TSS
YG
WFP
--
TGQVSNEH
WE
Y
VG
HDQNS
A
QALLAN
R
----
I
N
NKG
Y
L
YHG
K
L
L
GN
I
N
FSNKATPGT-
---
TGALVM
DG
SA
N
M
-
S
G
TF
T
Q
ENG
R
L
TI
QGHPV
I
HA
S
----
--
-
-
-
-
---------
-
----
--
-
TSQ
S
IANTVSSLGDNSVLT
Q
PT
SF
T
Q
D
DWENR
T
F
S
F
GS
L
V
L
K
D
T
D
F
G
L
G
RNA
T
L
NTT
I
Q
A
D
N
-
S
S
V
T
LG
--
D
SR
VFID
-------
K
K
DG
Q
G
TAFTLEE
G
T
S
VATKDA
D
K
-
S
V
F
N
G
T
V
N
L
DNQ
S
V
L
N
I
-
N
EI
F
N
GGI
fig|656417.3.peg.411
Escherichia coli M605 (30-447/1034)
VTQGAG
S
L
T
F
TDD
--
Y
T
V
TTS
--
NGS
TWTGAGI
IVDKDAS
V
N
W
Q
VNGV
K
GDNLHKIG
E
GTL
V
V
Q
-
GTG
V
N
E
GGLKVGDG
T
VVLNQQ
A
D
SS
G
HV
QAFSSV
N
IASG
R
PTVVL
ADNQ
QVN
P
DN
----
I
S
WG
Y
RGG
V
LD
V
NGN
DL
TF
H
KL
N
AAD
Y
GA
T
L
G
--
N
-
S
SDKT
A
N
I
T
L
DY
Q
TR
--------
-
--
PADVKV
NEWS
SSNR
GT
V
G
S
L
YI
Y
NNPYTHTVDYF
ILK
TSS
YG
WFP
--
TGQVSNEH
WE
Y
VG
HDQNS
A
QALLAN
R
----
I
N
NKG
Y
L
YHG
K
L
L
GN
I
N
FSNKATPGT-
---
TGALVM
DG
SA
N
M
-
S
G
TF
T
Q
ENG
R
L
TI
QGHPV
I
HA
S
----
--
-
-
-
-
---------
-
----
--
-
TSQ
S
IANTVSSLGDNSVLT
Q
PT
SF
T
Q
D
DWENR
T
F
S
F
GS
L
V
L
K
D
T
D
F
G
L
G
RNA
T
L
NTT
I
Q
A
D
N
-
S
S
V
T
LG
--
D
SR
VFID
-------
K
K
DG
Q
G
TAFTLEE
G
T
S
VATKDA
D
K
-
S
V
F
N
G
T
V
N
L
DNQ
S
V
L
N
I
-
N
EI
F
N
GGI
fig|405955.13.peg.282
Escherichia coli APEC O1 (30-447/1034)
VTQGAG
S
L
T
F
TDD
--
Y
T
V
TTS
--
NGS
TWTGAGI
IVDKDAS
V
N
W
Q
VNGV
K
GDNLHKIG
E
GTL
V
V
Q
-
GTG
V
N
E
GGLKVGDG
T
VVLNQQ
A
D
SS
G
HV
QAFSSV
N
IASG
R
PTVVL
ADNQ
QVN
P
DN
----
I
S
WG
Y
RGG
V
LD
V
NGN
DL
TF
H
KL
N
AAD
Y
GA
T
L
G
--
N
-
S
SDKT
A
N
I
T
L
DY
Q
TR
--------
-
--
PANVKV
NEWS
SSNR
GT
V
G
S
L
YI
Y
NNPYTHTVDYF
ILK
TSS
YG
WFP
--
TGQVSNEH
WE
Y
VG
HDQNS
A
QALLAN
R
----
I
N
NKG
Y
L
YHG
K
L
L
GN
I
N
FSNKATPGT-
---
TGALVM
DG
SA
N
M
-
S
G
TF
T
Q
ENG
R
L
TI
QGHPV
I
HA
S
----
--
-
-
-
-
---------
-
----
--
-
TSQ
S
IANTVSSLGDNSVLT
Q
PT
SF
T
Q
D
DWENR
T
F
S
F
GS
L
V
L
K
D
T
D
F
G
L
G
RNA
T
L
NTT
I
Q
A
D
N
-
S
S
V
T
LG
--
D
SR
VFID
-------
K
K
DG
Q
G
TAFTLEE
G
T
S
VATKDA
D
K
-
S
V
F
N
G
T
V
N
L
DNQ
S
V
L
N
I
-
N
EI
F
N
GGI
fig|585035.6.peg.274
Escherichia coli S88 (30-447/1034)
VTQGAG
S
L
T
F
TDD
--
Y
T
V
TTS
--
NGS
TWTGAGI
IVDKDAS
V
N
W
Q
VNGV
K
GDNLHKIG
E
GTL
V
V
Q
-
GTG
V
N
E
GGLKVGDG
T
VVLNQQ
A
D
SS
G
HV
QAFSSV
N
IASG
R
PTVVL
ADNQ
QVN
P
DN
----
I
S
WG
Y
RGG
V
LD
V
NGN
DL
TF
H
KL
N
AAD
Y
GA
T
L
G
--
N
-
S
SDKT
A
N
I
T
L
DY
Q
TR
--------
-
--
PANVKV
NEWS
SSNR
GT
V
G
S
L
YI
Y
NNPYTHTVDYF
ILK
TSS
YG
WFP
--
TGQVSNEH
WE
Y
VG
HDQNS
A
QALLAN
R
----
I
N
NKG
Y
L
YHG
K
L
L
GN
I
N
FSNKATPGT-
---
TGALVM
DG
SA
N
M
-
S
G
TF
T
Q
ENG
R
L
TI
QGHPV
I
HA
S
----
--
-
-
-
-
---------
-
----
--
-
TSQ
S
IANTVSSLGDNSVLT
Q
PT
SF
T
Q
D
DWENR
T
F
S
F
GS
L
V
L
K
D
T
D
F
G
L
G
RNA
T
L
NTT
I
Q
A
D
N
-
S
S
V
T
LG
--
D
SR
VFID
-------
K
K
DG
Q
G
TAFTLEE
G
T
S
VATKDA
D
K
-
S
V
F
N
G
T
V
N
L
DNQ
S
V
L
N
I
-
N
EI
F
N
GGI
fig|362663.8.peg.342
Escherichia coli 536 (30-447/1034)
VTQGAG
S
L
T
F
TDD
--
Y
T
V
TTS
--
NGS
TWTGAGI
IVDKDAS
V
N
W
Q
VNGV
K
GDNLHKIG
E
GTL
V
V
Q
-
GTG
V
N
E
GGLKVGDG
T
VVLNQQ
A
D
SS
G
HV
QAFSSV
N
IASG
R
PTVVL
ADNQ
QVN
P
DN
----
I
S
WG
Y
RGG
V
LD
V
NGN
DL
TF
H
KL
N
AAD
Y
GA
T
L
G
--
N
-
S
SDKT
A
N
I
T
L
DY
Q
TH
--------
-
--
PADVKV
NEWS
SSNR
GT
V
G
S
L
YI
Y
NNPYTHTVDYF
ILK
TSS
YG
WFP
--
TGQVSNEH
WE
Y
VG
HDQNS
A
QALLAN
R
----
I
N
NKG
Y
L
YHG
K
L
L
GN
I
N
FSNKATPGT-
---
TGALVM
DG
SA
N
M
-
S
G
TF
T
Q
ENG
R
L
TI
QGHPV
I
HA
S
----
--
-
-
-
-
---------
-
----
--
-
TSQ
S
IANTVSSLGDNSVLT
Q
PT
SF
T
Q
D
DWENR
T
F
S
F
GS
L
V
L
K
D
T
D
F
G
L
G
RNA
T
L
NTT
I
Q
A
D
N
-
S
S
V
T
LG
--
D
SR
VFID
-------
K
K
DG
Q
G
TAFTLEE
G
T
S
VATKDA
D
K
-
S
V
F
N
G
T
V
N
L
DNQ
S
V
L
N
I
-
N
DI
F
N
GGI
fig|362663.9.peg.341
Escherichia coli 536 (30-447/1034)
VTQGAG
S
L
T
F
TDD
--
Y
T
V
TTS
--
NGS
TWTGAGI
IVDKDAS
V
N
W
Q
VNGV
K
GDNLHKIG
E
GTL
V
V
Q
-
GTG
V
N
E
GGLKVGDG
T
VVLNQQ
A
D
SS
G
HV
QAFSSV
N
IASG
R
PTVVL
ADNQ
QVN
P
DN
----
I
S
WG
Y
RGG
V
LD
V
NGN
DL
TF
H
KL
N
AAD
Y
GA
T
L
G
--
N
-
S
SDKT
A
N
I
T
L
DY
Q
TH
--------
-
--
PADVKV
NEWS
SSNR
GT
V
G
S
L
YI
Y
NNPYTHTVDYF
ILK
TSS
YG
WFP
--
TGQVSNEH
WE
Y
VG
HDQNS
A
QALLAN
R
----
I
N
NKG
Y
L
YHG
K
L
L
GN
I
N
FSNKATPGT-
---
TGALVM
DG
SA
N
M
-
S
G
TF
T
Q
ENG
R
L
TI
QGHPV
I
HA
S
----
--
-
-
-
-
---------
-
----
--
-
TSQ
S
IANTVSSLGDNSVLT
Q
PT
SF
T
Q
D
DWENR
T
F
S
F
GS
L
V
L
K
D
T
D
F
G
L
G
RNA
T
L
NTT
I
Q
A
D
N
-
S
S
V
T
LG
--
D
SR
VFID
-------
K
K
DG
Q
G
TAFTLEE
G
T
S
VATKDA
D
K
-
S
V
F
N
G
T
V
N
L
DNQ
S
V
L
N
I
-
N
DI
F
N
GGI
fig|340197.5.peg.1477
Escherichia coli F11 (30-447/1034)
VTQGAG
S
L
T
F
TDD
--
Y
T
V
TTS
--
NGS
TWTGAGI
IVDKDAS
V
N
W
Q
VNGV
K
GDNLHKIG
E
GTL
V
V
Q
-
GTG
V
N
E
GGLKVGDG
T
VVLNQQ
A
D
SS
G
HV
QAFSSV
N
IASG
R
PTVVL
ADNQ
QVN
P
DN
----
I
S
WG
Y
RGG
V
LD
V
NGN
DL
TF
H
KL
N
AAD
Y
GA
T
L
G
--
N
-
S
SDKT
A
N
I
T
L
DY
Q
TH
--------
-
--
PADVKV
NEWS
SSNR
GT
V
G
S
L
YI
Y
NNPYTHTVDYF
ILK
TSS
YG
WFP
--
TGQVSNEH
WE
Y
VG
HDQNS
A
QALLAN
R
----
I
N
NKG
Y
L
YHG
K
L
L
GN
I
N
FSNKATPGT-
---
TGALVM
DG
SA
N
M
-
S
G
TF
T
Q
ENG
R
L
TI
QGHPV
I
HA
S
----
--
-
-
-
-
---------
-
----
--
-
TSQ
S
IANTVSSLGDNSVLT
Q
PT
SF
T
Q
D
DWENR
T
F
S
F
GS
L
V
L
K
D
T
D
F
G
L
G
RNA
T
L
NTT
I
Q
A
D
N
-
S
S
V
T
LG
--
D
SR
VFID
-------
K
K
DG
Q
G
TAFTLEE
G
T
S
VATKDA
D
K
-
S
V
F
N
G
T
V
N
L
DNQ
S
V
L
N
I
-
N
DI
F
N
GGI
fig|749550.3.peg.957
Escherichia coli MS 200-1 (30-447/1034)
VTQGAG
S
L
T
F
TDD
--
Y
T
V
TTS
--
NGS
TWTGAGI
IVDKDAS
V
N
W
Q
VNGV
K
GDNLHKIG
E
GTL
V
V
Q
-
GTG
V
N
E
GGLKVGDG
T
VVLNQQ
A
D
SS
G
HV
QAFSSV
N
IASG
R
PTVVL
ADNQ
QVN
P
DN
----
I
S
WG
Y
RGG
V
LD
V
NGN
DL
TF
H
KL
N
AAD
Y
GA
T
L
G
--
N
-
S
SDKT
A
N
I
T
L
DY
Q
TH
--------
-
--
PADVKV
NEWS
SSNR
GT
V
G
S
L
YI
Y
NNPYTHTVDYF
ILK
TSS
YG
WFP
--
TGQVSNEH
WE
Y
VG
HDQNS
A
QALLAN
R
----
I
N
NKG
Y
L
YHG
K
L
L
GN
I
N
FSNKATPGT-
---
TGALVM
DG
SA
N
M
-
S
G
TF
T
Q
ENG
R
L
TI
QGHPV
I
HA
S
----
--
-
-
-
-
---------
-
----
--
-
TSQ
S
IANTVSSLGDNSVLT
Q
PT
SF
T
Q
D
DWENR
T
F
S
F
GS
L
V
L
K
D
T
D
F
G
L
G
RNA
T
L
NTT
I
Q
A
D
N
-
S
S
V
T
LG
--
D
SR
VFID
-------
K
K
DG
Q
G
TAFTLEE
G
T
S
VATKDA
D
K
-
S
V
F
N
G
T
V
N
L
DNQ
S
V
L
N
I
-
N
DI
F
N
GGI
fig|585395.4.peg.3978
Escherichia coli O103:H2 str. 12009 (337-737/1329)
QGAG
Y
L
Q
F
DKD
--
Y
T
V
LTN
--
NNS
TWTGAGI
IVGDEAN
V
K
W
G
VNG
I
A
GDNLHK
V
G
S
GTL
T
VN
-
G
H
G
E
N
K
GGLKVGDG
V
VVL
E
QQ
P
D
AN
Q
KQ
QAFS
H
I
N
IASG
R
A
TV
K
L
NGAN
QV
D
A
DN
----
I
S
WG
Y
RGG
K
LDLNG
Y
DF
TF
S
R
L
Q
AAD
Y
GA
E
I
S
--
N
D
N
QTDK
S
I
V
T
L
SL
S
PL
KA
EEI
NV
V
-
--
VNNINI
----
MGGT
G
K
P
G
D
L
--
Y
YTTFDG--NYY
L
LK
SNR
YG
SAL
F
G
A-LNNQSE
W
Q
R
L
G
KDKEK
A
IGLYTQ
MKMQE
S
A
PLS
YIYHG
K
I
T
GN
T
S
VEIPKLAG--
---
NDILTL
DG
SV
S
I
-
S
G
DM
S
K
QD
G
A
L
IF
QGHPV
I
HA
G
----
--
-
-
-
-
---------
-
----
--
-
QTV
S
AS-------------
-
--
-
-
-
Q
S
DWENR
E
F
S
L
NN
L
N
L
N
N
V
D
F
S
L
S
RNA
F
M
NGN
I
R
A
V
N
Q
S
T
V
I
I
G
--
G
DT
VF
T
D
-------
K
N
DG
T
G
NDVISVE
G
K
S
AASGT-
-
-
-
S
S
Y
T
G
H
I
T
L
EQK
S
A
L
D
I
-
R
DN
F
R
GG
V
T
fig|656393.3.peg.73
Escherichia coli H299 (331-737/1329)
V
N
QGAG
Y
L
Q
F
ADD
--
Y
T
V
TTS
--
NDS
S
W
S
G
G
GI
IVNYGTT
V
K
W
G
I
NGV
S
GD
D
LHK
V
G
D
GTL
I
I
N
-
GTG
K
N
E
GGLK
I
G
A
G
T
V
I
L
E
Q
K
A
-
KN
N
DS
T
AFSS
I
N
I
S
G
G
N
SR
V
K
L
SGDN
Q
I
I
P
DN
----
V
S
WG
F
RGG
Y
LD
I
NG
K
NT
E
F
S
R
L
Q
A
V
D
Y
GA
A
I
I
--
N
-
S
STDK
S
L
L
T
L
NL
S
PL
K
KDEIA
VS
-
--
VKALDM
N
AIF
QGGH
GT
A
G
D
L
--
Y
KTTFYGPTQYY
L
LK
KPK
F
G
SVL
M
G
S-LKNTSE
W
Q
F
A
G
TDLNQ
A
VDMAKN
NK
L
TS
S
A
QAS
Y
L
YHG
K
L
L
GN
M
D
IVIPELTG--
---
NDILTL
DG
SV
S
I
-
S
G
DM
S
K
QD
G
A
L
IF
QGHPV
I
HA
G
----
--
-
-
-
-
---------
-
----
--
-
QTV
S
AS-------------
-
--
-
-
-
Q
S
DWENR
E
F
S
L
NN
L
N
L
N
N
A
D
F
S
L
S
RNA
F
M
NGN
I
R
A
V
N
Q
S
T
V
I
I
G
--
G
DT
VF
T
D
-------
K
N
DG
T
G
NDVISVE
G
K
S
AAAGT-
-
-
-
S
S
Y
T
G
H
I
T
L
EQK
S
A
L
D
I
-
R
DN
F
R
GG
V
T
fig|340185.3.peg.3806
Escherichia coli E22 (379-724/1290)
QGAG
T
L
T
F
DAN
--
Y
T
V
SPS
--
TNE
TW
K
G
G
GI
IVNDDHT
V
D
W
Q
VNGV
K
GDNLHK
L
G
T
GTL
K
VN
-
GTG
V
N
P
GGL
N
VG
E
G
T
V
I
L
A
Q
R
P
D
SD
G
NV
QAF
N
I
V
D
I
V
SG
R
PTVVL
SDDK
QVN
P
DN
----
I
I
W
D
Y
RGG
K
LD
I
NGN
SL
TF
H
Q
L
N
G
AD
D
GA
I
L
T
--
N
-
S
G-KQ
A
T
V
N
L
DF
-
--
--------
-
--
------
----
----
--
-
-
-
-
--
-
-----------
---
---
--
---
--
--------
--
-
--
-NKPN
A
TTTVAN
-
----
-
-
---
-
I
W
HG
H
F
T
GN
V
D
VSNAATTST-
---
QNDFVM
DG
GM
N
I
-
Q
G
SF
T
Q
Q
NG
R
L
FI
QGHPV
I
HA
A
----
--
-
-
-
-
---------
-
----
--
-
SSQ
A
VANKLKTFGDNSVLT
Q
PV
SF
T
Q
S
DWENR
Q
F
S
M
TQ
L
N
L
N
N
A
D
F
S
L
A
RNA
S
L
STL
I
N
A
D
H
-
S
T
V
T
LG
--
S
EN
L
Y
ID
-------
L
N
DG
N
G
AKTTPSF
G
Q
S
KATNAA
D
Q
-
S
R
F
S
G
R
V
Q
L
KNG
S
T
L
N
I
-
N
EH
F
V
GGI
fig|340185.4.peg.4006
Escherichia coli E22 (333-678/1244)
QGAG
T
L
T
F
DAN
--
Y
T
V
SPS
--
TNE
TW
K
G
G
GI
IVNDDHT
V
D
W
Q
VNGV
K
GDNLHK
L
G
T
GTL
K
VN
-
GTG
V
N
P
GGL
N
VG
E
G
T
V
I
L
A
Q
R
P
D
SD
G
NV
QAF
N
I
V
D
I
V
SG
R
PTVVL
SDDK
QVN
P
DN
----
I
I
W
D
Y
RGG
K
LD
I
NGN
SL
TF
H
Q
L
N
G
AD
D
GA
I
L
T
--
N
-
S
G-KQ
A
T
V
N
L
DF
-
--
--------
-
--
------
----
----
--
-
-
-
-
--
-
-----------
---
---
--
---
--
--------
--
-
--
-NKPN
A
TTTVAN
-
----
-
-
---
-
I
W
HG
H
F
T
GN
V
D
VSNAATTST-
---
QNDFVM
DG
GM
N
I
-
Q
G
SF
T
Q
Q
NG
R
L
FI
QGHPV
I
HA
A
----
--
-
-
-
-
---------
-
----
--
-
SSQ
A
VANKLKTFGDNSVLT
Q
PV
SF
T
Q
S
DWENR
Q
F
S
M
TQ
L
N
L
N
N
A
D
F
S
L
A
RNA
S
L
STL
I
N
A
D
H
-
S
T
V
T
LG
--
S
EN
L
Y
ID
-------
L
N
DG
N
G
AKTTPSF
G
Q
S
KATNAA
D
Q
-
S
R
F
S
G
R
V
Q
L
KNG
S
T
L
N
I
-
N
EH
F
V
GGI
fig|550672.3.peg.4213
Escherichia coli B088 (371-716/1281)
QGAG
T
L
T
F
NDD
--
Y
S
I
KPL
--
DSQ
TW
K
G
G
GI
IINGDSI
V
D
W
Q
VNGV
Q
GDNLHK
L
G
T
GTL
K
VN
-
GTG
I
N
P
GGL
N
VG
E
G
T
V
I
L
A
Q
R
P
D
SN
G
NV
QAF
N
N
V
S
I
V
SG
R
PTVVL
SDAK
QVN
P
DN
----
V
K
WG
Y
RGG
K
LD
I
NGN
NL
TF
H
KL
N
G
AD
E
GA
V
L
T
--
N
-
S
G-SL
A
S
V
N
L
DF
-
--
--------
-
--
------
----
----
--
-
-
-
-
--
-
-----------
---
---
--
---
--
--------
--
-
--
-NKAD
A
TTAVAN
-
----
-
-
---
-
I
W
HG
H
F
T
GN
I
D
INNTVTPGT-
---
QNDFVM
DG
GV
D
T
-
Q
G
SF
T
Q
ENG
R
L
FI
QGHPV
I
HA
V
----
--
-
-
-
-
---------
-
----
--
-
STQ
A
VADKLKTLGDNSVLT
Q
PV
SF
T
Q
D
DWE
T
R
H
F
S
M
QQ
L
N
L
N
N
A
A
F
D
L
A
RNA
S
L
STN
I
N
A
N
H
-
S
T
V
T
LG
--
S
ED
L
Y
ID
-------
I
N
DG
N
G
VQTTPSR
G
Q
S
KATTET
D
Q
-
S
R
F
N
G
R
V
T
L
KNG
S
T
L
T
I
-
N
EH
F
T
GGI
fig|656417.3.peg.5218
Escherichia coli M605 (371-718/1283)
V
N
QGAG
T
L
T
F
DDD
--
Y
I
V
KPV
--
DTQ
TW
K
G
G
GI
IVNGEHL
V
D
W
Q
I
NGV
T
GD
S
LHK
L
G
T
GTL
K
I
N
-
G
I
G
V
N
P
G
S
L
S
VGDG
T
V
I
L
A
Q
R
A
D
DN
G
LS
QAFSSV
S
I
V
SG
R
PT
L
VL
NDDK
Q
I
N
P
DN
----
I
K
WG
Y
H
GG
K
LD
I
NGN
SL
TF
H
KL
N
G
AD
D
GA
I
L
T
--
N
-
S
G-SM
A
N
V
N
L
DF
-
--
--------
-
--
------
----
----
--
-
-
-
-
--
-
-----------
---
---
--
---
--
--------
--
-
--
-NSPD
T
TATIAN
-
----
-
-
---
-
I
W
HG
H
F
T
GN
L
N
INNEVTAGT-
---
QNDFAI
DG
GV
N
A
-
Q
G
SI
T
Q
Q
NG
R
L
FM
QGHPV
V
HA
V
----
--
-
-
-
-
---------
-
----
--
-
SSQ
D
VANKLKALGDNSVLT
Q
PV
SF
T
Q
N
DWENR
Q
F
S
M
AE
L
N
L
Q
N
A
E
F
N
L
A
RNA
S
L
NTR
I
N
A
D
H
-
S
T
V
T
LG
--
S
ED
L
Y
ID
-------
L
N
DG
N
G
VATKPTL
G
K
S
KATAED
D
Q
-
S
R
F
N
G
H
V
Q
L
QQG
S
A
L
T
I
-
N
EH
F
A
GGI
fig|431946.3.peg.4172
Escherichia coli SE15 (366-713/1278)
V
N
QGAG
T
L
T
F
DDD
--
Y
I
V
KPV
--
DTQ
TW
K
G
G
GI
IVNGEHL
V
D
W
Q
I
NGV
T
GD
S
LHK
L
G
T
GTL
K
I
N
-
GTG
V
N
P
G
S
L
S
VGDG
T
V
I
L
A
Q
R
A
D
DN
G
LS
QAFSSV
S
I
V
SG
R
PT
L
VL
NDDK
Q
I
N
P
DN
----
I
K
WG
Y
H
GG
K
LD
I
NGN
SL
TF
H
KL
N
G
AD
D
GA
I
L
T
--
N
-
S
G-SM
A
N
V
N
L
DF
-
--
--------
-
--
------
----
----
--
-
-
-
-
--
-
-----------
---
---
--
---
--
--------
--
-
--
-NSPD
T
TATVAN
-
----
-
-
---
-
I
W
HG
H
F
T
GN
L
N
INNEVTAGT-
---
QNDFAI
DG
GV
N
T
-
Q
G
SI
T
Q
Q
NG
R
L
FM
QGHPV
V
HA
V
----
--
-
-
-
-
---------
-
----
--
-
SSQ
D
VANKLKALGDNSVLT
Q
PV
SF
T
Q
N
DWENR
Q
F
S
M
AE
L
N
L
Q
N
A
E
F
N
L
A
RNA
S
L
NTR
I
N
A
E
H
-
S
T
V
T
LG
--
S
ED
L
Y
ID
-------
L
N
DG
N
G
VATKPTL
G
K
S
KATAED
D
Q
-
S
R
F
N
G
H
V
Q
L
QQG
S
A
L
T
I
-
N
EH
F
A
GGI
fig|656440.3.peg.3872
Escherichia coli TA206 (361-705/1255)
V
N
QGAG
T
I
T
F
NGD
--
Y
L
V
KPD
--
ADQ
TW
V
G
G
GI
IVNGDHT
V
N
W
Q
VNGV
K
GD
SM
HK
L
G
T
GTL
N
I
S
-
GTG
I
N
P
G
T
L
S
VGDG
T
VVL
A
Q
K
P
D
SN
G
QV
QAF
E
S
A
S
I
V
SG
R
PT
L
VL
SDSQ
Q
M
N
P
DN
----
I
K
WG
Y
RGG
K
LD
I
NGN
DL
I
F
H
A
L
N
AAD
E
GA
I
L
T
--
N
-
S
G-SL
A
T
A
N
L
DF
-
--
--------
-
--
------
----
----
--
-
-
-
-
--
-
-----------
---
---
--
---
--
--------
--
-
--
-NSTD
T
TKPVTT
-
----
-
-
---
-
M
F
HG
F
F
T
GN
V
N
VKNNATSNV-
---
NNTFVV
DG
GI
N
T
P
A
G
SM
T
Q
Q
G
G
R
L
FF
QGHPV
I
HA
V
----
--
-
-
-
-
---------
-
----
--
-
STQ
S
VANKLKALGDDSVLT
Q
PV
SF
T
Q
S
DW
Q
T
R
Q
F
N
L
KS
L
D
L
N
N
A
A
F
Y
L
A
RNA
G
L
TTT
I
N
A
N
N
-
S
T
V
T
LG
--
S
ED
L
Y
ID
-------
T
N
DG
N
G
VKTTPVE
G
Q
S
VATASE
D
Q
-
S
H
F
T
G
N
V
N
L
TNG
S
A
L
R
V
-
N
EN
F
fig|340185.3.peg.3793
Escherichia coli E22 (353-719/1309)
LN
S
G
T
G
G
L
I
F
DEG
QH
Y
S
V
IGK
--
-DK
T
Y
K
GAG
V
EIGKGTV
V
D
W
S
V
K
G
A
A
N
DNLHK
T
G
A
GTL
N
VN
VAQ
G
N
N
-
--
LK
T
GDG
T
V
F
LN
A
E
-
-
--
-
--
K
AF
N
A
I
Y
V
ASG
R
G
TV
K
L
GQAD
ALD
K
N
S
DYRG
I
Y
FT
S
RGG
T
LDLNG
F
SQ
S
F
K
K
I
A
A
T
D
V
G
T
I
I
T
--
N
T
S
D-KT
A
T
L
S
L
Q-
-
--
--------
-
--
------
----
----
--
-
-
-
-
--
-
-----------
---
---
--
---
--
--------
--
-
--
-----
-
------
-
----
-
N
PSR
Y
V
YHG
S
I
T
GN
T
N
IEHTGTQKSA
---
DSSLII
DG
NI
N
T
-
H
N
DI
T
V
R
N
S
Q
L
RL
QGH
AT
T
HA
I
FR
D
G
PR
-
H
C
Y
VP
---
GVLC
D
KD
F
V
AD
F
ARL
E
SEANKKNNSAYKTNN
Q
VA
SF
D
Q
P
DWE
T
R
H
F
R
F
KT
L
N
L
E
N
A
E
F
T
T
A
RN
S
V
V
EGD
I
V
A
S
N
-
S
T
L
K
LG
G
-
D
VP
VFID
MYDG
I
NIT
G
N
G
F
G
FRQDVRE
G
R
S
ADDGS-
-
-
-
S
S
Y
T
G
N
I
T
L
QKG
S
T
L
D
I
-
N
NR
F
T
GGI
fig|340185.4.peg.3988
Escherichia coli E22 (298-664/1254)
LN
S
G
T
G
G
L
I
F
DEG
QH
Y
S
V
IGK
--
-DK
T
Y
K
GAG
V
EIGKGTV
V
D
W
S
V
K
G
A
A
N
DNLHK
T
G
A
GTL
N
VN
VAQ
G
N
N
-
--
LK
T
GDG
T
V
F
LN
A
E
-
-
--
-
--
K
AF
N
A
I
Y
V
ASG
R
G
TV
K
L
GQAD
ALD
K
N
S
DYRG
I
Y
FT
S
RGG
T
LDLNG
F
SQ
S
F
K
K
I
A
A
T
D
V
G
T
I
I
T
--
N
T
S
D-KT
A
T
L
S
L
Q-
-
--
--------
-
--
------
----
----
--
-
-
-
-
--
-
-----------
---
---
--
---
--
--------
--
-
--
-----
-
------
-
----
-
N
PSR
Y
V
YHG
S
I
T
GN
T
N
IEHTGTQKSA
---
DSSLII
DG
NI
N
T
-
H
N
DI
T
V
R
N
S
Q
L
RL
QGH
AT
T
HA
I
FR
D
G
PR
-
H
C
Y
VP
---
GVLC
D
KD
F
V
AD
F
ARL
E
SEANKKNNSAYKTNN
Q
VA
SF
D
Q
P
DWE
T
R
H
F
R
F
KT
L
N
L
E
N
A
E
F
T
T
A
RN
S
V
V
EGD
I
V
A
S
N
-
S
T
L
K
LG
G
-
D
VP
VFID
MYDG
I
NIT
G
N
G
F
G
FRQDVRE
G
R
S
ADDGS-
-
-
-
S
S
Y
T
G
N
I
T
L
QKG
S
T
L
D
I
-
N
NR
F
T
GGI
fig|216593.1.peg.985
Escherichia coli E2348/69 (362-726/1308)
G
S
G
G
L
I
F
DAG
H
H
Y
T
V
TGN
--
-NK
T
FK
GAG
L
DIGDNTT
V
D
W
N
V
K
GV
V
GDNLHKIG
A
GTL
N
VN
V
S
Q
G
N
N
-
--
LK
T
GDG
L
VVLN
SA
-
-
--
-
--
N
AF
D
N
I
Y
M
ASG
H
G
V
V
K
I
NHSA
AL
N
Q
N
N
DYRG
I
F
FT
E
N
GG
T
LDLNG
Y
DQ
S
F
N
K
I
A
A
T
D
I
GA
L
I
T
--
N
S
A
V-QK
A
V
L
S
V
N-
-
--
--------
-
--
------
----
----
--
-
-
-
-
--
-
-----------
---
---
--
---
--
--------
--
-
--
-----
-
------
-
----
-
N
QSN
Y
M
YHG
S
V
S
GN
T
E
INHQFDTQKN
---
NSRLIL
DG
NV
D
I
-
T
N
DI
N
I
K
N
S
Q
L
TM
QGH
AT
S
HA
V
FREG
GV
-
T
C
M
L
P
---
GV
I
C
E
KDYV
SG
I
QQQ
E
NSANKNNNTDYKTNN
Q
VS
SF
E
Q
P
DWENR
L
F
K
F
KT
L
N
L
I
N
S
D
F
I
V
G
RNA
I
V
VGD
I
S
A
N
N
-
S
T
L
S
L
S
G
K
D
TK
V
H
ID
MYDGKNIT
G
DG
F
G
FRQDIKD
G
V
S
VSPES-
-
-
-
S
S
Y
F
G
N
V
T
L
NNH
S
L
L
D
I
-
G
NK
F
T
GGI
fig|574521.7.peg.2961
Escherichia coli O127:H6 str. E2348/69 (362-726/1308)
G
S
G
G
L
I
F
DAG
H
H
Y
T
V
TGN
--
-NK
T
FK
GAG
L
DIGDNTT
V
D
W
N
V
K
GV
V
GDNLHKIG
A
GTL
N
VN
V
S
Q
G
N
N
-
--
LK
T
GDG
L
VVLN
SA
-
-
--
-
--
N
AF
D
N
I
Y
M
ASG
H
G
V
V
K
I
NHSA
AL
N
Q
N
N
DYRG
I
F
FT
E
N
GG
T
LDLNG
Y
DQ
S
F
N
K
I
A
A
T
D
I
GA
L
I
T
--
N
S
A
V-QK
A
V
L
S
V
N-
-
--
--------
-
--
------
----
----
--
-
-
-
-
--
-
-----------
---
---
--
---
--
--------
--
-
--
-----
-
------
-
----
-
N
QSN
Y
M
YHG
S
V
S
GN
T
E
INHQFDTQKN
---
NSRLIL
DG
NV
D
I
-
T
N
DI
N
I
K
N
S
Q
L
TM
QGH
AT
S
HA
V
FREG
GV
-
T
C
M
L
P
---
GV
I
C
E
KDYV
SG
I
QQQ
E
NSANKNNNTDYKTNN
Q
VS
SF
E
Q
P
DWENR
L
F
K
F
KT
L
N
L
I
N
S
D
F
I
V
G
RNA
I
V
VGD
I
S
A
N
N
-
S
T
L
S
L
S
G
K
D
TK
V
H
ID
MYDGKNIT
G
DG
F
G
FRQDIKD
G
V
S
VSPES-
-
-
-
S
S
Y
F
G
N
V
T
L
NNH
S
L
L
D
I
-
G
NK
F
T
GGI
fig|656417.3.peg.5223
Escherichia coli M605 (298-664/1254)
LN
S
G
T
G
G
L
I
F
DEG
QH
Y
S
V
IGK
--
-DK
A
Y
K
GAG
V
EIGKDTV
V
D
W
S
V
K
G
E
A
N
DNLHK
T
G
A
GTL
N
VN
VAQ
G
N
N
-
--
LK
T
GDG
T
V
F
LN
A
E
-
-
--
-
--
K
AF
N
A
I
Y
V
ASG
R
G
TV
K
L
GQAD
ALD
K
N
S
DYRG
I
Y
FT
S
RGG
T
LDLNG
F
SQ
S
F
K
K
I
A
A
T
D
V
G
T
I
I
T
--
N
T
S
D-KT
A
T
L
S
L
Q-
-
--
--------
-
--
------
----
----
--
-
-
-
-
--
-
-----------
---
---
--
---
--
--------
--
-
--
-----
-
------
-
----
-
N
PSR
Y
V
YHG
S
I
T
GN
T
N
IEHTGTQKSA
---
DSSLII
DG
NI
N
T
-
R
N
DI
T
V
R
N
S
Q
L
RL
QGH
AT
S
HA
I
FREG
PR
-
H
C
Y
VP
---
GVLC
D
KDYV
TD
F
ARL
E
SEANKKNNSAYKTNN
Q
VA
SF
D
Q
P
DWE
T
R
H
F
R
F
KT
L
N
L
E
N
S
E
F
T
T
A
RN
S
V
V
EGD
I
V
A
S
N
-
S
T
L
K
LG
G
-
D
VP
VFID
MYDG
I
NIT
G
N
G
F
G
FRQDVRE
G
R
S
ADDGS-
-
-
-
S
S
Y
T
G
K
I
T
L
QKG
S
T
L
D
I
-
N
NR
F
I
GGI
fig|431946.3.peg.4176
Escherichia coli SE15 (298-664/1254)
LN
S
G
T
G
G
L
I
F
DEG
QH
Y
S
V
IGK
--
-DK
A
Y
K
GAG
V
EIGKDTV
V
D
W
S
V
K
G
E
A
N
DNLHK
T
G
A
GTL
N
VN
VAQ
G
N
N
-
--
LK
T
GDG
T
V
F
LN
A
E
-
-
--
-
--
K
AF
N
A
I
Y
V
ASG
R
G
TV
K
L
GQAD
ALD
K
N
S
DYRG
I
Y
FT
S
RGG
T
LDLNG
F
SQ
S
F
K
K
I
A
A
T
D
V
G
T
I
I
T
--
N
T
S
D-KT
A
T
L
S
L
Q-
-
--
--------
-
--
------
----
----
--
-
-
-
-
--
-
-----------
---
---
--
---
--
--------
--
-
--
-----
-
------
-
----
-
N
PSR
Y
V
YHG
S
I
T
GN
T
N
IEHTGTQKSA
---
DSSLII
DG
NI
N
T
-
R
N
DI
T
V
R
N
S
Q
L
RL
QGH
AT
S
HA
I
FREG
PR
-
H
C
Y
VP
---
GVLC
D
KDYV
TD
F
ARL
E
SEANKKNNSAYKTNN
Q
VA
SF
D
Q
P
DWE
T
R
H
F
R
F
KT
L
N
L
E
N
S
E
F
T
T
A
RN
S
V
V
EGD
I
V
A
S
N
-
S
T
L
K
LG
G
-
D
VP
VFID
MYDG
I
NIT
G
N
G
F
G
FRQDVRE
G
R
S
ADDGS-
-
-
-
S
S
Y
T
G
K
I
T
L
QKG
S
T
L
D
I
-
N
NR
F
I
GGI
fig|562.376.peg.3462
Escherichia coli WV_060327 (211-575/1157)
G
S
G
G
L
I
F
DAG
H
H
Y
T
V
TGN
--
-NK
T
FK
GAG
L
DIGDNTT
V
D
W
N
V
K
GV
V
GDNLHKIG
A
GTL
N
VN
V
S
Q
G
N
N
-
--
LK
T
GDG
L
VVLN
SA
-
-
--
-
--
N
AF
D
N
I
Y
M
ASG
H
G
V
V
K
I
NHSA
AL
N
Q
N
N
DYRG
I
F
FT
E
N
GG
T
LDLNG
Y
DQ
S
F
N
K
I
A
A
T
D
I
GA
L
I
T
--
N
S
A
V-QK
A
V
L
S
V
N-
-
--
--------
-
--
------
----
----
--
-
-
-
-
--
-
-----------
---
---
--
---
--
--------
--
-
--
-----
-
------
-
----
-
N
QSN
Y
M
YHG
S
V
S
GN
T
E
INHQFDTQKN
---
NSRLIL
DG
NV
D
I
-
T
N
DI
N
I
K
N
S
Q
L
TM
QGH
AT
S
HA
V
FREG
GV
-
T
C
M
L
P
---
GV
I
C
E
KDYV
SG
I
QQQ
E
NSANKNNNTDYKTNN
Q
VS
SF
E
Q
P
DWENR
L
F
K
F
KT
L
N
L
I
N
S
D
F
I
V
G
RNA
I
V
VGD
I
S
A
N
N
-
S
T
L
S
L
S
G
K
D
TK
V
H
ID
MYDGKNIT
G
DG
F
G
FRQDIKD
G
V
S
VSPES-
-
-
-
S
S
Y
F
G
N
V
T
L
NNH
S
L
L
D
I
-
G
NK
F
T
GGI
fig|585055.6.peg.4704
Escherichia coli 55989 (348-715/1285)
G
I
G
G
L
I
F
DKN
Q
T
Y
K
V
YGK
--
-DK
SY
K
GAGI
DIDNNTT
V
E
W
N
V
K
GV
A
GDNLHKIG
S
GTL
D
V
KI
AQ
G
N
N
-
--
LK
I
G
N
G
T
V
I
L
S
A
E
-
-
--
-
--
K
AF
N
K
I
Y
M
A
G
G
K
G
TV
K
I
NAKD
AL
S
E
-
S
GNGE
I
Y
FT
R
N
GG
T
LDLNG
Y
DQ
S
F
Q
K
I
A
A
T
D
A
G
T
T
V
T
--
N
SN
V-KQ
S
T
L
S
L
T-
-
--
--------
-
--
------
----
----
--
-
-
-
-
--
-
-----------
---
---
--
---
--
--------
--
-
--
-----
-
------
-
----
-
N
TDA
Y
M
YHG
N
V
S
GN
I
S
INHIINTTQQ
HNN
NANLIF
DG
SV
D
I
-
K
N
DI
S
V
R
N
A
Q
L
TL
QGH
AT
E
HA
I
F
K
EG
NN
-
N
C
P
I
P
----
F
LC
Q
KDY
S
AA
I
KDQ
E
STVNKRYNTEYKSNN
Q
IA
SF
S
Q
P
DWE
S
R
K
F
N
F
RK
L
N
L
E
N
A
T
L
S
I
G
R
D
A
N
V
KGH
I
E
A
K
N
-
S
Q
I
V
LG
--
N
KT
AY
ID
M
FS
G
R
NIT
G
E
G
F
G
FRQQLRS
G
D
S
AGE---
-
-
-
S
S
F
N
G
S
L
S
A
QN-
S
K
I
T
V
-
G
DK
S
T
VT
M
T
G
A
L
SLI
fig|585055.8.peg.4709
Escherichia coli 55989 (348-715/1285)
G
I
G
G
L
I
F
DKN
Q
T
Y
K
V
YGK
--
-DK
SY
K
GAGI
DIDNNTT
V
E
W
N
V
K
GV
A
GDNLHKIG
S
GTL
D
V
KI
AQ
G
N
N
-
--
LK
I
G
N
G
T
V
I
L
S
A
E
-
-
--
-
--
K
AF
N
K
I
Y
M
A
G
G
K
G
TV
K
I
NAKD
AL
S
E
-
S
GNGE
I
Y
FT
R
N
GG
T
LDLNG
Y
DQ
S
F
Q
K
I
A
A
T
D
A
G
T
T
V
T
--
N
SN
V-KQ
S
T
L
S
L
T-
-
--
--------
-
--
------
----
----
--
-
-
-
-
--
-
-----------
---
---
--
---
--
--------
--
-
--
-----
-
------
-
----
-
N
TDA
Y
M
YHG
N
V
S
GN
I
S
INHIINTTQQ
HNN
NANLIF
DG
SV
D
I
-
K
N
DI
S
V
R
N
A
Q
L
TL
QGH
AT
E
HA
I
F
K
EG
NN
-
N
C
P
I
P
----
F
LC
Q
KDY
S
AA
I
KDQ
E
STVNKRYNTEYKSNN
Q
IA
SF
S
Q
P
DWE
S
R
K
F
N
F
RK
L
N
L
E
N
A
T
L
S
I
G
R
D
A
N
V
KGH
I
E
A
K
N
-
S
Q
I
V
LG
--
N
KT
AY
ID
M
FS
G
R
NIT
G
E
G
F
G
FRQQLRS
G
D
S
AGE---
-
-
-
S
S
F
N
G
S
L
S
A
QN-
S
K
I
T
V
-
G
DK
S
T
VT
M
T
G
A
L
SLI
fig|585396.4.peg.5723
Escherichia coli O111:H- str. 11128 (307-674/1263)
GAG
G
L
V
F
NDK
KT
Y
Q
V
NGE
--
-DF
T
FK
GAG
V
DTRNGST
V
E
W
N
I
RYD
N
K
DNLHKIG
N
GTL
D
V
RKS
Q
N
T
N
-
--
LK
I
G
E
G
L
V
I
L
G
A
E
-
-
--
-
--
K
T
F
N
N
I
Y
M
ASG
D
G
TV
K
L
NANN
AL
N
G
-
D
DY
A
GV
F
FT
E
N
GG
T
LDLNG
Y
DQ
V
F
K
Y
I
A
A
T
D
S
G
T
T
I
T
--
N
T
N
KDKP
A
T
L
S
I
N-
-
--
--------
-
--
------
----
----
--
-
-
-
-
--
-
-----------
---
---
--
---
--
--------
--
-
--
-----
-
------
-
----
-
N
TDS
YIYHG
N
I
T
GN
T
K
ITHSFDQKQQ
---
NDRLIL
DG
NI
N
T
-
T
N
DI
S
I
K
N
A
H
L
VM
QGH
AT
N
HA
V
FR
D
G
GF
-
S
C
S
F
P
AQLKW
LC
G
T
DYV
AV
I
QNQ
E
KSVNQKQNTDYKTNN
L
VS
D
L
S
Q
P
DWE
R
R
T
F
N
F
GT
L
H
L
E
N
A
D
F
A
V
A
RNA
D
V
KGN
I
Y
A
K
N
-
S
S
V
M
LG
--
S
DI
AY
ID
LHS
GKNI
I
N
DG
F
S
FRKDIRS
G
-
-
ISESTA
G
D
L
S
S
F
T
G
R
V
V
A
DN-
S
T
L
A
I
-
N
NK
F
L
G
EF
T
fig|216592.1.peg.5179
Escherichia coli 042 (380-733/1299)
Y
T
V
SAE
GN
NNV
T
FK
GAGI
DIGKGST
V
D
W
N
I
K
Y
A
S
N
D
A
LHKIG
E
G
S
L
N
V
IQ
AQ
N
T
N
-
--
LK
T
G
N
G
T
V
I
L
G
A
Q
-
-
--
-
--
K
T
F
N
N
I
Y
V
A
G
G
P
G
TV
Q
L
NAEN
AL
G
E
-G
DY
A
G
I
F
FT
E
N
GG
K
LDLNG
H
NQ
TF
K
K
I
A
A
T
D
S
G
T
T
I
T
--
N
SN
TTKE
S
V
L
S
V
N-
-
--
--------
-
--
------
----
----
--
-
-
-
-
--
-
-----------
---
---
--
---
--
--------
--
-
--
-----
-
------
-
----
-
N
QNN
YIYHG
N
V
D
GN
V
R
LEHHLDTKQD
---
NARLIL
DG
DI
Q
-
-
A
N
SI
S
I
K
N
A
P
L
VM
QGH
AT
D
HA
I
FR
TT
KT
N
N
C
P
-----
EF
LC
G
V
D
W
V
TR
I
KNA
E
NSVNQKNKTTYKSNN
Q
VS
D
L
S
Q
P
DWE
T
R
K
F
R
F
DN
L
N
I
E
D
S
S
L
S
I
A
RNA
D
V
EGN
I
Q
A
K
N
-
S
V
I
N
I
G
--
D
KT
AY
ID
L
Y
S
GKNIT
G
A
G
F
T
FRQDIKS
G
D
S
IGE---
-
-
-
S
K
F
T
G
G
I
M
A
TD-
G
S
I
S
I
-
G
DK
A
I
VT
LN
T
V
SS
fig|216592.3.peg.5129
Escherichia coli 042 (376-729/1295)
Y
T
V
SAE
GN
NNV
T
FK
GAGI
DIGKGST
V
D
W
N
I
K
Y
A
S
N
D
A
LHKIG
E
G
S
L
N
V
IQ
AQ
N
T
N
-
--
LK
T
G
N
G
T
V
I
L
G
A
Q
-
-
--
-
--
K
T
F
N
N
I
Y
V
A
G
G
P
G
TV
Q
L
NAEN
AL
G
E
-G
DY
A
G
I
F
FT
E
N
GG
K
LDLNG
H
NQ
TF
K
K
I
A
A
T
D
S
G
T
T
I
T
--
N
SN
TTKE
S
V
L
S
V
N-
-
--
--------
-
--
------
----
----
--
-
-
-
-
--
-
-----------
---
---
--
---
--
--------
--
-
--
-----
-
------
-
----
-
N
QNN
YIYHG
N
V
D
GN
V
R
LEHHLDTKQD
---
NARLIL
DG
DI
Q
-
-
A
N
SI
S
I
K
N
A
P
L
VM
QGH
AT
D
HA
I
FR
TT
KT
N
N
C
P
-----
EF
LC
G
V
D
W
V
TR
I
KNA
E
NSVNQKNKTTYKSNN
Q
VS
D
L
S
Q
P
DWE
T
R
K
F
R
F
DN
L
N
I
E
D
S
S
L
S
I
A
RNA
D
V
EGN
I
Q
A
K
N
-
S
V
I
N
I
G
--
D
KT
AY
ID
L
Y
S
GKNIT
G
A
G
F
T
FRQDIKS
G
D
S
IGE---
-
-
-
S
K
F
T
G
G
I
M
A
TD-
G
S
I
S
I
-
G
DK
A
I
VT
LN
T
V
SS
Consen1
Primary consensus
vtQGaG
L
F
--
Y
V
--
TwtGaGi
V
W
VnGv
gDNLHKiG
GTL
vn
-
gtG
N
ggLKvGdG
VvLnqq
d
g
qAFssv
iaSG
pTVvL
qvn
dn
----
i
wg
rGG
LDlNGn
tF
kl
AaD
Ga
i
--
N
-
s
a
l
L
-
--------
--
----
gt
g
l
--
y
ilk
yg
--
we
vg
a
r
----
n
yiyHG
l
GN
n
---
DG
n
-
g
t
eng
L
QGHpv
HA
----
-
-
---------
----
-
s
q
sf
Q
DWEnR
F
f
L
L
da
F
l
RNa
l
I
a
N
-
S
v
LG
--
d
vfiD
-------
k
dG
G
G
S
d
-
S
f
G
v
L
S
L
I
-
n
F
GGittasSLI
Consen2
Secondary consensus
ln
t
qh
fk
g
v
k
a
n
iqvaq
--
t
n
i
a
-
-
k
n
i
v
g
k
ald
n
dyrgv
ft
n
s
i
t
t
l
sn
s
q
kaqdtnvs
pt
news
--
-
-
yi
-
---
--
wg
--
--
-
-
ilag
v
f
d
p
n
s
ss
at
freg
c
vp
gvlc
kdyv
i
e
-
-
l
t
m
n
s
v
s
g
s
ayv
mydgknit
n
-
y
i
g
lngvl
Consensus 1
(when a gap)
Conservative difference
Consensus 2
(when a gap)
Nonconservative diff.
Other character