┌─ Escherichia coli (2-235/243) FVEC1302   
                                                            ├─ Escherichia coli (2-235/243) MS 198-1   
                                                  ┌─────────┼─ Escherichia coli (2-235/243) UMN026   
                                                  │         └─ Escherichia coli (5-238/246) FVEC1412   
                  ┌───────────────────────────────┤        ┌─ Escherichia coli (8-238/240) HS   
                  │                               └────────┤┌─ Escherichia coli (8-238/240) B7A   
┌─────────────────┤                                        └┼─ Escherichia coli (8-238/240) B7A   
│                 │                                         └─ Escherichia coli (8-238/240) B str. REL606   
│                 └────────────────────────────────────────────────── Escherichia coli (4-227/244) TA280   
│                                                            ┌─ Escherichia coli (1-252/253) 042   
│                                                            ├─ Escherichia coli (1-252/253) 1044A   
│                                                            ├─ Escherichia coli (1-252/253) 1212A   
│                                                            ├─ Escherichia coli (1-252/253) 53638   
│                                                            ├─ Escherichia coli (1-252/253) ATCC 8739   
│                                                            ├─ Escherichia coli (1-252/253) FVEC1302   
│                                                            ├─ Escherichia coli (1-252/253) M718   
│                                                            ├─ Escherichia coli (1-252/253) MS 198-1   
│                                                            ├─ Escherichia coli (1-252/253) O157:H7   
│                                                            ├─ Escherichia coli (1-252/253) O157:H7 EDL933   
│                                                            ├─ Escherichia coli (1-252/253) O157:H7 str. EC4042   
│                                                            ├─ Escherichia coli (1-252/253) O157:H7 str. EC4076   
│                                                            ├─ Escherichia coli (1-252/253) O157:H7 str. EC4115   
│                                                            ├─ Escherichia coli (1-252/253) O157:H7 str. EC4206   
│                                                            ├─ Escherichia coli (1-252/253) O157:H7 str. EC4486   
│                                                            ├─ Escherichia coli (1-252/253) O157:H7 str. EC508   
│                                                            ├─ Escherichia coli (1-252/253) O157:H7 str. FRIK2000   
│                                                            ├─ Escherichia coli (1-252/253) O157:H7 str. Sakai   
│                                                            ├─ Escherichia coli (1-252/253) O157:H7 str. TW14588   
│                                                           ┌┼─ Escherichia coli (1-252/253) UMN026   
│                                                           │├─ Escherichia coli (1-252/253) O55:H7 str. CB9615   
│                                                           │├─ Escherichia coli (1-252/253) O157:H7 str. TW14359   
│                                                           │├─ Escherichia coli (1-252/253) O157:H7 str. FRIK966   
│                                                           │├─ Escherichia coli (1-252/253) O157:H7 str. EC869   
│                                                           │├─ Escherichia coli (1-252/253) O157:H7 str. EC4501   
│                                                           │├─ Escherichia coli (1-252/253) O157:H7 str. EC4401   
│                                                           │├─ Escherichia coli (1-252/253) O157:H7 str. EC4196   
│                                                           │├─ Escherichia coli (1-252/253) O157:H7 str. EC4113   
│                                                           │├─ Escherichia coli (1-252/253) O157:H7 str. EC4045   
│                                                           │├─ Escherichia coli (1-252/253) O157:H7 str. EC4024   
│                                                           │├─ Escherichia coli (1-252/253) O157:H7 EDL933   
│                                                           │├─ Escherichia coli (1-252/253) MS 69-1   
│                                                          ┌┤├─ Escherichia coli (1-252/253) MS 115-1   
│                                                          ││├─ Escherichia coli (1-252/253) FVEC1412   
│                                                          ││├─ Escherichia coli (1-252/253) ATCC 8739   
│                                                          ││├─ Escherichia coli (1-252/253) 536A   
│                                                          ││├─ Escherichia coli (1-252/253) 53638   
│                                                          ││├─ Escherichia coli (1-252/253) 1125A   
│                                                          ││└─ Escherichia coli (1-252/253) 042   
│                                                          ││  ┌─ Escherichia coli (1-252/253) B str. REL606   
│                                                          ││ ┌┴─ Escherichia coli (1-252/253) OP50   
│                                                          ││┌┴─ Escherichia coli (1-248/249) ETEC H10407   
│                                                          │││┌─ Escherichia coli (1-252/253) DH1   
│                                                          │││├─ Escherichia coli (1-252/253) K12   
┤                                                          │││├─ Escherichia coli (1-252/253) MS 146-1   
│                                                          │└┤├─ Escherichia coli (1-252/253) MS 196-1   
│                                                          │ │├─ Escherichia coli (1-252/253) str. K-12 substr. DH10B   
│                                                         ┌┤ │├─ Escherichia coli (1-252/253) str. K-12 substr. DH10B   
│                                                         ││ │├─ Escherichia coli (1-252/253) str. K-12 substr. MG1655   
│                                                         ││ └┼─ Escherichia coli (1-252/253) str. K-12 substr. MG1655   
│                                                         ││  ├─ Escherichia coli (1-252/253) str. K-12 substr. DH10B   
│                                                         ││  ├─ Escherichia coli (1-252/253) str. K-12 substr. DH10B   
│                                                         ││  ├─ Escherichia coli (1-252/253) W3110   
│                                                         ││  ├─ Escherichia coli (1-252/253) MS 175-1   
│                                                         ││  ├─ Escherichia coli (1-252/253) MS 116-1   
│                                                         ││  ├─ Escherichia coli (1-252/253) H736   
│                                                         ││  └─ Escherichia coli (1-252/253) BW2952   
│                                                         ││┌─ Escherichia coli (1-252/253) TA143   
│                                                         │││    ┌─ Escherichia coli (1-252/253) E110019   
│                                                         │││    ├─ Escherichia coli (1-252/253) MS 124-1   
│                                                         │││   ┌┼─ Escherichia coli (1-252/253) O26:H11 str. 11368   
│                                                         │││   │├─ Escherichia coli (1-252/253) MS 84-1   
│                                                         │└┤  ┌┤└─ Escherichia coli (1-252/253) E110019   
│                                                         │ │ ┌┤└─ Escherichia coli (1-252/253) O111:H- str. 11128   
│                                                         │ │ │└┬─ Escherichia coli (1-252/253) IAI1   
│                                                         │ │┌┤ └─ Escherichia coli (1-252/253) IAI1   
│                                                         │ ││└─ Escherichia coli (1-252/253) SE11   
│                                                         │ ││┌─ Escherichia coli (1-252/253) EC4100B   
│                                                        ┌┤ └┤│┌─ fig|6666666.5357.peg.241 TY-2482 (1-252/253) strain   
│                                                        ││  ││├─ Escherichia coli (1-252/253) 55989   
│                                                        ││  ││├─ Escherichia coli (1-252/253) B171   
│                                                        ││  ││├─ Escherichia coli (1-252/253) B7A   
│                                                        ││  └┤├─ Escherichia coli (1-252/253) E22   
│                                                        ││   │├─ Escherichia coli (1-252/253) E24377A   
│                                                        ││   │├─ Escherichia coli (1-252/253) H591   
│                                                        ││   │├─ Escherichia coli (1-252/253) MS 119-7   
│                                                        ││   │├─ Escherichia coli (1-252/253) O103:H2 str. 12009   
│                                                        ││   │├─ Escherichia coli (1-252/253) W   
│                                                        ││   └┼─ Escherichia coli (1-252/253) W   
│                                                        ││    ├─ Escherichia coli (1-252/253) TA271   
│                                       ┌────────────────┤│    ├─ Escherichia coli (1-252/253) MS 145-7   
│                                       │                ││    ├─ Escherichia coli (1-252/253) KO11   
│                                       │                ││    ├─ Escherichia coli (1-252/253) E24377A   
│                                       │                ││    ├─ Escherichia coli (1-252/253) E22   
│                                       │                ││    ├─ Escherichia coli (1-252/253) B7A   
│                                       │                ││    ├─ Escherichia coli (1-252/253) B171   
│                                       │                ││    ├─ Escherichia coli (1-252/253) B088   
│                                       │                ││    ├─ Escherichia coli (1-252/253) 55989   
│                                       │                ││    └─ fig|1040638.4.peg.5244 O104:H4 (1-252/253) str. LB226692   
│                                       │                │└─ Escherichia coli (1-252/253) B354   
│                                       │                │┌─ Escherichia coli (1-252/253) IAI39   
│                                       │                └┼─ Escherichia coli (1-252/253) SMS-3-5   
└───────────────────────────────────────┤                 ├─ Escherichia coli (1-252/253) MS 21-1   
                                        │                 └─ Escherichia coli (1-252/253) IAI39   
                                        │                      ┌─ Escherichia coli E110019   
                                        │                     ┌┴─ Escherichia coli E110019   
                                        │                     │┌─ Escherichia coli UM146   
                                        │                     ││  ┌─ Escherichia coli 101-1   
                                        │                     ││  ├─ Escherichia coli 53638   
                                        │                     ││  ├─ Escherichia coli BL21   
                                        │                     ││  ├─ Escherichia coli BW2952   
                                        │                     ││  ├─ Escherichia coli ETEC H10407   
                                        │                     ││  ├─ Escherichia coli K12   
                                        │                     ││  ├─ Escherichia coli MS 116-1   
                                        └─────────────────────┤│  ├─ Escherichia coli MS 175-1   
                                                              ││  ├─ Escherichia coli MS 196-1   
                                                              ││  ├─ Escherichia coli W3110   
                                                              ││  ├─ Escherichia coli str. K-12 substr. DH10B   
                                                              ││ ┌┼─ Escherichia coli str. K-12 substr. MG1655   
                                                              ││ │├─ Escherichia coli str. K-12 substr. MG1655   
                                                              ││ │├─ Escherichia coli str. K-12 substr. DH10B   
                                                              ││ │├─ Escherichia coli OP50   
                                                              ││ │├─ Escherichia coli MS 187-1   
                                                              ││ │├─ Escherichia coli MS 146-1   
                                                              └┤┌┤├─ Escherichia coli KO11   
                                                               │││├─ Escherichia coli H736   
                                                               │││├─ Escherichia coli DH1   
                                                               │││├─ Escherichia coli (DE3) BL21(DE3)   
                                                               │││├─ Escherichia coli B str. REL606   
                                                               │││└─ Escherichia coli 53638   
                                                               ││└┬─ Escherichia coli 042   
                                                               ││ └─ Escherichia coli 042   
                                                               ││   ┌─ Escherichia coli B7A   
                                                               ││  ┌┴─ Escherichia coli B7A   
                                                               ││ ┌┴┬─ Escherichia coli IAI39   
                                                               ││┌┤ └─ Escherichia coli IAI39   
                                                               │││└┬─ Escherichia coli O83:H1 str. NRG 857C   
                                                               │││ └─ Escherichia coli NC101   
                                                               │││┌─ fig|6666666.5357.peg.784 TY-2482 strain   
                                                               │││├─ Escherichia coli 1125A   
                                                               │││├─ Escherichia coli 2362-75   
                                                               │││├─ Escherichia coli 536   
                                                               └┤│├─ Escherichia coli 55989   
                                                                ││├─ Escherichia coli 83972   
                                                                ││├─ Escherichia coli APEC O1   
                                                                ││├─ Escherichia coli ATCC 8739   
                                                                ││├─ Escherichia coli B171   
                                                                ││├─ Escherichia coli B185   
                                                                ││├─ Escherichia coli CFT073   
                                                                ││├─ Escherichia coli E22   
                                                                ││├─ Escherichia coli E2348/69   
                                                                ││├─ Escherichia coli E24377A   
                                                                ││├─ Escherichia coli ED1a   
                                                                ││├─ Escherichia coli F11   
                                                                ││├─ Escherichia coli FVEC1302   
                                                                ││├─ Escherichia coli H299   
                                                                ││├─ Escherichia coli HS   
                                                                ││├─ Escherichia coli IAI1   
                                                                ││├─ Escherichia coli IHE3034   
                                                                ││├─ Escherichia coli M718   
                                                                └┤├─ Escherichia coli MS 115-1   
                                                                 │├─ Escherichia coli MS 124-1   
                                                                 │├─ Escherichia coli MS 182-1   
                                                                 │├─ Escherichia coli MS 198-1   
                                                                 │├─ Escherichia coli MS 21-1   
                                                                 │├─ Escherichia coli MS 69-1   
                                                                 │├─ Escherichia coli MS 84-1   
                                                                 │├─ Escherichia coli O111:H- str. 11128   
                                                                 │├─ Escherichia coli O157:H7   
                                                                 │├─ Escherichia coli O157:H7 EDL933   
                                                                 │├─ Escherichia coli O157:H7 str. EC4042   
                                                                 │├─ Escherichia coli O157:H7 str. EC4076   
                                                                 │├─ Escherichia coli O157:H7 str. EC4115   
                                                                 │├─ Escherichia coli O157:H7 str. EC4206   
                                                                 │├─ Escherichia coli O157:H7 str. EC4486   
                                                                 │├─ Escherichia coli O157:H7 str. EC508   
                                                                 │├─ Escherichia coli O157:H7 str. FRIK2000   
                                                                 │├─ Escherichia coli O157:H7 str. Sakai   
                                                                 │├─ Escherichia coli O157:H7 str. TW14588   
                                                                 │├─ Escherichia coli O55:H7 str. CB9615   
                                                                 │├─ Escherichia coli SE11   
                                                                 │├─ Escherichia coli SMS-3-5   
                                                                 │├─ Escherichia coli TA206   
                                                                 │├─ Escherichia coli TA280   
                                                                 │├─ Escherichia coli UTI89   
                                                                 │├─ Escherichia coli W   
                                                                 └┼─ Escherichia coli WV_060327   
                                                                  ├─ Escherichia coli W   
                                                                  ├─ Escherichia coli UTI89   
                                                                  ├─ Escherichia coli UMN026   
                                                                  ├─ Escherichia coli TA271   
                                                                  ├─ Escherichia coli TA143   
                                                                  ├─ Escherichia coli SE15   
                                                                  ├─ Escherichia coli S88   
                                                                  ├─ Escherichia coli O26:H11 str. 11368   
                                                                  ├─ Escherichia coli O157:H7 str. TW14359   
                                                                  ├─ Escherichia coli O157:H7 str. FRIK966   
                                                                  ├─ Escherichia coli O157:H7 str. EC869   
                                                                  ├─ Escherichia coli O157:H7 str. EC4501   
                                                                  ├─ Escherichia coli O157:H7 str. EC4401   
                                                                  ├─ Escherichia coli O157:H7 str. EC4196   
                                                                  ├─ Escherichia coli O157:H7 str. EC4113   
                                                                  ├─ Escherichia coli O157:H7 str. EC4045   
                                                                  ├─ Escherichia coli O157:H7 str. EC4024   
                                                                  ├─ Escherichia coli O157:H7 EDL933   
                                                                  ├─ Escherichia coli O127:H6 str. E2348/69   
                                                                  ├─ Escherichia coli O103:H2 str. 12009   
                                                                  ├─ Escherichia coli MS 78-1   
                                                                  ├─ Escherichia coli MS 45-1   
                                                                  ├─ Escherichia coli MS 200-1   
                                                                  ├─ Escherichia coli MS 185-1   
                                                                  ├─ Escherichia coli MS 145-7   
                                                                  ├─ Escherichia coli MS 119-7   
                                                                  ├─ Escherichia coli MS 107-1   
                                                                  ├─ Escherichia coli M605   
                                                                  ├─ Escherichia coli IAI1   
                                                                  ├─ Escherichia coli HS   
                                                                  ├─ Escherichia coli H591   
                                                                  ├─ Escherichia coli FVEC1412   
                                                                  ├─ Escherichia coli F11   
                                                                  ├─ Escherichia coli ED1a   
                                                                  ├─ Escherichia coli EC4100B   
                                                                  ├─ Escherichia coli E24377A   
                                                                  ├─ Escherichia coli E22   
                                                                  ├─ Escherichia coli CFT073   
                                                                  ├─ Escherichia coli B354   
                                                                  ├─ Escherichia coli B171   
                                                                  ├─ Escherichia coli B088   
                                                                  ├─ Escherichia coli APEC O1   
                                                                  ├─ Escherichia coli ABU 83972   
                                                                  ├─ Escherichia coli 55989   
                                                                  ├─ Escherichia coli 536A   
                                                                  ├─ Escherichia coli 536   
                                                                  ├─ Escherichia coli 1212A   
                                                                  ├─ Escherichia coli 1044A   
                                                                  └─ fig|1040638.4.peg.1162 O104:H4 str. LB226692   
  
Transcriptional regulator of catabolic arginine decarboxylase (adiA) (129)
Porin thermoregulatory protein envY (92)
Type III secretion and flagellar regulator RtsA (4)
putative transcription regulator (3)
HTH-type transcriptional regulator gadW (1)
Type III secretion transcriptional regulator HilD (1)
Transcriptional regulator gadX (1)
Others (4)