┌─ Escherichia coli (189-283/285) MS 196-1 ┌┴─ Escherichia coli (189-283/285) O157:H7 str. FRIK966 ┌┴─ Escherichia coli (189-283/285) K12 (91) ┌┴┬─ Escherichia coli (189-283/285) TA280 ┌┤ └─ Escherichia coli (189-283/285) APEC O1 (6) │└┬─ Escherichia coli (189-283/285) MS 21-1 (1) ┌┤ └─ Escherichia coli (189-283/285) B185 ┌────────────────┤└─ Escherichia coli (189-283/285) SE15 ┌──────────┤ └─ Escherichia coli (189-283/285) 536 (14) ┌────┤ └────────────── Escherichia coli (168-270/283) K12 (133) │ └─┬──────────────────── Escherichia coli (252-342/351) 101-1 (9) │ └────────┬────────────── Escherichia coli (191-295/304) 2362-75 (16) ┌───┤ └───────────────────────────┬─ Escherichia coli (179-277/292) K12 (131) │ │ └─ Escherichia coli (124-222/226) O157:H7 str. EC4024 │ └──────────────┬──────────────────── Escherichia coli (138-242/255) ED1a (1) │ └─────────────────┬─ Escherichia coli (181-282/303) 101-1 (7) │ └┬─ Escherichia coli (181-282/303) B185 │ └┬─ Escherichia coli (181-282/303) K12 (116) ┌┤ └┬─ Escherichia coli (181-282/303) MS 115-1 ││ └─ Escherichia coli (181-282/303) 53638 (1) ││ ┌─ Escherichia coli (190-290/302) K12 (131) ││ ┌─────────────────────────┴─ Escherichia coli (190-290/302) O157:H7 EDL933 (1) ││ ┌────┴────────────────────────────────── Escherichia coli (177-263/271) MS 21-1 (54) │└───┬─┴─────────────── Escherichia coli (1-99/103) O157:H7 str. EC4024 │ └─────┬────────────────────────────── Escherichia coli (196-296/296) TA143 (1) │ └────────┬────────────────────────────────────────── fig|1040638.4.peg.3514 O104:H4 (214-316/319) str. LB226692 (49) │ └────────────────────────┬─ Escherichia coli (182-280/297) MS 69-1 │ └┬─ Escherichia coli (182-280/288) 83972 (14) │ └─ Escherichia coli (182-280/297) IAI39 (2) ┤ ┌─ Escherichia coli (163-274/279) M718 (22) │ ┌┴─ Escherichia coli (163-274/279) APEC O1 (6) │ ┌┴─ Escherichia coli (163-274/279) NC101 │ ┌┴─ Escherichia coli (163-274/279) E22 (82) │┌─────────────────────────────────────────┴─ Escherichia coli (164-275/280) K12 (18) ││ ┌─ fig|1040638.4.peg.5453 O104:H4 (179-279/284) str. LB226692 (54) ││ ┌┴─ Escherichia coli (179-279/284) O26:H11 str. 11368 ││ ┌┴─ Escherichia coli (179-279/284) 1044A (25) ││ ┌┴─ Escherichia coli (179-279/284) E24377A (3) ││ ┌┴─ Escherichia coli (179-279/284) K12 (23) ││ ┌──────────────────────────────────┴─ Escherichia coli (179-279/284) MS 107-1 ││ ┌────────────────────┴─────────────┬─ Escherichia coli (264-369/375) K12 (129) └┤ │ └┬─ Escherichia coli (188-288/299) 536 (1) │ │ └─ Escherichia coli (188-293/299) OP50 │ │ ┌─ Escherichia coli (176-271/278) E22 (9) │ │ ┌┴─ Escherichia coli (176-271/278) E24377A (1) │ │ ┌┴─ Escherichia coli (176-271/278) 042 (16) │ │ ┌┴─ Escherichia coli (176-271/278) H299 │ │ ┌┴─ Escherichia coli (176-271/278) K12 (72) │ │ ┌┴┬─ Escherichia coli (160-255/262) 1827-70 └──┤ ┌───────────┤ └─ Escherichia coli (176-271/278) ETEC H10407 │ ┌─────┤ └─ Escherichia coli (176-271/278) 1044A (28) │ │ └─────────────────────┬─ Escherichia coli (203-306/312) MS 21-1 │ │ └┬─ Escherichia coli (203-306/312) FVEC1302 (5) │ │ └┬─ Escherichia coli (203-306/312) 042 (1) │┌────┤ └┬─ Escherichia coli (203-306/312) K12 (120) ││ │ └┬─ Escherichia coli (203-306/312) TA143 ││ │ └┬─ Escherichia coli (203-306/312) IAI39 (1) ││ │ └─ Escherichia coli (173-276/282) 2362-75 ││ └──────────────────────────────────────┬─ Escherichia coli (293-384/392) MS 116-1 └┤ └─ Escherichia coli (293-384/392) K12 (131) │ ┌─ Escherichia coli (195-300/301) K12 (48) │ ┌┴─ Escherichia coli (191-296/297) O111:H- str. 11128 │ ┌───────────────────────┴─ Escherichia coli (195-300/301) ATCC 8739 (9) │ │ ┌───────────────── Escherichia coli (5-105/114) TA206 └──┤ │ ┌─ Escherichia coli (13-110/129) K12 (123) │ │ ┌┴─ Escherichia coli (11-108/127) MS 124-1 └────────┤ ┌───────────────┴─ Escherichia coli (11-108/126) O157:H7 str. EC4024 │ │ ┌─ Escherichia coli (26-127/138) 55989 (7) │ │ ┌────────┴─ Escherichia coli (26-127/138) MS 175-1 └─────┤ ┌─┴─────────────────────────────────────── Escherichia coli (11-103/114) MS 21-1 │ ┌──┴────────┬─ Escherichia coli (1-104/289) MS 185-1 (25) │ │ └─ Escherichia coli (1-104/289) K12 (105) └─┤ ┌─ Escherichia coli K12 (127) │ ┌┴─ Escherichia coli 83972 (1) │ ┌─────────┴─ Escherichia coli MS 200-1 └──┤ ┌──────────── Escherichia coli (1-104/268) TA280 │ │ ┌───── Escherichia coli (1-105/286) E24377A └────────┤ ┌────┴─── Escherichia coli (1-105/287) 101-1 │ ┌──┴────── Escherichia coli (50-148/331) E22 (1) └───┬─────────┴───── Escherichia coli (2-111/279) TA271 └────┬───────────── Escherichia coli (1-106/294) SE11 └─┬────────────── Escherichia coli (11-111/276) SE11 └───────┬─ Escherichia coli (1-106/283) B185 (9) └┬─ Escherichia coli (1-106/285) B171 (6) └┬─ Escherichia coli (1-106/285) TA206 (29) └┬─ Escherichia coli MS 107-1 └─ Escherichia coli (12-117/239) K12 (45)
| Putative HTH-type transcriptional regulator ypdC | (9) |
| Transcriptional regulator, AraC family | (9) |
| L-rhamnose operon regulatory protein RhaS | (8) |
| Right origin-binding protein | (7) |
| L-rhamnose operon transcriptional activator RhaR | (7) |
| Putative HTH-type transcriptional regulator ykgD | (5) |
| Transcriptional regulator YkgA | (5) |
| Chitobiose-specific regulator ChbR, AraC family | (5) |
| Regulatory protein SoxS | (3) |
| Hypothetical transcriptional regulator YqhC | (3) |
| Multiple antibiotic resistance protein MarA | (3) |
| Hypothetical transcriptional regulator yidL | (3) |
| Arabinose operon regulatory protein | (2) |
| regulatory protein for 2-phenylethylamine catabolism | (2) |
| Xylose activator XylR (AraC family) | (2) |
| Melibiose operon regulatory protein | (2) |
| Putative AraC-family transcriptional regulatory protein | (2) |
| putative AraC-like transcriptional regulator | (1) |
| Hypothetical transcriptional regulator ykgA | (1) |
| Transcriptional activator feaR | (1) |
| Others | (7) |