┌─ Escherichia coli (14-287/287) 042   
                                                               ├─ Escherichia coli (14-287/287) E24377A   
                                                               ├─ Escherichia coli (14-287/287) O157:H7   
                                                               ├─ Escherichia coli (12-285/285) str. K-12 substr. DH10B   
                                                               ├─ fig|6666666.5357.peg.2951 TY-2482 strain   
                                                               ├─ Escherichia coli 101-1   
                                                               ├─ Escherichia coli 1125A   
                                                               ├─ Escherichia coli 53638   
                                                               ├─ Escherichia coli 55989   
                                                               ├─ Escherichia coli ATCC 8739   
                                                               ├─ Escherichia coli B088   
                                                               ├─ Escherichia coli B354   
                                                               ├─ Escherichia coli BL21   
                                                               ├─ Escherichia coli BW2952   
                                                               ├─ Escherichia coli E110019   
                                                               ├─ Escherichia coli EC4100B   
                                                               ├─ Escherichia coli FVEC1302   
                                                               ├─ Escherichia coli H591   
                                                               ├─ Escherichia coli IAI1   
                                                               ├─ Escherichia coli KO11   
                                                               ├─ Escherichia coli MS 107-1   
                                                               ├─ Escherichia coli MS 116-1   
                                                               ├─ Escherichia coli MS 124-1   
                                                               ├─ Escherichia coli MS 146-1   
                                                               ├─ Escherichia coli MS 182-1   
                                                               ├─ Escherichia coli MS 196-1   
                                                               ├─ Escherichia coli MS 21-1   
                                                               ├─ Escherichia coli MS 78-1   
                                                               ├─ Escherichia coli O111:H- str. 11128   
                                                               ├─ Escherichia coli O157:H7 str. EC4024   
                                                               ├─ Escherichia coli O157:H7 str. EC4045   
                                                               ├─ Escherichia coli O157:H7 str. EC4113   
                                                               ├─ Escherichia coli O157:H7 str. EC4196   
                                                               ├─ Escherichia coli O157:H7 str. EC4401   
                                                               ├─ Escherichia coli O157:H7 str. EC4501   
                                                               ├─ Escherichia coli O157:H7 str. EC869   
                                                               ├─ Escherichia coli O157:H7 str. FRIK966   
                                                               ├─ Escherichia coli O157:H7 str. TW14359   
                                                               ├─ Escherichia coli O26:H11 str. 11368   
                                                               ├─ Escherichia coli SE11   
                                                               ├─ Escherichia coli TA143   
                                                               ├─ Escherichia coli TA280   
                                                               ├─ Escherichia coli W   
                                                               ├─ Escherichia coli W3110   
                                                               ├─ Escherichia coli str. K-12 substr. MG1655   
                                                               ├─ Escherichia coli (14-287/287) 53638   
                                                               ├─ Escherichia coli (14-287/287) E110019   
                                                              ┌┼─ Escherichia coli (14-287/287) HS   
                                                              │├─ Escherichia coli (14-287/287) ATCC 8739   
                                                              │├─ Escherichia coli str. K-12 substr. MG1655   
                                                              │├─ Escherichia coli str. K-12 substr. DH10B   
                                                              │├─ Escherichia coli W   
                                                              │├─ Escherichia coli UMN026   
                                                              │├─ Escherichia coli TA271   
                                                              │├─ Escherichia coli SMS-3-5   
                                                              │├─ Escherichia coli O55:H7 str. CB9615   
                                                              │├─ Escherichia coli O157:H7 str. TW14588   
                                                              │├─ Escherichia coli O157:H7 str. Sakai   
                                                              │├─ Escherichia coli O157:H7 str. FRIK2000   
                                                              │├─ Escherichia coli O157:H7 str. EC508   
                                                              │├─ Escherichia coli O157:H7 str. EC4486   
                                                              │├─ Escherichia coli O157:H7 str. EC4206   
                                                              │├─ Escherichia coli O157:H7 str. EC4115   
                                                              │├─ Escherichia coli O157:H7 str. EC4076   
                                                              │├─ Escherichia coli O157:H7 str. EC4042   
                                                              │├─ Escherichia coli O157:H7 EDL933   
                                                              │├─ Escherichia coli MS 84-1   
                                                              │├─ Escherichia coli MS 69-1   
                                                              │├─ Escherichia coli MS 198-1   
                                                              │├─ Escherichia coli MS 187-1   
                                                              │├─ Escherichia coli MS 175-1   
                                                              │├─ Escherichia coli MS 145-7   
                                                             ┌┤├─ Escherichia coli MS 119-7   
                                                             ││├─ Escherichia coli MS 115-1   
                                                             ││├─ Escherichia coli M718   
                                                             ││├─ Escherichia coli IAI1   
                                                             ││├─ Escherichia coli HS   
                                                             ││├─ Escherichia coli FVEC1412   
                                                             ││├─ Escherichia coli ETEC H10407   
                                                             ││├─ Escherichia coli E24377A   
                                                             ││├─ Escherichia coli DH1   
                                                             ││├─ Escherichia coli (DE3) BL21(DE3)   
                                                             ││├─ Escherichia coli B7A   
                                                             ││├─ Escherichia coli B185   
                                                             ││├─ Escherichia coli B str. REL606   
                                                             ││├─ Escherichia coli 55989   
                                                            ┌┤│├─ Escherichia coli 536A   
                                                            │││├─ Escherichia coli 1212A   
                                                            │││├─ Escherichia coli 1044A   
                                                            │││├─ Escherichia coli 042   
                                                            │││├─ fig|1040638.4.peg.1046 O104:H4 str. LB226692   
                                                            │││├─ Escherichia coli (14-287/287) O157:H7 EDL933   
                                                            │││├─ Escherichia coli (14-287/287) K12   
                                                            │││└─ Escherichia coli (14-287/287) B7A   
                                                            │││┌─ Escherichia coli E22   
                                                            │││├─ Escherichia coli (14-287/287) B171   
                                                            ││└┼─ Escherichia coli (14-287/287) E22   
                                                            ││ ├─ Escherichia coli O103:H2 str. 12009   
                                                           ┌┤│ └─ Escherichia coli B171   
                                                           ││└┬─ Escherichia coli H736   
                                                           ││ └┬─ Escherichia coli IAI39   
                                                           ││  └─ Escherichia coli IAI39   
                                                           ││ ┌─ Escherichia coli (14-287/287) F11   
                                                           ││ ├─ Escherichia coli 536   
                                                           ││┌┼─ Escherichia coli MS 200-1   
                                                           │││├─ Escherichia coli F11   
                                                           │││└─ Escherichia coli 536   
                                                           │││  ┌─ Escherichia coli (14-287/287) APEC O1   
                                                           │││  ├─ Escherichia coli IHE3034   
                                                           │││  ├─ Escherichia coli UM146   
                                                           │└┤ ┌┼─ Escherichia coli UTI89   
                                                           │ │ │├─ Escherichia coli UTI89   
                                                           │ │┌┤├─ Escherichia coli S88   
                                                           │ │││└─ Escherichia coli APEC O1   
                                                           │ ││└┬─ Escherichia coli ED1a   
                                                        ┌──┤ ││ └─ Escherichia coli ED1a   
                                                        │  │ ││┌─ Escherichia coli (14-287/287) E2348/69   
                                                        │  │ └┤├─ Escherichia coli 83972   
                                                        │  │  │├─ Escherichia coli CFT073   
                                                        │  │  │├─ Escherichia coli M605   
                                                        │  │  │├─ Escherichia coli MS 45-1   
                                                        │  │  │├─ Escherichia coli O127:H6 str. E2348/69   
                                                        │  │  │├─ Escherichia coli SE15   
                                                        │  │  └┼─ Escherichia coli WV_060327   
                                ┌───────────────────────┤  │   ├─ Escherichia coli TA206   
                                │                       │  │   ├─ Escherichia coli O83:H1 str. NRG 857C   
                                │                       │  │   ├─ Escherichia coli NC101   
                                │                       │  │   ├─ Escherichia coli MS 185-1   
                                │                       │  │   ├─ Escherichia coli H299   
                                │                       │  │   ├─ Escherichia coli ABU 83972   
┌───────────────────────────────┤                       │  │   ├─ Escherichia coli 2362-75   
│                               │                       │  │   └─ Escherichia coli (21-294/294) CFT073   
│                               │                       │  └─ Escherichia coli 1827-70   
│                               │                       └── Escherichia coli O157:H7 str. EC4024   
│                               │                                  ┌─ Escherichia coli (6-266/271) M605   
│                               │                                  │ ┌─ Escherichia coli (6-266/271) 53638   
│                               └──────────────────────────────────┤┌┴─ Escherichia coli (6-266/271) 042   
│                                                                  ││ ┌─ Escherichia coli (6-266/271) B171   
│                                                                  ││┌┴─ Escherichia coli (6-266/271) SE15   
│                                                                  └┤│┌─ Escherichia coli (6-266/271) ATCC 8739   
│                                                                   ││├─ Escherichia coli (6-266/271) E110019   
│                                                                   ││├─ Escherichia coli (6-266/271) E2348/69   
│                                                                   └┤├─ Escherichia coli (6-266/271) F11   
│                                                                    │├─ Escherichia coli (6-266/271) K12   
│                                                                    │├─ Escherichia coli (6-266/271) O157:H7   
│                                                                    │├─ Escherichia coli (6-266/271) O157:H7 str. EC4486   
│                                                                    └┼─ Escherichia coli (6-266/271) str. K-12 substr. DH10B   
│                                                                     ├─ Escherichia coli (6-266/271) W3110   
│                                                                     ├─ Escherichia coli (6-266/271) O157:H7 EDL933   
│                                                                     ├─ Escherichia coli (6-266/271) O127:H6 str. E2348/69   
│                                                                     ├─ Escherichia coli (6-266/271) HS   
│                                                                     ├─ Escherichia coli (6-266/271) E24377A   
│                                                                     ├─ Escherichia coli (6-266/271) E22   
│                                                                     ├─ Escherichia coli (6-266/271) CFT073   
│                                                                     └─ Escherichia coli (6-266/271) APEC O1   
│                                                          ┌─ Escherichia coli (4-246/255) 101-1   
│                                                          ├─ Escherichia coli (4-246/255) 536   
│                                                          ├─ Escherichia coli (4-246/255) B str. REL606   
│                                                          ├─ Escherichia coli (DE3 4-246/255) BL21(DE3)   
│                                                          ├─ Escherichia coli (4-246/255) ED1a   
│                                                          ├─ Escherichia coli (4-246/255) H299   
│                                                          ├─ Escherichia coli (4-246/255) IAI39   
┤                                                          ├─ Escherichia coli (4-246/255) MS 187-1   
│                                                          ├─ Escherichia coli (4-246/255) NC101   
│                                                          ├─ Escherichia coli (4-246/255) S88   
│                                                          ├─ Escherichia coli (4-246/255) SMS-3-5   
│                                                          ├─ Escherichia coli (4-246/255) UTI89   
│                                                         ┌┼─ Escherichia coli (4-246/255) UTI89   
│                                                         │├─ Escherichia coli (4-246/255) UM146   
│                                                         │├─ Escherichia coli (4-246/255) SE15   
│                                                         │├─ Escherichia coli (4-246/255) O83:H1 str. NRG 857C   
│                                                         │├─ Escherichia coli (4-246/255) MS 200-1   
│                                                         │├─ Escherichia coli (4-246/255) IHE3034   
│                                                         │├─ Escherichia coli (4-246/255) IAI39   
│                                                        ┌┤├─ Escherichia coli (4-246/255) F11   
│                                                        ││├─ Escherichia coli (4-246/255) ED1a   
│                                                        ││├─ Escherichia coli (4-246/255) BL21   
│                                                        ││├─ Escherichia coli (4-246/255) APEC O1   
│                                                        ││└─ Escherichia coli (4-246/255) 536   
│                                                        ││ ┌─ Escherichia coli (28-275/284) APEC O1   
│                                                        ││┌┴─ Escherichia coli (28-275/284) F11   
│     ┌──────────────────────────────────────────────────┤└┤┌─ Escherichia coli (28-275/284) CFT073   
│     │                                                  │ └┤┌─ Escherichia coli (4-246/255) ABU 83972   
│     │                                                  │  │├─ Escherichia coli (4-246/255) MS 185-1   
│     │                                                  │  └┼─ Escherichia coli (4-246/255) MS 45-1   
│     │                                                  │   ├─ Escherichia coli (4-246/255) CFT073   
│     │                                                  │   └─ Escherichia coli (4-246/255) 83972   
│     │                                                  └┬─ Escherichia coli (4-246/255) M605   
│     │                                                   └─ Escherichia coli (4-246/255) MS 21-1   
│     │                                                        ┌─ Escherichia coli (4-250/260) 536   
│     │                                                        ├─ Escherichia coli (4-250/260) 83972   
│     │                                                        ├─ Escherichia coli (4-250/260) CFT073   
│     │                                                        ├─ Escherichia coli (4-250/260) F11   
│     │                                                        ├─ Escherichia coli (4-250/260) MS 185-1   
└─────┤                                                        ├─ Escherichia coli (4-250/260) MS 45-1   
      │                                                       ┌┼─ Escherichia coli (4-250/260) O83:H1 str. NRG 857C   
      │                                                       │├─ Escherichia coli (4-250/260) MS 200-1   
      │                                                       │├─ Escherichia coli (4-250/260) F11   
      │                                                       │├─ Escherichia coli (4-250/260) CFT073   
      │                                                       │├─ Escherichia coli (4-250/260) ABU 83972   
      │                                                      ┌┤└─ Escherichia coli (4-250/260) 536   
      │                                                      ││┌─ Escherichia coli (4-250/260) APEC O1   
      │                                                      ││├─ Escherichia coli (4-250/260) NC101   
      │                                                      ││├─ Escherichia coli (4-250/260) UM146   
      │                                                      │└┼─ Escherichia coli (4-250/260) UTI89   
      │                                                      │ ├─ Escherichia coli (4-250/260) UTI89   
      │                                                      │ ├─ Escherichia coli (4-250/260) S88   
      └──────────────────────────────────────────────────────┤ ├─ Escherichia coli (4-250/260) IHE3034   
                                                             │ └─ Escherichia coli (4-250/260) APEC O1   
                                                             │┌─ Escherichia coli (4-250/260) TA206   
                                                             ││   ┌─ Escherichia coli (4-250/260) 2362-75   
                                                             ││   ├─ Escherichia coli (4-250/260) O127:H6 str. E2348/69   
                                                             ││  ┌┼─ Escherichia coli (4-250/260) WV_060327   
                                                             ││ ┌┤└─ Escherichia coli (4-250/260) E2348/69   
                                                             └┤ │└┬─ Escherichia coli (4-250/260) SE15   
                                                              │┌┤ └─ Escherichia coli (4-250/260) M605   
                                                              ││└┬─ Escherichia coli (4-250/260) ED1a   
                                                              ││ └─ Escherichia coli (4-250/260) ED1a   
                                                              ││┌─ Escherichia coli (4-250/260) MS 115-1   
                                                              └┤│┌─ Escherichia coli (4-250/260) ETEC H10407   
                                                               │││  ┌─ Escherichia coli (4-250/260) 101-1   
                                                               │││  ├─ Escherichia coli (4-250/260) 53638   
                                                               │││  ├─ Escherichia coli (4-250/260) ATCC 8739   
                                                               │││  ├─ Escherichia coli (4-250/260) BL21   
                                                               └┤│  ├─ Escherichia coli (4-250/260) BW2952   
                                                                ││  ├─ Escherichia coli (4-250/260) H736   
                                                                ││  ├─ Escherichia coli (4-250/260) HS   
                                                                ││  ├─ Escherichia coli (4-250/260) MS 146-1   
                                                                ││  ├─ Escherichia coli (4-250/260) MS 196-1   
                                                                ││  ├─ Escherichia coli (4-250/260) W3110   
                                                                └┤  ├─ Escherichia coli (4-250/260) str. K-12 substr. DH10B   
                                                                 │ ┌┼─ Escherichia coli (4-250/260) str. K-12 substr. MG1655   
                                                                 │ │├─ Escherichia coli (4-250/260) str. K-12 substr. MG1655   
                                                                 │ │├─ Escherichia coli (4-250/260) str. K-12 substr. DH10B   
                                                                 │ │├─ Escherichia coli (4-250/260) OP50   
                                                                 │ │├─ Escherichia coli (4-250/260) MS 187-1   
                                                                 │ │├─ Escherichia coli (4-250/260) K12   
                                                                 │┌┤├─ Escherichia coli (4-250/260) HS   
                                                                 │││├─ Escherichia coli (4-250/260) DH1   
                                                                 │││├─ Escherichia coli (DE3 4-250/260) BL21(DE3)   
                                                                 │││├─ Escherichia coli (4-250/260) B str. REL606   
                                                                 │││├─ Escherichia coli (4-250/260) ATCC 8739   
                                                                 └┤│└─ Escherichia coli (4-250/260) 53638   
                                                                  │└─ Escherichia coli (4-250/260) 1827-70   
                                                                  │ ┌─ Escherichia coli (4-250/260) IAI39   
                                                                  │┌┼─ Escherichia coli (4-250/260) MS 21-1   
                                                                  ││└─ Escherichia coli (4-250/260) IAI39   
                                                                  └┤ ┌─ Escherichia coli (4-250/260) B354   
                                                                   │┌┼─ Escherichia coli (4-250/260) TA280   
                                                                   ││└─ Escherichia coli (4-250/260) MS 69-1   
                                                                   └┤┌─ Escherichia coli (4-250/260) M718   
                                                                    ││┌─ Escherichia coli (4-250/260) B185   
                                                                    │││┌─ Escherichia coli (4-250/260) 1125A   
                                                                    └┤│├─ Escherichia coli (4-250/260) 536A   
                                                                     ││├─ Escherichia coli (4-250/260) O157:H7 EDL933   
                                                                     ││├─ Escherichia coli (4-250/260) O157:H7 str. EC4024   
                                                                     ││├─ Escherichia coli (4-250/260) O157:H7 str. EC4045   
                                                                     └┤├─ Escherichia coli (4-250/260) O157:H7 str. EC4113   
                                                                      │├─ Escherichia coli (4-250/260) O157:H7 str. EC4196   
                                                                      │├─ Escherichia coli (4-250/260) O157:H7 str. EC4401   
                                                                      │├─ Escherichia coli (4-250/260) O157:H7 str. EC4501   
                                                                      │├─ Escherichia coli (4-250/260) O157:H7 str. EC869   
                                                                      │├─ Escherichia coli (4-250/260) O157:H7 str. FRIK966   
                                                                      │├─ Escherichia coli (4-250/260) O157:H7 str. TW14359   
                                                                      └┼─ Escherichia coli (4-250/260) O55:H7 str. CB9615   
                                                                       ├─ Escherichia coli (4-250/260) O157:H7 str. TW14588   
                                                                       ├─ Escherichia coli (4-250/260) O157:H7 str. Sakai   
                                                                       ├─ Escherichia coli (4-250/260) O157:H7 str. FRIK2000   
                                                                       ├─ Escherichia coli (4-250/260) O157:H7 str. EC508   
                                                                       ├─ Escherichia coli (4-250/260) O157:H7 str. EC4486   
                                                                       ├─ Escherichia coli (4-250/260) O157:H7 str. EC4206   
                                                                       ├─ Escherichia coli (4-250/260) O157:H7 str. EC4115   
                                                                       ├─ Escherichia coli (4-250/260) O157:H7 str. EC4076   
                                                                       ├─ Escherichia coli (4-250/260) O157:H7 str. EC4042   
                                                                       ├─ Escherichia coli (4-250/260) O157:H7 EDL933   
                                                                       ├─ Escherichia coli (4-250/260) O157:H7   
                                                                       ├─ Escherichia coli (4-250/260) 1212A   
                                                                       └─ Escherichia coli (4-250/260) 1044A   
  
Acetate operon repressor (132)
Uncharacterized transcriptional regulator YfaX, HTH-type (89)
D-galactonate regulator, IclR family (34)
Negative regulator of allantoin and glyoxylate utilization operons (21)
Others (2)