┌─ Escherichia coli (1-434/444) 101-1   
                                  ├─ Escherichia coli (1-434/444) 1125A   
                                  ├─ Escherichia coli (1-434/444) 1827-70   
                                  ├─ Escherichia coli (1-434/444) 53638   
                                  ├─ Escherichia coli (1-434/444) ATCC 8739   
                                  ├─ Escherichia coli (1-434/444) B str. REL606   
                                  ├─ Escherichia coli (DE3 1-434/444) BL21(DE3)   
                                  ├─ Escherichia coli (1-434/444) DH1   
                                  ├─ Escherichia coli (1-434/444) E110019   
                                  ├─ Escherichia coli (1-434/444) K12   
                                  ├─ Escherichia coli (1-434/444) MS 116-1   
                                  ├─ Escherichia coli (1-434/444) MS 146-1   
                                  ├─ Escherichia coli (1-434/444) MS 196-1   
                                  ├─ Escherichia coli (1-434/444) O157:H7   
                                  ├─ Escherichia coli (1-434/444) O157:H7 EDL933   
                                  ├─ Escherichia coli (1-434/444) O157:H7 str. EC4042   
                                  ├─ Escherichia coli (1-434/444) O157:H7 str. EC4076   
                                  ├─ Escherichia coli (1-434/444) O157:H7 str. EC4115   
                                  ├─ Escherichia coli (1-434/444) O157:H7 str. EC4206   
                                  ├─ Escherichia coli (1-434/444) O157:H7 str. EC4486   
                                  ├─ Escherichia coli (1-434/444) O157:H7 str. EC508   
                                  ├─ Escherichia coli (1-434/444) O157:H7 str. FRIK2000   
                                  ├─ Escherichia coli (1-434/444) O157:H7 str. Sakai   
                                  ├─ Escherichia coli (1-434/444) O157:H7 str. TW14588   
                                  ├─ Escherichia coli (1-434/444) W3110   
                                  ├─ Escherichia coli (1-434/444) str. K-12 substr. MG1655   
                                 ┌┼─ Escherichia coli (1-434/444) str. K-12 substr. MG1655   
                                 │├─ Escherichia coli (1-434/444) str. K-12 substr. DH10B   
                                 │├─ Escherichia coli (1-434/444) O55:H7 str. CB9615   
                                 │├─ Escherichia coli (1-434/444) O157:H7 str. TW14359   
                                 │├─ Escherichia coli (1-434/444) O157:H7 str. FRIK966   
                                 │├─ Escherichia coli (1-434/444) O157:H7 str. EC869   
                                 │├─ Escherichia coli (1-434/444) O157:H7 str. EC4501   
                                 │├─ Escherichia coli (1-434/444) O157:H7 str. EC4401   
                                 │├─ Escherichia coli (1-434/444) O157:H7 str. EC4196   
                                 │├─ Escherichia coli (1-434/444) O157:H7 str. EC4113   
                                 │├─ Escherichia coli (1-434/444) O157:H7 str. EC4045   
                                 │├─ Escherichia coli (1-434/444) O157:H7 str. EC4024   
                                 │├─ Escherichia coli (1-434/444) O157:H7 EDL933   
                                ┌┤├─ Escherichia coli (1-434/444) MS 84-1   
                                ││├─ Escherichia coli (1-434/444) MS 187-1   
                                ││├─ Escherichia coli (1-434/444) MS 124-1   
                                ││├─ Escherichia coli (1-434/444) M718   
                                ││├─ Escherichia coli (1-434/444) H736   
                                ││├─ Escherichia coli (1-434/444) E110019   
                                ││├─ Escherichia coli (1-434/444) BW2952   
                                ││├─ Escherichia coli (1-434/444) BL21   
                                ││├─ Escherichia coli (1-434/444) ATCC 8739   
                                ││├─ Escherichia coli (1-434/444) 536A   
                                ││├─ Escherichia coli (1-434/444) 53638   
                                ││├─ Escherichia coli (1-434/444) 1212A   
                                ││└─ Escherichia coli (1-434/444) 1044A   
                                │└─ Escherichia coli (1-434/444) MS 115-1   
                                │┌─ Escherichia coli (1-434/459) B7A   
                                │├─ fig|6666666.5357.peg.2622 TY-2482 (1-434/444) strain   
                                │├─ Escherichia coli (1-434/444) 2362-75   
                                │├─ Escherichia coli (1-434/444) 55989   
                                │├─ Escherichia coli (1-434/444) B171   
                                │├─ Escherichia coli (1-434/444) B7A   
                               ┌┤├─ Escherichia coli (1-434/444) E22   
                               ││├─ Escherichia coli (1-434/444) E24377A   
                               ││├─ Escherichia coli (1-434/444) ETEC H10407   
                               ││├─ Escherichia coli (1-434/444) FVEC1412   
                               ││├─ Escherichia coli (1-434/444) H591   
                               ││├─ Escherichia coli (1-434/444) HS   
                               ││├─ Escherichia coli (1-434/444) IAI1   
                               ││├─ Escherichia coli (1-434/444) M605   
                               ││├─ Escherichia coli (1-434/444) MS 119-7   
                               ││├─ Escherichia coli (1-434/444) MS 182-1   
                               ││├─ Escherichia coli (1-434/444) MS 21-1   
                               ││├─ Escherichia coli (1-434/444) O103:H2 str. 12009   
                               ││├─ Escherichia coli (1-434/444) O26:H11 str. 11368   
                               ││├─ Escherichia coli (1-434/444) SE11   
                               ││├─ Escherichia coli (1-434/444) SMS-3-5   
                               ││├─ Escherichia coli (1-434/444) TA271   
                               ││├─ Escherichia coli (1-434/444) UMN026   
                               ││├─ Escherichia coli (1-434/444) W   
                               ││├─ Escherichia coli (14-447/457) 042   
                               │└┼─ Escherichia coli (14-447/457) E2348/69   
                               │ ├─ Escherichia coli (1-434/444) WV_060327   
                               │ ├─ Escherichia coli (1-434/444) W   
                               │ ├─ Escherichia coli (1-434/444) TA280   
                              ┌┤ ├─ Escherichia coli (1-434/444) TA143   
                              ││ ├─ Escherichia coli (1-434/444) SE15   
                              ││ ├─ Escherichia coli (1-434/444) O83:H1 str. NRG 857C   
                              ││ ├─ Escherichia coli (1-434/444) O111:H- str. 11128   
                              ││ ├─ Escherichia coli (1-434/444) MS 78-1   
                              ││ ├─ Escherichia coli (1-434/444) MS 198-1   
                              ││ ├─ Escherichia coli (1-434/444) MS 145-7   
                              ││ ├─ Escherichia coli (1-434/444) MS 107-1   
                              ││ ├─ Escherichia coli (1-434/444) KO11   
                              ││ ├─ Escherichia coli (1-434/444) IAI1   
                              ││ ├─ Escherichia coli (1-434/444) HS   
                              ││ ├─ Escherichia coli (1-434/444) H299   
                              ││ ├─ Escherichia coli (1-434/444) FVEC1302   
                             ┌┤│ ├─ Escherichia coli (1-434/444) EC4100B   
                             │││ ├─ Escherichia coli (1-434/444) E24377A   
                             │││ ├─ Escherichia coli (1-434/444) E22   
                             │││ ├─ Escherichia coli (1-434/444) B354   
                             │││ ├─ Escherichia coli (1-434/444) B171   
                             │││ ├─ Escherichia coli (1-434/444) 55989   
                             │││ ├─ Escherichia coli (1-434/444) 042   
                             │││ ├─ fig|1040638.4.peg.2984 O104:H4 (1-434/444) str. LB226692   
                             │││ └─ Escherichia coli (1-434/459) B7A   
                            ┌┤│└┬─ Escherichia coli (1-434/444) B185   
                            │││ └┬─ Escherichia coli (1-434/444) MS 69-1   
                            │││  └─ Escherichia coli (1-425/435) B088   
                            ││└┬─ Escherichia coli (1-434/444) IAI39   
                            ││ └─ Escherichia coli (1-434/444) IAI39   
                            ││ ┌─ Escherichia coli (1-434/444) UTI89   
                            ││┌┴─ Escherichia coli (1-434/444) UTI89   
                            │││┌─ Escherichia coli (1-434/444) IHE3034   
                            │└┤│┌─ Escherichia coli (1-434/444) ABU 83972   
                            │ ││├─ Escherichia coli (14-447/457) APEC O1   
                           ┌┤ └┤├─ Escherichia coli (1-434/444) CFT073   
                           ││  │├─ Escherichia coli (1-434/444) MS 45-1   
                           ││  │├─ Escherichia coli (1-434/444) S88   
                           ││  └┼─ Escherichia coli (1-434/444) UM146   
                           ││   ├─ Escherichia coli (1-434/444) NC101   
                           ││   ├─ Escherichia coli (1-434/444) MS 185-1   
                          ┌┤│   ├─ Escherichia coli (14-447/457) CFT073   
                          │││   ├─ Escherichia coli (1-434/444) APEC O1   
                          │││   └─ Escherichia coli (1-434/444) 83972   
                          ││└─ Escherichia coli (1-434/444) TA206   
                          ││┌─ Escherichia coli (1-434/444) 536   
 ┌────────────────────────┤│├─ Escherichia coli (1-434/444) F11   
 │                        │└┼─ Escherichia coli (1-434/444) MS 200-1   
 │                        │ ├─ Escherichia coli (1-434/444) F11   
 │                        │ └─ Escherichia coli (1-434/444) 536   
┌┤                        └┬─ Escherichia coli (1-434/444) ED1a   
││                         └─ Escherichia coli (1-434/444) ED1a   
││                                                                   ┌─ Escherichia coli (4-408/418) 53638   
││                                                                  ┌┴─ Escherichia coli (1-405/415) 53638   
│└──────────────────────────────────────────────────────────────────┤┌─ Escherichia coli (1-405/415) NC101   
│                                                                   ││ ┌─ Escherichia coli (1-405/415) APEC O1   
│                                                                   └┤ ├─ Escherichia coli (4-408/418) CFT073   
│                                                                    │┌┼─ Escherichia coli (1-405/415) S88   
│                                                                    ││├─ Escherichia coli (1-405/415) CFT073   
│                                                                    └┤└─ Escherichia coli (4-408/418) APEC O1   
│                                                                     │┌─ Escherichia coli (1-405/415) MS 200-1   
│                                                                     ││ ┌─ Escherichia coli (1-405/415) H299   
│                                                                     └┤ ├─ Escherichia coli (1-405/415) MS 182-1   
│                                                                      │┌┼─ Escherichia coli (1-405/415) MS 84-1   
│                                                                      └┤└─ Escherichia coli (1-405/415) MS 124-1   
│                                                                       │┌─ Escherichia coli (1-405/415) MS 107-1   
│                                                                       └┤┌─ Escherichia coli (1-405/415) 536   
│                                                                        └┼─ Escherichia coli (1-405/415) F11   
│                                                                         ├─ Escherichia coli (4-408/418) F11   
│                                                                         └─ Escherichia coli (1-405/415) 536   
│                            ┌─ Escherichia coli 1044A   
│                            ├─ Escherichia coli O157:H7   
│                            ├─ Escherichia coli O157:H7 str. EC4024   
│                            ├─ Escherichia coli O157:H7 str. EC4045   
│                            ├─ Escherichia coli O157:H7 str. EC4113   
│                            ├─ Escherichia coli O157:H7 str. EC4196   
│                            ├─ Escherichia coli O157:H7 str. EC4401   
│                            ├─ Escherichia coli O157:H7 str. EC4501   
│                            ├─ Escherichia coli O157:H7 str. EC869   
│                            ├─ Escherichia coli O157:H7 str. FRIK966   
│                            ├─ Escherichia coli O157:H7 str. TW14359   
│                           ┌┼─ Escherichia coli O157:H7 str. TW14588   
│                           │├─ Escherichia coli O157:H7 str. Sakai   
│                           │├─ Escherichia coli O157:H7 str. FRIK2000   
│                           │├─ Escherichia coli O157:H7 str. EC508   
│                           │├─ Escherichia coli O157:H7 str. EC4486   
│                           │├─ Escherichia coli O157:H7 str. EC4206   
│                          ┌┤├─ Escherichia coli O157:H7 str. EC4115   
│                          ││├─ Escherichia coli O157:H7 str. EC4076   
│                          ││├─ Escherichia coli O157:H7 str. EC4042   
│                          ││├─ Escherichia coli O157:H7 EDL933   
│                         ┌┤│└─ Escherichia coli 1125A   
│                         ││└┬─ Escherichia coli 536A   
│                        ┌┤│ └─ Escherichia coli 1212A   
│                        ││└─ Escherichia coli O157:H7 EDL933   
│                       ┌┤└─ Escherichia coli O55:H7 str. CB9615   
│                       │└─ Escherichia coli MS 115-1   
│                       │┌─ Escherichia coli ATCC 8739   
│                      ┌┤├─ Escherichia coli B str. REL606   
│                      ││├─ Escherichia coli (DE3) BL21(DE3)   
│                      │└┼─ Escherichia coli MS 187-1   
│                      │ ├─ Escherichia coli ETEC H10407   
│                      │ ├─ Escherichia coli BL21   
│                      │ ├─ Escherichia coli ATCC 8739   
│                     ┌┤ └─ Escherichia coli 101-1   
│                     ││ ┌─ Escherichia coli 53638   
│                     ││┌┴─ Escherichia coli 53638   
│                     │││┌─ Escherichia coli BW2952   
│                     │││├─ Escherichia coli H736   
│                     │└┤├─ Escherichia coli MS 116-1   
│                     │ │├─ Escherichia coli MS 175-1   
│                     │ │├─ Escherichia coli W3110   
│                     │ │├─ Escherichia coli str. K-12 substr. DH10B   
│                     │ └┼─ Escherichia coli str. K-12 substr. MG1655   
│                     │  ├─ Escherichia coli str. K-12 substr. MG1655   
│                     │  ├─ Escherichia coli str. K-12 substr. DH10B   
│                     │  ├─ Escherichia coli MS 196-1   
│                     │  ├─ Escherichia coli MS 146-1   
│                     │  ├─ Escherichia coli K12   
│                     │  ├─ Escherichia coli DH1   
│                    ┌┤  └─ Escherichia coli 1827-70   
│                    ││  ┌─ Escherichia coli B7A   
│                    ││  ├─ Escherichia coli H591   
│                    ││  ├─ Escherichia coli MS 119-7   
│                    ││  ├─ Escherichia coli MS 145-7   
│                    ││  ├─ Escherichia coli W   
│                    ││ ┌┼─ Escherichia coli W   
│                    ││ │├─ Escherichia coli MS 84-1   
│                    ││ │├─ Escherichia coli MS 124-1   
┤                    ││┌┤├─ Escherichia coli KO11   
│                    ││││└─ Escherichia coli B7A   
│                    ││││┌─ Escherichia coli E24377A   
│                    │││└┼─ Escherichia coli MS 78-1   
│                    │││ ├─ Escherichia coli MS 182-1   
│                    │││ └─ Escherichia coli E24377A   
│                    │└┤    ┌─ Escherichia coli HS   
│                    │ │   ┌┴─ Escherichia coli HS   
│                   ┌┤ │  ┌┴─ Escherichia coli SE11   
│                   ││ │ ┌┴─ Escherichia coli TA271   
│                   ││ │┌┴┬─ Escherichia coli M718   
│                   ││ ││ └─ Escherichia coli B185   
│                   ││ └┤┌─ Escherichia coli EC4100B   
│                   ││  ││┌─ Escherichia coli B171   
│                   ││  └┤├─ Escherichia coli E22   
│                   ││   │├─ Escherichia coli IAI1   
│                   ││   │├─ Escherichia coli MS 107-1   
│                   ││   └┼─ Escherichia coli O103:H2 str. 12009   
│                   ││    ├─ Escherichia coli IAI1   
│                   ││    ├─ Escherichia coli E22   
│                   ││    ├─ Escherichia coli B171   
│     ┌─────────────┤│    └─ Escherichia coli B088   
│     │             ││ ┌─ Escherichia coli E110019   
│     │             ││┌┴─ Escherichia coli E110019   
│     │             │└┤ ┌─ Escherichia coli O111:H- str. 11128   
│     │             │ │┌┴─ Escherichia coli O26:H11 str. 11368   
│     │             │ └┤┌─ fig|6666666.5357.peg.3452 TY-2482 strain   
│     │             │  └┼─ Escherichia coli 55989   
│     │             │   ├─ Escherichia coli 55989   
│     │             │   └─ fig|1040638.4.peg.1034 O104:H4 str. LB226692   
│     │             │ ┌─ Escherichia coli 042   
│     │             │┌┴─ Escherichia coli 042   
│     │             ││┌─ Escherichia coli TA280   
│     │             └┤│┌─ Escherichia coli H299   
│     │              │││   ┌─ Escherichia coli IAI39   
│     │              └┤│  ┌┴─ Escherichia coli IAI39   
│     │               ││ ┌┴─ Escherichia coli SMS-3-5   
│     │               ││┌┴─ Escherichia coli M605   
│     │               └┤│   ┌─ Escherichia coli FVEC1302   
│     │                ││   ├─ Escherichia coli MS 198-1   
│     │                ││  ┌┼─ Escherichia coli UMN026   
│     │                ││  │├─ Escherichia coli TA143   
│     │                ││ ┌┤└─ Escherichia coli FVEC1412   
│     │                └┤┌┤└─ Escherichia coli MS 69-1   
│     │                 ││└─ Escherichia coli B354   
│     │                 ││   ┌─ Escherichia coli APEC O1   
│     │                 ││   ├─ Escherichia coli IHE3034   
│     │                 ││  ┌┼─ Escherichia coli S88   
│     │                 ││ ┌┤└─ Escherichia coli APEC O1   
│     │                 └┤ │└┬─ Escherichia coli TA206   
│     │                  │┌┤ └─ Escherichia coli O83:H1 str. NRG 857C   
│     │                  │││┌─ Escherichia coli SE15   
│     │                  ││└┤┌─ Escherichia coli WV_060327   
│     │                  ││ └┤┌─ Escherichia coli E2348/69   
│     │                  ││  └┼─ Escherichia coli O127:H6 str. E2348/69   
│     │                  └┤   └─ Escherichia coli 2362-75   
│     │                   │  ┌─ Escherichia coli 83972   
│     │                   │ ┌┴─ Escherichia coli ABU 83972   
│     │                   │┌┴┬─ Escherichia coli ED1a   
│     │                   ││ └─ Escherichia coli ED1a   
│     │                   └┤┌─ Escherichia coli 536   
│     │                    │├─ Escherichia coli CFT073   
│     │                    │├─ Escherichia coli F11   
│     │                    └┼─ Escherichia coli NC101   
│     │                     ├─ Escherichia coli MS 200-1   
│     │                     ├─ Escherichia coli F11   
│     │                     ├─ Escherichia coli CFT073   
│     │                     └─ Escherichia coli 536   
│     │                           ┌─ Escherichia coli (7-451/461) 1827-70   
│     │                           ├─ Escherichia coli (7-451/461) 53638   
│     │                           ├─ Escherichia coli (7-451/461) BL21   
│     │                           ├─ Escherichia coli (7-451/461) BW2952   
│     │                           ├─ Escherichia coli (7-451/461) EC4100B   
│     │                           ├─ Escherichia coli (7-451/461) H736   
│     │                           ├─ Escherichia coli (7-451/461) HS   
│     │                           ├─ Escherichia coli (7-451/461) MS 116-1   
│     │                           ├─ Escherichia coli (7-451/461) MS 146-1   
│     │                           ├─ Escherichia coli (7-451/461) MS 196-1   
│     │                           ├─ Escherichia coli (7-451/461) W3110   
└─────┤                           ├─ Escherichia coli (7-451/461) str. K-12 substr. DH10B   
      │                          ┌┼─ Escherichia coli (7-451/461) str. K-12 substr. MG1655   
      │                          │├─ Escherichia coli (7-451/461) str. K-12 substr. MG1655   
      │                          │├─ Escherichia coli (7-451/461) str. K-12 substr. DH10B   
      │                          │├─ Escherichia coli (7-451/461) MS 84-1   
      │                          │├─ Escherichia coli (7-451/461) MS 187-1   
      │                          │├─ Escherichia coli (7-451/461) MS 124-1   
      │                          │├─ Escherichia coli (7-451/461) K12   
      │                         ┌┤├─ Escherichia coli (7-451/461) HS   
      │                         ││├─ Escherichia coli (7-451/461) ETEC H10407   
      │                         ││├─ Escherichia coli (7-451/461) DH1   
      │                         ││├─ Escherichia coli (DE3 7-451/461) BL21(DE3)   
      │                         ││├─ Escherichia coli (7-451/461) B str. REL606   
      │                         ││└─ Escherichia coli (7-451/461) 53638   
      │                         ││┌─ Escherichia coli (7-451/461) B354   
      │                        ┌┤└┤ ┌─ Escherichia coli (7-451/461) 042   
      │                        ││ │┌┼─ Escherichia coli (7-451/461) TA143   
      │                        ││ └┤└─ Escherichia coli (7-451/461) 042   
      │                        ││  │┌─ Escherichia coli (7-451/461) FVEC1412   
      │                        ││  └┼─ Escherichia coli (7-451/461) UMN026   
      │                        ││   ├─ Escherichia coli (7-451/461) MS 198-1   
      │                        ││   └─ Escherichia coli (7-451/461) FVEC1302   
      │                        │└┬─ Escherichia coli (7-451/461) ATCC 8739   
      │                        │ └─ Escherichia coli (7-451/461) ATCC 8739   
      │                       ┌┤   ┌─ Escherichia coli (7-451/461) IAI39   
      │                       ││  ┌┼─ Escherichia coli (7-451/461) M718   
      │                       ││ ┌┤└─ Escherichia coli (7-451/461) IAI39   
      │                       ││┌┤└─ Escherichia coli (7-451/461) H299   
      │                       │││└┬─ Escherichia coli (7-451/461) E2348/69   
      │                       │││ └┬─ Escherichia coli (7-451/461) 2362-75   
      │                       │││  └─ Escherichia coli (7-451/461) O127:H6 str. E2348/69   
      │                       │││┌─ Escherichia coli (7-451/461) SMS-3-5   
      │                       │└┤│┌─ Escherichia coli (7-451/461) 536   
      │                       │ ││├─ Escherichia coli (7-451/461) ABU 83972   
      │                       │ ││├─ Escherichia coli (7-451/461) APEC O1   
      │                       │ ││├─ Escherichia coli (7-451/461) CFT073   
      │                       │ ││├─ Escherichia coli (7-451/461) ED1a   
      │                       │ └┤├─ Escherichia coli (7-451/461) F11   
      │                       │  │├─ Escherichia coli (7-451/461) MS 185-1   
      │                       │  │├─ Escherichia coli (7-451/461) MS 21-1   
      │                       │  │├─ Escherichia coli (7-451/461) MS 69-1   
      │     ┌─────────────────┤  │├─ Escherichia coli (7-451/461) O83:H1 str. NRG 857C   
      │     │                 │  │├─ Escherichia coli (7-451/461) TA206   
      │     │                 │  │├─ Escherichia coli (7-451/461) UTI89   
      │     │                 │  └┼─ Escherichia coli (7-451/461) UTI89   
      │     │                 │   ├─ Escherichia coli (7-451/461) UM146   
      │     │                 │   ├─ Escherichia coli (7-451/461) S88   
      │     │                 │   ├─ Escherichia coli (7-451/461) NC101   
      │     │                 │   ├─ Escherichia coli (7-451/461) MS 45-1   
      │     │                 │   ├─ Escherichia coli (7-451/461) MS 200-1   
      │     │                 │   ├─ Escherichia coli (7-451/461) IHE3034   
      │     │                 │   ├─ Escherichia coli (7-451/461) F11   
      │     │                 │   ├─ Escherichia coli (7-451/461) ED1a   
      │     │                 │   ├─ Escherichia coli (7-451/461) CFT073   
      │     │                 │   ├─ Escherichia coli (7-451/461) APEC O1   
      │     │                 │   ├─ Escherichia coli (7-451/461) 83972   
      │     │                 │   └─ Escherichia coli (7-451/461) 536   
      │     │                 └┬─ Escherichia coli (7-451/461) SE15   
      └─────┤                  └─ Escherichia coli (7-451/461) M605   
            │                          ┌─ Escherichia coli (6-453/461) EC4100B   
            │                          │ ┌─ Escherichia coli (6-463/469) O157:H7 EDL933   
            │                          │┌┴─ Escherichia coli (9-466/472) O157:H7 EDL933   
            │                          ││  ┌─ Escherichia coli (9-466/472) 1044A   
            │                          ││  ├─ Escherichia coli (9-466/472) 1212A   
            │                          ││  ├─ Escherichia coli (9-466/472) B185   
            │                          ││  ├─ Escherichia coli (9-466/472) BW2952   
            │                          ││  ├─ Escherichia coli (6-463/469) E110019   
            │                          ││  ├─ Escherichia coli (9-466/472) ETEC H10407   
            │                          ││  ├─ Escherichia coli (6-463/469) H591   
            │                          ││  ├─ Escherichia coli (6-463/469) K12   
            │                          ││  ├─ Escherichia coli (9-466/472) MS 107-1   
            │                          ││  ├─ Escherichia coli (9-466/472) MS 119-7   
            │                          ││  ├─ Escherichia coli (9-466/472) MS 175-1   
            │                          ││  ├─ Escherichia coli (9-466/472) MS 21-1   
            │                          ││  ├─ Escherichia coli (6-463/469) O157:H7   
            │                          ││  ├─ Escherichia coli (9-466/472) O157:H7 str. EC4042   
            └──────────────────────────┤│  ├─ Escherichia coli (6-463/469) O157:H7 str. EC4076   
                                       ││  ├─ Escherichia coli (9-466/472) O157:H7 str. EC4115   
                                       ││  ├─ Escherichia coli (9-466/472) O157:H7 str. EC4206   
                                       ││  ├─ Escherichia coli (9-466/472) O157:H7 str. EC4501   
                                       ││  ├─ Escherichia coli (9-466/472) O157:H7 str. EC869   
                                       ││  ├─ Escherichia coli (6-463/469) O157:H7 str. FRIK966   
                                       ││  ├─ Escherichia coli (9-466/472) O157:H7 str. TW14359   
                                       ││  ├─ Escherichia coli (9-466/472) O26:H11 str. 11368   
                                       ││  ├─ Escherichia coli (6-463/469) SMS-3-5   
                                       ││  ├─ Escherichia coli (9-466/472) TA280   
                                       ││  ├─ Escherichia coli (6-463/469) W   
                                       ││  ├─ Escherichia coli (9-466/472) str. K-12 substr. DH10B   
                                       ││ ┌┼─ Escherichia coli (9-466/472) str. K-12 substr. MG1655   
                                       ││ │├─ Escherichia coli (9-466/472) str. K-12 substr. MG1655   
                                       ││ │├─ Escherichia coli (6-463/469) W3110   
                                       ││ │├─ Escherichia coli (9-466/472) W   
                                       ││ │├─ Escherichia coli (9-466/472) TA271   
                                       ││ │├─ Escherichia coli (9-466/472) O55:H7 str. CB9615   
                                       └┤ │├─ Escherichia coli (9-466/472) O157:H7 str. TW14588   
                                        │ │├─ Escherichia coli (6-463/469) O157:H7 str. Sakai   
                                        │ │├─ Escherichia coli (9-466/472) O157:H7 str. FRIK2000   
                                        │ │├─ Escherichia coli (9-466/472) O157:H7 str. EC508   
                                        │ │├─ Escherichia coli (6-463/469) O157:H7 str. EC4401   
                                        │ │├─ Escherichia coli (9-466/472) O157:H7 str. EC4196   
                                        │ │├─ Escherichia coli (6-463/469) O157:H7 str. EC4113   
                                        │ │├─ Escherichia coli (9-466/472) O157:H7 str. EC4045   
                                        │┌┤├─ Escherichia coli (9-466/472) O157:H7 str. EC4024   
                                        │││├─ Escherichia coli (9-466/472) MS 69-1   
                                        │││├─ Escherichia coli (9-466/472) MS 196-1   
                                        │││├─ Escherichia coli (9-466/472) MS 146-1   
                                        │││├─ Escherichia coli (9-466/472) MS 116-1   
                                        │││├─ Escherichia coli (9-466/472) KO11   
                                        │││├─ Escherichia coli (9-466/472) H736   
                                        │││├─ Escherichia coli (9-466/472) H299   
                                        │││├─ Escherichia coli (9-466/472) E110019   
                                        │││├─ Escherichia coli (9-466/472) DH1   
                                        │││├─ Escherichia coli (6-463/469) B354   
                                        │││├─ Escherichia coli (9-466/472) 536A   
                                        │││└─ Escherichia coli (9-466/472) 1125A   
                                        ││└┬─ Escherichia coli (9-466/472) M718   
                                        ││ └┬─ Escherichia coli (9-466/472) O111:H- str. 11128   
                                        ││  └┬─ Escherichia coli (6-463/469) IAI1   
                                        ││   └─ Escherichia coli (6-463/469) IAI1   
                                        ││    ┌─ fig|1040638.4.peg.1278 O104:H4 (9-466/472) str. LB226692   
                                        ││    ├─ Escherichia coli (9-466/472) 101-1   
                                        ││    ├─ Escherichia coli (9-466/472) 55989   
                                        ││    ├─ Escherichia coli (9-466/472) ATCC 8739   
                                        ││    ├─ Escherichia coli (9-466/472) B171   
                                        ││    ├─ Escherichia coli (9-466/472) B7A   
                                        ││    ├─ Escherichia coli (6-463/469) E22   
                                        ││    ├─ Escherichia coli (6-463/469) E24377A   
                                        └┤    ├─ Escherichia coli (9-466/472) MS 124-1   
                                         │    ├─ Escherichia coli (9-466/472) MS 182-1   
                                         │    ├─ Escherichia coli (6-463/469) MS 84-1   
                                         │   ┌┼─ Escherichia coli (9-466/472) SE11   
                                         │   │├─ Escherichia coli (9-466/472) O103:H2 str. 12009   
                                         │   │├─ Escherichia coli (9-466/472) MS 78-1   
                                         │   │├─ Escherichia coli (6-463/469) MS 145-7   
                                         │   │├─ Escherichia coli (9-466/472) MS 115-1   
                                         │   │├─ Escherichia coli (9-466/472) E24377A   
                                         │  ┌┤├─ Escherichia coli (6-463/469) E22   
                                         │  ││├─ Escherichia coli (6-463/469) B7A   
                                         │  ││├─ Escherichia coli (6-463/469) B171   
                                         │  ││├─ Escherichia coli (6-463/469) ATCC 8739   
                                         │  ││├─ Escherichia coli (9-466/472) 55989   
                                         │ ┌┤│└─ fig|6666666.5357.peg.659 TY-2482 (9-466/472) strain   
                                         │ ││└┬─ Escherichia coli (9-466/472) 53638   
                                         │ ││ └─ Escherichia coli (6-463/469) 53638   
                                         │ ││ ┌─ Escherichia coli (9-466/472) 1827-70   
                                         │ ││┌┼─ Escherichia coli (9-466/472) HS   
                                         │┌┤└┤└─ Escherichia coli (6-463/469) HS   
                                         │││ │┌─ Escherichia coli (9-466/472) BL21   
                                         │││ └┼─ Escherichia coli (9-466/472) MS 187-1   
                                         │││  ├─ Escherichia coli (DE3 9-466/472) BL21(DE3)   
                                         │││  └─ Escherichia coli (9-466/472) B str. REL606   
                                         ││└┬─ Escherichia coli (9-466/472) IAI39   
                                         ││ └─ Escherichia coli (9-466/472) IAI39   
                                         └┤┌─ Escherichia coli (1-446/452) O157:H7 str. EC4486   
                                          ││    ┌─ Escherichia coli (9-466/472) ED1a   
                                          ││    ├─ Escherichia coli (6-463/469) O83:H1 str. NRG 857C   
                                          ││   ┌┼─ Escherichia coli (6-463/469) WV_060327   
                                          ││  ┌┤└─ Escherichia coli (9-466/472) ED1a   
                                          ││ ┌┤└─ Escherichia coli (6-463/469) TA206   
                                          ││ │└┬─ Escherichia coli (1-446/452) O127:H6 str. E2348/69   
                                          └┤ │ └┬─ Escherichia coli (26-483/489) E2348/69   
                                           │┌┤  └─ Escherichia coli (9-466/472) 2362-75   
                                           │││┌─ Escherichia coli (9-466/472) 042   
                                           │││├─ Escherichia coli (9-466/472) FVEC1412   
                                           ││└┼─ Escherichia coli (9-466/472) UMN026   
                                           ││ ├─ Escherichia coli (9-466/472) MS 198-1   
                                           ││ ├─ Escherichia coli (9-466/472) FVEC1302   
                                           └┤ └─ Escherichia coli (26-483/489) 042   
                                            │ ┌─ Escherichia coli (9-466/472) 536   
                                            │┌┴─ Escherichia coli (9-466/472) 536   
                                            ││  ┌─ Escherichia coli (9-466/472) 83972   
                                            ││  ├─ Escherichia coli (26-483/489) CFT073   
                                            ││ ┌┼─ Escherichia coli (9-466/472) MS 45-1   
                                            └┤ │├─ Escherichia coli (9-466/472) CFT073   
                                             │┌┤└─ Escherichia coli (9-466/472) ABU 83972   
                                             ││└─ Escherichia coli (12-466/472) MS 185-1   
                                             ││┌─ Escherichia coli (26-483/489) APEC O1   
                                             ││├─ Escherichia coli (9-466/472) F11   
                                             └┤├─ Escherichia coli (6-463/469) M605   
                                              │├─ Escherichia coli (9-466/472) NC101   
                                              │├─ Escherichia coli (9-466/472) SE15   
                                              │├─ Escherichia coli (6-463/469) UM146   
                                              └┼─ Escherichia coli (9-466/472) UTI89   
                                               ├─ Escherichia coli (9-466/472) UTI89   
                                               ├─ Escherichia coli (9-466/472) TA143   
                                               ├─ Escherichia coli (9-466/472) S88   
                                               ├─ Escherichia coli (9-466/472) MS 200-1   
                                               ├─ Escherichia coli (9-466/472) IHE3034   
                                               ├─ Escherichia coli (6-463/469) F11   
                                               └─ Escherichia coli (6-463/469) APEC O1   
  
Nitrogen regulation protein NR(I) (129)
Putative sensory histidine kinase YfhA (128)
Response regulator of zinc sigma-54-dependent two-component system (125)
Acetoacetate metabolism regulatory protein AtoC (70)
Phosphoglycerate transport system transcriptional regulatory protein PgtA (18)
Putative transcriptional regulator (1)
Others (6)