Assemblies of two isolates from the German EHEC/VTEC outbreak strain

LB226692 by Life Tech   TY2482 by BGI   Nick Loman's Blog

Properties of all sequences from RAST annotated Escherichia coli O104:H4 str. LB226692

Query gene (LB226692) Contig Functional Role Homologs in LB226692 Homologs in TY-2482 # E.coli Homologs in Public SEED Compare Regions Closest Neighbor Full Alignment Showing Trimmed Ends Trimmed Profile Full Tree Tree with Identical Seqs Collapsed Median Evolutionary Distance from Query Seq to All Homologs # Std. Dev. of Mean Query-to-All Distance from Mean All-to-All distance
1 1 Phage tail assembly protein I 4868 430 APEC O1 alignment trimmed tree collapsed 0.646 0.471
2 1 Phage tail assembly protein 4867 472 IHE3034 alignment trimmed tree collapsed 0.227 1.854
3 1 Phage tail assembly protein 290 IHE3034 alignment trimmed tree collapsed 0.297 5.968
4 1 Phage minor tail protein 4866 432 UTI89 alignment trimmed tree collapsed 0.304 0.051
5 1 Phage minor tail protein 289 4865 4222 527 042 alignment trimmed tree collapsed 0.945 0.349
6 2 hypothetical protein 717 2269 3552 75 55989 alignment trimmed tree collapsed 0.105 0.176
7 2 orf, conserved hypothetical protein 2268 36 ETEC H10407 alignment trimmed tree collapsed 0.046 0.164
8 3 Phage endolysin 196 4651 4842 912 545 55989 alignment trimmed tree collapsed 0.076 0.717
9 4 IS2 orfB 5 042 alignment trimmed tree collapsed 0.147 1.334
10 5 FIG00642811: hypothetical protein 9 1125A alignment trimmed tree collapsed 0.024 0.117
11 5 Phage protein 94 732 4751 30 O157:H7 str. EC4401 alignment trimmed tree collapsed 0.224 0.397
12 5 FIG00638618: hypothetical protein 93 733 4752 32 O103:H2 str. 12009 alignment trimmed tree collapsed 0.007 0.185
13 5 FIG00641463: hypothetical protein 92 29 O157:H7 str. EC4206 alignment trimmed tree collapsed 0.000 0.299
14 5 conserved phage protein 28 O157:H7 str. TW14359 alignment trimmed tree collapsed 0.000 0.284
15 5 conserved phage protein 297 4141 30 O157:H7 str. TW14359 alignment trimmed tree collapsed 0.000 0.343
16 6 NgrB 215 B str. REL606 alignment trimmed tree collapsed 0.991 0.773
17 6 Antigen 43 precursor 4526 28 HS alignment trimmed tree collapsed 0.372 1.162
18 6 hypothetical protein 3 MS 196-1 alignment trimmed tree collapsed 0.036 0.348
19 7 unnamed protein product 130 2286 256 288 ED1a alignment trimmed tree collapsed 0.917 0.566
20 7 Antirestriction protein klcA 1191 16 042 alignment trimmed tree collapsed 0.057 1.500
21 7 Antirestriction protein klcA 1191 2287 3574 240 UM146 alignment trimmed tree collapsed 0.156 0.028
22 7 Putative radC-like protein yeeS 1190 3575 259 53638 alignment trimmed tree collapsed 0.026 0.334
23 7 YeeT 1189 2289 3576 284 str. K-12 substr. DH10B alignment trimmed tree collapsed 0.015 0.382
24 8 Intergenic-region protein 718 3553 157 SE15 alignment trimmed tree collapsed 0.148 0.529
25 9 NgrB 16 2281 3563 4035 4208 4527 199 IAI39 alignment trimmed tree collapsed 0.070 0.011
26 10 putative lysis protein S of prophage CP-933V 4333 4648 4841 911 585 O157:H7 EDL933 alignment trimmed tree collapsed 0.106 0.184
27 10 Phage endolysin 8 196 4651 410 O103:H2 str. 12009 alignment trimmed tree collapsed 0.165 0.755
28 10 Phage endolysin 8 196 4651 4842 912 568 ED1a alignment trimmed tree collapsed 0.155 0.629
29 10 hypothetical protein 4854 33 O157:H7 EDL933 alignment trimmed tree collapsed 0.000 0.239
30 10 Endopeptidase (EC 3.4.-.-) 192 4331 4654 4843 4184 4799 551 53638 alignment trimmed tree collapsed 1.292 2.843
31 10 hypothetical protein 4626 2 alignment trimmed
32 10 DNA packaging 25 O157:H7 str. EC508 alignment trimmed tree collapsed 0.233 4.443
33 10 Phage protein 4 O157:H7 alignment trimmed tree collapsed 0.039 1.732
34 10 Phage protein 29 O157:H7 str. EC4501 alignment trimmed tree collapsed 0.050 2.731
35 11 putative outer membrane protein 48 6 1044A alignment trimmed tree collapsed 0.068 0.707
36 11 FIG00641526: hypothetical protein 47 609 4597 9 536A alignment trimmed tree collapsed 0.000 0.535
37 11 Outer membrane protein Lom 608 4596 42 O111:H- str. 11128 alignment trimmed tree collapsed 1.131 1.295
38 11 FIG00639116: hypothetical protein 45 252 319 607 106 O157:H7 str. EC4501 alignment trimmed tree collapsed 0.391 1.097
39 11 unknown protein encoded by bacteriophage BP-933W 44 30 O157:H7 str. EC4501 alignment trimmed tree collapsed 0.000 0.400
40 12 FIG00639620: hypothetical protein 26 O157:H7 EDL933 alignment trimmed tree collapsed 0.048 0.380
41 12 Phage protein 307 4740 4741 32 O157:H7 str. TW14588 alignment trimmed tree collapsed 0.196 1.829
42 12 FIG00642416: hypothetical protein 306 19 ED1a alignment trimmed tree collapsed 0.056 1.450
43 12 FIG00640275: hypothetical protein 29 O157:H7 str. EC4076 alignment trimmed tree collapsed 0.014 0.416
44 12 unknown protein encoded by bacteriophage BP-933W 39 30 O103:H2 str. 12009 alignment trimmed tree collapsed 0.022 3.044
45 12 FIG00639116: hypothetical protein 38 252 319 607 106 O157:H7 str. EC4501 alignment trimmed tree collapsed 0.768 1.059
46 12 Outer membrane protein Lom 37 4641 4870 608 4596 514 O103:H2 str. 12009 alignment trimmed tree collapsed 1.209 4.788
47 12 FIG00641526: hypothetical protein 36 609 4597 9 536A alignment trimmed tree collapsed 0.046 1.871
48 12 putative outer membrane protein 35 6 O103:H2 str. 12009 alignment trimmed tree collapsed 0.068 1.414
49 12 Phage tail fiber protein 29 O157:H7 EDL933 alignment trimmed tree collapsed 0.007 0.060
50 12 FIG00640812: hypothetical protein 28 O103:H2 str. 12009 alignment trimmed tree collapsed 0.033 1.125
51 12 Phage tail fiber protein 1
52 13 unknown protein encoded within prophage CP-933V 262 O103:H2 str. 12009 alignment trimmed tree collapsed 0.199 0.401
53 13 Phage tail protein 489 35 MS 198-1 alignment trimmed tree collapsed 0.000 0.150
54 13 Tail completion protein S 490 69 H299 alignment trimmed tree collapsed 1.212 0.786
55 13 Baseplate assembly protein V 491 97 O26:H11 str. 11368 alignment trimmed tree collapsed 1.857 0.294
56 13 Baseplate assembly protein V 491 111 E22 alignment trimmed tree collapsed 0.000 0.629
57 13 Phage baseplate assembly protein 492 117 O157:H7 str. EC869 alignment trimmed tree collapsed 1.007 0.180
58 13 Baseplate assembly protein J 1 alignment collapsed 0.059 0.254
59 13 Baseplate assembly protein J 2186 139 B171 alignment trimmed tree collapsed 0.013 0.083
60 13 Tail protein I 2187 119 B171 alignment trimmed tree collapsed 0.560 0.320
61 13 hypothetical protein 1
62 14 Putative cytoplasmic protein 528 1213 3601 161 UMN026 alignment trimmed tree collapsed 1.077 0.223
63 14 Antigen 43 precursor 69 2282 135 FVEC1302 alignment trimmed tree collapsed 0.071 0.509
64 15 FIG00638673: hypothetical protein 22 O157:H7 str. EC4196 alignment trimmed tree collapsed 0.021 2.601
65 15 similar bacteriphage P22 ninH 172 26 O103:H2 str. 12009 alignment trimmed tree collapsed 0.543 0.928
66 15 Holliday junction resolvase / Crossover junction endodeoxyribonuclease rusA (EC 3.1.22.-) 552 271 1125 2788 419 ED1a alignment trimmed tree collapsed 1.516 0.128
67 15 Phage protein 4836 272 2067 152 O127:H6 str. E2348/69 alignment trimmed tree collapsed 0.479 0.598
68 16 probable vimentin yjdA 1153 3565 3752 207 S88 alignment trimmed tree collapsed 2.332 1.693
69 17 Antigen 43 precursor 2282 125 str. K-12 substr. DH10B alignment trimmed tree collapsed 0.074 0.798
70 17 Antigen 43 precursor 1
71 18 probable DNA methylase 97 4660 3594 3595 4334 171 O157:H7 str. EC4115 alignment trimmed tree collapsed 0.000 0.536
72 18 Shiga-like toxin II subunit A precursor (EC 3.2.2.22) 2487 0 O157:H7 str. Sakai alignment trimmed tree collapsed 0.651 0.737
73 18 Shiga-like toxin II subunit B precursor 2486 55 O157:H7 str. EC4045 alignment trimmed tree collapsed 0.000 0.583
74 19 FIG00639986: hypothetical protein 4534 38 O157:H7 str. EC4045 alignment trimmed tree collapsed 0.000 0.432
75 19 FIG00640259: hypothetical protein 1289 25 O157:H7 str. EC4501 alignment trimmed tree collapsed 0.000 4.899
76 19 hypothetical protein 86 721 2275 3555 1290 4262 264 F11 alignment trimmed tree collapsed 0.604 0.268
77 19 FIG00639802: hypothetical protein 1291 98 O157:H7 str. EC4486 alignment trimmed tree collapsed 0.452 0.038
78 19 hypothetical protein 1292 31 O26:H11 str. 11368 alignment trimmed tree collapsed 0.000 0.183
79 19 orf; Unknown function 1293 28 O157:H7 EDL933 alignment trimmed tree collapsed 0.026 0.496
80 19 FIG00641704: hypothetical protein 8 O157:H7 EDL933 alignment trimmed tree collapsed 0.000 0.384
81 19 orf; Unknown function 1295 21 O157:H7 str. EC4196 alignment trimmed tree collapsed 0.000 0.224
82 19 hypothetical protein 1296 94 O157:H7 str. EC4501 alignment trimmed tree collapsed 0.589 1.460
83 20 hypothetical protein 1
84 20 Haemolysin expression modulating protein paralog 524 720 2273 5154 344 1081 1411 3514 4176 277 SE15 alignment trimmed tree collapsed 0.668 0.139
85 20 hypothetical protein 8 TA271 alignment trimmed tree collapsed 0.000 0.378
86 20 hypothetical protein 76 721 2275 3555 1290 4262 327 CFT073 alignment trimmed tree collapsed 1.881 0.893
87 20 hypothetical protein 2029 3 MS 78-1 alignment trimmed tree collapsed 0.053 0.706
88 21 Phage protein 34 30 O103:H2 str. 12009 alignment trimmed tree collapsed 0.013 3.059
89 21 Phage protein 33 30 O157:H7 str. EC4501 alignment trimmed tree collapsed 0.003 0.148
90 22 FIG00639949: hypothetical protein 3570 66 O103:H2 str. 12009 alignment trimmed tree collapsed 0.232 0.739
91 22 hypothetical protein 3569 65 H299 alignment trimmed tree collapsed 0.007 0.165
92 23 FIG00641463: hypothetical protein 13 29 O103:H2 str. 12009 alignment trimmed tree collapsed 0.029 0.349
93 23 FIG00638618: hypothetical protein 12 733 4752 32 ED1a alignment trimmed tree collapsed 0.100 2.747
94 23 Phage protein 11 732 4751 30 ED1a alignment trimmed tree collapsed 0.224 2.549
95 23 FIG00642811: hypothetical protein 1 alignment collapsed 0.135 1.732
96 23 FIG00642811: hypothetical protein 10 30 ED1a alignment trimmed tree collapsed 0.055 3.437
97 24 probable DNA methylase 4660 0 MS 124-1 alignment trimmed tree collapsed 0.065 0.716
98 25 YcgB protein 42 E110019 alignment trimmed tree collapsed 1.354 0.434
99 25 hypothetical protein 23 2 alignment trimmed
100 25 Phage protein 28 O157:H7 str. TW14588 alignment trimmed tree collapsed 0.017 1.204
101 25 Phage protein 28 O103:H2 str. 12009 alignment trimmed tree collapsed 0.081 3.487
102 26 X polypeptide 818 35 042 alignment trimmed tree collapsed 0.053 1.255
103 26 IncF plasmid conjugative transfer mating signal transduction protein TraM 43 042 alignment trimmed tree collapsed 0.000 0.071
104 26 IncF plasmid conjugative transfer regulator TraJ 4 ED1a alignment trimmed tree collapsed 0.020 1.732
105 26 Insertion element IS1 protein insB 655 2676 4596 4640 216 E110019 alignment trimmed tree collapsed 0.026 0.363
106 26 IS1 orfA 276 651 728 2110 2318 3196 3500 3908 4477 4979 5065 5199 4747 4813 779 B171 alignment trimmed tree collapsed 0.029 0.292
107 26 TnpA transposase 3399 4170 30 MS 107-1 alignment trimmed tree collapsed 0.133 1.002
108 26 resolvase 457 3398 0 MS 182-1 alignment trimmed tree collapsed 2.075 1.046
109 26 Integron integrase IntI1 1
110 27 Phage tail length tape-measure protein 1 4864 281 O157:H7 str. EC508 alignment trimmed tree collapsed 0.576 0.230
111 27 hypothetical protein 1
112 27 Phage minor tail protein 4862 3414 3599 4815 372 EC4100B alignment trimmed tree collapsed 0.049 0.516
113 28 hypothetical protein 4629 19 042 alignment trimmed tree collapsed 0.115 0.680
114 28 Insertion Sequence Associated 210 682 979 2517 3445 4488 4628 586 E22 alignment trimmed tree collapsed 0.000 0.306
115 28 orf, conserved hypothetical protein 209 681 714 2516 3560 4167 4487 4544 4627 725 O26:H11 str. 11368 alignment trimmed tree collapsed 0.465 0.150
116 28 Transposase 680 197 B171 alignment trimmed tree collapsed 0.011 0.505
117 28 COG3436: Transposase and inactivated derivatives 116 207 680 713 981 983 991 1207 1220 2518 3542 3558 2168 4166 4214 4602 4603 945 O157:H7 str. TW14359 alignment trimmed tree collapsed 1.896 0.199
118 29 hypothetical protein 1
119 29 IS5 transposase 161 SE11 alignment trimmed tree collapsed 0.028 0.808
120 29 Trilactone hydrolase IroD 1287 4 042 alignment trimmed tree collapsed 0.000 0.000
121 29 Trilactone hydrolase IroD 1287 45 O157:H7 EDL933 alignment trimmed tree collapsed 0.313 0.144
122 29 Glycosyltransferase IroB 1288 58 O157:H7 EDL933 alignment trimmed tree collapsed 0.357 0.820
123 29 Glycosyltransferase IroB 1288 58 042 alignment trimmed tree collapsed 0.364 0.819
124 30 Per-activated serine protease autotransporter enterotoxin EspC 2520 192 2551 110 B7A alignment trimmed tree collapsed 0.794 0.109
125 30 Per-activated serine protease autotransporter enterotoxin EspC 1223 2520 2551 24 B7A alignment trimmed tree collapsed 0.561 0.896
126 30 Per-activated serine protease autotransporter enterotoxin EspC 1 alignment collapsed 1.370 0.466
127 30 Per-activated serine protease autotransporter enterotoxin EspC 3 B7A alignment trimmed tree collapsed 0.237 1.414
128 30 Putative resolvase 258 21 B7A alignment trimmed tree collapsed 0.000 0.813
129 30 hypothetical protein 257 2 alignment trimmed
130 30 unnamed protein product 19 2286 256 288 MS 185-1 alignment tree collapsed
131 31 Dihydrofolate reductase (EC 1.5.1.3) 1 alignment 1.344 11.573
132 31 Dihydropteroate synthase (EC 2.5.1.15) 1761 1540 2761 157 042 alignment trimmed tree collapsed 1.647 2.232
133 31 transposase TnpA 3010 65 B7A alignment trimmed tree collapsed 0.005 0.483
134 31 TniA putative transposase 12 H299 alignment trimmed tree collapsed 0.010 3.057
135 32 Transcriptional regulator, TetR family 226 26 MS 124-1 alignment trimmed tree collapsed 0.000 0.789
136 32 Tetracycline efflux protein TetA 225 32 042 alignment trimmed tree collapsed 0.003 0.888
137 32 Permease of the drug/metabolite transporter (DMT) superfamily 12 SMS-3-5 alignment trimmed tree collapsed 0.000 0.302
138 32 TniA putative transposase 223 8 MS 84-1 alignment trimmed tree collapsed 0.000 0.000
139 32 Tn21 protein of unknown function Urf2 1103 2164 2812 2923 3893 4047 4236 4472 5150 5464 347 1357 1408 1738 2105 2692 2959 3929 4421 1330 FVEC1412 alignment trimmed tree collapsed 2.654 0.741
140 32 Mercuric transport protein, MerE 12 MS 107-1 alignment trimmed tree 0.000 0.000
141 32 Mercuric resistance operon coregulator 147 3082 3087 32 MS 198-1 alignment trimmed tree collapsed 1.904 0.975
142 32 Mercuric ion reductase (EC 1.16.1.1) 3086 5 B171 alignment trimmed tree collapsed 0.000 0.500
143 32 Mercuric transport protein, MerC 3085 16 MS 198-1 alignment trimmed tree collapsed 0.000 0.263
144 32 Periplasmic mercury(+2) binding protein 3084 16 042 alignment trimmed tree collapsed 0.023 0.216
145 32 Periplasmic mercury(+2) binding protein 1
146 32 Mercuric transport protein, MerT 3083 19 042 alignment trimmed tree collapsed 0.000 0.361
147 32 Mercuric resistance operon regulatory protein 1105 1872 5186 1054 2107 3082 3234 413 042 alignment trimmed tree collapsed 1.834 3.520
148 32 Transposase 4175 99 53638 alignment trimmed tree collapsed 0.000 0.212
149 33 hypothetical protein 36 2362-75 alignment trimmed tree collapsed 0.091 0.295
150 33 hypothetical protein 568 4940 63 O26:H11 str. 11368 alignment trimmed tree collapsed 1.542 1.849
151 33 Phage eae protein 4941 5 O111:H- str. 11128 alignment trimmed tree collapsed 1.627 0.617
152 33 FIG00644471: hypothetical protein 4942 33 1125A alignment trimmed tree collapsed 1.337 1.992
153 33 conserved hypothetical protein 563 2778 4943 66 1125A alignment trimmed tree collapsed 0.718 3.492
154 33 FIG00643819: hypothetical protein 562 2779 4944 72 O103:H2 str. 12009 alignment trimmed tree collapsed 0.650 3.695
155 33 FIG00640679: hypothetical protein 4945 6 O103:H2 str. 12009 alignment trimmed tree collapsed 0.010 0.709
156 33 COG0189: Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)( EC:3.1.11.3 ) 293 373 4991 4946 112 O103:H2 str. 12009 alignment trimmed tree collapsed 0.129 3.713
157 33 Recombinational DNA repair protein RecT (prophage associated) 4947 7 O103:H2 str. 12009 alignment trimmed tree collapsed 0.009 0.859
158 33 FIG00641006: hypothetical protein 4948 9 O157:H7 str. EC508 alignment trimmed tree collapsed 0.361 0.573
159 33 FIG00641274: hypothetical protein 4949 7 O103:H2 str. 12009 alignment trimmed tree collapsed 0.000 0.408
160 33 prophage Kil protein 478 4994 4204 4773 4950 114 O103:H2 str. 12009 alignment trimmed tree collapsed 1.835 3.822
161 33 Phage Rha protein 1
162 33 Type II restriction enzyme BsuBI (EC 3.1.21.4) 4358 7 O157:H7 str. EC4501 alignment trimmed tree collapsed 0.000 0.408
163 33 Modification methylase PstI (EC 2.1.1.72) 4357 5 1125A alignment trimmed tree collapsed 0.006 0.605
164 33 repressor protein CI 4381 46 O157:H7 str. EC4501 alignment trimmed tree collapsed 0.602 0.043
165 33 Regulatory protein cro 3562 4382 34 1125A alignment trimmed tree collapsed 0.705 1.825
166 33 hypothetical protein 1
167 33 FIG00643760: hypothetical protein 3563 7 O157:H7 str. TW14588 alignment trimmed tree 0.000 0.000
168 33 Putative ATP-dependent helicase 3564 13 O157:H7 str. EC4501 alignment trimmed tree collapsed 0.453 1.152
169 33 DNA primase (EC 2.7.7.-) 64 O103:H2 str. 12009 alignment trimmed tree collapsed 2.259 1.879
170 33 Gifsy-2 prophage protein 3566 48 O103:H2 str. 12009 alignment trimmed tree collapsed 1.998 2.244
171 33 Protein NinG 3567 46 O103:H2 str. 12009 alignment trimmed tree collapsed 0.379 1.118
172 33 similar bacteriphage P22 ninH 65 26 O103:H2 str. 12009 alignment trimmed tree collapsed 0.070 1.191
173 33 antitermination protein Q 1
174 34 Chaperone protein aggD precursor 1620 3364 3446 147 55989 alignment trimmed tree collapsed 2.657 2.273
175 34 hypothetical protein 4521 17 53638 alignment trimmed tree collapsed 0.082 1.342
176 34 hypothetical protein 1
177 34 Error-prone repair protein UmuD 4496 132 4228 172 ED1a alignment trimmed tree collapsed 0.828 1.349
178 34 Error-prone, lesion bypass DNA polymerase V (UmuC) 133 156 O157:H7 str. EC4486 alignment trimmed tree collapsed 0.657 1.215
179 34 Error-prone, lesion bypass DNA polymerase V (UmuC) 315 4498 133 182 ED1a alignment trimmed tree collapsed 1.018 1.609
180 34 stable plasmid inheritance protein 2972 13 ED1a alignment trimmed tree collapsed 2.091 1.110
181 34 Putative stability/partitioning protein encoded within prophage CP-933T 3609 2441 2971 118 ED1a alignment trimmed tree collapsed 0.006 0.131
182 34 ybiA 17 TA271 alignment trimmed tree collapsed 0.009 0.180
183 34 hypothetical protein 3148 27 TA271 alignment trimmed tree collapsed 1.709 0.431
184 34 Resolvase 512 3147 122 B171 alignment trimmed tree collapsed 0.071 0.719
185 34 CcdB toxin protein 3146 96 E2348/69 alignment trimmed tree collapsed 0.019 1.217
186 34 CcdA protein (antitoxin to CcdB) 3145 120 E2348/69 alignment trimmed tree collapsed 1.598 1.010
187 34 hypothetical protein 3144 4 MS 145-7 alignment trimmed tree collapsed 0.000 0.972
188 34 Virulence-associated protein vagC 3143 22 MS 115-1 alignment trimmed tree collapsed 0.152 1.261
189 34 VagD 2890 3142 61 MS 145-7 alignment trimmed tree collapsed 1.079 1.525
190 35 hypothetical protein 1
191 35 FIG01068791: hypothetical protein 4800 3 O55:H7 str. CB9615 alignment trimmed tree collapsed 0.045 0.707
192 35 Phage endopeptidase 1
193 35 FIG00641645: hypothetical protein 2813 16 E22 alignment trimmed tree collapsed 0.159 0.594
194 35 Putative antirepressor protein of cryptic prophage CP-933M 2812 146 O157:H7 str. TW14588 alignment trimmed tree collapsed 0.030 0.813
195 35 Putative antirepressor protein of cryptic prophage CP-933M 2812 141 O26:H11 str. 11368 alignment trimmed tree collapsed 0.078 0.322
196 35 COG3772: Phage-related lysozyme (muraminidase) 8 4651 389 ED1a alignment trimmed tree collapsed 0.034 0.201
197 35 hypothetical protein 4649 4261 33 E22 alignment trimmed tree collapsed 0.123 0.153
198 36 Integrase 371 2558 1498 2457 392 O26:H11 str. 11368 alignment trimmed tree collapsed 1.152 0.058
199 36 FIG00642176: hypothetical protein 2456 7 O26:H11 str. 11368 alignment trimmed tree collapsed 0.000 0.866
200 36 FIG00638488: hypothetical protein 2455 60 E22 alignment trimmed tree collapsed 0.119 0.252
201 36 unknown protein encoded by prophage CP-933T 2 H299 alignment trimmed collapsed 0.166 2.400
202 36 hypothetical protein 2453 61 O127:H6 str. E2348/69 alignment trimmed tree collapsed 0.148 0.213
203 36 hypothetical protein 2452 54 E22 alignment trimmed tree collapsed 0.139 1.070
204 37 putative helicase 1 alignment collapsed 0.031 1.340
205 37 putative helicase 1084 34 O103:H2 str. 12009 alignment trimmed tree collapsed 0.032 1.785
206 37 orf; Unknown function 1083 5 ED1a alignment trimmed tree collapsed 0.000 0.816
207 37 Transposase 116 680 713 4166 549 MS 84-1 alignment trimmed tree collapsed 0.581 0.549
208 37 Transposase 4486 2 alignment trimmed
209 37 hypothetical protein 115 681 714 2516 3560 4167 4487 4544 4627 739 CFT073 alignment trimmed tree collapsed 0.076 0.459
210 37 Insertion Sequence Associated 682 979 2517 3445 4488 456 UTI89 alignment trimmed tree collapsed 1.983 0.324
211 38 Z5092 protein 1186 4880 4937 178 ETEC H10407 alignment trimmed tree collapsed 0.153 0.113
212 38 hypothetical protein 1185 2292 219 O111:H- str. 11128 alignment trimmed tree collapsed 0.903 0.489
213 39 COG2003: DNA repair proteins 22 1190 1515 3575 2580 407 55989 alignment trimmed tree collapsed 0.862 0.694
214 39 hypothetical protein 110 ETEC H10407 alignment trimmed tree collapsed 0.000 1.325
215 39 hypothetical protein 3577 288 H299 alignment trimmed tree collapsed 0.090 0.495
216 39 YeeV toxin protein 1187 2291 3578 276 MS 69-1 trimmed tree collapsed 0.013 0.185
217 40 hypothetical protein 1218 146 MS 116-1 alignment trimmed tree collapsed 0.510 8.727
218 40 hypothetical protein 2019 4 MS 116-1 alignment trimmed tree collapsed 0.030 0.585
219 40 transposase 91 MS 116-1 alignment trimmed tree collapsed 0.041 1.426
220 40 Putative transcriptional regulator LYSR-type 739 98 2018 133 MS 116-1 alignment trimmed tree collapsed 0.808 3.521
221 41 Co-activator of prophage gene expression IbrB 37 O157:H7 str. EC4115 alignment trimmed tree collapsed 0.596 1.850
222 41 Co-activator of prophage gene expression IbrA 5295 405 4401 202 M605 alignment trimmed tree collapsed 0.046 1.463
223 41 hypothetical protein 3 O26:H11 str. 11368 alignment trimmed tree collapsed 0.187 0.377
224 41 DNA helicase 2720 0 M605 alignment trimmed tree collapsed 0.003 1.250
225 41 HecB-like protein 16 O103:H2 str. 12009 alignment trimmed tree collapsed 1.709 3.873
226 41 FIG00644081: hypothetical protein 2718 19 M605 alignment trimmed tree collapsed 0.105 1.420
227 41 orf; Unknown function 2265 54 042 alignment trimmed tree collapsed 0.133 0.977
228 41 FIG00642443: hypothetical protein 2266 60 042 alignment trimmed tree collapsed 0.025 0.545
229 42 Phage capsid and scaffold 3054 29 TA271 alignment trimmed tree collapsed 0.014 0.658
230 42 DNA stabilization, phage-associated 3055 15 B088 alignment tree collapsed
231 42 DNA stabilization, phage-associated 3056 30 B7A alignment trimmed tree collapsed 0.013 0.125
232 42 DNA stabilization, phage-associated 3057 22 55989 alignment trimmed tree collapsed 1.248 1.073
233 42 unknown 3058 11 B7A alignment trimmed tree collapsed 0.000 0.532
234 42 Phage major capsid protein 3059 11 55989 alignment trimmed tree collapsed 0.005 0.400
235 42 Phage capsid and scaffold 3060 23 55989 alignment trimmed tree collapsed 1.404 0.889
236 42 Phage portal 3061 18 55989 alignment trimmed tree collapsed 0.011 0.792
237 42 Phage terminase, large subunit 3062 20 55989 alignment trimmed tree collapsed 0.002 0.663
238 42 Phage terminase, small subunit 14 MS 198-1 alignment trimmed tree collapsed 0.007 0.392
239 42 Orf80 3064 31 TA271 alignment trimmed tree collapsed 0.001 0.288
240 43 Phage tail fiber assembly protein 4011 4012 4875 910 365 O111:H- str. 11128 alignment trimmed tree collapsed 1.412 0.088
241 43 Serine acetyltransferase (EC 2.3.1.30) 11 O157:H7 EDL933 alignment trimmed tree collapsed 1.540 1.047
242 43 Phage-related tail protein 1727 92 55989 alignment trimmed tree collapsed 0.853 0.776
243 43 Phage protein 39 55989 alignment trimmed tree collapsed 0.122 0.166
244 43 Phage protein 1 alignment collapsed 0.072 4.607
245 43 putative phage tail protein 1725 103 O157:H7 alignment trimmed tree collapsed 0.067 0.813
246 43 Tail protein 1724 91 O157:H7 str. FRIK2000 alignment trimmed tree collapsed 0.015 0.784
247 43 Major tail tube protein 1723 135 O111:H- str. 11128 alignment trimmed tree collapsed 1.147 0.964
248 43 Phage tail sheath monomer 1722 126 TA206 alignment trimmed tree collapsed 0.022 0.362
249 43 hypothetical protein 44 O157:H7 str. FRIK966 alignment trimmed tree collapsed 0.023 0.968
250 43 Gene D protein 1721 129 E22 alignment trimmed tree collapsed
251 43 FIG00638778: hypothetical protein 493 64 E110019 alignment trimmed tree collapsed 0.024 1.148
252 43 hypothetical protein 38 45 319 607 74 MS 198-1 alignment trimmed tree collapsed 0.965 0.346
253 44 FIG00639121: hypothetical protein 2449 52 MS 198-1 alignment trimmed tree collapsed 0.191 2.084
254 44 FIG00641503: hypothetical protein 2448 45 IHE3034 alignment trimmed tree collapsed 0.050 0.380
255 44 putative derepression protein 2446 48 O55:H7 str. CB9615 alignment trimmed tree collapsed 0.085 0.071
256 44 FIG00641635: hypothetical protein 12 O157:H7 str. EC869 alignment trimmed tree collapsed 0.016 0.488
257 45 Protein of unknown function DUF208 956 21 E110019 alignment trimmed tree collapsed 0.006 0.451
258 45 Putative bacteriophage protein 4193 4 APEC O1 alignment trimmed tree collapsed 0.000 0.578
259 45 putative bacteriophage protein 1
260 45 FIG050068: DNA-binding protein 4191 49 042 alignment trimmed tree collapsed 1.021 2.276
261 45 hypothetical protein 4190 2 alignment trimmed
262 45 Phage Rha protein 17 O157:H7 str. EC4501 alignment trimmed tree collapsed 0.040 2.580
263 46 hypothetical protein 2 MS 84-1 alignment trimmed
264 46 FIG00243119: hypothetical protein 944 20 H299 alignment trimmed tree collapsed 0.000 0.780
265 46 FIG00637919: hypothetical protein 3922 945 2258 371 E2348/69 alignment trimmed tree collapsed 0.060 1.218
266 46 FIG00640038: hypothetical protein 948 6 ED1a alignment trimmed tree 0.000 0.000
267 46 FIG00640215: hypothetical protein 949 40 55989 alignment trimmed tree collapsed 0.521 0.478
268 46 ORF 1 950 108 O111:H- str. 11128 alignment trimmed tree collapsed 0.089 0.092
269 46 putative regulator; Regulation (Phage or Prophage Related) 951 26 MS 107-1 alignment trimmed tree collapsed 0.017 4.747
270 46 Regulatory protein Cro of bacteriophage BP-933W 952 46 B7A alignment trimmed tree collapsed 0.957 0.732
271 46 Phage or Prophage Related 953 265 O157:H7 str. TW14588 alignment trimmed tree collapsed 1.711 0.630
272 46 Primosomal protein I 954 82 042 alignment trimmed tree collapsed 0.038 0.254
273 46 Primosomal protein I 4998 954 4200 261 O157:H7 EDL933 alignment trimmed tree collapsed 0.181 0.742
274 47 FIG00640897: hypothetical protein 388 2984 121 O157:H7 str. EC4076 alignment trimmed tree collapsed 0.233 0.320
275 48 FIG00641432: hypothetical protein 9 CFT073 alignment trimmed tree collapsed 0.112 1.157
276 49 IS1 orfA 106 651 728 2110 2318 3196 3500 3908 4477 4979 5065 5199 4747 4813 779 B7A alignment trimmed tree collapsed 0.124 0.055
277 50 hypothetical protein 2175 2177 2178 4533 4534 4398 468 CFT073 alignment trimmed tree collapsed 0.048 0.730
278 51 Transposase 291 2393 57 1827-70 alignment trimmed tree collapsed 0.180 1.435
279 52 hypothetical protein 722 2276 3556 2026 4164 129 SE15 alignment trimmed tree collapsed 0.159 0.505
280 53 Transposase 1209 2514 44 042 alignment trimmed tree collapsed 0.028 0.534
281 54 hypothetical protein 2 042 alignment trimmed
282 54 Transposase 4595 63 53638 alignment trimmed tree collapsed 0.251 1.295
283 54 FIG00639568: hypothetical protein 5 042 alignment trimmed tree collapsed 0.000 0.490
284 55 unknown 723 4143 15 042 alignment trimmed tree collapsed 0.000 0.452
285 56 Hypothetical fimbrial chaperone yqiH 1
286 57 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) 3239 5002 5585 118 282 509 407 HS alignment trimmed tree collapsed 0.702 0.102
287 58 IncI1 plasmid conjugative transfer pilus-tip adhesin protein PilV 8 MS 84-1 alignment trimmed tree collapsed 0.350 1.125
288 59 Transposase 696 60 55989 alignment trimmed tree collapsed 0.805 0.172
289 60 Phage minor tail protein 4865 523 UTI89 alignment trimmed tree collapsed 0.802 0.923
290 61 Transposase 2392 60 1827-70 alignment trimmed tree collapsed 0.399 2.406
291 61 Transposase 52 ED1a alignment trimmed tree collapsed 0.182 0.023
292 62 hypothetical protein 4845 293 CFT073 alignment trimmed tree collapsed 0.000 0.152
293 63 Phage exonuclease (EC 3.1.11.3); Putative phage-encoded enzyme involved in integration-recombination 156 373 4991 4946 112 E110019 alignment trimmed tree collapsed 0.032 0.018
294 64 Ferredoxin reductase 3568 117 O157:H7 str. EC869 alignment trimmed tree collapsed 0.000 0.578
295 65 hypothetical protein 215 1188 2290 3577 346 E24377A alignment trimmed tree collapsed 0.081 0.538
296 66 FIG00643398: hypothetical protein 29 ED1a alignment trimmed tree collapsed 0.151 2.942
297 66 conserved phage protein 15 4141 30 ED1a alignment trimmed tree collapsed 0.016 2.047
298 66 hypothetical protein 4142 2 alignment trimmed
299 67 Z1226 protein 313 382 1184 2293 1070 170 O157:H7 str. TW14588 alignment trimmed tree collapsed 0.148 0.535
300 68 Terminase small subunit 4847 3426 4339 230 ABU 83972 alignment trimmed tree collapsed 0.730 0.169
301 69 Antigen 43 precursor 76 str. K-12 substr. DH10B alignment trimmed tree collapsed 0.208 0.053
302 69 Antigen 43 precursor 4519 110 MS 145-7 alignment trimmed tree collapsed 0.395 0.815
303 70 endopeptidase 30 192 4331 4654 4843 4184 4799 569 MS 45-1 alignment trimmed tree collapsed 0.825 1.285
304 71 hypothetical protein 4653 4182 4798 60 O157:H7 EDL933 alignment trimmed tree collapsed 0.067 1.448
305 71 FIG00641645: hypothetical protein 4652 4183 4797 19 FVEC1302 alignment trimmed tree collapsed 0.000 0.755
306 72 FIG00642416: hypothetical protein 42 19 O157:H7 str. TW14359 alignment trimmed tree collapsed 0.007 0.557
307 72 hypothetical protein 41 4740 4741 32 O157:H7 str. TW14588 alignment trimmed tree collapsed 0.099 0.852
308 73 hypothetical protein 40 29 ED1a alignment trimmed tree collapsed 0.009 2.846
309 73 Phage protein 3598 29 ED1a alignment trimmed tree collapsed 0.066 2.416
310 74 putative DNA packaging protein of prophage; terminase large subunit 4314 4848 2755 3425 250 S88 alignment trimmed tree collapsed 0.154 0.295
311 75 IS, phage, Tn; Transposon-related functions 75 MS 145-7 alignment trimmed tree collapsed 0.239 2.146
312 76 hypothetical protein 2382 2 alignment trimmed
313 77 Z1226 protein 299 382 1184 2293 1070 170 ED1a alignment trimmed tree collapsed 0.203 0.436
314 78 Phage tail fiber protein 4874 184 O26:H11 str. 11368 alignment trimmed tree collapsed 0.545 0.362
315 79 Error-prone, lesion bypass DNA polymerase V (UmuC) 4498 133 180 O157:H7 str. EC4486 alignment trimmed tree collapsed 0.121 1.188
316 80 hypothetical protein 4 MS 196-1 alignment trimmed tree 0.000 0.000
317 81 Chromosome partitioning protein ParA 2148 13 MS 200-1 alignment trimmed tree collapsed 0.000 0.926
318 81 hypothetical protein 3 MS 200-1 alignment trimmed tree collapsed 0.000 1.414
319 82 hypothetical protein 38 45 252 607 106 O103:H2 str. 12009 alignment trimmed tree collapsed 0.000 0.390
320 83 Phage protein 34 30 O103:H2 str. 12009 alignment trimmed tree collapsed 0.000 0.330
321 84 IS150 ORF B 688 824 3060 3497 4337 1274 2485 3483 811 042 alignment trimmed tree collapsed 1.812 1.343
322 85 Replication initiation protein (Replication-associated protein) 27 MS 200-1 alignment trimmed tree collapsed 0.056 0.549
323 86 hypothetical protein 2 101-1 alignment trimmed
324 87 Phage DNA-packaging protein 4323 153 MS 21-1 alignment trimmed tree collapsed 1.748 0.443
325 88 ORF C81-like 357 4 O157:H7 EDL933 alignment trimmed tree collapsed 0.142 0.925
326 88 ORF B78 358 125 O157:H7 str. EC4196 alignment trimmed tree collapsed 0.000 0.566
327 88 unknown protein encoded within prophage CP-933V 52 288 O157:H7 str. EC4501 alignment trimmed tree collapsed 1.217 0.689
328 89 hypothetical protein 408 2984 3407 257 O157:H7 str. EC4042 alignment trimmed tree collapsed 0.337 0.298
329 89 LygF 4661 955 2983 209 O55:H7 str. CB9615 alignment trimmed tree collapsed 0.874 1.486
330 89 FIG00638204: hypothetical protein 2982 93 O55:H7 str. CB9615 alignment trimmed tree collapsed 1.782 0.798
331 89 FIG00639545: hypothetical protein 2981 99 O157:H7 str. EC4113 alignment trimmed tree collapsed 0.020 0.504
332 90 Enhancing lycopene biosynthesis protein 1 38 MS 45-1 alignment trimmed tree collapsed 0.742 1.525
333 90 FIG00642986: hypothetical protein 7 MS 198-1 alignment trimmed tree collapsed 0.041 2.264
334 90 hypothetical protein 52 360 334 E2348/69 alignment trimmed tree collapsed 0.087 0.632
335 91 Phage protein 28 ED1a alignment trimmed tree collapsed 0.246 5.015
336 92 hypothetical protein 3 UM146 alignment trimmed tree collapsed 0.025 1.414
337 92 FIG00642415: hypothetical protein 4775 13 042 alignment trimmed tree 0.000 0.000
338 92 Phage tail fiber protein 4 B354 alignment trimmed tree collapsed 1.280 1.450
339 93 Phage Kil 708 26 UTI89 alignment trimmed tree collapsed 0.000 0.200
340 93 hypothetical protein 4 O157:H7 alignment trimmed tree collapsed 0.401 1.732
341 94 FIG00640812: hypothetical protein 1
342 94 hypothetical protein 2321 3 EC4100B alignment trimmed tree collapsed 0.054 0.707
343 94 Phage tail fiber protein 1
344 95 FIG00642238: hypothetical protein 4688 6 O157:H7 str. EC4501 alignment trimmed tree collapsed 0.022 0.000
345 95 hypothetical protein 1
346 95 Phage protein 4687 27 O157:H7 alignment trimmed tree 0.000 0.000
347 95 Phage Rha protein 4686 39 ED1a alignment trimmed tree collapsed 0.000 0.003
348 95 hypothetical protein 2 O157:H7 str. TW14588 alignment trimmed
349 96 hypothetical protein 45 042 alignment trimmed tree collapsed 0.219 0.297
350 96 FIG00638494: hypothetical protein 4152 18 B171 alignment trimmed tree collapsed 0.156 0.813
351 96 hypothetical protein 4186 38 E22 alignment trimmed tree collapsed 0.000 0.236
352 97 FIG00639136: hypothetical protein 5 55989 alignment trimmed tree collapsed 0.020 0.816
353 97 Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) 1068 6 55989 alignment trimmed tree 0.000 0.000
354 97 putative transposase 1067 5 ED1a alignment trimmed tree collapsed 0.029 0.689
355 98 Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3) 1072 32 MS 84-1 alignment trimmed tree collapsed 0.000 0.607
356 99 FIG00641374: hypothetical protein 210 682 979 2517 3445 4488 422 H299 alignment trimmed tree collapsed 0.323 2.240
357 100 ORF C81-like 325 4 O157:H7 EDL933 alignment trimmed tree collapsed 0.154 1.108
358 100 ORF B78 326 125 ABU 83972 alignment trimmed tree collapsed 0.146 0.032
359 100 unknown protein encoded within prophage CP-933V 327 2116 2754 134 ED1a alignment trimmed tree collapsed 1.225 2.852
360 100 unknown protein encoded within prophage CP-933V 104 O157:H7 EDL933 alignment trimmed tree collapsed 0.208 0.202
361 101 FIG01068760: hypothetical protein 4266 5 53638 alignment trimmed tree collapsed 0.000 0.500
362 101 Hypothetical bacteriophage protein 4380 1630 4265 305 O157:H7 EDL933 alignment trimmed tree collapsed 1.361 0.773
363 101 FIG00642108: hypothetical protein 31 ED1a alignment trimmed tree collapsed 0.316 2.546
364 102 Integrase 412 320 3404 114 EC4100B alignment trimmed tree collapsed 0.463 0.921
365 103 hypothetical protein 2 MS 124-1 alignment trimmed
366 103 Protein finQ 1077 4 MS 84-1 alignment trimmed tree collapsed 0.000 1.732
367 104 Tellurium resistance protein TerD 368 490 2352 2483 2484 111 1125A alignment trimmed tree collapsed 0.912 0.752
368 104 Tellurium resistance protein TerD 491 503 2351 2483 110 APEC O1 alignment trimmed tree collapsed 1.336 0.582
369 105 LysR family transcriptional regulator YbhD 1392 3641 4093 4105 5351 1115 1333 1427 2190 3526 4133 945 MS 146-1 alignment trimmed tree collapsed 1.312 0.725
370 105 hypothetical protein 71 O157:H7 str. EC4501 alignment trimmed tree collapsed 0.054 0.501
371 106 Phage integrase 320 86 B088 alignment trimmed tree collapsed 0.383 0.640
372 106 hypothetical bacteriophage protein 410 3406 4546 27 O157:H7 str. TW14588 alignment trimmed tree collapsed 1.053 0.549
373 106 Phage exonuclease (EC 3.1.11.3); Putative phage-encoded enzyme involved in integration-recombination 3 E110019 alignment trimmed tree collapsed 0.027 1.414
374 106 putative factor; Integration, recombination (Phage or Prophage Related) 157 4992 4601 4808 4947 181 ED1a alignment trimmed tree collapsed 0.207 0.974
375 107 YdfA 2425 22 KO11 alignment trimmed tree collapsed 0.031 1.927
376 107 YDFB protein 2424 21 TA206 alignment trimmed tree collapsed 0.012 0.497
377 107 CcgAII protein 2423 10 MS 200-1 alignment trimmed tree collapsed 0.366 0.690
378 107 Transposase 755 1988 3325 3386 50 2422 2690 3105 4052 592 O157:H7 str. EC4401 alignment trimmed tree collapsed 1.033 2.070
379 107 FIG01048106: hypothetical protein 378 2422 88 O157:H7 str. EC4486 alignment trimmed tree collapsed 1.441 0.122
380 107 hypothetical protein 3153 22 E22 alignment trimmed tree collapsed 0.000 0.827
381 107 hypothetical protein 3152 16 W alignment trimmed tree collapsed 0.193 0.817
382 107 Z1226 protein 299 313 1184 2293 1070 170 MS 200-1 alignment trimmed tree collapsed 1.617 2.319
383 107 hypothetical protein 1071 22 E22 alignment trimmed tree collapsed 0.018 0.309
384 108 FIG00643839: hypothetical protein 4383 58 ED1a alignment trimmed tree collapsed 0.308 3.332
385 108 FIG00642459: hypothetical protein 3 ED1a alignment trimmed tree 0.000 0.000
386 108 Primosomal protein I 31 ED1a alignment trimmed tree collapsed 0.347 3.020
387 108 DNA replication protein DnaC 71 2985 246 ED1a alignment trimmed tree collapsed 0.286 1.179
388 108 hypothetical protein 274 2984 229 ED1a alignment trimmed tree collapsed 0.158 0.150
389 109 hypothetical protein 1
390 109 hypothetical protein 1
391 109 IncI1 plasmid conjugative transfer lipoprotein PilN 2819 34 MS 84-1 alignment trimmed tree collapsed 1.727 0.187
392 110 putative phage inhibition, colicin resistance and tellurite resistance protein 117 5 O103:H2 str. 12009 alignment trimmed tree collapsed 0.004 0.621
393 111 Phage integrase 832 2500 3437 3509 5408 1533 3044 3503 4073 648 IAI39 alignment trimmed tree collapsed 3.327 0.890
394 112 Phage antirepressor protein 16 ED1a alignment trimmed tree collapsed 0.511 2.762
395 112 FIG00638905: hypothetical protein 651 7 O157:H7 EDL933 alignment trimmed tree collapsed 0.026 1.581
396 112 Residues 1 to 124 of 152 are 85.48 pct identical to residues 1 to 124 of 238 from GenPept.129 : >gb|AAK28855.1|AF335538_7 (AF335538) unknown [Bacteriophage HK620] 3 FVEC1302 alignment trimmed tree collapsed 0.264 1.360
397 113 IncI1 plasmid conjugative transfer protein TraA 2824 12 MS 84-1 alignment trimmed tree 0.000 0.000
398 113 IncI1 plasmid conjugative transfer NusG-type transcription antiterminator TraB 2823 21 W alignment trimmed tree collapsed 0.440 0.450
399 114 hypothetical protein 330 403 2982 128 EC4100B alignment trimmed tree collapsed 0.816 0.094
400 114 hypothetical bacteriophage protein 372 4546 53 E110019 alignment trimmed tree collapsed 0.228 0.253
401 114 Putative bacteriophage protein 319 54 EC4100B alignment trimmed tree collapsed 0.357 0.326
402 114 FIG00640632: hypothetical protein 8 B171 alignment trimmed tree collapsed 0.062 0.581
403 115 hypothetical protein 24 O26:H11 str. 11368 alignment trimmed tree collapsed 0.817 0.757
404 115 Phage antirepressor protein 2 O103:H2 str. 12009 alignment trimmed
405 115 FIG00640884: hypothetical protein 3410 4 O157:H7 str. EC508 alignment trimmed tree 0.000 0.000
406 115 putative adenine methylase 3409 4 1125A alignment trimmed tree collapsed 0.005 0.599
407 115 FIG00640877: hypothetical protein 3408 27 O157:H7 str. TW14588 alignment trimmed tree collapsed 0.016 0.762
408 115 FIG00640124: hypothetical protein 3407 21 O26:H11 str. 11368 alignment trimmed tree collapsed 0.103 0.274
409 115 hypothetical protein 1
410 115 hypothetical bacteriophage protein 372 3406 4546 27 O157:H7 str. TW14588 alignment trimmed tree collapsed 1.597 0.620
411 115 Phage excisionase 36 1044A alignment trimmed tree collapsed 1.172 1.856
412 115 Phage integrase 320 3404 107 O26:H11 str. 11368 alignment trimmed tree collapsed 0.741 2.367
413 116 putative replication protein 8 MS 145-7 alignment trimmed tree 0.000 0.000
414 116 IS, phage, Tn; Transposon-related functions 1807 10 O83:H1 str. NRG 857C alignment trimmed tree collapsed 0.000 0.406
415 117 AatP permease 10 55989 alignment trimmed tree collapsed 0.003 1.024
416 117 unknown in ISEc8 210 356 670 682 979 2517 3445 4488 4616 280 55989 alignment trimmed tree collapsed 0.568 0.456
417 117 Per-activated serine protease autotransporter enterotoxin EspC 125 1223 2520 2551 51 55989 alignment trimmed tree collapsed 0.439 0.015
418 118 hypothetical protein 5 55989 alignment trimmed tree collapsed 0.700 2.000
419 118 FIG00643705: hypothetical protein 2387 3440 10 B185 alignment trimmed tree collapsed 0.230 2.000
420 118 hypothetical protein 3441 6 042 alignment trimmed tree collapsed 0.000 0.707
421 119 FIG01047982: hypothetical protein 1214 88 B7A alignment trimmed tree collapsed 0.092 0.349
422 119 PsiB protein 1215 99 B7A alignment trimmed tree collapsed 0.184 1.097
423 119 PsiA protein 1216 94 B7A alignment trimmed tree collapsed 0.560 1.948
424 119 Eaa protein 1217 17 MS 200-1 alignment trimmed tree collapsed 0.061 1.269
425 119 Antirestriction protein ArdA 1185 19 E22 alignment trimmed tree collapsed 0.000 0.399
426 119 hypothetical protein 1186 13 E22 alignment trimmed tree collapsed 0.000 0.289
427 120 Outer membrane usher protein fimD precursor 1618 1727 2193 4256 4798 5238 5702 170 236 592 1600 1657 3363 3663 4743 4925 1110 ED1a alignment trimmed tree collapsed 1.833 0.306
428 121 AatB 2204 6 042 alignment trimmed tree collapsed 1.495 0.986
429 121 hypothetical protein 1
430 121 AatD 10 ED1a alignment trimmed tree collapsed 0.032 0.958
431 122 COG1961: Site-specific recombinases, DNA invertase Pin homologs 108 457 1366 3398 228 MS 187-1 alignment trimmed tree collapsed 2.002 1.022
432 122 hypothetical protein 1367 4 MS 84-1 alignment trimmed tree collapsed 0.018 0.000
433 122 FIG01068028: hypothetical protein 1368 6 MS 187-1 alignment trimmed tree 0.000 0.000
434 123 NAD-dependent epimerase/dehydratase family protein/3-beta hydroxysteroid dehydrogenase/isomerase family protein 4714 3681 3851 233 TA271 alignment trimmed tree collapsed 1.948 0.979
435 123 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) 5285 414 3680 173 H591 alignment trimmed tree collapsed 1.873 1.043
436 123 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) 3680 89 53638 alignment trimmed tree collapsed 0.012 2.614
437 123 Hypothetical protein yghO 3679 100 TA280 alignment trimmed tree collapsed 0.000 0.484
438 123 Hypothetical protein yghO 3679 102 M718 alignment trimmed tree collapsed 0.008 0.737
439 123 Glycolate utilization operon transcriptional activator GlcC 3678 101 B7A alignment trimmed tree collapsed 0.012 4.903
440 124 hypothetical protein 1
441 124 IncI1 plasmid conjugative transfer lipoprotein PilN 1
442 124 IncI1 plasmid conjugative transfer protein PilM 2820 27 W alignment trimmed tree collapsed 1.845 0.500
443 124 IncI1 plasmid conjugative transfer protein PilL 2821 21 W alignment trimmed tree collapsed 0.009 0.822
444 124 IncI1 plasmid conjugative transfer protein PilK 2 TA206 alignment trimmed
445 124 IncI1 plasmid conjugative transfer protein TraC 2822 23 O157:H7 str. EC4401 alignment trimmed tree collapsed 0.014 0.884
446 125 hypothetical protein 1092 10 O157:H7 str. EC4024 alignment trimmed tree collapsed 0.000 1.923
447 125 FIG01049774: hypothetical protein 1093 17 SE15 alignment trimmed tree collapsed 1.101 2.739
448 125 COG3109: Activator of osmoprotectant transporter ProP 24 MS 200-1 alignment trimmed tree collapsed 0.010 0.670
449 125 FIG00641825: hypothetical protein 4169 10 KO11 alignment trimmed tree collapsed 0.020 0.832
450 125 Transposase 107 3399 4170 53 MS 107-1 alignment trimmed tree collapsed 0.000 1.120
451 125 Transposase 3399 4170 30 MS 78-1 alignment trimmed tree collapsed 0.636 0.437
452 125 Tryptophan synthase beta chain like (EC 4.2.1.20) 1
453 125 Beta-lactamase (EC 3.5.2.6) 4172 2 alignment trimmed
454 125 hypothetical protein 4173 5 MS 182-1 alignment trimmed tree 0.000 0.000
455 125 transposase InsC3 for insertion sequence ISEc9 4 E22 alignment trimmed tree 0.000 0.000
456 125 Tn1 transposase 1542 12 MS 78-1 alignment trimmed tree collapsed 0.000 0.543
457 125 hypothetical protein 108 3398 226 O157:H7 str. EC4486 alignment trimmed tree collapsed 2.106 1.010
458 126 Transposase 1701 2580 3418 4780 5370 4512 4816 287 E22 alignment trimmed tree collapsed 0.343 2.307
459 126 Transposase insC for insertion element IS2A/D/F/H/I/K 4513 225 55989 alignment trimmed tree collapsed 0.582 2.927
460 126 fimbrial regulator 22 55989 alignment trimmed tree collapsed 2.600 1.216
461 127 IncF plasmid conjugative transfer DNA-nicking and unwinding protein TraI 47 MS 145-7 alignment trimmed tree collapsed 0.025 0.322
462 128 Integrase 3045 13 O26:H11 str. 11368 alignment trimmed tree collapsed 0.002 0.547
463 128 hypothetical protein 3046 14 EC4100B alignment trimmed tree collapsed 0.591 1.332
464 128 FIG00640501: hypothetical protein 11 EC4100B alignment trimmed tree collapsed 0.153 0.394
465 128 FIG00641872: hypothetical protein 3050 5 MS 187-1 alignment trimmed tree collapsed 0.006 0.500
466 128 FIG00641589: hypothetical protein 3051 5 MS 187-1 alignment trimmed tree 0.000 0.000
467 128 hypothetical protein 3052 6 MS 187-1 alignment trimmed tree collapsed 0.000 0.536
468 128 hypothetical protein 3053 4 MS 187-1 alignment trimmed tree 0.000 0.000
469 129 involved in conjugative DNA transfer 1073 52 O157:H7 str. EC4024 alignment trimmed tree collapsed 0.482 1.057
470 129 TrbC-like protein 1074 20 O157:H7 str. EC4024 alignment trimmed tree collapsed 0.003 0.582
471 129 TrbB protein 1075 23 MS 107-1 alignment trimmed tree collapsed 0.697 0.861
472 129 TrbB protein 1075 23 E22 alignment trimmed tree collapsed 0.757 0.816
473 129 TrbA 1076 24 SE11 alignment trimmed tree collapsed 0.005 0.792
474 129 TrbA 1
475 130 Host-nuclease inhibitor protein Gam 4993 145 ED1a alignment trimmed tree collapsed 0.161 2.782
476 130 Exodeoxyribonuclease VIII (EC 3.1.11.-) 6 ED1a alignment trimmed tree collapsed 0.478 0.832
477 130 hypothetical protein 4774 3 ED1a alignment trimmed tree collapsed 0.000 0.707
478 130 Kil protein 160 4994 4204 4773 4950 110 ED1a alignment trimmed tree collapsed 0.300 0.292
479 131 FIG00643940: hypothetical protein 0
480 131 hypothetical protein 2 042 alignment trimmed
481 131 Microcin H47 immunity protein mchI 1
482 132 Anaerobic C4-dicarboxylate transporter 836 1169 2015 3472 3971 286 MS 200-1 alignment trimmed tree collapsed 0.942 2.572
483 132 Anaerobic C4-dicarboxylate transporter 836 2015 3472 148 MS 200-1 alignment trimmed tree collapsed 1.059 2.221
484 132 Anaerobic C4-dicarboxylate transporter 5 MS 69-1 alignment trimmed tree collapsed 0.789 2.000
485 132 Aspartate racemase (EC 5.1.1.13) 2016 8 MS 200-1 alignment trimmed tree collapsed 0.124 0.393
486 132 hypothetical protein 2017 4 MS 116-1 alignment trimmed tree 0.000 0.000
487 133 Integral membrane protein TerC 4340 36 O157:H7 EDL933 alignment trimmed tree collapsed 0.005 0.243
488 133 Integral membrane protein TerC 4340 36 O157:H7 EDL933 alignment trimmed tree collapsed 0.000 5.916
489 133 Tellurite resistance protein TerB 131 APEC O1 alignment trimmed tree collapsed 0.013 1.647
490 133 Tellurium resistance protein TerA 2352 30 E110019 alignment trimmed tree collapsed 0.003 1.509
491 133 Tellurium resistance protein TerD 368 2351 2483 95 O157:H7 str. EC4042 alignment trimmed tree collapsed 1.129 1.286
492 133 Carbamoylphosphate synthase large subunit (split gene in MJ) 2350 36 APEC O1 alignment trimmed tree collapsed 0.023 3.735
493 133 Carbamoylphosphate synthase large subunit (split gene in MJ) 2350 35 APEC O1 alignment trimmed tree collapsed 0.131 3.260
494 133 COG0503: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins 2349 36 APEC O1 alignment trimmed tree collapsed 0.047 3.639
495 133 COG0503: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins 2349 35 APEC O1 alignment trimmed tree collapsed 0.025 3.192
496 133 orf; Unknown function 23 APEC O1 alignment trimmed tree collapsed 0.005 2.599
497 133 putative ATP/GTP-binding protein protein 2346 34 APEC O1 alignment trimmed tree collapsed 0.009 1.760
498 133 Citrate lyase beta subunit 2345 36 O157:H7 str. EC4196 alignment trimmed tree collapsed 0.006 2.140
499 133 FIG00638191: hypothetical protein 2344 35 O157:H7 str. EC4113 alignment trimmed tree collapsed 0.013 1.391
500 133 TerW 2343 10 536A alignment trimmed tree collapsed 0.009 2.000
501 133 TerW 2343 34 APEC O1 alignment trimmed tree collapsed 0.066 4.436
502 133 TerY 505 2342 9 APEC O1 alignment trimmed tree collapsed 0.005 1.108
503 133 Tellurium resistance protein terX 368 491 2351 2483 109 APEC O1 alignment trimmed tree collapsed 1.048 2.722
504 133 hypothetical protein 1
505 133 FIG00641661: hypothetical protein 3 APEC O1 alignment trimmed tree collapsed 0.009 1.414
506 133 FIG00638891: hypothetical protein 4337 4 APEC O1 alignment trimmed tree collapsed 0.000 0.000
507 133 Putative kinase protein 4338 4 APEC O1 alignment trimmed tree collapsed 0.006 0.000
508 134 truncated aminoglycoside phosphotransferase 1538 15 E2348/69 alignment trimmed tree collapsed 0.004 0.067
509 134 streptomycin 3'-phosphotransferase( EC:2.7.1.87 ) 1539 28 SMS-3-5 alignment trimmed tree collapsed 0.004 0.573
510 135 RepFIB replication protein A 1526 68 E110019 alignment trimmed tree collapsed 0.019 0.181
511 135 FIG00243898: hypothetical protein 1527 24 H299 alignment trimmed tree collapsed 0.051 0.332
512 135 RepFIB associated resolvase 184 3147 118 H299 alignment trimmed tree collapsed 1.052 0.689
513 135 FIG00643146: hypothetical protein 3165 262 1529 51 SE11 alignment trimmed tree collapsed 0.447 3.024
514 135 hypothetical protein 1530 43 ED1a alignment trimmed tree collapsed 0.045 0.096
515 135 RepA1 4525 88 E22 alignment trimmed tree collapsed 0.177 0.071
516 135 replication protein 4525 87 O157:H7 str. EC508 alignment trimmed tree collapsed 0.001 0.620
517 135 Replication regulatory protein repA2 (Protein copB) 4524 79 MS 145-7 alignment trimmed tree collapsed 0.891 1.006
518 136 IncF plasmid conjugative transfer DNA-nicking and unwinding protein TraI 47 FVEC1412 alignment trimmed tree collapsed 0.032 0.339
519 136 IncF plasmid conjugative transfer DNA-nicking and unwinding protein TraI 612 74 E110019 alignment trimmed tree collapsed 0.091 2.834
520 136 IncF plasmid conjugative transfer pilin acetylase TraX 611 75 E110019 alignment trimmed tree collapsed 0.073 0.309
521 136 IncF plasmid conjugative transfer fertility inhibition protein FinO 610 79 E22 alignment trimmed tree collapsed 0.016 0.109
522 137 hypothetical protein 3 MS 196-1 alignment trimmed tree collapsed 0.125 1.414
523 137 FIG00641805: hypothetical protein 5 SE11 alignment trimmed tree collapsed 0.053 1.316
524 137 Haemolysin expression modulating protein paralog 2273 3675 5154 1081 1411 3945 326 SE11 alignment trimmed tree collapsed 0.733 1.694
525 137 surface exclusion protein 1082 20 W alignment trimmed tree collapsed 0.347 0.878
526 137 IncI1 plasmid conjugative transfer integral membrane protein TraY 4002 24 W alignment trimmed tree collapsed 0.487 0.650
527 138 hypothetical protein 1
528 138 Putative cytoplasmic protein 1213 127 MS 21-1 alignment trimmed tree collapsed 0.977 0.871
529 138 Single-stranded DNA-binding protein 1101 1212 2103 259 B7A alignment trimmed tree collapsed 0.073 0.092
530 138 YchA 7 B7A alignment trimmed tree collapsed 0.013 0.287
531 138 hypothetical protein 2954 93 O157:H7 str. EC4042 alignment trimmed tree collapsed 0.016 0.674
532 138 Orf52 protein 2953 95 E24377A alignment trimmed tree collapsed 0.056 0.268
533 138 Putative antirestriction protein 21 1191 2287 3574 2952 311 O157:H7 str. EC869 alignment trimmed tree collapsed 0.008 1.448
534 138 FIG00638373: hypothetical protein 71 W alignment trimmed tree collapsed 0.036 0.581
535 138 YcgB 3992 73 W alignment trimmed tree collapsed 0.014 0.318
536 138 putative cytoplasmic protein 3993 80 W alignment trimmed tree collapsed 0.252 0.480
537 138 Adenine-specific methyltransferase (EC 2.1.1.72) 3994 78 UTI89 alignment trimmed tree collapsed 0.187 0.175
538 138 hypothetical protein 14 H299 alignment trimmed tree collapsed 0.059 0.063
539 138 Plasmid PO157 DNA, complete sequence 3996 61 B7A alignment trimmed tree collapsed 0.093 0.686
540 139 hypothetical protein 1088 13 SE15 alignment trimmed tree collapsed 0.018 0.506
541 139 FIG00644451: hypothetical protein 1089 5 O103:H2 str. 12009 alignment trimmed tree collapsed 0.044 1.225
542 139 hypothetical protein 4218 3 SE15 alignment trimmed tree 0.000 0.000
543 139 Transposase 4217 250 SE15 alignment trimmed tree collapsed 0.270 1.412
544 139 hypothetical protein 4216 3 SE15 alignment trimmed tree 0.000 0.000
545 139 hypothetical protein 279 722 2276 3556 2026 4164 132 HS alignment trimmed tree collapsed 0.109 0.517
546 140 FIG00638312: hypothetical protein 4659 4520 180 ETEC H10407 alignment trimmed tree collapsed 0.842 4.546
547 140 hypothetical protein 2188 4 MS 200-1 alignment trimmed tree collapsed 0.026 0.000
548 140 hypothetical protein 7 MS 200-1 alignment trimmed tree collapsed 0.007 2.449
549 140 Antitermination protein Q 173 4839 2791 3090 196 EC4100B alignment trimmed tree collapsed 1.186 1.976
550 140 Putative cytoplasmic protein 1126 2790 332 B171 alignment trimmed tree collapsed 0.803 0.926
551 140 Phage-related protein 2789 54 S88 alignment trimmed tree collapsed 0.004 1.826
552 140 Holliday junction resolvase / Crossover junction endodeoxyribonuclease rusA (EC 3.1.22.-) 271 1125 2788 395 E22 alignment trimmed tree collapsed 1.764 1.898
553 140 SOS-response repressor and protease LexA (EC 3.4.21.88) 1082 2787 2919 194 EC4100B alignment trimmed tree collapsed 1.044 1.525
554 140 DNA adenine methylase 2786 48 MS 84-1 alignment trimmed tree collapsed 0.015 0.935
555 140 FIG00641204: hypothetical protein 2785 21 S88 alignment trimmed tree collapsed 0.000 0.712
556 140 Primosomal protein I 2784 55 EC4100B alignment trimmed tree collapsed 0.015 0.838
557 140 FIG00638770: hypothetical protein 2783 36 S88 alignment trimmed tree collapsed 0.042 0.663
558 140 putative antirepressor 2782 20 EC4100B alignment trimmed tree collapsed 0.267 0.880
559 140 FIG00639585: hypothetical protein 2781 72 EC4100B alignment trimmed tree collapsed 0.056 0.286
560 140 COG1396: Predicted transcriptional regulators 27 S88 alignment trimmed tree collapsed 0.000 0.792
561 140 regulatory protein cI 4995 2780 4203 80 EC4100B alignment trimmed tree collapsed 1.072 0.086
562 140 hypothetical protein 154 2779 4944 72 EC4100B alignment trimmed tree collapsed 0.061 0.059
563 140 COG5532: Uncharacterized conserved protein 153 2778 4943 66 M605 alignment trimmed tree collapsed 0.018 0.220
564 140 Hypothetical protein yfdR 2777 88 EC4100B alignment trimmed tree collapsed 0.027 0.519
565 140 Eae protein 2776 46 EC4100B alignment trimmed tree collapsed 0.077 0.106
566 140 FIG00642858: hypothetical protein 2775 17 E22 alignment trimmed tree collapsed 1.620 0.543
567 140 FIG00641267: hypothetical protein 2774 13 EC4100B alignment trimmed tree collapsed 0.075 0.322
568 140 Phage EaA protein 150 4940 21 EC4100B alignment trimmed tree collapsed 1.394 0.789
569 141 IncI1 plasmid conjugative transfer protein TraX 4001 23 O157:H7 str. EC4401 alignment trimmed tree collapsed 0.010 0.770
570 141 IncI1 plasmid conjugative transfer protein TraW 4000 24 MS 107-1 alignment trimmed tree collapsed 0.013 0.527
571 141 IncI1 plasmid conjugative transfer protein TraV 3999 13 MS 124-1 alignment trimmed tree collapsed 0.014 0.908
572 141 IncI1 plasmid conjugative transfer protein TraU 19 SE11 alignment trimmed tree collapsed 0.011 0.712
573 141 IncI1 plasmid conjugative transfer protein TraT 2482 17 TA206 alignment trimmed tree collapsed 0.032 0.316
574 141 IncI1 plasmid conjugative transfer protein TraS 2481 22 W alignment trimmed tree collapsed 0.015 0.611
575 141 IncI1 plasmid conjugative transfer protein TraR 2480 23 MS 124-1 alignment trimmed tree collapsed 0.046 0.861
576 141 IncI1 plasmid conjugative transfer protein TraP 1
577 141 IncI1 plasmid conjugative transfer protein TraO 4895 23 W alignment trimmed tree collapsed 0.608 0.822
578 141 IncI1 plasmid conjugative transfer protein TraN 4896 17 O157:H7 str. EC4401 alignment trimmed tree collapsed 0.231 0.275
579 141 IncI1 plasmid conjugative transfer protein TraM 4897 21 MS 84-1 alignment trimmed tree collapsed 0.413 0.819
580 141 IncI1 plasmid conjugative transfer protein TraL 4898 19 W alignment trimmed tree collapsed 0.000 0.676
581 141 IncI1 plasmid conjugative transfer DNA primase 12 KO11 alignment trimmed tree collapsed 0.021 0.781
582 141 IncI1 plasmid conjugative transfer DNA primase 1
583 141 IncI1 plasmid conjugative transfer DNA primase 4900 20 E22 alignment trimmed tree collapsed 0.282 0.245
584 141 IncI1 plasmid conjugative transfer DNA primase 1
585 141 hypothetical protein 1
586 141 Plasmid conjugative transfer endonuclease 4902 7 SE11 alignment trimmed tree collapsed 0.035 1.531
587 141 IncI1 plasmid conjugative transfer protein TraJ, related to pilus biogenesis/retracton protein 4903 21 TA206 alignment trimmed tree collapsed 0.000 0.780
588 141 IncI1 plasmid conjugative transfer protein TraI 4904 18 O157:H7 str. EC4486 alignment trimmed tree collapsed 0.004 0.619
589 141 IncI1 plasmid conjugative transfer protein TraH 4905 18 W alignment trimmed tree collapsed 0.000 0.627
590 141 IncI1 plasmid conjugative transfer protein TraG 4906 11 MS 84-1 alignment trimmed tree collapsed 0.000 0.323
591 141 IncI1 plasmid conjugative transfer protein TraF 4907 22 B7A alignment trimmed tree collapsed 0.005 0.746
592 141 IncI1 plasmid conjugative transfer protein TraE 4908 23 O157:H7 str. EC4024 alignment trimmed tree collapsed 0.011 0.737
593 141 Shufflon-specific DNA recombinase 4909 18 O157:H7 str. EC4024 alignment trimmed tree collapsed 0.335 0.088
594 141 hypothetical protein 1
595 141 IncI1 plasmid conjugative transfer pilus-tip adhesin protein PilV 2316 13 O157:H7 str. EC4024 alignment trimmed tree collapsed 0.098 0.382
596 141 IncI1 plasmid conjugative transfer pilus-tip adhesin protein PilV 5 MS 107-1 alignment trimmed tree collapsed 0.533 0.694
597 141 IncI1 plasmid conjugative transfer prepilin PilS 21 W alignment trimmed tree collapsed 0.289 1.495
598 141 IncI1 plasmid conjugative transfer inner membrane protein PilR 1729 31 E22 alignment trimmed tree collapsed 0.000 0.448
599 141 IncI1 plasmid conjugative transfer ATPase PilQ 2816 22 W alignment trimmed tree collapsed 0.030 0.717
600 141 IncI1 plasmid pilus assembly protein PilP 2817 14 W alignment trimmed tree collapsed 0.000 0.723
601 141 IncI1 plasmid pilus assembly protein PilO 2818 12 W alignment trimmed tree collapsed 0.023 2.010
602 142 FIG00642355: hypothetical protein 4373 5 ED1a alignment trimmed tree collapsed 0.029 0.518
603 142 FIG00642591: hypothetical protein 4374 4 ED1a alignment trimmed tree collapsed 0.077 0.000
604 142 FIG00642687: hypothetical protein 1
605 142 Phage antitermination protein N 4378 12 O157:H7 EDL933 alignment trimmed tree collapsed 0.023 0.430
606 142 FIG00644666: hypothetical protein 4379 8 ED1a alignment trimmed tree collapsed 0.000 0.765
607 142 FIG00640109: hypothetical protein 4380 19 ED1a alignment trimmed tree collapsed 0.765 1.940
608 142 hypothetical protein 2 CFT073 alignment trimmed
609 142 prophage repressor CI 164 4381 68 MS 119-7 alignment trimmed tree collapsed 0.016 0.704
610 143 COG3515: Uncharacterized protein conserved in bacteria 5 042 alignment trimmed tree collapsed 0.297 0.564
611 144 putative membrane protein 1537 11 E2348/69 alignment trimmed tree collapsed 0.387 1.849
612 144 putative membrane protein 1
613 144 putative regulatory protein 1536 24 E2348/69 alignment trimmed tree collapsed 0.381 0.063
614 144 Hyphotheical protein 1535 6 E2348/69 alignment trimmed tree collapsed 0.028 0.678
615 144 hypothetical protein 1534 2 alignment trimmed
616 144 Integrase 393 3049 5408 1533 3044 4073 4635 235 E2348/69 alignment trimmed tree collapsed 0.082 0.402
617 144 Integrase 28 MS 146-1 alignment trimmed tree collapsed 2.481 2.714
618 145 putative antirepressor protein 3506 34 B354 alignment trimmed tree collapsed 0.024 0.474
619 145 FIG00643210: hypothetical protein 3 S88 alignment trimmed tree collapsed 0.036 1.414
620 145 FIG00640585: hypothetical protein 3507 8 O83:H1 str. NRG 857C alignment trimmed tree collapsed 0.022 0.376
621 145 hypothetical protein 1
622 145 hypothetical protein 3508 2 alignment trimmed
623 145 Phage DNA transfer protein 3509 10 O26:H11 str. 11368 alignment trimmed tree collapsed 1.359 0.823
624 145 Phage DNA transfer protein 13 MS 21-1 alignment trimmed tree collapsed 1.204 1.366
625 145 Phage DNA transfer protein 63 O26:H11 str. 11368 alignment trimmed tree collapsed 0.708 0.308
626 145 Phage DNA transfer protein 3513 55 W alignment trimmed tree collapsed 0.301 1.305
627 146 MchC protein 8 ABU 83972 alignment trimmed tree collapsed 0.008 0.934
628 146 MchD protein 3164 7 ABU 83972 alignment trimmed tree collapsed 0.000 1.581
629 146 Microcin H47 secretion protein mchE 3163 16 CFT073 alignment trimmed tree collapsed 0.000 0.512
630 146 Microcin H47 secretion protein mchE 3163 45 042 alignment trimmed tree collapsed 2.541 0.605
631 146 Probable microcin H47 secretion/processing ATP-binding protein mchF (EC 3.4.22.-) 3162 14 042 alignment trimmed tree collapsed 0.020 0.323
632 146 Probable microcin H47 secretion/processing ATP-binding protein mchF (EC 3.4.22.-) 4732 5141 418 1400 3162 324 042 alignment trimmed tree collapsed 2.591 3.072
633 147 FIG00643874: hypothetical protein 1820 15 B7A alignment trimmed tree collapsed 0.323 0.789
634 147 hypothetical protein 5 MS 187-1 alignment trimmed tree collapsed 1.073 0.751
635 147 FIG00242661: hypothetical protein 2145 6 2362-75 alignment trimmed tree collapsed 0.000 0.707
636 147 hypothetical protein 2144 5 MS 187-1 alignment trimmed tree collapsed 0.112 0.541
637 148 Molybdate metabolism regulator 113 KO11 alignment trimmed tree collapsed 0.003 0.732
638 148 Putative regulator 112 MS 107-1 alignment trimmed tree collapsed 0.074 0.346
639 148 hypothetical protein 4482 127 B7A alignment trimmed tree collapsed 0.000 0.119
640 148 FIG00638293: hypothetical protein 4481 94 MS 145-7 alignment trimmed tree collapsed 0.034 1.173
641 148 Mg-chelatase subunit ChlD 4480 128 IAI1 alignment trimmed tree collapsed 0.011 0.109
642 148 YehQ protein 4479 108 MS 124-1 alignment trimmed tree collapsed 0.042 0.854
643 149 hypothetical protein 1204 6 SE15 alignment trimmed tree collapsed 0.000 0.447
644 149 FIG00638672: hypothetical protein 1205 11 55989 alignment trimmed tree collapsed 0.000 0.898
645 149 FIG00640576: hypothetical protein 1206 7 55989 alignment trimmed tree collapsed 0.000 0.632
646 149 Antirestriction protein 1207 4 55989 alignment trimmed tree 0.000 0.000
647 149 hypothetical protein 1208 6 55989 alignment trimmed tree collapsed 0.000 0.447
648 149 FIG00641897: hypothetical protein 1209 77 55989 alignment trimmed tree collapsed 0.965 3.300
649 149 FIG00639272: hypothetical protein 2 SE15 alignment trimmed
650 149 Insertion element IS1 protein insB 105 655 727 2111 2317 2676 3197 3499 3909 4596 4640 4980 5064 437 B7A alignment trimmed tree collapsed 0.001 0.431
651 149 IS1 orfA 106 276 728 2110 2318 3196 3500 3908 4477 4979 5065 5199 4747 4813 779 53638 alignment trimmed tree collapsed 0.053 0.325
652 149 MloA 4509 5 SE15 alignment trimmed tree 0.000 0.000
653 149 FIG141751: hypothetical protein in PFGI-1-like cluster 7 55989 alignment trimmed tree collapsed 0.000 0.872
654 149 Putative glycoportein 7 CFT073 alignment trimmed tree collapsed 0.033 0.774
655 149 IS1 ORF2 105 2676 4596 4640 216 B171 alignment trimmed tree collapsed 0.132 2.853
656 149 hypothetical protein 20 536 alignment trimmed tree collapsed 0.347 3.341
657 149 RpiR family transcriptional regulator 2842 2991 2629 3723 4677 317 55989 alignment trimmed tree collapsed 2.019 2.493
658 149 PTS system, maltose and glucose-specific IIC component (EC 2.7.1.69) / PTS system, maltose and glucose-specific IIB component (EC 2.7.1.69) 3722 10 55989 alignment trimmed tree collapsed 0.999 0.159
659 149 PTS system, maltose and glucose-specific IIC component (EC 2.7.1.69) / PTS system, maltose and glucose-specific IIB component (EC 2.7.1.69) 3670 5026 691 3722 3941 4023 427 55989 alignment trimmed tree collapsed 1.544 0.895
660 149 N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9) 1807 890 3721 140 55989 alignment trimmed tree collapsed 0.953 4.040
661 149 hypothetical protein 1
662 149 FIG00639234: hypothetical protein 3719 5 SE15 alignment trimmed tree 0.000 0.000
663 149 Transposase 291 2394 3718 65 SE15 alignment trimmed tree collapsed 0.107 1.176
664 149 Transposase 3717 31 55989 alignment trimmed tree collapsed 0.116 1.728
665 149 FIG00641357: hypothetical protein 3716 9 042 alignment trimmed tree collapsed 0.000 1.118
666 149 Transcriptional regulator, LacI family 942 970 3714 821 1198 1860 3715 321 SE15 alignment trimmed tree collapsed 2.579 1.668
667 149 PTS system, IIA component, possible mannitol permease (EC 2.7.1.69) 893 1472 1790 2463 2800 875 2997 3714 4157 4431 696 042 alignment trimmed tree collapsed 2.213 0.627
668 149 Putative sugar phosphotransferase component II B 892 1127 3713 146 042 alignment trimmed tree collapsed 2.038 1.486
669 149 Putative integral membrane protein 3712 22 TA271 alignment trimmed tree collapsed 0.000 0.319
670 149 unknown in ISEc8 210 356 416 682 979 2517 3445 4488 4616 263 SE15 alignment trimmed tree collapsed 0.402 0.419
671 149 Putative uncharacterized protein STY3991 4617 26 MS 45-1 alignment trimmed tree collapsed 0.000 0.565
672 149 Putative uncharacterized protein STY3991 4617 28 MS 45-1 alignment trimmed tree collapsed 0.018 2.916
673 149 Homolog of fucose/glucose/galactose permeases 2697 3810 151 042 alignment trimmed tree collapsed 1.311 2.186
674 149 Ribokinase (EC 2.7.1.15) 1286 1464 2203 2776 3786 3840 294 667 853 2527 3864 4435 4619 774 CFT073 alignment trimmed tree collapsed 1.434 0.024
675 149 Deoxyribose operon repressor, DeoR family 1285 1711 2569 3838 4045 4684 80 296 666 749 2961 3767 4620 859 55989 alignment trimmed tree collapsed 2.883 2.311
676 149 hypothetical 1554 676 4621 164 042 alignment trimmed tree collapsed 0.000 2.731
677 149 FIG00642308: hypothetical protein 4622 12 H299 alignment trimmed tree collapsed 0.235 2.173
678 149 FIG00639968: hypothetical protein 4623 20 CFT073 alignment trimmed tree collapsed 0.028 3.000
679 149 hypothetical protein 4624 7 55989 alignment trimmed tree collapsed 0.000 0.595
680 149 Transposase 116 163 55989 alignment trimmed tree collapsed 0.061 0.491
681 149 unknown in ISEc8 115 209 714 2516 3560 4167 4487 4544 4627 734 H591 alignment trimmed tree collapsed 0.042 0.179
682 149 COG2963: Transposase and inactivated derivatives 210 979 2517 3445 4488 452 H591 alignment trimmed tree collapsed 1.504 0.652
683 149 FIG00640055: hypothetical protein 1836 2375 4868 137 55989 alignment trimmed tree collapsed 0.997 4.669
684 149 FIG00644296: hypothetical protein 4869 6 55989 alignment trimmed tree 0.000 0.000
685 149 Transcriptional regulator, TetR family 3702 4648 4870 133 55989 alignment trimmed tree collapsed 1.806 3.953
686 149 FIG00639225: hypothetical protein 4871 16 E24377A alignment trimmed tree collapsed 0.000 0.526
687 149 Secondary glycine betaine transporter BetU 5462 3724 4872 143 MS 119-7 alignment trimmed tree collapsed 1.004 2.117
688 149 IS600 orfB 824 977 1197 1210 1225 3060 3497 4337 1274 3483 1551 O157:H7 str. EC4113 alignment trimmed tree collapsed 2.088 0.290
689 149 COG2801: Transposase and inactivated derivatives 16 MS 175-1 alignment trimmed tree collapsed 0.004 0.837
690 149 Lipid A biosynthesis (KDO) 2-(lauroyl)-lipid IVA acyltransferase (EC 2.3.1.-) 3943 278 2974 184 55989 alignment trimmed tree collapsed 0.626 1.382
691 149 Lipid A biosynthesis (KDO) 2-(lauroyl)-lipid IVA acyltransferase (EC 2.3.1.-) 2793 4371 278 1622 2385 2974 432 55989 alignment trimmed tree collapsed 0.392 2.100
692 149 Virulence factor VirK 277 23 55989 alignment trimmed tree collapsed 0.007 0.452
693 149 Hexosyltransferase homolog 3118 276 2854 172 101-1 alignment trimmed tree collapsed 2.605 1.296
694 149 Polysaccharide deacetylase 275 53 MS 116-1 alignment trimmed tree collapsed 0.499 0.560
695 149 IS911 orfA 689 2511 3058 3495 274 1272 407 042 alignment trimmed tree collapsed 0.058 0.930
696 149 Transposase 985 1193 1215 1229 2402 138 E24377A alignment trimmed tree collapsed 0.000 2.152
697 149 hypothetical protein 986 1194 1214 1228 2401 43 SE15 alignment trimmed tree collapsed 0.028 1.537
698 149 FIG00644055: hypothetical protein 987 1195 1213 1227 2400 39 IAI39 alignment trimmed tree 0.000 0.000
699 149 Retron-type reverse transcriptase 1196 1226 90 55989 alignment trimmed tree collapsed 0.004 0.156
700 149 FIG00642839: hypothetical protein 482 17 W3110 alignment trimmed tree collapsed 0.000 0.589
701 149 hypothetical protein 1
702 149 Iron(III) dicitrate transport ATP-binding protein FecE (TC 3.A.1.14.1) 2837 5279 5718 4 1815 2082 804 K12 alignment trimmed tree collapsed 1.760 0.902
703 149 FIG00638432: hypothetical protein 484 42 MS 182-1 alignment trimmed tree collapsed 0.000 0.485
704 149 Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) 485 181 042 alignment trimmed tree collapsed 0.000 0.616
705 149 Iron(III) dicitrate transport system permease protein FecC (TC 3.A.1.14.1) 486 91 H299 alignment trimmed tree collapsed 1.444 0.731
706 149 Iron(III) dicitrate transport system, periplasmic iron-binding protein FecB (TC 3.A.1.14.1) 487 58 55989 alignment trimmed tree collapsed 0.000 1.202
707 149 Iron(III) dicitrate transport protein FecA 989 4490 105 55989 alignment trimmed tree collapsed 0.006 0.894
708 149 Iron(III) dicitrate transport protein FecA 1
709 149 Iron(III) dicitrate transmembrane sensor protein FecR 2753 59 ABU 83972 alignment trimmed tree collapsed 0.006 2.068
710 149 Iron(III) dicitrate transmembrane sensor protein FecR 1
711 149 RNA polymerase sigma factor FecI 2752 59 MS 185-1 alignment trimmed tree collapsed 0.000 0.136
712 149 FIG00640454: hypothetical protein 4847 31 MS 116-1 alignment trimmed tree collapsed 0.002 0.301
713 149 Transposase 116 4166 362 O26:H11 str. 11368 alignment trimmed tree collapsed 0.007 0.438
714 149 hypothetical protein 115 209 681 2516 3560 4167 4487 4544 4627 725 O157:H7 EDL933 alignment trimmed tree collapsed 0.026 0.453
715 149 unknown 210 4488 323 O157:H7 str. EC869 alignment trimmed tree collapsed 0.000 0.409
716 149 hypothetical protein 717 2268 3551 3552 149 B7A alignment trimmed tree collapsed 0.059 0.923
717 149 FIG00639161: hypothetical protein 716 2269 3551 3552 148 55989 alignment trimmed tree collapsed 2.165 1.085
718 149 Intergenic-region protein 24 3553 157 042 alignment trimmed tree collapsed 1.377 0.657
719 149 FIG00642631: hypothetical protein 345 10 HS alignment trimmed tree 0.000 0.000
720 149 Haemolysin expression modulating protein paralog 84 524 2273 5154 344 1081 1411 3514 4176 277 B171 alignment trimmed tree collapsed 0.089 0.026
721 149 FIG00638000: hypothetical protein 2 042 alignment trimmed
722 149 hypothetical protein 3556 2026 4164 111 HS alignment trimmed tree collapsed 0.032 0.489
723 149 unknown 284 4143 15 042 alignment trimmed tree collapsed 0.000 0.425
724 149 FIG00641738: hypothetical protein 4144 9 E110019 alignment trimmed tree collapsed 0.000 0.535
725 149 hypothetical protein 4145 21 55989 alignment trimmed tree collapsed 0.121 2.192
726 149 FIG00638471: hypothetical protein 20 042 alignment trimmed tree collapsed 0.033 0.260
727 149 Insertion element IS1 protein insB 105 655 2111 2317 2676 3197 4596 4640 4980 5064 426 E110019 alignment trimmed tree collapsed 1.579 0.404
728 149 Insertion element iso-IS1d protein insA 106 276 651 2110 2318 3196 3500 3908 4477 4979 5065 5199 4747 4813 779 53638 alignment trimmed tree collapsed 0.054 0.265
729 149 mannose-specific adhesin FimH 4253 41 1597 275 ED1a alignment trimmed tree collapsed 0.001 0.431
730 149 Fructuronate transporter GntP 971 1993 2019 42 1199 1747 2685 3201 562 HS alignment trimmed tree collapsed 1.246 0.069
731 149 Mannonate dehydratase (EC 4.2.1.8) 43 131 KO11 alignment trimmed tree collapsed 0.000 0.066
732 149 D-mannonate oxidoreductase (EC 1.1.1.57) 3253 4273 4304 522 2881 3793 533 55989 alignment trimmed tree collapsed 0.814 0.624
733 149 FIG00638238: hypothetical protein 45 41 042 alignment trimmed tree collapsed 0.016 0.229
734 149 Uxu operon transcriptional regulator 2253 4302 46 3678 3702 3791 516 SE11 alignment trimmed tree collapsed 0.000 1.124
735 149 Uncharacterized protein YjiC 47 95 55989 alignment trimmed tree collapsed 0.066 0.466
736 149 orf; Unknown function 95 82 55989 alignment trimmed tree collapsed 0.000 0.889
737 149 hypothetical protein 96 99 042 alignment trimmed tree collapsed 0.023 0.384
738 149 YjiD protein 97 123 E24377A alignment trimmed tree collapsed 0.242 0.444
739 149 Putative transcriptional regulator LYSR-type 1392 2823 18 98 1115 2018 2190 673 MS 116-1 alignment trimmed tree collapsed 0.004 0.072
740 149 Isoaspartyl dipeptidase (EC 3.4.19.5) @ Asp-X dipeptidase 99 128 55989 alignment trimmed tree collapsed 0.013 1.140
741 149 Putative membrane protein 100 130 F11 alignment trimmed tree collapsed 0.025 6.584
742 149 Putative membrane protein 100 130 53638 alignment trimmed tree collapsed 0.009 2.514
743 149 hypothetical protein 101 130 W alignment trimmed tree collapsed 0.000 0.210
744 149 hypothetical protein 101 129 W alignment trimmed tree collapsed 0.000 0.199
745 149 FIG00639355: hypothetical protein 102 76 55989 alignment trimmed tree collapsed 0.085 0.232
746 149 RNA:NAD 2'-phosphotransferase 103 84 E22 alignment trimmed tree collapsed 0.006 0.467
747 149 Putative transport protein 104 126 TA271 alignment trimmed tree collapsed 0.006 0.392
748 149 hypothetical protein 105 125 MS 84-1 alignment trimmed tree collapsed 0.000 0.261
749 149 hypothetical protein 106 125 ATCC 8739 alignment trimmed tree collapsed 0.131 0.499
750 149 hypothetical protein 107 129 IAI1 alignment trimmed tree collapsed 0.012 1.224
751 149 FIG00638031: hypothetical protein 108 128 O103:H2 str. 12009 alignment trimmed tree collapsed 0.011 0.135
752 149 Putative inner membrane protein 109 128 MS 145-7 alignment trimmed tree collapsed 0.008 0.278
753 149 Multidrug translocase MdfA 110 105 IAI1 alignment trimmed tree collapsed 0.010 0.167
754 149 FIG00641054: hypothetical protein 111 28 O26:H11 str. 11368 alignment trimmed tree collapsed 0.092 0.369
755 149 FIG00638024: hypothetical protein 378 1988 3325 3386 50 2422 2690 3105 4052 509 55989 alignment trimmed tree collapsed 0.983 0.531
756 149 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) 4181 51 4841 202 55989 alignment trimmed tree collapsed 1.402 1.240
757 149 hypothetical protein 72 WV_060327 alignment trimmed tree collapsed 0.019 0.686
758 149 hypothetical protein 764 53 90 O157:H7 EDL933 alignment trimmed tree collapsed 0.000 0.651
759 149 COG1479: Uncharacterized conserved protein 54 39 O26:H11 str. 11368 alignment trimmed tree collapsed 0.005 0.193
760 149 FIG00638399: hypothetical protein 55 88 O157:H7 str. EC4486 alignment trimmed tree collapsed 0.000 0.805
761 149 Type I restriction-modification system, specificity subunit S (EC 3.1.21.3) 56 51 55989 alignment trimmed tree collapsed 1.004 0.271
762 149 Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) 57 53 MS 107-1 alignment trimmed tree collapsed 0.005 0.144
763 149 Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) 58 49 55989 alignment trimmed tree collapsed 0.000 0.069
764 149 FIG00638723: hypothetical protein 1
765 149 FIG00638723: hypothetical protein 59 50 O157:H7 str. EC869 alignment trimmed tree collapsed 0.008 0.701
766 149 Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family 60 130 str. K-12 substr. MG1655 alignment trimmed tree collapsed 0.006 0.885
767 149 COG2879, Hypothetical small protein yjiX 5290 61 409 265 W3110 alignment trimmed tree collapsed 0.325 0.306
768 149 hypothetical protein 62 2 alignment trimmed
769 149 Carbon starvation protein A 5289 63 410 259 TA206 alignment trimmed tree collapsed 0.003 0.836
770 149 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) 65 4680 251 B354 alignment trimmed tree collapsed 0.576 0.460
771 149 D-galactonate transporter 993 1551 1578 66 673 700 3576 358 MS 69-1 alignment trimmed tree collapsed 2.692 0.698
772 149 Regulator of L-galactonate catabolism YjjM 1
773 149 Sorbitol dehydrogenase (EC 1.1.1.14) 1494 2973 3842 68 2255 2613 3067 3795 563 B7A alignment trimmed tree collapsed 0.079 1.042
774 149 Sorbitol dehydrogenase (EC 1.1.1.14) 68 162 MS 45-1 alignment trimmed tree collapsed 0.017 0.501
775 149 Phosphoglycerol transferase I (EC 2.7.8.20) 69 125 WV_060327 alignment trimmed tree collapsed 0.010 0.044
776 149 Putative glycoprotein/receptor 70 129 MS 182-1 alignment trimmed tree collapsed 0.007 1.031
777 149 DNA replication protein DnaC 387 71 2985 257 O111:H- str. 11128 alignment trimmed tree collapsed 0.661 0.371
778 149 DNA replication protein DnaC 387 71 2985 254 55989 alignment trimmed tree collapsed 0.914 0.480
779 149 Primosomal protein I 72 133 042 alignment trimmed tree collapsed 0.006 0.855
780 149 FIG001826: putative inner membrane protein 73 121 55989 alignment trimmed tree collapsed 0.019 1.706
781 149 FIG023911: putative membrane protein 74 122 O26:H11 str. 11368 alignment trimmed tree collapsed 0.004 0.727
782 149 Putative regulator 75 112 O157:H7 str. EC508 alignment trimmed tree collapsed 0.000 0.699
783 149 Transcriptional activator protein bglJ 76 116 55989 alignment trimmed tree collapsed 0.005 0.439
784 149 Ferric reductase (1.6.99.14) 77 130 55989 alignment trimmed tree collapsed 0.015 1.185
785 149 FIG00638078: hypothetical protein 78 121 042 alignment trimmed tree collapsed 0.046 1.034
786 149 Ribosomal RNA small subunit methyltransferase C (EC 2.1.1.52) 1963 130 SE15 alignment trimmed tree collapsed 0.007 0.800
787 149 DNA polymerase III psi subunit (EC 2.7.7.7) 1962 129 O157:H7 str. EC4113 alignment trimmed tree collapsed 0.008 0.851
788 149 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) 1961 128 IAI39 alignment trimmed tree collapsed 0.007 1.158
789 149 5'-nucleotidase YjjG (EC 3.1.3.5) 1960 133 B7A alignment trimmed tree collapsed 0.005 0.811
790 149 Peptide chain release factor 3 1959 131 M605 alignment trimmed tree collapsed 0.000 0.613
791 149 Osmotically inducible protein OsmY 1958 133 APEC O1 alignment trimmed tree collapsed 0.014 2.763
792 149 probable exported protein YPO0432 1957 129 042 alignment trimmed tree 0.000 0.000
793 149 hypothetical protein 1956 133 55989 alignment trimmed tree collapsed 0.006 0.132
794 149 Putative deoxyribonuclease YjjV 1252 796 1306 383 55989 alignment trimmed tree collapsed 2.277 1.475
795 149 radical activating enzyme 1954 64 55989 alignment trimmed tree collapsed 0.026 0.121
796 149 FIG00638118: hypothetical protein 1953 108 55989 alignment trimmed tree collapsed 0.013 1.747
797 149 hypothetical protein 1952 124 B088 alignment trimmed tree collapsed 0.000 0.375
798 149 Deoxyribose-phosphate aldolase (EC 4.1.2.4) 1951 132 O157:H7 alignment trimmed tree collapsed 0.000 0.630
799 149 Thymidine phosphorylase (EC 2.4.2.4) 1950 132 WV_060327 alignment trimmed tree collapsed 0.000 0.384
800 149 Phosphopentomutase (EC 5.4.2.7) 1948 1484 1949 235 WV_060327 alignment trimmed tree collapsed 0.000 0.886
801 149 Purine nucleoside phosphorylase (EC 2.4.2.1) 1244 804 1948 267 O157:H7 str. EC4401 alignment trimmed tree collapsed 0.000 0.303
802 149 hypothetical protein 1947 105 101-1 alignment trimmed tree collapsed 0.039 0.246
803 149 Lipoate-protein ligase A 129 E22 alignment trimmed tree collapsed 0.010 0.607
804 149 Lipoate-protein ligase A 2078 129 O157:H7 str. FRIK2000 alignment trimmed tree collapsed 0.000 0.521
805 149 Phosphoserine phosphatase (EC 3.1.3.3) 2077 127 ATCC 8739 alignment trimmed tree collapsed 0.000 0.620
806 149 DNA repair protein RadA 2076 129 MS 198-1 alignment trimmed tree collapsed 0.000 0.546
807 149 NadR transcriptional regulator / Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1) / Ribosylnicotinamide kinase (EC 2.7.1.22) 2075 131 O103:H2 str. 12009 alignment trimmed tree collapsed 0.003 0.579
808 149 putative regulatory protein 2074 86 MS 175-1 alignment trimmed tree collapsed 0.181 1.749
809 149 ABC transporter, ATP-binding protein 2073 133 FVEC1302 alignment trimmed tree collapsed 0.000 0.639
810 149 FIG00639885: hypothetical protein 2072 63 O127:H6 str. E2348/69 alignment trimmed tree collapsed 0.000 0.674
811 149 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) 2071 132 55989 alignment trimmed tree collapsed 0.006 1.747
812 149 Transcriptional repressor protein TrpR 2070 130 ED1a alignment trimmed tree collapsed 0.010 0.549
813 149 Inosine/xanthosine triphosphatase (EC 3.6.1.-) 2030 127 str. K-12 substr. MG1655 alignment trimmed tree collapsed 0.000 1.055
814 149 Phosphoglycerate mutase (EC 5.4.2.1) 2031 133 ATCC 8739 alignment trimmed tree collapsed 0.000 0.098
815 149 Right origin-binding protein 2032 3737 225 O55:H7 str. CB9615 alignment trimmed tree collapsed 0.000 0.719
816 149 Conserved uncharacterized protein CreA 2033 134 O55:H7 str. CB9615 alignment trimmed tree collapsed 0.000 0.087
817 149 Two-component response regulator CreB 820 1159 1980 2084 2102 3161 3503 3655 4458 5040 5082 5259 265 467 1455 1706 1775 2034 2037 2248 2332 2397 3308 3432 3539 3583 3748 1793 55989 alignment trimmed tree collapsed 1.946 0.349
818 149 Two-component response regulator CreC 2368 2035 2249 259 SE11 alignment trimmed tree collapsed 1.384 0.811
819 149 Inner membrane protein CreD 2036 124 O26:H11 str. 11368 alignment trimmed tree collapsed 0.023 0.105
820 149 Aerobic respiration control protein arcA 817 1159 1980 2084 2102 3161 3503 3655 4458 5040 5082 5259 265 467 1455 1706 1775 2034 2037 2248 2332 2397 3308 3432 3539 3583 3748 1793 O157:H7 str. Sakai alignment trimmed tree collapsed 2.808 0.412
821 149 hypothetical protein 3496 8 TA271 alignment trimmed tree collapsed 0.000 0.378
822 149 RNA methyltransferase, TrmH family, group 1 126 B171 alignment trimmed tree collapsed 0.005 0.850
823 150 IS3 putative transposase 689 3497 4337 3483 287 O111:H- str. 11128 alignment trimmed tree collapsed 0.013 0.659
824 150 IS3 putative transposase 3060 3497 4337 1274 3483 853 E110019 alignment trimmed tree collapsed 1.819 1.450
825 151 hypothetical protein 2207 11 55989 alignment trimmed tree collapsed 0.000 0.221
826 151 Per-activated serine protease autotransporter enterotoxin EspC 2520 2551 77 55989 alignment trimmed tree collapsed 0.606 0.307
827 151 Per-activated serine protease autotransporter enterotoxin EspC 64 55989 alignment trimmed tree collapsed 0.952 0.083
828 151 hypothetical protein 591 4604 4907 28 55989 alignment trimmed tree collapsed 0.302 1.098
829 151 hypothetical protein 1209 2514 48 55989 alignment trimmed tree collapsed 0.018 0.573
830 151 Putative superfamily I DNA helicases 4181 45 55989 alignment trimmed tree collapsed 0.019 1.266
831 151 Putative superfamily I DNA helicases 4181 22 55989 alignment trimmed tree collapsed 0.019 0.420
832 151 Integrase 393 2500 3509 5408 1533 3044 3503 4073 459 55989 alignment trimmed tree collapsed 0.886 0.887
833 151 Transcriptional regulator, TetR family 3469 129 E110019 alignment trimmed tree collapsed 0.006 1.986
834 151 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) 3470 132 MS 124-1 alignment trimmed tree collapsed 0.013 0.217
835 151 Periplasmic divalent cation tolerance protein cutA 3471 133 042 alignment trimmed tree collapsed 0.000 0.515
836 151 C4-dicarboxylate transporter DcuA 1169 2015 3472 3971 279 MS 84-1 alignment trimmed tree collapsed 1.422 0.331
837 151 Aspartate ammonia-lyase (EC 4.3.1.1) 3473 137 IAI39 alignment trimmed tree collapsed 0.000 0.150
838 151 FxsA protein 3474 119 O157:H7 str. EC4024 alignment trimmed tree collapsed 0.002 0.193
839 151 Inner membrane protein yjeH 3233 3475 262 TA143 alignment trimmed tree collapsed 0.000 0.951
840 151 Heat shock protein 60 family co-chaperone GroES 2010 136 MS 124-1 alignment trimmed tree collapsed 0.000 0.123
841 151 Heat shock protein 60 family chaperone GroEL 2009 134 042 alignment trimmed tree collapsed 0.000 0.129
842 151 probable membrane protein yjeI 2008 131 M718 alignment trimmed tree collapsed 0.000 0.238
843 151 Putative uncharacterized protein yjeJ 2007 133 B088 alignment trimmed tree collapsed 0.038 0.406
844 151 Lysine 2,3-aminomutase (EC 5.4.3.2) 2682 130 MS 107-1 alignment trimmed tree collapsed 0.018 0.537
845 151 Translation elongation factor P 3252 521 2681 265 SE11 alignment trimmed tree collapsed 1.474 0.989
846 151 Entericidin A precursor 847 2679 2680 263 MS 45-1 alignment trimmed tree collapsed 0.000 0.476
847 151 Entericidin B precursor 846 2679 2680 242 FVEC1302 alignment trimmed tree collapsed 0.540 0.921
848 151 Quaternary ammonium compound-resistance protein sugE 3465 3646 3647 2678 3530 3531 4233 539 CFT073 alignment trimmed tree collapsed 0.000 0.390
849 151 Outer membrane lipoprotein Blc 2677 146 B088 alignment trimmed tree collapsed 0.006 0.299
850 151 Beta-lactamase (EC 3.5.2.6) 2845 5388 2676 3340 4674 370 55989 alignment trimmed tree collapsed 2.442 0.405
851 151 Fumarate reductase subunit D 2675 135 APEC O1 alignment trimmed tree collapsed 0.009 0.365
852 151 Fumarate reductase subunit C 2674 133 W3110 alignment trimmed tree collapsed 0.000 0.315
853 151 Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) 4939 2673 263 B088 alignment trimmed tree collapsed 0.005 0.663
854 151 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) 2672 133 E110019 alignment trimmed tree collapsed 0.000 0.472
855 151 lysyl-tRNA synthetase( EC:6.1.1.6 ) 2553 1504 2671 3979 391 O157:H7 str. FRIK2000 alignment trimmed tree collapsed 1.477 1.411
856 151 Putative amino acid permease 2232 2670 4458 253 K12 alignment trimmed tree collapsed 0.028 0.835
857 151 FIG00639482: hypothetical protein 2669 38 E110019 alignment trimmed tree collapsed 0.000 0.556
858 151 FIG00639833: hypothetical protein 2668 46 DH1 alignment trimmed tree collapsed 0.187 0.285
859 151 Potassium efflux system KefA protein / Small-conductance mechanosensitive channel 2667 246 55989 alignment trimmed tree collapsed 1.434 0.628
860 151 Phosphatidylserine decarboxylase (EC 4.1.1.65) 2666 130 55989 alignment trimmed tree collapsed 0.010 1.103
861 151 Ribosome small subunit-stimulated GTPase EngC 2665 133 2362-75 alignment trimmed tree collapsed 0.000 0.767
862 151 3'-to-5' oligoribonuclease (orn) 2664 131 BL21(DE3) alignment trimmed tree collapsed 0.000 0.536
863 151 Iron-sulfur cluster-binding protein 2663 121 str. K-12 substr. DH10B alignment trimmed tree collapsed 0.012 0.870
864 151 YjeF protein, function unknown 2662 131 HS alignment trimmed tree collapsed 0.011 0.808
865 151 ATPase YjeE, predicted to have essential role in cell wall biosynthesis 2661 130 IAI1 alignment trimmed tree collapsed 0.007 0.499
866 151 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) 2660 127 M605 alignment trimmed tree collapsed 0.012 0.865
867 151 DNA mismatch repair protein MutL 2659 127 55989 alignment trimmed tree collapsed 0.002 0.614
868 151 tRNA delta(2)-isopentenylpyrophosphate transferase (EC 2.5.1.8) 2658 133 WV_060327 alignment trimmed tree collapsed 0.000 0.811
869 151 RNA-binding protein Hfq 2657 134 SE11 alignment trimmed tree collapsed 0.000 0.175
870 151 GTP-binding protein HflX 132 O157:H7 str. EC508 alignment trimmed tree collapsed 0.003 0.612
871 151 HflK protein 4043 137 E2348/69 alignment trimmed tree collapsed 0.002 1.134
872 151 HflC protein 4044 137 ED1a alignment trimmed tree collapsed 0.000 0.122
873 151 Putative inner membrane protein YjeT (clustered with HflC) 4045 137 B354 alignment trimmed tree collapsed 0.000 0.382
874 151 Adenylosuccinate synthetase (EC 6.3.4.4) 4046 128 101-1 alignment trimmed tree collapsed 0.000 0.177
875 151 Nitrite-sensitive transcriptional repressor NsrR 2959 2599 4047 269 MS 200-1 alignment trimmed tree collapsed 0.007 1.014
876 151 3'-to-5' exoribonuclease RNase R 130 MS 196-1 alignment trimmed tree collapsed 0.000 1.196
877 151 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-) 3012 1141 2650 265 TA280 alignment trimmed tree collapsed 1.428 0.988
878 151 Putative cytoplasmic protein 1140 123 B7A alignment trimmed tree collapsed 0.000 0.601
879 151 Putative alpha helical protein 1139 125 FVEC1302 alignment trimmed tree collapsed 0.000 0.680
880 151 hypothetical protein 1138 129 TA143 alignment trimmed tree collapsed 0.000 0.741
881 151 Membrane protein with DUF350 domain 1137 127 O157:H7 str. EC4486 alignment trimmed tree collapsed 0.013 4.953
882 151 FIG00637977: hypothetical protein 1136 122 55989 alignment trimmed tree collapsed 0.005 1.062
883 151 Similarity with glutathionylspermidine synthase (EC 6.3.1.8), group 1 2379 1135 2731 250 55989 alignment trimmed tree collapsed 0.846 1.235
884 151 Alkylation response protein AidB, acyl-CoA dehydrogenase family 1134 134 2362-75 alignment trimmed tree collapsed 0.005 0.638
885 151 Putative uncharacterized protein YjfN 1822 1133 2361 262 CFT073 alignment trimmed tree collapsed 0.000 0.893
886 151 Putative exported protein 1132 130 F11 alignment trimmed tree collapsed 0.000 0.920
887 151 YjfP protein 1131 136 55989 alignment trimmed tree collapsed 0.033 1.117
888 151 Ascorbate utilization transcriptional regulator UlaR, HTH-type 1285 1711 2003 2569 2605 3838 4045 80 296 666 749 1130 2961 3206 4389 1074 SE15 alignment trimmed tree collapsed 2.793 1.037
889 151 Probable L-ascorbate-6-phosphate lactonase UlaG (EC 3.1.1.-) (L-ascorbate utilization protein G) 1129 122 MS 69-1 alignment trimmed tree collapsed 0.000 0.704
890 151 Ascorbate-specific PTS system, EIIC component 1
891 151 Ascorbate-specific PTS system, EIIC component 1128 133 HS alignment trimmed tree collapsed 0.010 0.252
892 151 Ascorbate-specific PTS system, EIIB component (EC 2.7.1.69) 668 1127 3713 174 O157:H7 str. EC4196 alignment trimmed tree collapsed 0.000 0.580
893 151 Ascorbate-specific PTS system, EIIA component (EC 2.7.1.-) 667 1472 3714 4157 274 B171 alignment trimmed tree collapsed 0.007 0.242
894 151 3-keto-L-gulonate-6-phosphate decarboxylase UlaD (EC 4.1.1.85) (L-ascorbate utilization protein D) 1661 4864 232 CFT073 alignment trimmed tree collapsed 0.000 0.484
895 151 L-ribulose-5-phosphate 3-epimerase UlaE (EC 5.1.3.22) (L-ascorbate utilization protein E) 1662 2215 4863 228 MS 116-1 alignment trimmed tree collapsed 0.015 0.955
896 151 L-ribulose-5-phosphate 4-epimerase UlaF (EC 5.1.3.4) (L-ascorbate utilization protein F) 1663 5617 1570 2216 4862 364 55989 alignment trimmed tree collapsed 0.000 0.883
897 151 probable integral membrane protein Cj0014c 245 4861 120 55989 alignment trimmed tree collapsed 0.540 3.147
898 151 UPF0379 protein yjfY precursor 1822 2361 4860 261 042 alignment trimmed tree collapsed 1.320 0.610
899 151 SSU ribosomal protein S6p 4859 133 str. K-12 substr. MG1655 alignment trimmed tree collapsed 0.000 0.220
900 151 SSU ribosomal protein S18p 4858 133 TA271 alignment trimmed tree collapsed 0.000 0.124
901 151 LSU ribosomal protein L9p 4857 133 UM146 alignment trimmed tree 0.000 0.000
902 151 Uncharacterized protein yjfZ 4856 76 B088 alignment trimmed tree collapsed 0.079 0.337
903 151 putative transposase 73 1212A alignment trimmed tree collapsed 0.060 0.847
904 151 putative virulence protein 3869 4173 170 O157:H7 EDL933 alignment trimmed tree collapsed 0.020 0.387
905 151 Putative cell envelope opacity-associated protein A 1967 121 KO11 alignment trimmed tree collapsed 0.010 0.343
906 151 FKBP-type peptidyl-prolyl cis-trans isomerase fklB (EC 5.2.1.8) 1913 1966 4498 254 F11 alignment trimmed tree collapsed 1.348 0.316
907 151 D-serine/D-alanine/glycine transporter 1416 3071 4197 5264 5672 365 1094 1822 1965 2327 3294 820 1044A alignment trimmed tree collapsed 1.994 0.311
908 151 Nitric oxide-dependent regulator DnrN or NorA 1964 133 MS 182-1 alignment trimmed tree collapsed 0.000 0.992
909 151 Putative membrane protein 133 55989 alignment trimmed tree collapsed 0.024 0.548
910 151 NADPH:quinone oxidoreductase 2 ## possible protective/detoxification role 2987 134 MS 21-1 alignment trimmed tree collapsed 0.034 0.435
911 151 Redox-sensing transcriptional regulator QorR 2988 131 B7A alignment trimmed tree collapsed 0.017 0.538
912 151 2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16) 2989 124 KO11 alignment trimmed tree collapsed 0.000 0.119
913 151 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) 2990 134 101-1 alignment trimmed tree collapsed 0.005 0.847
914 151 Protein ytfJ precursor 2323 2991 3686 228 FVEC1412 alignment trimmed tree collapsed 0.000 0.807
915 151 hypothetical protein 2992 131 E24377A alignment trimmed tree 0.000 0.000
916 151 Putative membrane protein 2993 130 HS alignment trimmed tree collapsed 0.000 1.254
917 151 Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11) 2994 132 SMS-3-5 alignment trimmed tree collapsed 0.007 0.363
918 151 hypothetical protein 2995 78 MS 107-1 alignment trimmed tree collapsed 0.000 0.114
919 151 Uncharacterized protein YtfM precursor 124 O157:H7 str. EC4076 alignment trimmed tree collapsed 0.007 0.807
920 151 Uncharacterized protein YtfN 841 131 55989 alignment trimmed tree collapsed 0.010 0.361
921 151 UPF0131 protein YtfP 840 134 K12 alignment trimmed tree collapsed 0.000 0.123
922 151 Programmed cell death antitoxin ChpS 2670 839 3829 191 W alignment trimmed tree collapsed 1.442 0.437
923 151 Programmed cell death toxin ChpB 838 3830 199 IAI1 alignment trimmed tree collapsed 0.000 0.141
924 151 Inorganic pyrophosphatase (EC 3.6.1.1) 837 133 F11 alignment trimmed tree collapsed 0.012 0.815
925 151 Putative sugar ABC transport system, periplasmic binding protein YtfQ precursor 3994 836 1857 193 E110019 alignment trimmed tree collapsed 1.646 0.725
926 151 Putative sugar ABC transport system, ATP-binding protein YtfR (EC 3.6.3.17) 1461 2071 3263 3993 530 835 2530 752 55989 alignment trimmed tree collapsed 1.587 1.062
927 151 Putative sugar ABC transport system, permease protein YtfT 1462 834 2529 257 ATCC 8739 alignment trimmed tree collapsed 1.253 0.798
928 151 Putative sugar ABC transport system, permease protein YjfF 833 127 55989 alignment trimmed tree collapsed 0.016 1.136
929 151 Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) 832 134 IAI39 alignment trimmed tree collapsed 0.000 0.527
930 151 hypothetical protein 65 str. K-12 substr. DH10B alignment trimmed tree collapsed 0.023 0.468
931 151 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (EC 6.3.2.-) 831 133 55989 alignment trimmed tree collapsed 0.008 1.294
932 151 FIG138315: Putative alpha helix protein 830 134 F11 alignment trimmed tree collapsed 0.000 0.397
933 151 TldE/PmbA protein, part of proposed TldE/TldD proteolytic complex (PMID 12029038) 132 O157:H7 EDL933 alignment trimmed tree collapsed 0.000 0.837
934 151 Soluble cytochrome b562 828 123 HS alignment trimmed tree collapsed 0.038 2.605
935 151 Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) 827 129 FVEC1412 alignment trimmed tree collapsed 0.027 1.112
936 151 Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) 826 133 55989 alignment trimmed tree collapsed 0.002 0.255
937 151 hypothetical protein 825 109 536A alignment trimmed tree collapsed 0.000 0.440
938 151 FIG00640380: hypothetical protein 824 5 042 alignment trimmed tree collapsed 0.000 0.500
939 151 Trehalose-6-phosphate hydrolase (EC 3.2.1.93) 823 134 IAI1 alignment trimmed tree collapsed 0.027 0.672
940 151 PTS system, trehalose-specific IIB component (EC 2.7.1.69) / PTS system, trehalose-specific IIC component (EC 2.7.1.69) 822 152 E22 alignment trimmed tree collapsed 0.009 0.344
941 151 PTS system, trehalose-specific IIB component (EC 2.7.1.69) / PTS system, trehalose-specific IIC component (EC 2.7.1.69) 1609 2578 2844 822 3354 4362 4675 478 MS 107-1 alignment trimmed tree collapsed 2.476 0.456
942 151 Trehalose operon transcriptional repressor 666 970 1350 1465 2021 2229 2577 2778 3225 3714 4084 5358 499 821 1198 1436 1745 1860 1942 2526 3715 3862 4011 4361 4455 1319 E110019 alignment trimmed tree collapsed 2.592 0.711
943 151 Magnesium transporting ATPase, P-type 1 (EC 3.6.3.2) 820 129 55989 alignment trimmed tree collapsed 0.004 1.124
944 151 Transposase 1701 2333 2418 2580 3418 4780 5370 4816 286 MS 119-7 alignment trimmed tree collapsed 0.000 0.135
945 151 Transposase 1701 2332 2580 3418 4780 5370 4816 247 MS 145-7 alignment trimmed tree collapsed 0.012 0.170
946 151 Transposase 1700 2332 2580 3418 4780 5370 4816 262 TA271 alignment trimmed tree collapsed 0.210 6.996
947 151 Endoribonuclease L-PSP 1690 4619 1798 2305 3957 393 APEC O1 alignment trimmed tree collapsed 0.325 0.670
948 151 Aspartate carbamoyltransferase regulatory chain (PyrI) 1797 134 str. K-12 substr. DH10B alignment trimmed tree collapsed 0.000 0.175
949 151 Aspartate carbamoyltransferase (EC 2.1.3.2) 1796 133 EC4100B alignment trimmed tree collapsed 0.004 1.131
950 151 hypothetical protein 47 EC4100B alignment trimmed tree collapsed 0.144 1.910
951 151 UPF0076 protein YjgH 1690 1794 3957 235 MS 198-1 alignment trimmed tree collapsed 0.016 1.165
952 151 FIG00642410: hypothetical protein 12 MS 198-1 alignment trimmed tree collapsed 0.000 0.564
953 151 Uncharacterized oxidoreductase YjgI (EC 1.-.-.-) 972 2348 2422 2567 2654 2841 2969 3212 3653 3668 4026 4050 5287 82 412 1200 1313 1489 1793 1983 2609 2956 3537 4463 4594 4678 2014 042 alignment trimmed tree collapsed 2.849 0.481
954 151 Putative HTH-type transcriptional regulator YjgJ, TetR family 4437 456 1792 235 W alignment trimmed tree collapsed 0.030 1.089
955 151 Protein YjgK, linked to biofilm formation 1656 1804 888 1791 4634 396 SE11 alignment trimmed tree collapsed 0.189 0.679
956 151 Protein YjgL, putative CCAAT-box DNA binding protein subunit B 83 55989 alignment trimmed tree collapsed 0.261 0.189
957 151 hypothetical protein 98 B088 alignment trimmed tree collapsed 0.938 0.929
958 151 Ornithine carbamoyltransferase (EC 2.1.3.3) 2532 586 1187 293 042 alignment trimmed tree collapsed 0.007 1.151
959 151 Ribonuclease E inhibitor RraB 1188 126 APEC O1 alignment trimmed tree collapsed 0.000 0.347
960 151 Uncharacterized acetyltransferase YjgM (EC 2.3.1.-) 1189 130 55989 alignment trimmed tree collapsed 0.056 0.378
961 151 Inner membrane protein YjgN 1190 123 B185 alignment trimmed tree collapsed 1.075 0.550
962 151 Valyl-tRNA synthetase (EC 6.1.1.9) 129 MS 21-1 alignment trimmed tree collapsed 0.006 0.326
963 151 DNA polymerase III chi subunit (EC 2.7.7.7) 1192 134 SE11 alignment trimmed tree collapsed 0.000 0.393
964 151 Cytosol aminopeptidase PepA (EC 3.4.11.1) 1193 133 O157:H7 str. EC4076 alignment trimmed tree collapsed 0.000 0.262
965 151 hypothetical protein 1194 129 IAI1 alignment trimmed tree collapsed 0.000 0.179
966 151 FIG000988: Predicted permease 1195 128 O111:H- str. 11128 alignment trimmed tree collapsed 0.000 0.171
967 151 FIG000906: Predicted Permease 1196 134 EC4100B alignment trimmed tree collapsed 0.069 8.813
968 151 FIG000906: Predicted Permease 2320 1196 3684 222 O157:H7 str. EC4401 alignment trimmed tree collapsed 1.642 0.814
969 151 FIG00638157: hypothetical protein 1197 133 55989 alignment trimmed tree collapsed 0.028 1.049
970 151 Positive regulator of L-idonate catabolism 666 2021 3225 3669 3714 4084 499 1198 1436 1745 1860 3715 3940 722 HS alignment trimmed tree collapsed 2.626 1.021
971 151 L-idonate, D-gluconate, 5-keto-D-gluconate transporter 730 1993 2019 42 1199 1747 2685 3201 563 MS 84-1 alignment trimmed tree collapsed 0.583 0.724
972 151 5-keto-D-gluconate 5-reductase (EC 1.1.1.69) 953 2348 2422 2567 2654 2739 2841 3212 3653 3668 5287 82 412 1200 1313 1489 1793 2014 3537 4463 4594 4678 1793 FVEC1302 alignment trimmed tree collapsed 0.000 0.764
973 151 L-idonate 5-dehydrogenase (EC 1.1.1.264) 4223 1201 3795 287 W alignment trimmed tree collapsed 1.821 1.467
974 151 Gluconokinase (EC 2.7.1.12) 1202 59 55989 alignment trimmed tree collapsed 0.011 0.399
975 151 Alcohol dehydrogenase (EC 1.1.1.1) 3842 5480 213 1203 314 B7A alignment trimmed tree collapsed 2.183 0.505
976 152 reverse transcriptase-like protein 699 1196 1211 1226 2417 4205 97 IAI39 alignment trimmed tree collapsed 0.034 2.952
977 152 hypothetical protein 688 1197 1210 1225 3060 3497 4337 1274 3483 1565 IAI39 alignment trimmed tree collapsed 0.000 0.889
978 152 unknown in ISEc8 115 209 681 714 2516 3560 4167 4487 4544 4627 714 55989 alignment trimmed tree collapsed 0.448 1.621
979 152 ISSfl3 orfA 210 682 2517 3445 4488 453 S88 alignment trimmed tree collapsed 1.845 0.736
980 152 Transposase 3 042 alignment trimmed tree collapsed 0.224 1.414
981 152 Transposase 116 207 680 713 4166 558 B171 alignment trimmed tree collapsed 0.647 0.579
982 152 Transposase 16 O26:H11 str. 11368 alignment trimmed tree collapsed 0.036 0.988
983 152 Transposase 116 207 680 981 991 1220 2518 4166 4214 4602 4603 693 O157:H7 str. EC4196 alignment trimmed tree collapsed 0.617 0.606
984 153 hypothetical protein 1192 1216 1230 3058 1272 1007 O157:H7 alignment trimmed tree collapsed 0.048 0.412
985 153 putative transposase 696 1193 1215 1229 2402 67 55989 alignment trimmed tree collapsed 0.033 0.493
986 153 hypothetical protein 697 1194 1214 1228 2401 43 M718 alignment trimmed tree collapsed 0.000 0.397
987 153 FIG00644055: hypothetical protein 698 1195 1213 1227 2400 39 IAI39 alignment trimmed tree 0.000 0.000
988 154 hypothetical protein 54 55989 alignment trimmed tree collapsed 1.179 1.646
989 154 COG4771: Outer membrane receptor for ferrienterochelin and colicins 1199 5274 1810 3442 4490 336 E110019 alignment trimmed tree collapsed 2.490 0.549
990 154 hypothetical protein 4489 33 CFT073 alignment trimmed tree collapsed 0.015 0.825
991 154 Transposase 116 207 680 713 981 4166 4214 700 B7A alignment trimmed tree collapsed 0.970 0.625
992 155 Starvation sensing protein RspA 1579 3627 3577 3796 282 MS 107-1 alignment trimmed tree collapsed 0.094 0.635
993 155 D-galactonate transporter 771 1578 2248 2681 66 700 2338 3576 3823 530 MS 78-1 alignment trimmed tree collapsed 0.003 0.157
994 155 Hydrogen peroxide-inducible genes activator 2153 2736 2823 3368 5493 18 618 965 1781 2190 3575 3613 4342 1069 042 alignment trimmed tree collapsed 2.677 0.567
995 155 Soluble pyridine nucleotide transhydrogenase (EC 1.6.1.1) 142 5452 5676 369 3086 3574 3734 424 O157:H7 str. EC4024 alignment trimmed tree collapsed 2.023 0.275
996 155 Unsaturated fatty acid biosythesis repressor FabR, TetR family 3573 30 55989 alignment trimmed tree collapsed 0.029 2.080
997 155 Unsaturated fatty acid biosythesis repressor FabR, TetR family 3572 134 55989 alignment trimmed tree collapsed 0.036 6.034
998 155 Unsaturated fatty acid biosythesis repressor FabR, TetR family 3572 134 042 alignment trimmed tree collapsed 0.005 2.325
999 155 Putative inner membrane protein 3571 134 NC101 alignment trimmed tree collapsed 0.000 0.175
1000 155 tRNA (Uracil54-C5-)-methyltransferase (EC 2.1.1.35) 3570 130 B171 alignment trimmed tree collapsed 0.004 0.805
1001 155 Outer membrane vitamin B12 receptor BtuB 502 3569 299 ATCC 8739 alignment trimmed tree collapsed 0.042 0.851
1002 155 Glutamate racemase (EC 5.1.1.3) 3568 133 MS 78-1 alignment trimmed tree collapsed 0.000 0.593
1003 155 UDP-N-acetylenolpyruvoylglucosamine reductase (EC 1.1.1.158) 2311 131 EC4100B alignment trimmed tree collapsed 0.019 0.612
1004 155 Biotin-protein ligase (EC 6.3.4.15) / Biotin operon repressor 2312 130 ATCC 8739 alignment trimmed tree collapsed 0.007 0.963
1005 155 Pantothenate kinase (EC 2.7.1.33) 2313 125 UTI89 alignment trimmed tree collapsed 0.000 0.349
1006 155 hypothetical protein 2314 111 W alignment trimmed tree collapsed 0.016 0.319
1007 155 Translation elongation factor Tu 1672 1905 2825 298 MS 124-1 alignment trimmed tree collapsed 0.000 0.881
1008 155 Preprotein translocase subunit SecE (TC 3.A.5.1.1) 4405 123 MS 78-1 alignment trimmed tree collapsed 0.000 0.183
1009 155 Transcription antitermination protein NusG 4404 120 101-1 alignment trimmed tree collapsed 0.000 0.570
1010 155 LSU ribosomal protein L11p (L12e) 4403 122 O157:H7 str. Sakai alignment trimmed tree collapsed 0.000 0.207
1011 155 LSU ribosomal protein L1p (L10Ae) 4402 125 2362-75 alignment trimmed tree collapsed 0.000 0.260
1012 155 LSU ribosomal protein L10p (P0) 131 MS 182-1 alignment trimmed tree 0.000 0.000
1013 155 LSU ribosomal protein L7/L12 (P1/P2) 779 133 ED1a alignment trimmed tree collapsed 0.000 0.124
1014 155 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) 132 101-1 alignment trimmed tree collapsed 0.000 0.124
1015 155 DNA-directed RNA polymerase beta subunit (EC 2.7.7.6) 2814 134 101-1 alignment trimmed tree collapsed 0.000 0.219
1016 155 DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6) 2815 131 55989 alignment trimmed tree collapsed 0.000 0.505
1017 155 Heat shock protein C 52 53638 alignment trimmed tree collapsed 0.000 0.438
1018 155 Thiazole biosynthesis protein ThiH 3468 134 EC4100B alignment trimmed tree collapsed 0.003 0.920
1019 155 Thiazole biosynthesis protein ThiG 3467 132 APEC O1 alignment trimmed tree collapsed 0.000 1.011
1020 155 Sulfur carrier protein ThiS 3466 133 IAI1 alignment trimmed tree collapsed 0.077 0.904
1021 155 Sulfur carrier protein adenylyltransferase ThiF 4669 3465 3781 267 MS 182-1 alignment trimmed tree collapsed 1.033 0.964
1022 155 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) 3464 131 E24377A alignment trimmed tree collapsed 0.000 0.541
1023 155 Thiamin biosynthesis protein ThiC 3463 131 O111:H- str. 11128 alignment trimmed tree collapsed 0.002 0.937
1024 155 Regulator of sigma D 3462 130 042 alignment trimmed tree collapsed 0.007 0.477
1025 155 NADH pyrophosphatase (EC 3.6.1.22) 3461 134 53638 alignment trimmed tree collapsed 0.004 0.895
1026 155 Uroporphyrinogen III decarboxylase (EC 4.1.1.37) 3460 132 MS 124-1 alignment trimmed tree collapsed 0.006 0.811
1027 155 Endonuclease V (EC 3.1.21.7) 3459 133 str. K-12 substr. DH10B alignment trimmed tree collapsed 0.000 0.427
1028 155 Uncharacterized protein YjaG 3458 129 DH1 alignment trimmed tree collapsed 0.000 0.909
1029 155 DNA-binding protein HU-alpha 3774 4763 5131 843 1391 1615 3457 529 str. K-12 substr. MG1655 alignment trimmed tree collapsed 1.671 0.602
1030 155 Uncharacterized protein YjaH 3456 129 APEC O1 alignment trimmed tree collapsed 0.005 0.719
1031 155 Zinc resistance-associated protein 3455 83 E2348/69 alignment trimmed tree collapsed 0.000 0.134
1032 155 hypothetical protein 3454 111 MS 21-1 alignment trimmed tree collapsed 0.160 3.046
1033 155 Sensor protein of zinc sigma-54-dependent two-component system 3453 132 55989 alignment trimmed tree collapsed 0.009 0.323
1034 155 Response regulator of zinc sigma-54-dependent two-component system 1278 2984 659 2622 3452 477 55989 alignment trimmed tree collapsed 0.990 0.646
1035 155 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 3451 134 55989 alignment trimmed tree collapsed 0.015 0.445
1036 155 IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) 3450 2 alignment trimmed
1037 155 hypothetical protein 3449 104 str. K-12 substr. DH10B alignment trimmed tree collapsed 0.025 0.667
1038 155 Putative acetyltransferase 1625 728 1850 285 MS 107-1 alignment trimmed tree collapsed 0.028 0.345
1039 155 Homoserine O-succinyltransferase (EC 2.3.1.46) 727 134 HS alignment trimmed tree collapsed 0.013 0.057
1040 155 Malate synthase (EC 2.3.3.9) 726 133 55989 alignment trimmed tree collapsed 0.020 0.697
1041 155 Malate synthase (EC 2.3.3.9) 726 136 B str. REL606 alignment trimmed tree collapsed 0.016 0.282
1042 155 Isocitrate lyase (EC 4.1.3.1) 725 134 MS 182-1 alignment trimmed tree collapsed 0.000 0.627
1043 155 Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-) 724 131 W alignment trimmed tree collapsed 0.011 1.238
1044 155 Ankyrin-repeat protein A 723 99 B7A alignment trimmed tree collapsed 0.029 0.829
1045 155 Ankyrin-repeat protein A 48 E22 alignment trimmed tree collapsed 0.012 0.287
1046 155 Acetate operon repressor 2951 278 str. K-12 substr. MG1655 alignment trimmed tree collapsed 0.000 0.978
1047 155 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) 2950 133 str. K-12 substr. MG1655 alignment trimmed tree collapsed 0.005 0.628
1048 155 Sodium-dependent phosphate transporter 2949 123 APEC O1 alignment trimmed tree collapsed 0.006 0.870
1049 155 Alpha-aspartyl dipeptidase Peptidase E (EC 3.4.13.21) 2948 133 042 alignment trimmed tree collapsed 0.000 0.432
1050 155 Ribosomal large subunit pseudouridine synthase F (EC 4.2.1.70) ## LSU Psi2604 4024 1985 2947 258 1212A alignment trimmed tree collapsed 1.278 1.032
1051 155 hypothetical protein 2946 134 ATCC 8739 alignment trimmed tree collapsed 0.011 0.423
1052 155 COG0330: Membrane protease subunits, stomatin/prohibitin homologs 2945 35 MS 107-1 alignment trimmed tree collapsed 0.006 0.128
1053 155 COG3541: Predicted nucleotidyltransferase 2944 39 55989 alignment trimmed tree collapsed 0.038 1.259
1054 155 COG0148: Enolase 2943 35 B171 alignment trimmed tree collapsed 0.010 0.503
1055 155 Aspartokinase (EC 2.7.2.4) 5559 2040 2942 208 EC4100B alignment trimmed tree collapsed 1.335 0.754
1056 155 Glucose-6-phosphate isomerase (EC 5.3.1.9) 2941 127 H736 alignment trimmed tree collapsed 0.004 0.816
1057 155 YjbE secreted protein 1 042
1058 155 YjbF outer membrane lipoprotein 4593 1414 2939 221 E24377A alignment trimmed tree collapsed 1.180 0.935
1059 155 YjbG polysaccharide synthesis-related protein 4592 1415 2938 187 O111:H- str. 11128 alignment trimmed tree collapsed 0.045 0.135
1060 155 YjbH outer membrane lipoprotein 1
1061 155 YjbH outer membrane lipoprotein 4591 1416 2937 230 HS alignment trimmed tree collapsed 0.006 0.895
1062 155 hypothetical protein 2936 127 MS 182-1 alignment trimmed tree collapsed 0.117 0.765
1063 155 hypothetical protein 2935 70 E22 alignment trimmed tree collapsed 0.027 0.174
1064 155 PsiE protein 2934 135 MS 198-1 alignment trimmed tree collapsed 0.000 0.596
1065 155 D-xylose proton-symporter XylE 2738 967 2933 4264 348 MS 119-7 alignment trimmed tree collapsed 1.666 1.703
1066 155 Maltose/maltodextrin ABC transporter, permease protein MalG 2033 4075 1444 1904 2932 396 APEC O1 alignment trimmed tree collapsed 2.429 0.290
1067 155 Maltose/maltodextrin ABC transporter, permease protein MalF 2931 132 55989 alignment trimmed tree collapsed 0.006 0.168
1068 155 Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE 2930 144 H736 alignment trimmed tree collapsed 0.011 0.305
1069 155 Maltose/maltodextrin transport ATP-binding protein MalK (EC 3.6.3.19) 1150 1461 1613 1645 1787 1857 2032 2048 2457 2837 2976 3086 3203 3448 3823 3993 4082 4183 4265 4444 4453 4701 4710 4726 4790 4902 4919 5003 5194 5279 5380 5476 4 92 210 283 310 450 623 872 917 1438 1678 1710 1802 1815 1834 1869 1890 1905 2517 2530 2615 2709 2889 2929 3003 3242 3358 3838 3847 4472 4573 4758 4843 4472 O127:H6 str. E2348/69 alignment trimmed tree collapsed 1.210 1.279
1070 155 Maltose/maltodextrin transport ATP-binding protein MalK (EC 3.6.3.19) 2032 4082 1438 1905 2929 393 O127:H6 str. E2348/69 alignment trimmed tree collapsed 0.004 0.302
1071 155 Maltoporin (maltose/maltodextrin high-affinity receptor, phage lambda receptor protein) 2928 133 H591 alignment trimmed tree collapsed 0.000 0.306
1072 155 Maltoporin (maltose/maltodextrin high-affinity receptor, phage lambda receptor protein) 2928 136 55989 alignment trimmed tree collapsed 0.007 0.171
1073 155 Maltose operon periplasmic protein MalM 2927 133 B7A alignment trimmed tree collapsed 0.007 0.848
1074 155 hypothetical protein 2926 51 DH1 alignment trimmed tree collapsed 0.000 0.205
1075 155 YjbI protein 2925 98 B171 alignment trimmed tree collapsed 0.000 0.837
1076 155 YjbI protein 119 55989 alignment trimmed tree collapsed 0.048 0.565
1077 155 Chorismate--pyruvate lyase (EC 4.1.3.40) 2923 133 ATCC 8739 alignment trimmed tree collapsed 0.026 0.186
1078 155 4-hydroxybenzoate polyprenyltransferase (EC 2.5.1.-) 2922 133 MS 119-7 alignment trimmed tree collapsed 0.004 1.106
1079 155 Glycerol-3-phosphate acyltransferase (EC 2.3.1.15) 2921 131 O83:H1 str. NRG 857C alignment trimmed tree collapsed 0.003 0.622
1080 155 Glycerol-3-phosphate acyltransferase (EC 2.3.1.15) 2921 131 O83:H1 str. NRG 857C alignment trimmed tree collapsed 0.016 11.389
1081 155 Diacylglycerol kinase (EC 2.7.1.107) 2920 166 B171 alignment trimmed tree collapsed 0.000 0.507
1082 155 SOS-response repressor and protease LexA (EC 3.4.21.88) 2919 134 55989 alignment trimmed tree collapsed 0.000 0.178
1083 155 DNA-damage-inducible protein F 2918 130 55989 alignment trimmed tree collapsed 0.013 0.500
1084 155 UPF0337 protein yjbJ 2917 134 ATCC 8739 alignment trimmed tree collapsed 0.000 0.590
1085 155 Zinc uptake regulation protein ZUR 2916 133 E2348/69 alignment trimmed tree collapsed 0.024 0.796
1086 155 hypothetical protein 2915 100 ETEC H10407 alignment trimmed tree collapsed 0.195 0.336
1087 155 FIG00639441: hypothetical protein 2915 98 B7A alignment trimmed tree collapsed 0.107 0.293
1088 155 FIG00639441: hypothetical protein 2915 99 55989 alignment trimmed tree collapsed 0.122 0.227
1089 155 tRNA dihydrouridine synthase A (EC 1.-.-.-) 2914 128 E22 alignment trimmed tree collapsed 0.019 0.744
1090 155 hypothetical protein 2913 131 53638 alignment trimmed tree collapsed 0.029 0.625
1091 155 Quinone oxidoreductase (EC 1.6.5.5) 132 55989 alignment trimmed tree collapsed 0.004 0.122
1092 155 Replicative DNA helicase (EC 3.6.1.-) 3317 130 E22 alignment trimmed tree collapsed 0.000 0.637
1093 155 Alanine racemase, biosynthetic (EC 5.1.1.1) 4504 139 3318 264 UM146 alignment trimmed tree collapsed 0.000 1.157
1094 155 hypothetical protein 3319 52 MS 182-1 alignment trimmed tree collapsed 0.069 0.607
1095 155 Biosynthetic Aromatic amino acid aminotransferase alpha (EC 2.6.1.57) 4781 1838 3320 261 55989 alignment trimmed tree collapsed 1.099 0.978
1096 155 hypothetical protein 42 E110019 alignment trimmed tree collapsed 0.038 0.423
1097 155 NMN phosphatase (EC 3.1.3.5); Class B acid phosphatase precursor (EC 3.1.3.2) 2099 101 EC4100B alignment trimmed tree collapsed 0.013 0.139
1098 155 FIG004064: hypothetical protein 2100 134 55989 alignment trimmed tree collapsed 0.015 2.458
1099 155 Protein yjbR 2101 133 2362-75 alignment trimmed tree collapsed 0.009 0.471
1100 155 Excinuclease ABC subunit A 2102 128 SMS-3-5 alignment trimmed tree collapsed 0.003 1.348
1101 155 Single-stranded DNA-binding protein 529 1212 2103 239 APEC O1 alignment trimmed tree collapsed 0.809 0.499
1102 155 YjcB protein 2104 130 B088 alignment trimmed tree collapsed 0.000 0.524
1103 155 hypothetical protein 5150 1408 2105 268 55989 alignment trimmed tree collapsed 0.004 0.193
1104 155 Regulatory protein SoxS 815 1164 1322 1323 1377 1647 2353 2799 3514 3755 3799 4122 4285 5453 5621 1164 1165 1222 1567 2032 2106 2234 2473 2870 3261 3293 3645 3733 3737 3966 4295 4432 2147 MS 187-1 alignment trimmed tree collapsed 2.409 0.993
1105 155 Redox-sensitive transcriptional activator SoxR 2107 131 B171 alignment trimmed tree collapsed 0.014 0.659
1106 155 hypothetical protein 2108 118 MS 200-1 alignment trimmed tree collapsed 0.010 1.294
1107 155 Guanine-hypoxanthine permease 1547 1600 2546 342 1510 2109 465 55989 alignment trimmed tree collapsed 1.199 1.596
1108 155 hypothetical protein 2110 79 KO11 alignment trimmed tree collapsed 0.000 0.288
1109 155 Putative Na(+)/H(+) exchanger protein, CPA1 family precursor 2111 143 MS 84-1 alignment trimmed tree collapsed 0.000 0.509
1110 155 FIG00638091: hypothetical protein 78 E24377A alignment trimmed tree collapsed 0.085 0.486
1111 155 Acetate permease ActP (cation/acetate symporter) 2300 134 O157:H7 str. Sakai alignment trimmed tree collapsed 0.014 0.362
1112 155 Acetate permease ActP (cation/acetate symporter) 2300 134 53638 alignment trimmed tree collapsed 0.017 3.235
1113 155 Acetate permease ActP (cation/acetate symporter) 2300 129 BL21(DE3) alignment trimmed tree collapsed 0.003 3.769
1114 155 Putative membrane protein, clustering with ActP 2299 129 MS 175-1 alignment trimmed tree collapsed 0.000 0.100
1115 155 Acetyl-coenzyme A synthetase (EC 6.2.1.1) 2298 130 E22 alignment trimmed tree collapsed 0.000 0.983
1116 155 Cytochrome c552 precursor (EC 1.7.2.2) 2297 126 str. K-12 substr. DH10B alignment trimmed tree collapsed 0.003 0.943
1117 155 Cytochrome c-type protein NrfB precursor 2296 132 MS 187-1 alignment trimmed tree collapsed 0.000 0.612
1118 155 NrfC protein 2295 152 O157:H7 str. TW14588 alignment trimmed tree collapsed 0.000 0.421
1119 155 NrfD protein 2294 133 55989 alignment trimmed tree collapsed 0.007 0.530
1120 155 Cytochrome c-type heme lyase subunit nrfE, nitrite reductase complex assembly 2293 130 IAI1 alignment trimmed tree collapsed 0.009 0.893
1121 155 Cytochrome c-type heme lyase subunit nrfF, nitrite reductase complex assembly 3277 541 2292 263 WV_060327 alignment trimmed tree collapsed 1.106 0.790
1122 155 Cytochrome c-type heme lyase subunit nrfG, nitrite reductase complex assembly 2291 134 B7A alignment trimmed tree collapsed 0.016 0.357
1123 155 hypothetical protein 2290 129 O157:H7 str. EC4042 alignment trimmed tree collapsed 0.000 0.606
1124 155 Proton/glutamate symport protein @ Proton/aspartate symport protein 3792 859 2289 293 BL21 alignment trimmed tree collapsed 1.018 0.661
1125 155 Putative exported protein 2288 132 E2348/69 alignment trimmed tree collapsed 0.000 0.127
1126 155 Formate dehydrogenase H (EC 1.2.1.2) @ selenocysteine-containing 0
1127 155 Formate dehydrogenase H (EC 1.2.1.2) @ selenocysteine-containing 1126 3289 4217 4218 123 553 729 730 2287 631 MS 69-1 trimmed
1128 155 hypothetical protein 2286 109 E24377A alignment trimmed tree collapsed 0.026 0.537
1129 155 Outer membrane component of tripartite multidrug resistance system 3213 2285 4462 226 MS 107-1 alignment trimmed tree collapsed 1.334 0.888
1130 155 Membrane fusion component of tripartite multidrug resistance system 2284 127 IAI1 alignment trimmed tree collapsed 0.009 0.510
1131 155 Inner membrane component of tripartite multidrug resistance system 1825 3696 2283 2364 4642 493 IAI1 alignment trimmed tree collapsed 1.827 0.610
1132 155 hypothetical protein 2282 118 B088 alignment trimmed tree collapsed 0.023 0.891
1133 155 FIG00641624: hypothetical protein 21 MS 78-1 alignment trimmed tree collapsed 0.000 0.404
1134 155 hypothetical protein 2281 126 SE11 alignment trimmed tree collapsed 0.002 0.109
1135 155 Ribose 5-phosphate isomerase B (EC 5.3.1.6) 2280 28 MS 119-7 alignment trimmed tree collapsed 0.000 0.577
1136 155 FIG00638129: hypothetical protein 2279 130 APEC O1 alignment trimmed tree collapsed 0.000 0.846
1137 155 Metal-dependent hydrolases of the beta-lactamase superfamily I; PhnP protein 2278 130 B str. REL606 alignment trimmed tree collapsed 0.058 0.183
1138 155 PhnO protein 2277 133 1827-70 alignment trimmed tree collapsed 0.000 0.892
1139 155 ATP-binding protein PhnN; Guanylate kinase (EC 2.7.4.8) 1528 2276 2568 261 O26:H11 str. 11368 alignment trimmed tree collapsed 0.050 1.225
1140 155 Metal-dependent hydrolase involved in phosphonate metabolism 2275 132 B088 alignment trimmed tree collapsed 0.024 0.800
1141 155 Phosphonates transport ATP-binding protein PhnL 1150 1461 1645 1857 2048 2837 3086 3203 3263 3387 3448 4230 4444 4566 4567 4672 4701 4726 4919 5003 5194 5476 5555 5718 4 92 210 283 450 530 623 1834 1890 2082 2274 2517 2530 2698 2929 3106 3242 3383 3384 3778 3838 4472 4573 4758 4790 0 O26:H11 str. 11368
1142 155 Phosphonates transport ATP-binding protein PhnK 1857 2038 2183 2184 2837 3086 3203 3263 3387 3448 4052 4053 4183 4231 4566 4567 4701 4919 5003 5555 4 283 530 623 1834 1899 2273 2517 2697 2929 3106 3285 3286 3358 3383 3384 3654 3655 3838 4472 4758 4790 4843 0 55989 trimmed
1143 155 PhnJ protein 2272 136 B171 alignment trimmed tree collapsed 0.004 0.700
1144 155 PhnI protein 133 55989 alignment trimmed tree collapsed 0.009 0.181
1145 155 PhnH protein 2271 134 E110019 alignment trimmed tree collapsed 0.016 1.253
1146 155 PhnG protein 2270 135 55989 alignment trimmed tree collapsed 0.019 1.287
1147 155 Transcriptional regulator PhnF 1943 4293 692 1254 2269 2862 348 042 alignment trimmed tree collapsed 2.588 1.045
1148 155 Phosphonate ABC transporter permease protein phnE (TC 3.A.1.9.1) 2268 119 M605 alignment trimmed tree collapsed 0.005 0.910
1149 155 Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) 133 DH1 alignment trimmed tree collapsed 0.000 0.930
1150 155 Phosphonate ABC transporter ATP-binding protein (TC 3.A.1.9.1) 1787 2038 4082 4183 4453 5003 5555 92 283 872 1438 1710 1899 4790 4843 1153 B7A alignment trimmed tree collapsed 1.980 0.733
1151 155 PhnB protein; putative DNA binding 3-demethylubiquinone-9 3-methyltransferase domain protein 91 131 MS 145-7 alignment trimmed tree collapsed 0.014 0.343
1152 155 Alkylphosphonate utilization operon protein PhnA 110 NC101 alignment trimmed tree collapsed 0.008 0.411
1153 155 Putative vimentin 196 55989 alignment trimmed tree collapsed 0.009 0.779
1154 155 Methyl-accepting chemotaxis protein 709 3751 238 MS 124-1 alignment trimmed tree collapsed 0.018 0.975
1155 155 L-Proline/Glycine betaine transporter ProP 3750 132 APEC O1 alignment trimmed tree collapsed 0.010 0.932
1156 155 Sensor protein basS/pmrB (EC 2.7.3.-) 1979 1456 3749 268 O157:H7 EDL933 alignment trimmed tree collapsed 1.814 2.865
1157 155 Sensor protein basS/pmrB (EC 2.7.3.-) 2368 2249 3749 266 M605 alignment trimmed tree collapsed 0.025 0.424
1158 155 Sensor protein basS/pmrB (EC 2.7.3.-) 3749 134 MS 115-1 alignment trimmed tree collapsed 0.000 0.033
1159 155 Transcriptional regulatory protein basR/pmrA 817 820 1980 2084 2102 3161 3503 3655 4458 5040 5082 5259 265 467 1455 1706 1775 2034 2037 2248 2332 2397 3308 3432 3539 3583 3748 1791 H591 alignment trimmed tree collapsed 2.346 0.094
1160 155 Phosphoethanolamine transferase EptA specific for the 1 phosphate group of core-lipid A 1378 4296 285 E24377A alignment trimmed tree collapsed 0.005 0.594
1161 155 Arginine/agmatine antiporter 1416 5037 785 1094 1944 2005 504 O157:H7 str. EC869 alignment trimmed tree collapsed 1.268 1.105
1162 155 Transcriptional regulator of catabolic arginine decarboxylase (adiA) 5244 241 784 235 TA271 alignment trimmed tree collapsed 0.000 0.345
1163 155 Arginine decarboxylase, catabolic (EC 4.1.1.19) 783 141 B7A alignment trimmed tree collapsed 1.155 0.265
1164 155 Melibiose operon regulatory protein 3966 134 MS 146-1 alignment trimmed tree collapsed 0.004 0.720
1165 155 Alpha-galactosidase (EC 3.2.1.22) 3798 1221 3967 320 TA271 alignment trimmed tree collapsed 2.223 0.162
1166 155 Melibiose carrier protein, Na+/melibiose symporter 1538 3665 3547 3968 4660 397 55989 alignment trimmed tree collapsed 2.154 0.445
1167 155 Inner membrane protein yjdF 3969 130 HS alignment trimmed tree collapsed 0.011 0.681
1168 155 Fumarate hydratase class I, anaerobic (EC 4.2.1.2) 3543 3970 303 MS 145-7 alignment trimmed tree collapsed 0.004 0.409
1169 155 C4-dicarboxylate transporter DcuB 2015 3971 171 CFT073 alignment trimmed tree collapsed 0.000 0.583
1170 155 Fumarate respiration transcriptional regulator DcuR 5314 3972 4700 266 TA143 alignment trimmed tree collapsed 0.000 0.591
1171 155 Fumarate respiration sensor kinase protein DcuS 5313 3826 3973 384 55989 alignment trimmed tree collapsed 2.216 0.805
1172 155 hypothetical protein 3974 67 MS 78-1 alignment trimmed tree collapsed 0.000 0.529
1173 155 hypothetical protein 3975 132 E24377A alignment trimmed tree collapsed 0.028 0.314
1174 155 hypothetical protein YjdJ 3976 135 O157:H7 str. FRIK2000 alignment trimmed tree collapsed 0.000 0.536
1175 155 hypothetical protein 3977 126 B str. REL606 alignment trimmed tree collapsed 0.000 0.506
1176 155 Putative inner membrane protein 4188 1830 3978 258 B088 alignment trimmed tree collapsed 0.000 0.673
1177 155 Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) 2553 3958 4784 1504 1840 3979 4268 529 MS 119-7 alignment trimmed tree collapsed 2.339 1.016
1178 155 Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) 2553 3979 262 MS 119-7 alignment trimmed tree collapsed 0.001 0.179
1179 155 Di/tripeptide permease YjdL 2121 3685 5056 2124 4125 4163 4693 502 55989 alignment trimmed tree collapsed 0.009 0.240
1180 155 Lysine decarboxylase, inducible (EC 4.1.1.18) 1163 5754 182 783 441 MS 107-1 alignment trimmed tree collapsed 1.671 0.712
1181 155 Lysine/cadaverine antiporter membrane protein CadB 1161 785 1944 250 DH1 alignment trimmed tree collapsed 0.000 0.909
1182 155 Lysine/cadaverine antiporter membrane protein CadB 907 1161 1416 1939 3232 3652 4197 5037 5264 5672 365 503 785 1094 1250 1822 1944 1965 2005 2327 3536 1379 TA143 alignment trimmed tree collapsed 0.000 0.945
1183 155 Transcriptional activator of cad operon 117 55989 alignment trimmed tree collapsed 0.014 0.605
1184 155 Z1226 protein 299 313 382 2293 1070 170 55989 alignment trimmed tree collapsed 0.188 0.496
1185 155 Z1225 protein 212 2292 219 O111:H- str. 11128 alignment trimmed tree collapsed 0.455 0.178
1186 155 Z5092 protein 211 4880 4937 178 55989 alignment trimmed tree collapsed 0.303 1.225
1187 155 YeeV toxin protein 2291 3578 251 MS 21-1 alignment trimmed tree collapsed 0.116 0.242
1188 155 putative structural protein 215 295 2290 3577 345 S88 alignment trimmed tree collapsed 0.096 0.202
1189 155 YeeT 23 2289 3576 284 E24377A alignment trimmed tree collapsed 0.101 0.138
1190 155 putative RADC family DNA repair protein, 22 3575 259 55989 alignment trimmed tree collapsed 0.065 0.242
1191 155 Antirestriction protein klcA 2 042 alignment trimmed
1192 155 hypothetical protein 984 1216 1230 3058 1272 1007 O157:H7 alignment trimmed tree collapsed 1.564 0.412
1193 155 putative transposase 696 985 1215 1229 2402 67 55989 alignment trimmed tree collapsed 0.027 0.503
1194 155 hypothetical protein 697 986 1214 1228 2401 43 SE15 alignment trimmed tree collapsed 0.028 1.535
1195 155 FIG00644055: hypothetical protein 698 987 1213 1227 2400 39 IAI39 alignment trimmed tree 0.000 0.000
1196 155 Retron-type reverse transcriptase 699 1226 90 55989 alignment trimmed tree collapsed 0.004 0.156
1197 155 hypothetical protein 688 977 1210 1225 3060 3497 4337 1274 3483 1565 IAI39 alignment trimmed tree collapsed 1.578 0.889
1198 155 hypothetical protein 1
1199 155 Aerobactin siderophore receptor IutA @ TonB-dependent siderophore receptor 3523 3442 4207 107 55989 alignment trimmed tree collapsed 0.111 0.165
1200 155 L-lysine 6-monooxygenase [NADPH] (EC 1.14.13.59), aerobactin biosynthesis protein IucD @ Siderophore biosynthesis protein, monooxygenase 36 55989 alignment trimmed tree collapsed 0.025 0.571
1201 155 Citrate:6-N-acetyl-6-N-hydroxy-L-lysine ligase, alpha subunit (EC 6.3.2.27), aerobactin biosynthesis protein IucA @ Siderophore synthetase superfamily, group C @ Siderophore synthetase component, ligase 3443 37 55989 alignment trimmed tree collapsed 0.033 0.173
1202 155 N6-hydroxylysine O-acetyltransferase (EC 2.3.1.102), aerobactin biosynthesis protein IucB @ Siderophore synthetase small component, acetyltransferase 3444 37 55989 alignment trimmed tree collapsed 0.045 0.762
1203 155 Citrate:6-N-acetyl-6-N-hydroxy-L-lysine ligase, alpha subunit (EC 6.3.2.27), aerobactin biosynthesis protein IucA @ Siderophore synthetase superfamily, group A @ Siderophore synthetase large component, acetyltransferase 35 55989 alignment trimmed tree collapsed 0.002 0.560
1204 155 putative membrane transport protein 1
1205 155 FIG01068346: hypothetical protein 1
1206 155 Acetyltransferase (EC 2.3.1.-) 12 H299 alignment trimmed tree collapsed 0.119 1.037
1207 155 COG3436: Transposase and inactivated derivatives 116 117 207 680 713 981 983 991 1220 2518 3542 3558 2168 4166 4214 4602 4603 945 B7A alignment trimmed tree collapsed 0.460 0.112
1208 155 Transposase 25 E24377A alignment trimmed tree collapsed 0.581 4.898
1209 155 hypothetical protein 41 55989 alignment trimmed tree collapsed 0.000 0.603
1210 155 Putative Transposase for IS629 688 977 1197 1225 3060 3497 4337 1274 3483 1565 IAI39 alignment trimmed tree collapsed 0.000 0.889
1211 155 reverse transcriptase-like protein 699 1196 1226 4205 93 55989 alignment trimmed tree collapsed 0.003 0.390
1212 155 Group II intron-encoded reverse transcriptase/maturase 1
1213 155 FIG00644055: hypothetical protein 698 987 1195 1227 2400 39 IAI39 alignment trimmed tree 0.000 0.000
1214 155 hypothetical protein 697 986 1194 1228 2401 43 SE15 alignment trimmed tree collapsed 0.028 1.535
1215 155 putative transposase 696 985 1193 1229 2402 67 55989 alignment trimmed tree collapsed 0.033 0.493
1216 155 hypothetical protein 984 1192 1230 3058 1272 1007 O157:H7 alignment trimmed tree collapsed 0.048 0.412
1217 155 Transposase 2515 50 55989 alignment trimmed tree collapsed 0.015 0.891
1218 155 COG4584: Transposase and inactivated derivatives 162 2362-75 alignment trimmed tree collapsed 1.675 0.582
1219 155 FIG00644940: hypothetical protein 4 55989 alignment trimmed tree collapsed 0.051 0.577
1220 155 Transposase 116 207 680 713 981 991 4166 4214 716 O157:H7 str. EC4196 alignment trimmed tree collapsed 1.926 0.596
1221 155 hypothetical protein 2519 2552 111 EC4100B alignment trimmed tree collapsed 0.083 0.302
1222 155 Per-activated serine protease autotransporter enterotoxin EspC 124 2520 4517 192 1682 2551 183 042 alignment trimmed tree collapsed 0.736 0.754
1223 155 Per-activated serine protease autotransporter enterotoxin EspC 2520 2551 65 042 alignment trimmed tree collapsed 0.007 0.571
1224 155 Per-activated serine protease autotransporter enterotoxin EspC 1
1225 155 IS629 ORF2 688 824 977 1197 1210 3060 3497 4337 1274 3483 1567 MS 119-7 alignment trimmed tree collapsed 1.564 0.767
1226 155 Retron-type reverse transcriptase 699 1196 90 55989 alignment trimmed tree collapsed 0.007 1.546
1227 155 FIG00644055: hypothetical protein 698 987 1195 1213 2400 39 IAI39 alignment trimmed tree 0.000 0.000
1228 155 hypothetical protein 697 986 1194 1214 2401 43 SE15 alignment trimmed tree collapsed 0.028 1.535
1229 155 IS629 ORF2 696 985 1193 1215 2402 67 55989 alignment trimmed tree collapsed 0.033 0.493
1230 155 transposase ORF A, IS629 984 1192 1216 3058 1272 1007 O157:H7 alignment trimmed tree collapsed 0.048 0.412
1231 156 Protein rarD 816 134 B088 alignment trimmed tree collapsed 0.024 1.034
1232 156 Protein rarD 816 128 KO11 alignment trimmed tree collapsed 0.000 0.280
1233 156 putative protein PaaI, possibly involved in aromatic compounds catabolism 815 134 53638 alignment trimmed tree collapsed 0.000 0.303
1234 156 Phospholipase A1 precursor (EC 3.1.1.32, EC 3.1.1.4); Outer membrane phospholipase A 814 134 O111:H- str. 11128 alignment trimmed tree collapsed 0.000 0.732
1235 156 ATP-dependent DNA helicase RecQ 813 129 MS 146-1 alignment trimmed tree collapsed 0.002 0.813
1236 156 L-lysine permease 1237 3874 5482 215 811 812 1339 509 O157:H7 str. EC4196 alignment trimmed tree collapsed 2.693 0.342
1237 156 Homoserine/homoserine lactone efflux protein 3874 811 1339 258 O157:H7 str. EC4076 alignment trimmed tree collapsed 1.531 0.640
1238 156 Lysophospholipase L2 (EC 3.1.1.5) 810 134 536 alignment trimmed tree collapsed 0.000 0.858
1239 156 Cof protein, HD superfamily hydrolase 1584 4976 5138 809 1397 1924 2192 523 EC4100B alignment trimmed tree collapsed 1.412 1.115
1240 156 hypothetical protein 808 91 W alignment trimmed tree collapsed 0.000 0.607
1241 156 hypothetical protein 807 45 IHE3034 alignment trimmed tree collapsed 0.000 0.151
1242 156 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) 806 129 55989 alignment trimmed tree collapsed 0.008 1.852
1243 156 Putative carboxymethylenebutenolidase (EC 3.1.1.45) 2345 604 805 245 55989 alignment trimmed tree collapsed 1.632 0.939
1244 156 Uridine phosphorylase (EC 2.4.2.3) 801 804 1948 267 W alignment trimmed tree collapsed 1.498 0.125
1245 156 DNA recombination protein RmuC 803 132 DH1 alignment trimmed tree collapsed 0.001 0.671
1246 156 Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) 802 130 B354 alignment trimmed tree collapsed 0.000 0.586
1247 156 Protein YigP (COG3165) clustered with ubiquinone biosynthetic genes 801 132 BL21(DE3) alignment trimmed tree collapsed 0.000 0.858
1248 156 Ubiquinone biosynthesis monooxygenase UbiB 800 129 MS 145-7 alignment trimmed tree collapsed 0.000 0.659
1249 156 Twin-arginine translocation protein TatA 799 134 ATCC 8739 alignment trimmed tree collapsed 0.011 0.272
1250 156 Twin-arginine translocation protein TatB 798 132 O157:H7 str. EC4486 alignment trimmed tree collapsed 0.006 0.536
1251 156 Twin-arginine translocation protein TatC 797 133 O157:H7 str. FRIK966 alignment trimmed tree collapsed 0.000 0.582
1252 156 Deoxyribonuclease TatD 794 796 1306 382 O103:H2 str. 12009 alignment trimmed tree collapsed 2.175 1.068
1253 156 Transcriptional activator RfaH 795 131 O157:H7 EDL933 alignment trimmed tree collapsed 0.000 0.150
1254 156 3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-) 2613 794 3199 205 ATCC 8739 alignment trimmed tree collapsed 0.000 0.743
1255 156 NAD(P)H-flavin reductase (EC 1.5.1.29) (EC 1.16.1.3) 793 128 O157:H7 str. EC508 alignment trimmed tree collapsed 0.000 0.441
1256 156 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) 2742 3430 4137 792 2012 3495 3631 527 55989 alignment trimmed tree collapsed 1.037 0.427
1257 156 Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) 791 157 MS 175-1 alignment trimmed tree collapsed 0.011 0.442
1258 156 Xaa-Pro dipeptidase PepQ (EC 3.4.13.9) 790 131 MS 187-1 alignment trimmed tree collapsed 0.003 0.903
1259 156 FIG000605: protein co-occurring with transport systems (COG1739) 789 130 SMS-3-5 alignment trimmed tree collapsed 0.006 0.408
1260 156 Potassium uptake protein TrkH 788 159 O103:H2 str. 12009 alignment trimmed tree collapsed 1.119 0.454
1261 156 Protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-) 787 129 MS 119-7 alignment trimmed tree collapsed 0.011 1.478
1262 156 Molybdopterin-guanine dinucleotide biosynthesis protein MobB 4103 133 MS 119-7 alignment trimmed tree collapsed 0.006 0.248
1263 156 Molybdopterin-guanine dinucleotide biosynthesis protein MobA 2539 579 4104 185 H591 alignment trimmed tree collapsed 0.022 0.663
1264 156 Protein yihD 4105 133 CFT073 alignment trimmed tree collapsed 0.000 0.217
1265 156 YihE protein, a ser/thr kinase implicated in LPS synthesis and Cpx signalling 4106 132 B7A alignment trimmed tree collapsed 0.003 0.476
1266 156 Periplasmic thiol:disulfide interchange protein DsbA 4107 139 E22 alignment trimmed tree collapsed 0.000 0.251
1267 156 FIG00639627: hypothetical protein 36 MS 124-1 alignment trimmed tree collapsed 0.024 0.176
1268 156 Putative GTP-binding protein 3663 2157 3545 261 55989 alignment trimmed tree collapsed 1.410 0.912
1269 156 Probable acyltransferase yihG (EC 2.3.-.-) 2158 111 B7A alignment trimmed tree collapsed 0.005 1.001
1270 156 hypothetical protein 126 E2348/69 alignment trimmed tree collapsed 0.111 0.167
1271 156 DNA polymerase I (EC 2.7.7.7) 652 117 ATCC 8739 alignment trimmed tree collapsed 0.002 0.026
1272 156 hypothetical protein 653 82 IAI1 alignment trimmed tree collapsed 0.044 0.953
1273 156 GTP-binding protein EngB 654 126 55989 alignment trimmed tree collapsed 0.005 0.097
1274 156 Protein of unknown function DUF414 655 131 WV_060327 alignment trimmed tree collapsed 0.018 0.123
1275 156 hypothetical protein 22 O103:H2 str. 12009 alignment trimmed tree collapsed 0.000 1.431
1276 156 Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) 657 133 B171 alignment trimmed tree collapsed 0.000 0.679
1277 156 hypothetical protein 1304 658 1266 239 TA271 alignment trimmed tree collapsed 0.062 0.510
1278 156 Nitrogen regulation protein NR(I) 1034 2984 659 2622 3452 498 55989 alignment trimmed tree collapsed 0.003 0.234
1279 156 Nitrogen regulation protein NR(II) (EC 2.7.3.-) 1171 5083 5313 466 660 3973 597 O157:H7 EDL933 alignment trimmed tree collapsed 0.006 1.325
1280 156 Glutamine synthetase type I (EC 6.3.1.2) 661 134 55989 alignment trimmed tree collapsed 0.000 0.162
1281 156 GTP-binding protein TypA/BipA 662 131 MS 124-1 alignment trimmed tree collapsed 0.000 0.123
1282 156 Hypothetical transcriptional regulator yihL 1943 3182 4293 663 1254 1524 2862 394 O157:H7 str. EC4196 alignment trimmed tree collapsed 3.248 0.797
1283 156 hypothetical protein 664 111 W alignment trimmed tree collapsed 0.010 0.339
1284 156 Putative resistance protein 665 124 MS 124-1 alignment trimmed tree collapsed 0.008 0.341
1285 156 DeoR-type transcriptional regulator YihW 675 888 1711 2003 2569 2605 3838 4684 80 296 666 749 1130 2742 3206 3767 4389 4620 1092 TA280 alignment trimmed tree collapsed 1.012 0.425
1286 156 Sugar kinase YihV 674 1464 2776 3181 667 2527 3864 4619 530 E110019 alignment trimmed tree collapsed 2.984 0.837
1287 156 Oxidoreductase YihU 1704 2606 5214 668 742 3205 500 HS alignment trimmed tree collapsed 1.566 0.152
1288 156 Oxidoreductase YihU 1704 2606 5214 668 742 1686 3205 505 HS alignment trimmed tree collapsed 1.786 1.605
1289 156 Aldolase YihT 669 133 F11 alignment trimmed tree collapsed 0.467 1.441
1290 156 Alcohol dehydrogenase (EC 1.1.1.1) 1494 3842 3844 5373 290 670 2255 3067 559 55989 alignment trimmed tree collapsed 2.169 2.299
1291 156 Putative transport protein 41 ATCC 8739 alignment trimmed tree collapsed 0.002 0.030
1292 156 Shikimate transporter 1808 2155 3529 616 891 1255 2831 434 55989 alignment trimmed tree collapsed 1.180 0.013
1293 156 Sugar-1-epimerase YihR 1256 43 ATCC 8739 alignment trimmed tree collapsed 0.000 0.198
1294 156 probable haloacid dehalogenase-like hydrolase STY3852 1257 134 55989 alignment trimmed tree collapsed 0.000 0.206
1295 156 Ribonuclease BN (EC 3.1.-.-) 1258 131 MS 145-7 alignment trimmed tree collapsed 0.000 0.133
1296 156 D-tyrosyl-tRNA(Tyr) deacylase 1259 130 E24377A alignment trimmed tree collapsed 0.000 0.256
1297 156 GNAT family acetyltransferase YiiD potentially involved in tRNA processing 1260 128 1827-70 alignment trimmed tree collapsed 0.000 0.412
1298 156 Lipase, GDXG family 5173 1261 3223 197 B088 alignment trimmed tree collapsed 1.463 1.425
1299 156 Lipase, GDXG family 1261 66 55989 alignment trimmed tree collapsed 0.000 0.223
1300 156 FIG00642730: hypothetical protein 1977 1262 1458 72 H591 alignment trimmed tree collapsed 1.177 1.103
1301 156 Putative merR family bacterial regulatory protein 1978 1263 1457 146 55989 alignment trimmed tree collapsed 1.794 0.905
1302 156 FIG00638378: hypothetical protein 1303 1264 1265 226 55989 alignment trimmed tree collapsed 1.318 0.321
1303 156 hypothetical protein 1302 1264 1265 234 B7A alignment trimmed tree collapsed 1.403 1.178
1304 156 hypothetical protein 1277 4947 658 1266 655 O55:H7 str. CB9615 alignment trimmed tree collapsed 0.370 0.860
1305 156 formate dehydrogenase formation protein FdhE 120 134 B171 alignment trimmed tree collapsed 0.004 0.694
1306 156 Formate dehydrogenase O gamma subunit (EC 1.2.1.2) 4221 121 2705 265 E24377A alignment trimmed tree collapsed 0.871 0.554
1307 156 Formate dehydrogenase O beta subunit (EC 1.2.1.2) 4220 122 2706 250 ATCC 8739 alignment trimmed tree collapsed 0.261 0.635
1309 156 Formate dehydrogenase O alpha subunit (EC 1.2.1.2) @ selenocysteine-containing 0
1308 156 Formate dehydrogenase O alpha subunit (EC 1.2.1.2) @ selenocysteine-containing 1309 4218 4219 123 328 E24377A trimmed
1310 156 Formate dehydrogenase chain D (EC 1.2.1.2) 125 134 B171 alignment trimmed tree collapsed 0.015 0.063
1311 156 hypothetical protein 1
1312 156 FIG00638858: hypothetical protein 1175 91 55989 alignment trimmed tree collapsed 0.317 0.026
1313 156 Putative frv operon regulatory protein 1174 96 55989 alignment trimmed tree collapsed 0.015 0.392
1314 156 FIG00638402: hypothetical protein 2802 1173 4430 228 55989 alignment trimmed tree collapsed 0.062 1.219
1315 156 PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) 4945 1172 2055 135 SE11 alignment trimmed tree collapsed 0.000 0.878
1316 156 PTS system, fructose-specific IIA component (EC 2.7.1.69) 1370 1171 4288 269 TA271 alignment trimmed tree collapsed 1.787 0.001
1317 156 L-rhamnose mutarotase 1170 135 MS 107-1 alignment trimmed tree collapsed 0.038 1.064
1318 156 Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) 1169 134 55989 alignment trimmed tree collapsed 0.023 0.865
1319 156 L-rhamnose isomerase (EC 5.3.1.14) 1168 132 55989 alignment trimmed tree collapsed 0.026 0.028
1320 156 Rhamnulokinase (EC 2.7.1.5) 1167 134 IAI1 alignment trimmed tree collapsed 0.021 0.598
1321 156 FIG00638128: hypothetical protein 1166 129 E24377A alignment trimmed tree collapsed 0.067 1.895
1322 156 L-rhamnose operon regulatory protein RhaS 1164 1164 3966 390 E22 alignment trimmed tree collapsed 2.395 1.021
1323 156 L-rhamnose operon transcriptional activator RhaR 1322 2799 3755 1164 2473 4432 511 M605 alignment trimmed tree collapsed 2.346 0.736
1324 156 L-rhamnose-proton symporter 1163 94 E2348/69 alignment trimmed tree collapsed 0.010 0.301
1325 156 Manganese superoxide dismutase (EC 1.15.1.1) 3712 1162 1864 263 IAI1 alignment trimmed tree collapsed 0.955 1.252
1326 156 2-keto-3-deoxygluconate permease (KDG permease) 1160 131 TA206 alignment trimmed tree collapsed 0.000 0.644
1327 156 Uncharacterized protein conserved in bacteria 1159 134 ETEC H10407 alignment trimmed tree collapsed 0.019 0.707
1328 156 Copper sensory histidine kinase CpxA 1158 130 TA271 alignment trimmed tree collapsed 0.000 0.091
1329 156 Copper-sensing two-component system response regulator CpxR 817 820 1159 1980 2084 2102 3161 3503 3655 4458 5082 5259 265 467 1157 1455 1706 2034 2037 2248 2332 2397 3308 3432 3539 3583 3748 1778 W alignment trimmed tree collapsed 1.742 1.359
1330 156 P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc- resistance associated protein 1156 130 101-1 alignment trimmed tree collapsed 0.000 0.412
1331 156 Cobalt-zinc-cadmium resistance protein 1155 2715 261 O157:H7 str. EC4206 alignment trimmed tree collapsed 2.391 0.578
1332 156 6-phosphofructokinase (EC 2.7.1.11) 1154 132 BW2952 alignment trimmed tree collapsed 0.000 0.302
1333 156 Sulfate-binding protein Sbp 1153 129 55989 alignment trimmed tree collapsed 0.007 0.998
1334 156 CDP-diacylglycerol pyrophosphatase (EC 3.6.1.26) 1152 132 O157:H7 str. EC869 alignment trimmed tree collapsed 0.004 0.961
1335 156 Triosephosphate isomerase (EC 5.3.1.1) 1151 134 ATCC 8739 alignment trimmed tree collapsed 0.000 0.211
1336 156 Putative uncharacterized protein YiiQ 1150 129 H591 alignment trimmed tree collapsed 0.000 0.794
1337 156 Putative membrane protein 1149 130 55989 alignment trimmed tree collapsed 0.015 1.278
1338 156 hypothetical protein 3431 1148 3496 267 MS 21-1 alignment trimmed tree collapsed 1.230 0.137
1339 156 Universal stress protein D 2120 3989 1147 1852 4126 401 MS 115-1 alignment trimmed tree collapsed 1.717 1.168
1340 156 Ferredoxin--NADP(+) reductase (EC 1.18.1.2) 4132 1146 3636 187 TA271 alignment trimmed tree collapsed 0.000 0.635
1341 156 Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11) 2460 1145 3000 241 H736 alignment trimmed tree collapsed 0.657 0.940
1342 156 Glycerol kinase (EC 2.7.1.30) 1642 2657 1675 3808 4003 4015 515 E22 alignment trimmed tree collapsed 2.956 0.010
1343 156 Glycerol uptake facilitator protein 4004 148 EC4100B alignment trimmed tree collapsed 0.000 0.362
1344 156 Putative cytoplasmic protein 4005 126 SE11 alignment trimmed tree collapsed 0.000 0.632
1345 156 Ribonuclease E inhibitor RraA 4006 122 KO11 alignment trimmed tree collapsed 0.000 0.567
1346 156 1,4-dihydroxy-2-naphthoate octaprenyltransferase (EC 2.5.1.-) 4007 134 MS 146-1 alignment trimmed tree collapsed 0.000 1.490
1347 156 ATP-dependent hsl protease ATP-binding subunit HslU 4008 133 55989 alignment trimmed tree collapsed 0.007 1.504
1348 156 ATP-dependent protease HslV (EC 3.4.25.-) 4009 133 MS 187-1 alignment trimmed tree collapsed 0.006 0.653
1349 156 Cell division protein FtsN 4010 133 O83:H1 str. NRG 857C alignment trimmed tree collapsed 0.004 1.041
1350 156 Transcriptional (co)regulator CytR 2229 2577 2778 3669 5358 1942 3862 3940 4011 4361 4455 682 55989 alignment trimmed tree collapsed 1.970 1.551
1351 156 hypothetical protein 4012 56 DH1 alignment trimmed tree 0.000 0.000
1352 156 Helicase PriA essential for oriC/DnaA-independent DNA replication 4013 132 O111:H- str. 11128 alignment trimmed tree collapsed 0.002 0.688
1353 156 LSU ribosomal protein L31p 5447 3739 4014 294 UM146 alignment trimmed tree collapsed 0.870 1.073
1354 156 core protein 3 1827-70 alignment trimmed tree collapsed 0.030 1.136
1355 156 COG3209: Rhs family protein 5198 116 55989 alignment trimmed tree collapsed 0.018 0.413
1356 156 Insertion element iso-IS1n protein insB 105 650 655 727 1680 2111 2317 2676 3197 3499 3909 4596 4640 4980 5064 544 MS 182-1 alignment trimmed tree collapsed 0.519 1.729
1357 156 hypothetical protein 3891 133 IAI39 alignment trimmed tree collapsed 0.018 0.528
1358 156 hypothetical protein 3891 133 E110019 alignment trimmed tree collapsed 0.047 0.663
1359 156 Methionine repressor MetJ 3890 132 E2348/69 alignment trimmed tree 0.000 0.000
1360 156 Cystathionine gamma-synthase (EC 2.5.1.48) 3889 133 B7A alignment trimmed tree collapsed 0.014 0.105
1361 156 Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) 5559 2040 203 55989 alignment trimmed tree collapsed 0.000 0.731
1362 156 hypothetical protein 2184 76 M718 alignment trimmed tree collapsed 0.000 0.140
1363 156 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) 2183 134 55989 alignment trimmed tree collapsed 0.007 0.104
1364 156 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) 131 B str. REL606 alignment trimmed tree collapsed 0.005 3.835
1365 156 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) 4283 158 F11 alignment trimmed tree collapsed 0.012 0.367
1366 156 hypothetical protein 4284 153 KO11 alignment trimmed tree collapsed 1.681 0.410
1367 156 hypothetical protein 4285 129 O157:H7 str. TW14588 alignment trimmed tree collapsed 0.020 1.003
1368 156 Glycerol dehydrogenase (EC 1.1.1.6) 5291 408 4286 222 55989 alignment trimmed tree collapsed 0.003 0.805
1369 156 Transaldolase (EC 2.2.1.2) 4668 3782 4287 266 2362-75 alignment trimmed tree collapsed 0.000 1.308
1370 156 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) 1316 2800 4945 1171 2055 4288 4431 461 SE11 alignment trimmed tree collapsed 2.181 0.905
1371 156 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) 1
1372 156 PTS system, fructose-specific IIC component (EC 2.7.1.69) 2804 4945 2055 4428 350 TA206 alignment trimmed tree collapsed 1.641 0.879
1373 156 PTS system fructose-like IIB component 1 precursor (EC 2.7.1.69) 1315 1376 2805 3244 4945 514 1172 2055 4291 4294 4427 726 WV_060327 alignment trimmed tree collapsed 1.151 1.810
1374 156 Pyruvate formate-lyase (EC 2.3.1.54) 4666 3784 4292 256 55989 alignment trimmed tree collapsed 1.442 0.544
1375 156 Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) 4667 4752 764 3783 4293 413 B7A alignment trimmed tree collapsed 2.136 0.405
1376 156 PTS system fructose-like IIB component 2 precursor (EC 2.7.1.69) 1373 2805 4945 2055 4291 4294 4427 450 TA271 alignment trimmed tree collapsed 1.340 0.612
1377 156 Transcriptional regulator, AraC family 2799 4432 253 E22 alignment trimmed tree collapsed 0.000 0.992
1378 156 UPF0141 membrane protein YijP possibly required for phosphoethanolamine modification of lipopolysaccharide 4296 154 55989 alignment trimmed tree collapsed 0.234 0.476
1379 156 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) 4297 133 MS 84-1 alignment trimmed tree collapsed 0.000 0.901
1380 156 Acetylornithine deacetylase (EC 3.5.1.16) 4299 133 O111:H- str. 11128 alignment trimmed tree collapsed 0.006 0.716
1381 156 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) 4300 129 E24377A alignment trimmed tree collapsed 0.016 0.956
1382 156 Acetylglutamate kinase (EC 2.7.2.8) 130 APEC O1 alignment trimmed tree collapsed 0.000 0.648
1383 156 Argininosuccinate lyase (EC 4.3.2.1) 1858 133 55989 alignment trimmed tree collapsed 0.010 0.157
1384 157 HTH-type transcriptional regulator hdfR 1123 2018 136 O55:H7 str. CB9615 alignment trimmed tree collapsed 0.015 0.155
1385 157 Protein yifE 1122 131 O157:H7 str. EC4196 alignment trimmed tree collapsed 0.000 0.088
1386 157 MG(2+) CHELATASE FAMILY PROTEIN / ComM-related protein 1121 132 BL21(DE3) alignment trimmed tree collapsed 0.010 1.056
1387 157 Acetolactate synthase large subunit (EC 2.2.1.6) 1555 5638 677 1120 1772 3854 517 55989 alignment trimmed tree collapsed 1.026 0.745
1388 157 Acetolactate synthase small subunit (EC 2.2.1.6) 1119 133 55989 alignment trimmed tree 0.000 0.000
1389 157 Branched-chain amino acid aminotransferase (EC 2.6.1.42) 1118 134 HS alignment trimmed tree collapsed 0.004 0.548
1390 157 Dihydroxy-acid dehydratase (EC 4.2.1.9) 1
1391 157 Threonine dehydratase biosynthetic (EC 4.3.1.19) 1116 129 E110019 alignment trimmed tree collapsed 0.007 0.821
1392 157 HTH-type transcriptional regulator IlvY 739 2736 2823 18 98 965 1115 2018 2190 773 E110019 alignment trimmed tree collapsed 2.665 0.442
1393 157 Ketol-acid reductoisomerase (EC 1.1.1.86) 1114 134 55989 alignment trimmed tree collapsed 0.007 0.364
1394 157 hypothetical protein 1
1395 157 FIG00642180: hypothetical protein 23 MS 124-1 alignment trimmed tree collapsed 0.020 0.210
1396 157 ATP-dependent DNA helicase Rep 1435 1112 3160 259 55989 alignment trimmed tree collapsed 1.159 0.788
1397 157 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase (EC 3.6.1.40) 1111 137 MS 84-1 alignment trimmed tree collapsed 0.000 0.188
1398 157 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase (EC 3.6.1.40) 2922 1111 242 MS 84-1 alignment trimmed tree collapsed 1.098 0.765
1399 157 ATP-dependent RNA helicase RhlB 1110 132 E2348/69 alignment trimmed tree collapsed 0.003 0.197
1400 157 Thioredoxin 3013 1109 2651 270 E22 alignment trimmed tree collapsed 0.000 0.233
1401 157 FIG00638701: hypothetical protein 12 str. K-12 substr. MG1655 alignment trimmed tree 0.000 0.000
1402 157 Transcription termination factor Rho 1108 137 O157:H7 alignment trimmed tree collapsed 0.000 0.188
1403 157 orf; Unknown function 1107 114 B171 alignment trimmed tree collapsed 0.000 0.686
1404 157 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) 1106 132 W alignment trimmed tree collapsed 0.004 0.829
1405 157 regulator of length of O-antigen component of lipopolysaccharide chains 3602 5278 1105 1814 375 B171 alignment trimmed tree collapsed 2.919 0.059
1406 157 UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14) 2 1827-70 alignment trimmed
1407 157 UDP-glucose dehydrogenase (EC 1.1.1.22) 1103 129 O111:H- str. 11128 alignment trimmed tree collapsed 0.003 1.479
1408 157 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) 1102 286 SE11 alignment trimmed tree collapsed 2.935 0.796
1409 157 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) 1101 183 HS alignment trimmed tree collapsed 0.000 0.620
1410 157 Lipopolysaccharide biosynthesis protein RffC 1100 130 EC4100B alignment trimmed tree collapsed 0.000 0.717
1411 157 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase 3331 1099 4058 291 MS 69-1 alignment trimmed tree collapsed 0.000 0.235
1412 157 WzxE protein 1098 139 WV_060327 alignment trimmed tree collapsed 0.006 0.222
1413 157 4-alpha-L-fucosyltransferase (EC 2.4.1.-) 1097 130 TA271 alignment trimmed tree collapsed 0.015 0.505
1414 157 Putative ECA polymerase 1096 132 MS 187-1 alignment trimmed tree collapsed 0.000 0.862
1415 157 Probable UDP-N-acetyl-D-mannosaminuronic acid transferase (EC 2.4.1.-) 1095 134 MS 145-7 alignment trimmed tree collapsed 0.004 1.344
1416 157 Probable transport protein yifK 907 1161 3071 5086 5672 365 785 1094 1965 3294 774 MS 69-1 alignment trimmed tree collapsed 1.733 0.610
1417 157 Putative arylsulfatase regulatory protein 1658 246 55989 alignment trimmed tree collapsed 1.315 0.727
1418 157 Arylsulfatase (EC 3.1.6.1) 1144 110 H736 alignment trimmed tree collapsed 0.001 0.879
1419 157 hypothetical protein 53 O111:H- str. 11128 alignment trimmed tree collapsed 0.021 1.012
1420 157 Homolog of E. coli HemY protein 2973 133 55989 alignment trimmed tree collapsed 0.005 1.558
1421 157 Homolog of E. coli HemX protein 58 O55:H7 str. CB9615 alignment trimmed tree collapsed 0.015 1.279
1422 157 Homolog of E. coli HemX protein 1
1423 157 Uroporphyrinogen-III synthase (EC 4.2.1.75) 4065 134 O26:H11 str. 11368 alignment trimmed tree collapsed 0.013 0.455
1424 157 Porphobilinogen deaminase (EC 2.5.1.61) 4066 133 E24377A alignment trimmed tree collapsed 0.018 0.975
1425 157 Adenylate cyclase (EC 4.6.1.1) 4067 127 W alignment trimmed tree collapsed 0.002 0.915
1426 157 Frataxin homolog CyaY, facilitates iron supply for heme A synthesis or Fe-S cluster assembly 4068 134 HS alignment trimmed tree collapsed 0.010 0.959
1427 157 Possible exported protein 24 55989 alignment trimmed tree collapsed 0.049 1.311
1428 157 Possible exported protein 56 E110019 alignment trimmed tree collapsed 0.009 0.739
1429 157 FIG00639368: hypothetical protein 4269 37 TA143 alignment trimmed tree collapsed 0.006 0.347
1430 157 Putative lipoprotein 3155 133 B7A alignment trimmed tree collapsed 0.016 1.518
1431 157 Diaminopimelate epimerase (EC 5.1.1.7) 3156 133 DH1 alignment trimmed tree collapsed 0.000 0.318
1432 157 Protein of unknown function DUF484 3157 132 TA271 alignment trimmed tree collapsed 0.000 0.879
1433 157 Tyrosine recombinase XerC 644 2558 1205 1498 3158 273 MS 185-1 alignment trimmed tree collapsed 0.000 0.163
1434 157 2-haloalkanoic acid dehalogenase (EC 3.8.1.2) 3159 132 IAI1 alignment trimmed tree collapsed 0.000 0.666
1435 157 ATP-dependent DNA helicase UvrD/PcrA 3160 125 B171 alignment trimmed tree collapsed 0.002 0.337
1436 157 COG3698: Predicted periplasmic protein 3161 130 O157:H7 str. EC4076 alignment trimmed tree collapsed 0.005 0.592
1437 157 Magnesium and cobalt transport protein CorA 2023 132 CFT073 alignment trimmed tree collapsed 0.000 0.168
1438 157 FIG00638425: hypothetical protein 2022 93 55989 alignment trimmed tree collapsed 0.101 0.357
1439 157 orf; Unknown function 94 55989 alignment trimmed tree collapsed 0.004 0.498
1440 157 Magnesium and cobalt transport protein CorA 1437 2023 2353 198 MS 78-1 alignment trimmed tree collapsed 0.090 0.970
1441 158 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) 2550 131 BW2952 alignment trimmed tree collapsed 0.000 0.834
1442 158 N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) 2549 132 55989 alignment trimmed tree collapsed 0.005 0.577
1443 158 ATP synthase epsilon chain (EC 3.6.3.14) 2548 132 B7A alignment trimmed tree collapsed 0.000 0.271
1444 158 ATP synthase beta chain (EC 3.6.3.14) 2547 127 O127:H6 str. E2348/69 alignment trimmed tree collapsed 0.000 0.180
1445 158 ATP synthase gamma chain (EC 3.6.3.14) 2546 132 MS 78-1 alignment trimmed tree collapsed 0.004 1.837
1446 158 ATP synthase alpha chain (EC 3.6.3.14) 2545 132 FVEC1412 alignment trimmed tree collapsed 0.000 0.124
1447 158 ATP synthase delta chain (EC 3.6.3.14) 2544 131 KO11 alignment trimmed tree collapsed 0.000 0.356
1448 158 ATP synthase B chain (EC 3.6.3.14) 2543 131 O83:H1 str. NRG 857C alignment trimmed tree collapsed 0.000 0.088
1449 158 ATP synthase C chain (EC 3.6.3.14) 2542 133 MS 69-1 alignment trimmed tree 0.000 0.000
1450 158 ATP synthase A chain (EC 3.6.3.14) 2541 128 MS 84-1 alignment trimmed tree collapsed 0.000 0.678
1451 158 ATP synthase protein I 2540 128 HS alignment trimmed tree collapsed 0.000 0.194
1452 158 rRNA small subunit methyltransferase, glucose inhibited division protein GidB 2539 129 CFT073 alignment trimmed tree collapsed 0.000 0.358
1453 158 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 2538 122 H591 alignment trimmed tree collapsed 0.002 0.710
1454 158 Flavoprotein MioC 2645 2684 2537 3821 4585 397 536A alignment trimmed tree collapsed 0.007 1.218
1455 158 Regulatory protein AsnC 4736 421 2536 258 55989 alignment trimmed tree collapsed 0.000 0.970
1456 158 Aspartate--ammonia ligase (EC 6.3.1.1) 2535 128 55989 alignment trimmed tree collapsed 0.007 0.162
1457 158 hypothetical protein 2534 131 B088 alignment trimmed tree collapsed 0.003 0.098
1458 158 Putative regulator protein 2533 126 TA271 alignment trimmed tree collapsed 0.013 1.241
1459 158 Kup system potassium uptake protein 2532 132 KO11 alignment trimmed tree collapsed 0.000 0.609
1460 158 Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) 2531 128 101-1 alignment trimmed tree collapsed 0.000 0.902
1461 158 Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) 1645 3993 4265 2530 2889 579 W alignment trimmed tree collapsed 1.315 1.110
1462 158 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) 2974 3222 496 2529 2614 451 B7A alignment trimmed tree collapsed 1.667 1.122
1463 158 Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) 1644 2021 2977 4268 5475 209 1677 1745 2616 2886 825 UM146 alignment trimmed tree collapsed 0.004 1.731
1464 158 Ribokinase (EC 2.7.1.15) 674 1286 2203 3181 3543 3840 294 667 2156 2527 4435 4619 709 042 alignment trimmed tree collapsed 0.000 1.565
1465 158 Ribose operon repressor 942 2021 3669 3714 4084 5640 821 1436 1745 1770 1860 2526 3940 974 042 alignment trimmed tree collapsed 0.968 1.480
1466 158 Permeases of the major facilitator superfamily 3159 267 2525 262 55989 alignment trimmed tree collapsed 0.007 0.903
1467 158 Transcriptional regulator, GntR family 1482 1810 2253 893 2524 3079 3678 3702 628 O157:H7 str. EC4042 alignment trimmed tree collapsed 2.719 0.696
1468 158 FIG00638398: hypothetical protein 5 55989 alignment trimmed tree collapsed 0.000 0.500
1469 159 Multidrug resistance protein A 1667 2219 4160 226 55989 alignment trimmed tree collapsed 0.283 0.753
1470 159 GTPase (EC 3.6.1.-) 1668 2220 4159 229 SMS-3-5 alignment trimmed tree collapsed 0.028 0.559
1471 159 FIG00639890: hypothetical protein 4158 23 TA271 alignment trimmed tree collapsed 0.116 3.321
1472 159 PTS system, mannitol-specific IIC component (EC 2.7.1.69) / PTS system, mannitol-specific IIB component (EC 2.7.1.69) / PTS system, mannitol-specific IIA component (EC 2.7.1.69) 4157 132 HS alignment trimmed tree collapsed 0.006 0.367
1473 159 Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) 4156 132 TA271 alignment trimmed tree collapsed 0.003 0.131
1474 159 Mannitol operon repressor 1
1475 159 Uncharacterized protein YibL 131 E110019 alignment trimmed tree collapsed 0.025 6.661
1476 159 Uncharacterized protein YibL 1448 133 E22 alignment trimmed tree collapsed 0.000 0.406
1477 159 putative lipoprotein 2025 69 55989 alignment trimmed tree collapsed 0.009 0.973
1478 159 hypothetical protein 1
1479 159 FIG00638466: hypothetical protein 3081 118 B088 alignment trimmed tree collapsed 0.021 0.604
1480 159 L-lactate permease 2310 3080 3672 291 MS 119-7 alignment trimmed tree collapsed 0.001 0.892
1481 159 L-lactate permease 2310 3080 3672 307 MS 119-7 alignment trimmed tree collapsed 0.279 0.142
1482 159 Lactate-responsive regulator LldR in Enterobacteria, GntR family 3079 133 55989 alignment trimmed tree collapsed 0.004 0.040
1483 159 L-lactate dehydrogenase (EC 1.1.2.3) 3078 134 O157:H7 str. EC4024 alignment trimmed tree collapsed 0.003 0.686
1484 159 tRNA (cytosine34-2'-O-)-methyltransferase (EC 2.1.1.-) 1531 2565 3077 266 O111:H- str. 11128 alignment trimmed tree collapsed 1.491 0.791
1485 159 Serine acetyltransferase (EC 2.3.1.30) 3076 132 1212A alignment trimmed tree collapsed 0.000 0.194
1486 159 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) 3075 129 CFT073 alignment trimmed tree collapsed 0.000 0.305
1487 159 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) 3074 134 CFT073 alignment trimmed tree collapsed 0.000 0.588
1488 159 Glutaredoxin 3 (Grx3) 3709 4693 3073 3758 403 MS 145-7 alignment trimmed tree collapsed 1.240 1.274
1489 159 FIG136845: Rhodanese-related sulfurtransferase 3072 130 O157:H7 str. EC4076 alignment trimmed tree collapsed 0.000 0.352
1490 159 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) 3071 133 B088 alignment trimmed tree collapsed 0.004 0.652
1491 159 Cell wall endopeptidase, family M23/M37 3070 124 53638 alignment trimmed tree collapsed 0.000 0.716
1492 159 Possible divergent polysaccharide deacetylase 3069 127 TA206 alignment trimmed tree collapsed 0.010 0.290
1493 159 Beta-1,3-galactosyltransferase / Beta-1,4-galactosyltransferase 3068 133 55989 alignment trimmed tree collapsed 0.015 0.330
1494 159 L-threonine 3-dehydrogenase (EC 1.1.1.103) 1290 2973 3170 3842 3844 5301 5373 290 399 670 2255 2613 2743 3067 3795 943 B171 alignment trimmed tree collapsed 2.131 1.592
1495 159 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) 3066 133 55989 alignment trimmed tree collapsed 0.005 0.229
1496 159 Involved in lipopolysaccharide biosynthesis 3065 57 O157:H7 alignment trimmed tree collapsed 0.000 0.511
1497 159 ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20) 3116 2856 3137 175 str. K-12 substr. DH10B alignment trimmed tree collapsed 0.000 0.570
1498 159 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) 1
1499 159 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) 3136 132 K12 alignment trimmed tree collapsed 0.008 0.037
1500 159 Lipopolysaccharide heptosyltransferase I (EC 2.4.1.-) 3135 130 O111:H- str. 11128 alignment trimmed tree collapsed 0.081 0.292
1501 159 Oligosaccharide repeat unit polymerase Wzy; O-antigen ligase 3134 59 O157:H7 str. EC4113 alignment trimmed tree collapsed 0.000 0.444
1502 159 Lipopolysaccharide 1,2-N-acetylglucosaminetransferase (EC 2.4.1.56) 3133 53 B088 alignment trimmed tree collapsed 0.000 0.325
1503 159 UDP-galactose:(galactosyl) LPS alpha1,2-galactosyltransferase WaaW (EC 2.4.1.-) 121 O157:H7 str. EC869 alignment trimmed tree collapsed 1.177 0.414
1504 159 Lipopolysaccharide core biosynthesis protein RfaY 129 O157:H7 alignment trimmed tree collapsed 0.799 0.315
1505 159 UDP-glucose:(glucosyl)lipopolysaccharide alpha-1,3-glucosyltransferase WaaO (EC 2.4.1.-) 86 O157:H7 str. Sakai alignment trimmed tree collapsed 0.778 0.788
1506 159 Lipopolysaccharide core biosynthesis protein WaaP (EC 2.7.-.-), heptosyl-I-kinase 2588 134 SE11 alignment trimmed tree collapsed 0.005 0.382
1507 159 UDP-glucose:(heptosyl) LPS alpha1,3-glucosyltransferase WaaG (EC 2.4.1.-) 2587 133 MS 145-7 alignment trimmed tree collapsed 0.000 0.425
1508 159 Lipopolysaccharide heptosyltransferase III (EC 2.4.1.-) 2586 126 O157:H7 EDL933 alignment trimmed tree collapsed 0.000 0.384
1509 159 hypothetical protein 1
1510 159 3-deoxy-D-manno-octulosonic-acid transferase (EC 2.-.-.-) 2585 128 IHE3034 alignment trimmed tree collapsed 0.003 0.710
1511 159 Phosphopantetheine adenylyltransferase (EC 2.7.7.3) 2584 133 O157:H7 str. EC4042 alignment trimmed tree collapsed 0.000 0.487
1512 159 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) 5061 2119 2583 252 55989 alignment trimmed tree collapsed 0.009 0.985
1513 159 LSU ribosomal protein L33p 2582 133 TA271 alignment trimmed tree 0.000 0.000
1514 159 LSU ribosomal protein L28p 2581 132 K12 alignment trimmed tree collapsed 0.000 0.383
1515 159 DNA repair protein RadC 2580 129 MS 119-7 alignment trimmed tree collapsed 0.006 0.151
1516 159 Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5) 2579 131 SE11 alignment trimmed tree collapsed 0.008 1.832
1517 159 Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23) 2578 134 MS 198-1 alignment trimmed tree collapsed 0.000 0.458
1518 159 Transcriptional regulator SlmA, TetR family 2577 133 O157:H7 EDL933 alignment trimmed tree collapsed 0.000 0.594
1519 159 Orotate phosphoribosyltransferase (EC 2.4.2.10) 2576 134 OP50 alignment trimmed tree collapsed 0.010 0.792
1520 159 Ribonuclease PH (EC 2.7.7.56) 2575 133 ATCC 8739 alignment trimmed tree collapsed 0.012 1.259
1521 159 Ribonuclease PH (EC 2.7.7.56) 2575 133 APEC O1 alignment trimmed tree collapsed 0.000 0.110
1522 159 Protein YicC 2574 134 042 alignment trimmed tree collapsed 0.000 0.781
1523 159 hypothetical protein 2573 76 O127:H6 str. E2348/69 alignment trimmed tree collapsed 0.000 0.547
1524 159 DNA-damage-inducible protein D 2572 116 B7A alignment trimmed tree collapsed 0.180 0.314
1525 159 Putative inner membrane protein 5724 2088 2571 261 ATCC 8739 alignment trimmed tree collapsed 0.000 0.715
1526 159 DNA ligase (EC 6.5.1.2), LigB 2570 126 EC4100B alignment trimmed tree collapsed 0.009 1.046
1527 159 hypothetical protein 2569 65 1125A alignment trimmed tree collapsed 0.000 0.787
1528 159 Guanylate kinase (EC 2.7.4.8) 1139 2276 2568 259 ATCC 8739 alignment trimmed tree collapsed 1.355 0.432
1529 159 DNA-directed RNA polymerase omega subunit (EC 2.7.7.6) 2567 133 BL21(DE3) alignment trimmed tree 0.000 0.000
1530 159 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) 2566 134 TA280 alignment trimmed tree collapsed 0.000 0.570
1531 159 tRNA (Guanosine18-2'-O-) -methyltransferase (EC 2.1.1.34) 2565 124 55989 alignment trimmed tree collapsed 0.009 0.599
1532 159 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 130 55989 alignment trimmed tree collapsed 0.002 1.354
1533 159 Sodium/glutamate symport protein 2724 141 MS 182-1 alignment trimmed tree collapsed 0.000 0.239
1534 159 Sodium/glutamate symport protein 2724 136 IAI39 alignment trimmed tree collapsed 0.037 0.126
1535 159 Xanthine permease 2544 575 2723 264 SE11 alignment trimmed tree collapsed 0.970 1.057
1536 159 Putative exported protein 2722 133 O83:H1 str. NRG 857C alignment trimmed tree collapsed 0.033 0.758
1537 159 Alpha-xylosidase (EC 3.2.1.-) 120 55989 alignment trimmed tree collapsed 0.000 1.492
1538 159 Xyloside transporter XynT 3665 3547 4660 466 IAI39 alignment trimmed tree collapsed 2.080 0.207
1539 159 FIG00637920: hypothetical protein 4178 90 1827-70 alignment trimmed tree collapsed 0.000 0.600
1540 159 Sugar efflux transporter B 3249 5631 518 1559 3025 260 55989 alignment trimmed tree collapsed 0.359 0.037
1541 159 hypothetical protein 3024 138 ED1a alignment trimmed tree collapsed 0.014 0.255
1542 159 Methionine ABC transporter substrate-binding protein 5553 3023 4792 263 TA280 alignment trimmed tree collapsed 0.571 0.210
1543 159 hypothetical protein 44 SE11 alignment trimmed tree 0.000 0.000
1544 159 probable secreted protein STY4010 3022 131 MS 107-1 alignment trimmed tree collapsed 0.000 0.578
1545 159 Putative transport protein 3021 76 str. K-12 substr. MG1655 alignment trimmed tree collapsed 0.003 0.681
1546 159 probable membrane protein YPO2654 131 E22 alignment trimmed tree collapsed 0.000 0.464
1547 159 Xanthine/uracil/thiamine/ascorbate permease family protein 54 MS 119-7 alignment trimmed tree collapsed 0.011 1.034
1548 159 Adenine deaminase (EC 3.5.4.2) 671 131 ATCC 8739 alignment trimmed tree collapsed 0.000 0.924
1549 159 Hexose phosphate transport protein UhpT 672 134 CFT073 alignment trimmed tree collapsed 0.000 0.087
1550 159 Hexose phosphate transport protein UhpT 3321 672 277 1827-70 alignment trimmed tree collapsed 1.848 0.336
1551 159 Hexose phosphate uptake regulatory protein UhpC 771 3321 66 672 673 491 MS 107-1 alignment trimmed tree collapsed 0.003 0.786
1552 159 Sensor histidine protein kinase UhpB, glucose-6-phosphate specific (EC 2.7.13.3) 674 160 55989 alignment trimmed tree collapsed 0.003 0.484
1553 159 Transcriptional regulatory protein UhpA 2783 3303 3445 5242 239 540 566 675 2394 783 MS 187-1 alignment trimmed tree collapsed 0.000 0.755
1554 159 Acetolactate synthase small subunit (EC 2.2.1.6) 5639 676 1771 263 B7A alignment trimmed tree collapsed 0.010 0.431
1555 159 Acetolactate synthase large subunit (EC 2.2.1.6) 1387 5638 677 1120 1772 3854 516 MS 69-1 alignment trimmed tree collapsed 1.023 0.385
1556 159 hypothetical protein 679 15 MS 119-7 alignment trimmed tree collapsed 0.000 0.406
1557 159 Multidrug resistance protein D 680 200 O157:H7 str. EC4486 alignment trimmed tree collapsed 0.012 0.669
1558 159 Putative transcriptional regulator 681 130 E22 alignment trimmed tree collapsed 0.068 0.155
1559 159 Putative inner membrane protein 682 134 W alignment trimmed tree collapsed 0.000 0.116
1560 159 Putative inner membrane protein 683 132 CFT073 alignment trimmed tree collapsed 0.000 0.171
1561 159 hypothetical protein 85 E24377A alignment trimmed tree collapsed 0.000 0.844
1562 159 Choline-sulfatase (EC 3.1.6.6) 686 119 H591 alignment trimmed tree collapsed 0.009 0.829
1563 159 Sodium-Choline Symporter 687 118 KO11 alignment trimmed tree collapsed 0.006 0.466
1564 159 Hypothetical transcriptional regulator yidL 688 124 E22 alignment trimmed tree collapsed 0.019 0.879
1565 159 Maltose-6'-phosphate glucosidase (EC 3.2.1.122) 689 87 O157:H7 str. EC869 alignment trimmed tree collapsed 0.017 0.323
1566 159 Maltose-6'-phosphate glucosidase (EC 3.2.1.122) 1165 3798 690 1221 3967 366 MS 78-1 alignment trimmed tree collapsed 2.189 0.929
1567 159 COG1263: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 659 3670 4426 5026 691 1305 3722 3941 4023 577 MS 187-1 alignment trimmed tree collapsed 2.101 0.846
1568 159 PTS system, maltose and glucose-specific IIC component (EC 2.7.1.69) / PTS system, maltose and glucose-specific IIB component (EC 2.7.1.69) 3670 4426 691 1305 3722 3941 422 042 alignment trimmed tree collapsed 2.118 1.378
1569 159 HTH-type transcriptional regulator YidP 1147 1943 4293 4944 692 1254 2056 2269 2862 501 str. K-12 substr. DH10B alignment trimmed tree collapsed 2.547 1.116
1570 159 Mediator of hyperadherence YidE 4691 693 3760 257 TA271 alignment trimmed tree collapsed 0.025 1.105
1571 159 hypothetical protein 694 102 CFT073 alignment trimmed tree collapsed 0.000 1.152
1572 159 16 kDa heat shock protein B 1573 695 696 268 E2348/69 alignment trimmed tree collapsed 0.008 0.120
1573 159 16 kDa heat shock protein A 1572 695 696 268 APEC O1 alignment trimmed tree collapsed 0.831 0.126
1574 159 FIG00640032: hypothetical protein 19 O157:H7 str. TW14588 alignment trimmed tree collapsed 0.039 0.619
1575 159 Outer membrane lipoprotein YidQ 697 134 B171 alignment trimmed tree collapsed 0.000 0.522
1576 159 Uncharacterized protein YidR 698 133 B7A alignment trimmed tree collapsed 0.000 1.363
1577 159 Uncharacterized protein YidS 699 130 MS 107-1 alignment trimmed tree collapsed 0.032 0.287
1578 159 D-galactonate transporter 771 993 1706 2248 2681 3321 5368 66 700 744 2338 3576 3823 968 SMS-3-5 alignment trimmed tree collapsed 2.555 0.988
1579 159 Galactonate dehydratase (EC 4.2.1.6) 992 3627 3577 3796 278 B354 alignment trimmed tree collapsed 1.560 1.265
1580 159 2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21) 1928 141 55989 alignment trimmed tree collapsed 1.055 0.557
1581 159 2-dehydro-3-deoxygalactonokinase (EC 2.7.1.58) 1927 139 B7A alignment trimmed tree collapsed 0.010 0.581
1582 159 D-Galactonate repressor DgoR 734 1467 1810 4302 5673 46 366 893 1926 2524 3678 3791 893 MS 182-1 alignment trimmed tree collapsed 3.139 1.367
1583 159 Putative replicase 1925 126 str. K-12 substr. MG1655 alignment trimmed tree collapsed 0.536 0.669
1584 159 Phosphatase YidA 1239 4688 4976 809 1924 2192 3763 3785 654 IAI39 alignment trimmed tree collapsed 2.257 0.186
1585 159 hypothetical protein 1923 132 O157:H7 EDL933 alignment trimmed tree collapsed 0.000 0.862
1586 159 DNA gyrase subunit B (EC 5.99.1.3) 1922 132 53638 alignment trimmed tree collapsed 0.002 0.654
1587 159 DNA recombination and repair protein RecF 1921 134 WV_060327 alignment trimmed tree collapsed 0.000 0.198
1588 159 DNA polymerase III beta subunit (EC 2.7.7.7) 1920 134 ATCC 8739 alignment trimmed tree collapsed 0.000 0.259
1589 159 Chromosomal replication initiator protein DnaA 122 101-1 alignment trimmed tree collapsed 0.002 0.536
1590 159 LSU ribosomal protein L34p 1918 134 UMN026 alignment trimmed tree 0.000 0.000
1591 159 Ribonuclease P protein component (EC 3.1.26.5) 1917 121 MS 175-1 alignment trimmed tree collapsed 0.000 0.520
1592 159 Inner membrane protein translocase component YidC, long form 1916 133 E110019 alignment trimmed tree collapsed 0.000 0.581
1593 159 GTPase and tRNA-U34 5-formylation enzyme TrmE 1915 132 101-1 alignment trimmed tree collapsed 0.005 0.023
1594 159 Tryptophanase (EC 4.1.99.1) 1914 133 E24377A alignment trimmed tree collapsed 0.003 0.777
1595 159 Low affinity tryptophan permease 1746 4003 714 1913 2500 390 B171 alignment trimmed tree collapsed 1.693 0.579
1596 159 Putative transport protein 3265 532 1912 271 E22 alignment trimmed tree collapsed 0.003 0.671
1597 159 Putative LysR-family transcriptional regulator YidZ 5324 5637 1773 1911 4708 355 E22 alignment trimmed tree collapsed 0.020 0.110
1598 159 FIG004212: hypothetical protein 1910 116 HS alignment trimmed tree collapsed 0.000 0.289
1599 159 Putative oxidoreductase 131 O157:H7 EDL933 alignment trimmed tree collapsed 0.000 0.635
1600 159 putative membrane/transport protein 1107 1547 2546 342 1510 2109 465 ED1a alignment trimmed tree collapsed 0.003 0.013
1601 159 Putative phosphatase YieH 3790 341 857 1439 282 MS 145-7 alignment trimmed tree collapsed 0.005 0.171
1602 159 hypothetical protein 340 92 O26:H11 str. 11368 alignment trimmed tree collapsed 0.046 0.318
1603 159 Colicin E2 tolerance protein CbrC 339 56 SE15 alignment trimmed tree collapsed 0.006 0.702
1604 159 hypothetical protein 1724 5024 761 3350 4021 353 K12 alignment trimmed tree collapsed 1.530 0.338
1605 159 hypothetical protein 1
1606 159 Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8) 3351 81 B7A alignment trimmed tree collapsed 0.006 1.367
1607 159 Maltoporin (maltose/maltodextrin high-affinity receptor, phage lambda receptor protein) 4288 2867 3352 110 TA271 alignment trimmed tree collapsed 0.014 0.268
1608 159 6-phospho-beta-glucosidase (EC 3.2.1.86) 2421 2579 4287 1490 2868 3353 4363 407 KO11 alignment trimmed tree collapsed 0.015 0.358
1609 159 PTS system, beta-glucoside-specific IIB component (EC 2.7.1.69) / PTS system, beta-glucoside-specific IIC component (EC 2.7.1.69) / PTS system, beta-glucoside-specific IIA component (EC 2.7.1.69) 3354 84 KO11 alignment trimmed tree collapsed 0.002 0.550
1610 159 Beta-glucoside bgl operon antiterminator, BglG family 3355 92 TA206 alignment trimmed tree collapsed 0.016 0.750
1611 159 Beta-glucoside bgl operon antiterminator, BglG family 3355 124 B171 alignment trimmed tree collapsed 0.014 0.611
1612 159 Phosphate transport system regulatory protein PhoU 3357 126 MS 196-1 alignment trimmed tree collapsed 0.000 0.591
1613 159 Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1) 1150 1781 1857 2032 2037 2038 2048 2837 3203 3387 3448 4082 4183 4566 4701 4710 4732 4765 4790 4919 5003 5142 5189 5279 5380 4 92 283 418 623 866 1401 1438 1802 1815 1834 1869 1890 1899 1900 1905 2517 2564 2709 2929 3106 3237 3358 3383 3838 3847 4472 4843 3913 B7A alignment trimmed tree collapsed 1.953 0.260
1614 159 Phosphate transport system permease protein PstA (TC 3.A.1.7.1) 3359 133 B185 alignment trimmed tree collapsed 0.000 0.759
1615 159 Phosphate transport system permease protein PstC (TC 3.A.1.7.1) 3360 133 BL21(DE3) alignment trimmed tree collapsed 0.000 0.250
1616 159 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) 3361 133 E24377A alignment trimmed tree collapsed 0.006 0.607
1617 159 hypothetical protein 3362 43 MS 145-7 alignment trimmed tree collapsed 0.240 1.692
1618 159 type 1 fimbriae anchoring protein FimD 1727 2193 3190 4256 4798 5238 5702 170 236 1516 1600 3363 3663 4743 4925 1124 SE11 alignment trimmed tree collapsed 0.066 0.209
1619 159 type 1 fimbriae anchoring protein FimD 2193 5238 170 236 3363 3663 393 IAI1 alignment trimmed tree collapsed 2.653 0.170
1620 159 Putative fimbrial chaperone protein 1726 3191 4257 4796 5237 171 235 1515 1601 3364 4744 4926 797 55989 alignment trimmed tree collapsed 1.861 0.838
1621 159 Type-1 fimbrial protein, A chain precursor 1725 2191 2195 2196 4255 4933 5236 172 234 1599 2127 2149 3365 3661 4213 4319 932 55989 alignment trimmed tree collapsed 2.608 0.380
1622 160 Putative resistance protein 1847 132 55989 alignment trimmed tree collapsed 0.013 0.010
1623 160 Putative lipase 1848 126 H736 alignment trimmed tree collapsed 0.009 0.093
1624 160 DNA-3-methyladenine glycosylase (EC 3.2.2.20) 1849 133 55989 alignment trimmed tree collapsed 0.000 1.162
1625 160 Acetyltransferase (EC 2.3.1.-) 1038 728 1850 251 B7A alignment trimmed tree collapsed 1.953 0.837
1626 160 Biotin sulfoxide reductase (EC 1.-.-.-) 3633 3634 3965 4604 4742 325 773 1851 2358 2359 3306 805 O157:H7 str. FRIK966 alignment trimmed tree collapsed 0.008 0.777
1627 160 Biotin sulfoxide reductase (EC 1.-.-.-) 1
1628 160 putative outer membrane protein 2182 130 BL21 alignment trimmed tree collapsed 0.000 0.409
1629 160 2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) (EC 1.1.1.-) 2181 144 KO11 alignment trimmed tree collapsed 0.004 0.275
1630 160 probable exported protein YPO4070 2180 134 E110019 alignment trimmed tree collapsed 0.005 1.148
1631 160 hypothetical protein 1978 1457 2179 196 B7A alignment trimmed tree collapsed 0.000 0.677
1632 160 Cold shock protein CspA 3902 4595 4597 4727 5319 2178 3315 3316 3937 4574 4703 947 B354 alignment trimmed tree collapsed 1.241 0.424
1633 160 putative membrane permeability altering protein 2642 5272 2177 497 KO11 alignment trimmed tree collapsed 0.952 0.392
1634 160 Glycyl-tRNA synthetase beta chain (EC 6.1.1.14) 2176 135 W alignment trimmed tree collapsed 0.007 0.090
1635 160 Glycyl-tRNA synthetase beta chain (EC 6.1.1.14) 1
1636 160 Glycyl-tRNA synthetase alpha chain (EC 6.1.1.14) 1670 131 WV_060327 alignment trimmed tree collapsed 0.000 0.442
1637 160 Uncharacterized lipoprotein YsaB precursor 1671 122 E22 alignment trimmed tree collapsed 0.041 0.763
1638 160 Inner membrane protein YiaH 1672 133 O111:H- str. 11128 alignment trimmed tree collapsed 0.027 0.077
1639 160 Inner membrane protein YiaH 1672 135 UTI89 alignment trimmed tree collapsed 0.013 0.112
1640 160 Inner membrane protein YiaA 1641 1673 1674 188 IAI1 alignment trimmed tree collapsed 1.496 0.699
1641 160 Inner membrane protein YiaB 1640 1673 1674 255 B088 alignment trimmed tree collapsed 1.534 1.398
1642 160 Xylulose kinase (EC 2.7.1.17) 1342 1660 4263 1675 2891 4003 4630 534 MS 115-1 alignment trimmed tree collapsed 2.889 0.815
1643 160 Xylose isomerase (EC 5.3.1.5) 1676 132 2362-75 alignment trimmed tree collapsed 0.003 0.874
1644 160 Xylose ABC transporter, periplasmic xylose-binding protein XylF 3224 498 1677 258 E2348/69 alignment trimmed tree collapsed 1.549 0.909
1645 160 D-xylose transport ATP-binding protein XylG 1461 3223 3993 4265 5476 210 497 2530 2615 2889 993 MS 78-1 alignment trimmed tree collapsed 1.259 0.723
1646 160 Xylose ABC transporter, permease protein XylH 132 MS 69-1 alignment trimmed tree collapsed 0.003 1.305
1647 160 Xylose activator XylR (AraC family) 3261 131 55989 alignment trimmed tree collapsed 0.003 3.196
1648 160 BAX protein 3262 134 55989 alignment trimmed tree collapsed 0.005 3.020
1649 160 FIG00641747: hypothetical protein 3263 20 MS 124-1 alignment trimmed tree collapsed 0.020 0.640
1650 160 Periplasmic alpha-amylase (EC 3.2.1.1) 1
1651 160 Periplasmic alpha-amylase (EC 3.2.1.1) 3264 134 55989 alignment trimmed tree collapsed 0.017 0.009
1652 160 Valine--pyruvate aminotransferase (EC 2.6.1.66) 3265 133 HS alignment trimmed tree collapsed 0.006 0.754
1653 160 Electron transport protein HydN 1118 1307 2341 2547 2549 2575 2592 2879 2897 3635 3727 3730 4220 4743 122 600 772 1508 1509 1929 1932 2295 2412 2706 3266 3907 4359 4413 1876 O157:H7 str. EC4486 alignment trimmed tree collapsed 1.640 2.034
1654 160 Transcriptional regulator, IclR family 5211 3267 4891 247 KO11 alignment trimmed tree collapsed 1.514 0.380
1655 160 3-dehydro-L-gulonate 2-dehydrogenase (EC 1.1.1.130) 4910 5222 1693 3268 4928 386 SE11 alignment trimmed tree collapsed 2.820 1.263
1656 160 Putative sugar isomerase involved in processing of exogenous sialic acid 955 1804 888 1791 4634 396 E110019 alignment trimmed tree collapsed 2.251 0.384
1657 160 2,3-diketo-L-gulonate TRAP transporter small permease protein yiaM 4633 140 E110019 alignment trimmed tree collapsed 2.288 0.682
1658 160 2,3-diketo-L-gulonate TRAP transporter large permease protein yiaN 4632 180 ATCC 8739 alignment trimmed tree collapsed 1.590 0.852
1659 160 2,3-diketo-L-gulonate-binding periplasmic protein yiaO precursor 4631 182 KO11 alignment trimmed tree collapsed 0.034 0.929
1660 160 L-xylulose/3-keto-L-gulonate kinase (EC 2.7.1.-) 3 1827-70 alignment trimmed tree collapsed 0.049 0.715
1661 160 3-keto-L-gulonate 6-phosphate decarboxylase homolog 894 4864 232 O111:H- str. 11128 alignment trimmed tree collapsed 0.033 0.353
1662 160 L-xylulose 5-phosphate 3-epimerase (EC 5.1.3.-) homolog 895 2215 4863 228 55989 alignment trimmed tree collapsed 0.014 0.690
1663 160 L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) 896 5617 1570 2216 4862 366 H591 alignment trimmed tree collapsed 0.632 0.192
1664 160 Putative outer membrane protein yiaT precursor 3851 2217 4832 226 B7A alignment trimmed tree collapsed 1.335 1.165
1665 160 Putative transcriptional regulator LYSR-type 2218 97 E24377A alignment trimmed tree collapsed 0.007 0.480
1666 160 Putative transcriptional regulator LYSR-type 2218 97 MS 119-7 alignment trimmed tree collapsed 0.012 0.370
1667 160 Multidrug resistance protein A 1469 2219 4160 226 MS 145-7 alignment trimmed tree collapsed 0.005 1.196
1668 160 GTPase (EC 3.6.1.-) 2220 202 IAI39 alignment trimmed tree collapsed 0.000 0.719
1669 160 FIG00638635: hypothetical protein 2221 85 M718 alignment trimmed tree collapsed 0.160 0.561
1670 160 Aldehyde dehydrogenase (EC 1.2.1.3) 3069 4154 382 2222 3618 261 UTI89 alignment trimmed tree collapsed 1.559 0.324
1671 160 Alcohol dehydrogenase (EC 1.1.1.1) 4559 2223 3377 4322 455 W alignment trimmed tree collapsed 1.667 0.520
1672 160 Selenocysteine-specific translation elongation factor 2825 134 ATCC 8739 alignment trimmed tree collapsed 0.024 0.963
1673 160 L-seryl-tRNA(Sec) selenium transferase (EC 2.9.1.1) 2826 133 SMS-3-5 alignment trimmed tree collapsed 0.000 0.753
1674 160 Uncharacterized GST-like protein yibF 131 B7A alignment trimmed tree collapsed 0.006 0.554
1675 160 hypothetical protein 81 MS 78-1 alignment trimmed tree collapsed 0.025 0.486
1676 160 core protein 1354 4201 5049 5525 4179 407 BL21(DE3) alignment trimmed tree collapsed 0.265 3.315
1677 160 core protein 104 55989 alignment trimmed tree collapsed 0.019 0.543
1678 160 orf, hypothetical protein 57 K12 alignment trimmed tree collapsed 0.009 2.021
1679 160 Insertion element IS1 protein insB 105 655 727 2111 2317 2676 3197 4478 4596 4640 4980 5064 5201 922 E110019 alignment trimmed tree collapsed 0.000 0.401
1680 160 COG1662: Transposase and inactivated derivatives, IS1 family 1
1681 160 hypothetical protein 654 2675 4639 10 H299 alignment trimmed tree collapsed 0.176 0.676
1682 160 core protein 65 MS 107-1 alignment trimmed tree collapsed 0.030 1.022
1683 160 FIG00641094: hypothetical protein 3244 17 MS 107-1 alignment trimmed tree collapsed 0.000 0.262
1684 161 LysR-family transcriptional regulator YhaJ 3590 3715 5465 1285 1861 3951 4889 676 O127:H6 str. E2348/69 alignment trimmed tree collapsed 2.449 0.184
1685 161 Pirin-like protein YhaK 2023 1744 3952 266 MS 107-1 alignment trimmed tree collapsed 1.514 1.560
1686 161 Uncharacterized protein YhaL 3953 132 HS alignment trimmed tree collapsed 0.036 2.170
1687 161 Putative inner membrane protein 130 55989 alignment trimmed tree collapsed 0.007 0.076
1688 161 Serine transporter 3955 120 str. K-12 substr. MG1655 alignment trimmed tree collapsed 0.000 0.916
1689 161 Predicted L-serine dehydratase (EC 4.3.1.17) TdcG 2693 3891 1356 3814 3956 444 FVEC1412 alignment trimmed tree collapsed 0.411 1.015
1690 161 Hypothetical protein TdcF in cluster with anaerobic degradation of L-threonine to propionate 947 951 4619 1794 1798 2305 3957 496 CFT073 alignment trimmed tree collapsed 1.530 0.957
1691 161 2-ketobutyrate formate-lyase (EC 2.3.1.-) / Pyruvate formate-lyase (EC 2.3.1.54) 4753 763 3958 258 str. K-12 substr. DH10B alignment trimmed tree collapsed 0.242 0.587
1692 161 Propionate kinase (EC 2.7.2.15) / Acetate kinase (EC 2.7.2.1) 3376 1789 3959 256 55989 alignment trimmed tree collapsed 1.110 0.636
1693 161 L-threonine transporter, anaerobically inducible 1688 2692 2743 3815 3955 3960 509 UTI89 alignment trimmed tree collapsed 0.000 0.676
1694 161 Threonine dehydratase, catabolic (EC 4.3.1.19) 3961 131 MS 200-1 alignment trimmed tree collapsed 0.000 0.287
1695 161 Threonine catabolic operon transcriptional activator TdcA 1333 3962 239 B088 alignment trimmed tree collapsed 2.110 0.861
1696 161 Threonine catabolic operon transcriptional activator TdcA 1384 1827 2212 2705 2817 2823 2965 3536 3641 3715 4093 4105 4161 5209 5351 5465 5493 18 200 782 1123 1333 1427 1861 2190 2366 2605 3526 3803 3962 4133 4342 4442 4889 2831 DH1 alignment trimmed tree collapsed 1.720 0.225
1697 161 Threonine catabolic operon transcriptional activator TdcR 3963 128 SE11 alignment trimmed tree collapsed 0.063 0.267
1698 161 orf, hypothetical protein 3965 102 B171 alignment trimmed tree collapsed 0.017 1.002
1699 161 FIG00638045: hypothetical protein 84 55989 alignment trimmed tree collapsed 0.152 1.417
1700 161 Transposase 946 2332 2580 3418 4780 5370 4816 262 TA271 alignment trimmed tree collapsed 0.210 6.996
1701 161 Transposase 2580 3418 4780 5370 4816 248 IAI1 alignment trimmed tree collapsed 0.004 0.235
1702 161 hypothetical protein 43 SE11 alignment trimmed tree collapsed 0.000 0.483
1703 161 Glycerate kinase (EC 2.7.1.31) 5219 741 1690 275 E24377A alignment trimmed tree collapsed 0.016 0.239
1704 161 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) 2606 5214 668 742 3205 499 O157:H7 str. EC4042 alignment trimmed tree collapsed 1.214 1.390
1705 161 2-dehydro-3-deoxyglucarate aldolase (EC 4.1.2.20) 743 269 UTI89 alignment trimmed tree collapsed 1.161 1.004
1706 161 D-galactarate permease 771 993 1578 2681 3321 66 700 744 3576 3823 710 O157:H7 str. EC508 alignment trimmed tree collapsed 0.000 0.932
1707 161 FIG00642497: hypothetical protein 1 H736
1708 161 D-galactarate dehydratase (EC 4.2.1.42) 746 128 MS 107-1 alignment trimmed tree collapsed 0.010 0.558
1709 161 HtrA suppressor protein 747 121 OP50 alignment trimmed tree collapsed 0.022 0.575
1710 161 Uncharacterized protein yhaV 748 112 IAI1 alignment trimmed tree collapsed 0.021 0.682
1711 161 Transcriptional repressor of aga operon 675 888 1285 2003 2569 2605 2702 3838 4045 80 296 666 749 1130 2961 3206 3806 4389 4620 1128 O157:H7 alignment trimmed tree collapsed 2.524 1.040
1712 161 Tagatose-6-phosphate kinase AgaZ (EC 2.7.1.144) 750 2747 252 55989 alignment trimmed tree collapsed 0.014 0.990
1713 161 PTS system, N-acetylgalactosamine-specific IIB component (EC 2.7.1.69) 1720 3895 751 758 1359 495 042 alignment trimmed tree collapsed 0.884 0.615
1714 161 PTS system, N-acetylgalactosamine-specific IIC component (EC 2.7.1.69) 1721 752 759 235 FVEC1302 alignment trimmed tree collapsed 1.291 0.491
1715 161 PTS system, N-acetylgalactosamine-specific IID component (EC 2.7.1.69) 753 126 FVEC1412 alignment trimmed tree collapsed 0.000 0.101
1716 161 PTS system, N-acetylgalactosamine- and galactosamine-specific IIA component (EC 2.7.1.69) 3895 5689 754 1359 4913 390 MS 116-1 alignment trimmed tree collapsed 0.008 1.427
1717 161 N-acetylgalactosamine-6-phosphate deacetylase (EC 3.5.1.25) 5023 755 4020 254 M718 alignment trimmed tree collapsed 1.417 0.742
1718 161 Predicted galactosamine-6-phosphate isomerase (EC 5.3.1.-) 756 160 55989 alignment trimmed tree collapsed 0.016 0.461
1719 161 Tagatose-1,6-bisphosphate aldolase AgaY (EC 4.1.2.-) 2450 3841 293 757 2748 3325 653 55989 alignment trimmed tree collapsed 1.988 1.136
1720 161 PTS system, galactosamine-specific IIB component (EC 2.7.1.69) 1713 3895 751 758 1359 495 MS 107-1 alignment trimmed tree collapsed 0.013 0.181
1721 161 PTS system, galactosamine-specific IIC component (EC 2.7.1.69) 1714 752 759 297 E2348/69 alignment trimmed tree collapsed 1.933 0.013
1722 161 PTS system, galactosamine-specific IID component (EC 2.7.1.69) 1715 753 760 1361 472 042 alignment trimmed tree collapsed 0.998 0.416
1723 161 Galactosamine-6-phosphate isomerase (galactosamine-6-phosphate deaminase) (EC 5.3.1.-) 761 132 SE11 alignment trimmed tree collapsed 0.001 0.412
1724 161 Galactosamine-6-phosphate isomerase (galactosamine-6-phosphate deaminase) (EC 5.3.1.-) 5024 761 3350 4021 351 MS 182-1 alignment trimmed tree collapsed 1.467 1.420
1725 161 Putative fimbrial-like protein 1621 2195 4255 4933 172 1599 2127 2149 3365 733 KO11 alignment trimmed tree collapsed 2.612 0.040
1726 161 Chaperone protein fimC precursor 1620 2194 2198 4257 4796 4802 5237 171 235 1601 2150 3364 4211 4317 4744 1048 SE11 alignment trimmed tree collapsed 2.431 0.305
1727 161 Hypothetical outer membrane usher protein yraJ precursor 2193 4256 5238 170 236 592 1600 3363 3663 4743 861 55989 alignment trimmed tree collapsed 1.631 0.184
1728 161 FIG085450: fimbrial protein 169 3362 3662 156 MS 124-1 alignment trimmed tree collapsed 0.024 0.562
1729 161 rRNA small subunit methyltransferase I 168 133 EC4100B alignment trimmed tree collapsed 0.008 0.942
1730 161 LppC putative lipoprotein 167 123 H591 alignment trimmed tree collapsed 0.020 0.769
1731 161 Predicted endonuclease distantly related to archaeal Holliday junction resolvase 166 126 TA143 alignment trimmed tree collapsed 0.023 0.694
1732 161 Phosphoheptose isomerase (EC 5.3.1.-) 165 130 W alignment trimmed tree collapsed 0.000 0.985
1733 161 21 kDa hemolysin precursor 791 164 1958 266 H591 alignment trimmed tree collapsed 1.422 0.133
1734 161 FIG006303: protein yraQ 163 131 55989 alignment trimmed tree collapsed 0.007 0.234
1735 161 Oxidoreductase (EC 1.1.1.-) 162 129 O26:H11 str. 11368 alignment trimmed tree collapsed 0.006 0.012
1736 161 General stress protein 18 5110 161 996 267 O157:H7 alignment trimmed tree collapsed 0.000 0.157
1737 161 UPF0306 protein yhbP 160 132 55989 alignment trimmed tree collapsed 0.028 0.950
1738 161 FIG137864: putative endonuclease containing a URI domain 159 129 E110019 alignment trimmed tree collapsed 0.022 1.283
1739 161 FIG002208: Acetyltransferase (EC 2.3.1.-) 158 134 ABU 83972 alignment trimmed tree collapsed 0.000 0.154
1740 161 FIG138517: Putative lipid carrier protein 157 133 55989 alignment trimmed tree collapsed 0.018 1.486
1741 161 hypothetical protein 6 1125A alignment trimmed tree 0.000 0.000
1742 161 FIG139552: Putative protease 156 132 O157:H7 str. TW14588 alignment trimmed tree collapsed 0.000 0.099
1743 161 FIG139928: Putative protease 155 132 55989 alignment trimmed tree collapsed 0.018 2.813
1744 161 Luciferase-like monooxygenase (EC 1.14.-.-) 1
1745 161 Luciferase-like monooxygenase (EC 1.14.-.-) 2499 134 IAI39 alignment trimmed tree collapsed 0.000 0.449
1746 161 Tryptophan-specific transport protein 2500 256 53638 alignment trimmed tree collapsed 0.011 0.789
1747 161 Cold-shock DEAD-box protein A 2501 133 MS 21-1 alignment trimmed tree collapsed 0.002 0.747
1748 161 Lipoprotein nlpI precursor 2502 133 55989 alignment trimmed tree collapsed 0.004 2.409
1749 161 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) 2503 132 B171 alignment trimmed tree collapsed 0.000 0.936
1750 161 SSU ribosomal protein S15p (S13e) 2504 134 HS alignment trimmed tree collapsed 0.011 0.479
1751 161 tRNA pseudouridine synthase B (EC 4.2.1.70) ## tRNA Psi55 2505 134 EC4100B alignment trimmed tree collapsed 0.004 1.694
1752 161 Ribosome-binding factor A 2506 133 B185 alignment trimmed tree collapsed 0.000 0.096
1753 161 Translation initiation factor 2 2507 131 ATCC 8739 alignment trimmed tree collapsed 0.000 0.582
1754 161 Transcription termination protein NusA 2508 129 E110019 alignment trimmed tree collapsed 0.000 0.505
1755 161 COG0779: clustered with transcription termination protein NusA 2509 134 W alignment trimmed tree collapsed 0.000 0.087
1756 161 orf, partial conserved hypothetical protein 2756 20 CFT073 alignment trimmed tree collapsed 0.027 0.471
1757 161 Argininosuccinate synthase (EC 6.3.4.5) 2757 127 MS 145-7 alignment trimmed tree collapsed 0.003 1.083
1758 161 Outer-membrane protein yhbX precursor 2758 127 55989 alignment trimmed tree collapsed 0.008 0.219
1759 161 Preprotein translocase subunit SecG (TC 3.A.5.1.1) 2759 135 042 alignment trimmed tree collapsed 0.000 0.306
1760 161 Phosphoglucosamine mutase (EC 5.4.2.10) 2760 2850 301 55989 alignment trimmed tree collapsed 2.096 0.218
1761 161 Dihydropteroate synthase (EC 2.5.1.15) 1540 2761 139 str. K-12 substr. DH10B alignment trimmed tree collapsed 0.000 0.265
1762 161 Cell division protein FtsH (EC 3.4.24.-) 2762 120 DH1 alignment trimmed tree collapsed 0.000 0.483
1763 161 Cell division protein FtsJ / Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.-) ## LSU rRNA Um2552 2763 124 S88 alignment trimmed tree collapsed 0.011 8.964
1764 161 FIG004454: RNA binding protein 2764 125 BL21 alignment trimmed tree 0.000 0.000
1765 161 Transcription elongation factor GreA 1981 1454 2765 254 DH1 alignment trimmed tree collapsed 1.384 1.014
1766 161 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) 2766 117 O103:H2 str. 12009 alignment trimmed tree collapsed 0.008 0.580
1767 161 COG0536: GTP-binding protein Obg 2767 121 O157:H7 str. TW14588 alignment trimmed tree collapsed 0.003 0.434
1768 161 Permease of the drug/metabolite transporter (DMT) superfamily 124 W alignment trimmed tree 0.000 0.000
1769 161 Permease of the drug/metabolite transporter (DMT) superfamily 119 W3110 alignment trimmed tree collapsed 0.001 0.294
1770 161 LSU ribosomal protein L27p 2770 128 MS 84-1 alignment trimmed tree collapsed 0.000 0.145
1771 161 LSU ribosomal protein L21p 2771 125 042 alignment trimmed tree collapsed 0.000 0.090
1772 161 Octaprenyl-diphosphate synthase (EC 2.5.1.-) 2772 132 str. K-12 substr. DH10B alignment trimmed tree collapsed 0.000 0.843
1773 161 Ner-like regulatory protein 2773 130 O157:H7 str. EC4024 alignment trimmed tree collapsed 0.000 0.166
1774 161 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) 130 WV_060327 alignment trimmed tree collapsed 0.003 0.494
1775 161 UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC 2.5.1.7) 133 WV_060327 alignment trimmed tree collapsed 0.034 5.705
1776 161 YrbA protein 861 133 042 alignment trimmed tree collapsed 0.000 0.169
1777 161 Uncharacterized protein YrbB 862 133 O157:H7 EDL933 alignment trimmed tree collapsed 0.000 0.574
1778 161 Uncharacterized ABC transporter, auxiliary component YrbC 863 134 str. K-12 substr. DH10B alignment trimmed tree collapsed 0.006 0.264
1779 161 Uncharacterized ABC transporter, periplasmic component YrbD 864 134 E110019 alignment trimmed tree collapsed 0.006 2.062
1780 161 Uncharacterized ABC transporter, permease component YrbE 865 133 DH1 alignment trimmed tree collapsed 0.000 0.124
1781 161 Uncharacterized ABC transporter, ATP-binding protein YrbF 4902 5279 5555 5718 866 917 1815 2082 2929 4790 799 O157:H7 EDL933 alignment trimmed tree collapsed 2.421 0.123
1782 161 Inner membrane protein YrbG, predicted calcium/sodium:proton antiporter 867 131 55989 alignment trimmed tree collapsed 0.007 2.329
1783 161 Arabinose 5-phosphate isomerase (EC 5.3.1.13) 2570 868 261 APEC O1 alignment trimmed tree collapsed 0.921 1.085
1784 161 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) 869 134 B171 alignment trimmed tree collapsed 0.000 0.286
1785 161 Uncharacterized protein YrbK clustered with lipopolysaccharide transporters 870 131 TA143 alignment trimmed tree collapsed 0.005 0.372
1786 161 LptA, protein essential for LPS transport across the periplasm 871 130 042 alignment trimmed tree collapsed 0.000 0.178
1787 161 Lipopolysaccharide ABC transporter, ATP-binding protein LptB 926 1150 1461 1857 2032 2037 2038 2071 2837 3086 3203 3448 3949 4082 4183 4231 4453 4701 4919 5003 5279 5380 5476 5555 5687 5718 4 92 210 283 623 835 872 1438 1710 1815 1834 1869 1899 1900 1905 2082 2517 2530 2697 2709 2929 2977 3838 4472 4758 4790 4843 4911 3831 55989 alignment trimmed tree collapsed 2.239 0.055
1788 161 RNA polymerase sigma-54 factor RpoN 873 130 O157:H7 str. EC508 alignment trimmed tree collapsed 0.000 0.506
1789 161 Ribosome hibernation protein YhbH 3024 874 4097 267 OP50 alignment trimmed tree collapsed 0.000 0.872
1790 161 PTS system nitrogen-specific IIA component, PtsN 667 4945 875 2055 3714 269 042 alignment trimmed tree collapsed 0.006 0.936
1791 161 hypothetical protein 876 134 K12 alignment trimmed tree collapsed 0.000 0.175
1792 161 Phosphocarrier protein, nitrogen regulation associated 2831 3247 4513 10 516 877 3982 582 F11 alignment trimmed tree collapsed 2.499 0.785
1793 161 hypothetical protein 3 042 alignment trimmed tree 0.000 0.000
1794 161 Putative uncharacterized protein YrbL 878 130 E110019 alignment trimmed tree collapsed 0.005 0.126
1795 161 Monofunctional biosynthetic peptidoglycan transglycosylase (EC 2.4.2.-) 879 131 55989 alignment trimmed tree collapsed 0.004 0.138
1796 161 Sigma cross-reacting protein 27A 880 130 MS 124-1 alignment trimmed tree collapsed 0.010 0.155
1797 161 Aerobic respiration control sensor protein arcB (EC 2.7.3.-) 881 130 str. K-12 substr. DH10B alignment trimmed tree collapsed 0.004 0.163
1798 161 COG1242: Predicted Fe-S oxidoreductase 882 133 IAI1 alignment trimmed tree collapsed 0.007 0.921
1799 161 FIG00638457: hypothetical protein 883 48 H591 alignment trimmed tree collapsed 0.212 0.878
1800 161 Glutamate synthase [NADPH] large chain (EC 1.4.1.13) 884 117 55989 alignment trimmed tree collapsed 0.004 1.256
1801 161 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) 2879 885 4413 266 W alignment trimmed tree collapsed 0.480 0.545
1802 161 hypothetical protein 13 MS 69-1 alignment trimmed tree collapsed 0.022 0.791
1803 161 IS, phage, Tn; Transposon-related functions 2 MS 187-1 alignment trimmed
1804 161 Putative sugar isomerase involved in processing of exogenous sialic acid 955 1656 888 1791 4634 391 83972 alignment trimmed tree collapsed 1.853 0.885
1805 161 N-acetylmannosamine kinase (EC 2.7.1.60) 889 134 B str. REL606 alignment trimmed tree collapsed 0.019 0.326
1806 161 N-acetylmannosamine kinase (EC 2.7.1.60) 1
1807 161 N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9) 660 890 3721 140 042 alignment trimmed tree collapsed 0.000 0.261
1808 161 Sialic acid transporter (permease) NanT 891 141 B7A alignment trimmed tree collapsed 0.000 0.338
1809 161 N-acetylneuraminate lyase (EC 4.1.3.3) 892 158 O157:H7 str. EC4042 alignment trimmed tree collapsed 0.510 0.358
1810 161 Transcriptional regulator NanR 893 143 B7A alignment trimmed tree collapsed 0.030 0.295
1811 161 Putative cryptic C4-dicarboxylate transporter DcuD 5315 4701 205 55989 alignment trimmed tree collapsed 1.362 1.215
1812 161 ClpXP protease specificity-enhancing factor / Stringent starvation protein B 26 536 alignment trimmed tree 0.000 0.000
1813 161 Stringent starvation protein A 896 165 W alignment trimmed tree collapsed 0.000 0.500
1814 161 SSU ribosomal protein S9p (S16e) 897 132 IAI39 alignment trimmed tree 0.000 0.000
1815 161 LSU ribosomal protein L13p (L13Ae) 898 130 APEC O1 alignment trimmed tree 0.000 0.000
1816 161 ATPase, AFG1 family 899 126 EC4100B alignment trimmed tree collapsed 0.016 1.004
1817 161 Putative cytochrome d ubiquinol oxidase subunit III (EC 1.10.3.-) (Cytochrome bd-I oxidase subunit III) 900 133 ATCC 8739 alignment trimmed tree collapsed 0.000 0.253
1818 161 Outer membrane stress sensor protease DegQ, serine protease 901 125 042 alignment trimmed tree collapsed 0.000 0.758
1819 161 Outer membrane stress sensor protease DegS 902 131 E22 alignment trimmed tree collapsed 0.008 0.169
1820 161 Malate dehydrogenase (EC 1.1.1.37) 903 132 CFT073 alignment trimmed tree collapsed 0.004 0.969
1821 161 Arginine pathway regulatory protein ArgR, repressor of arg regulon 904 133 UMN026 alignment trimmed tree collapsed 0.000 0.560
1822 161 probable exported protein YPO3518 885 3651 4438 4911 4916 455 1133 1831 2361 3535 4927 786 H591 alignment trimmed tree collapsed 1.665 0.940
1823 161 probable ribonuclease inhibitor YPO3690 2362 131 SE11 alignment trimmed tree collapsed 0.012 0.402
1824 161 FUSARIC ACID RESISTANCE PROTEIN FUSB / FUSARIC ACID RESISTANCE PROTEIN FUSC 2363 126 E110019 alignment trimmed tree collapsed 0.004 1.105
1825 161 Fusaric acid resistance protein fusE 2364 169 MS 116-1 alignment trimmed tree collapsed 0.000 0.889
1826 161 probable membrane protein YPO3684 2365 129 536 alignment trimmed tree collapsed 0.012 0.846
1827 161 Putative transcriptional regulator LYSR-type 2153 2212 3875 4749 5493 618 766 1338 2366 4342 791 O157:H7 str. FRIK966 alignment trimmed tree collapsed 2.857 0.165
1828 161 TldD protein, part of proposed TldE/TldD proteolytic complex (PMID 12029038) 2367 128 O127:H6 str. E2348/69 alignment trimmed tree collapsed 0.000 0.548
1829 161 FIG005080: Possible exported protein 2368 129 55989 alignment trimmed tree collapsed 0.015 1.688
1830 161 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) 2369 131 O55:H7 str. CB9615 alignment trimmed tree collapsed 0.000 0.238
1831 161 Septum formation protein Maf 4410 1319 2370 247 O127:H6 str. E2348/69 alignment trimmed tree collapsed 1.272 1.038
1832 161 Rod shape-determining protein MreD 2371 128 O157:H7 str. EC4206 alignment trimmed tree collapsed 0.000 0.155
1833 161 Rod shape-determining protein MreC 2372 131 W alignment trimmed tree collapsed 0.009 0.883
1834 161 Rod shape-determining protein MreB 281 2373 218 E2348/69 alignment trimmed tree collapsed 1.963 0.791
1835 161 Putative lipoprotein 2374 120 SE11 alignment trimmed tree collapsed 0.014 0.407
1836 161 YhdH, a putative quinone oxidoreductase 2375 123 MS 107-1 alignment trimmed tree collapsed 0.003 0.869
1837 161 hypothetical protein 115 E110019 alignment trimmed tree collapsed 0.000 0.239
1838 161 hypothetical protein 2376 23 TA271 alignment trimmed tree collapsed 0.000 0.686
1839 161 Biotin carboxyl carrier protein of acetyl-CoA carboxylase 2377 126 B7A alignment trimmed tree collapsed 0.000 0.156
1840 161 Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) 2378 127 O111:H- str. 11128 alignment trimmed tree collapsed 0.000 11.225
1841 161 Biotin carboxylase of acetyl-CoA carboxylase (EC 6.3.4.14) 2378 127 W alignment trimmed tree collapsed 0.004 0.080
1842 161 FIG003021: Membrane protein 2379 133 CFT073 alignment trimmed tree collapsed 0.000 0.638
1843 161 Pantothenate:Na+ symporter (TC 2.A.21.1.1) 4628 2380 4612 253 O157:H7 str. EC4206 alignment trimmed tree collapsed 1.427 0.746
1844 161 Pantothenate:Na+ symporter (TC 2.A.21.1.1) 4628 2300 2380 4612 385 MS 84-1 alignment trimmed tree collapsed 2.050 0.680
1845 161 Ribosomal protein L11 methyltransferase (EC 2.1.1.-) 2381 128 55989 alignment trimmed tree collapsed 0.004 1.835
1846 161 tRNA dihydrouridine synthase B (EC 1.-.-.-) 972 133 FVEC1412 alignment trimmed tree collapsed 0.000 0.255
1847 161 DNA-binding protein Fis 971 133 WV_060327 alignment trimmed tree collapsed 0.000 11.489
1848 161 Adenine-specific methyltransferase (EC 2.1.1.72) 970 133 55989 alignment trimmed tree collapsed 0.028 0.135
1849 161 Putative periplasmic protein 969 128 O157:H7 str. TW14588 alignment trimmed tree collapsed 0.000 0.241
1850 161 Transcription repressor of multidrug efflux pump acrAB operon, TetR (AcrR) family 5158 959 968 248 55989 alignment trimmed tree collapsed 0.005 0.916
1851 161 RND efflux system, membrane fusion protein CmeA 5157 958 2523 246 F11 alignment trimmed tree collapsed 0.892 0.869
1852 161 RND efflux system, inner membrane transporter CmeB 2143 3158 5156 5263 268 957 2328 2522 3438 4416 961 KO11 alignment trimmed tree collapsed 0.611 0.800
1853 161 probable lipoprotein 132 O157:H7 str. EC508 alignment trimmed tree collapsed 0.000 0.190
1854 161 FIG00639805: hypothetical protein 2521 31 042 alignment trimmed tree collapsed 0.000 0.466
1855 161 Glutamate Aspartate periplasmic binding protein precursor GltI (TC 3.A.1.3.4) 2520 123 B185 alignment trimmed tree collapsed 0.000 0.953
1856 161 Glutamate Aspartate transport system permease protein GltJ (TC 3.A.1.3.4) 2519 128 FVEC1302 alignment trimmed tree collapsed 0.003 0.688
1857 161 Glutamate Aspartate transport system permease protein GltK (TC 3.A.1.3.4) 1
1858 161 FIG00641387: hypothetical protein 42 TA280 alignment trimmed tree collapsed 0.050 0.803
1859 161 carbonic anhydrase, family 3 4142 5593 1066 1594 3628 325 O157:H7 alignment trimmed tree collapsed 1.531 0.999
1860 161 FIG034389 (not subsystem-based): hypothetical protein 56 MS 124-1 alignment trimmed tree collapsed 0.000 0.602
1861 161 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 3750 1064 3554 265 KO11 alignment trimmed tree collapsed 0.019 1.101
1862 161 COG0009 YrdC subfamily, required for N6-threonylcarbamoyl adenosine t(6)A37 modification in tRNA 1063 133 B7A alignment trimmed tree collapsed 0.006 0.933
1863 161 Similar to C-terminal Zn-finger domain of DNA topoisomerase I 107 H591 alignment trimmed tree collapsed 0.000 0.149
1864 161 Protein of unknown function Smg 1061 135 O157:H7 str. EC4115 alignment trimmed tree collapsed 0.000 0.465
1865 161 Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake 1060 128 B7A alignment trimmed tree collapsed 0.033 1.282
1866 161 Peptide deformylase (EC 3.5.1.88) 1059 140 MS 115-1 alignment trimmed tree collapsed 0.000 0.372
1867 161 Methionyl-tRNA formyltransferase (EC 2.1.2.9) 3333 1058 4060 266 TA271 alignment trimmed tree collapsed 0.001 0.703
1868 161 Methionyl-tRNA formyltransferase (EC 2.1.2.9) 3333 1058 4060 265 SE11 alignment trimmed tree collapsed 0.006 0.811
1869 161 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) 1057 130 E24377A alignment trimmed tree collapsed 0.019 1.101
1870 161 Trk system potassium uptake protein TrkA 1056 134 MS 200-1 alignment trimmed tree collapsed 0.000 0.175
1871 161 Large-conductance mechanosensitive channel 1055 132 SE11 alignment trimmed tree collapsed 0.008 1.754
1872 161 HTH-type transcriptional regulator zntR 147 5186 1054 3082 3234 282 B088 alignment trimmed tree collapsed 0.000 0.336
1873 161 Putative cytoplasmic protein 1053 133 H591 alignment trimmed tree collapsed 0.026 0.145
1874 161 LSU ribosomal protein L17p 1052 133 O157:H7 str. EC4115 alignment trimmed tree collapsed 0.000 0.217
1875 161 DNA-directed RNA polymerase alpha subunit (EC 2.7.7.6) 1051 131 UMN026 alignment trimmed tree collapsed 0.000 0.177
1876 161 SSU ribosomal protein S4p (S9e) 1050 131 ATCC 8739 alignment trimmed tree collapsed 0.000 0.411
1877 161 SSU ribosomal protein S11p (S14e) 1049 133 O157:H7 str. EC4486 alignment trimmed tree collapsed 0.000 0.087
1878 161 SSU ribosomal protein S13p (S18e) 1048 134 1044A alignment trimmed tree collapsed 0.000 0.087
1879 161 LSU ribosomal protein L36p 1047 131 O157:H7 str. EC4206 alignment trimmed tree 0.000 0.000
1880 161 Preprotein translocase secY subunit (TC 3.A.5.1.1) 127 MS 182-1 alignment trimmed tree collapsed 0.000 0.089
1881 161 LSU ribosomal protein L15p (L27Ae) 1045 127 TA280 alignment trimmed tree collapsed 0.000 0.445
1882 161 LSU ribosomal protein L30p (L7e) 1044 129 EC4100B alignment trimmed tree collapsed 0.000 0.088
1883 161 SSU ribosomal protein S5p (S2e) 1043 126 APEC O1 alignment trimmed tree collapsed 0.000 0.191
1884 161 LSU ribosomal protein L18p (L5e) 1042 125 WV_060327 alignment trimmed tree 0.000 0.000
1885 161 LSU ribosomal protein L6p (L9e) 1041 128 ABU 83972 alignment trimmed tree collapsed 0.000 0.155
1886 161 SSU ribosomal protein S8p (S15Ae) 1040 131 MS 107-1 alignment trimmed tree collapsed 0.000 0.125
1887 161 SSU ribosomal protein S14p (S29e) ## Zinc-independent 1039 132 E24377A alignment trimmed tree collapsed 0.000 0.134
1888 161 LSU ribosomal protein L5p (L11e) 1038 130 B185 alignment trimmed tree collapsed 0.000 0.088
1889 161 LSU ribosomal protein L24p (L26e) 1037 132 53638 alignment trimmed tree collapsed 0.000 0.543
1890 161 LSU ribosomal protein L14p (L23e) 1036 131 O157:H7 EDL933 alignment trimmed tree collapsed 0.000 0.125
1891 161 SSU ribosomal protein S17p (S11e) 1035 131 BL21 alignment trimmed tree 0.000 0.000
1892 161 LSU ribosomal protein L29p (L35e) 1034 128 E22 alignment trimmed tree 0.000 0.000
1893 161 LSU ribosomal protein L16p (L10e) 1033 126 TA280 alignment trimmed tree collapsed 0.000 0.127
1894 161 SSU ribosomal protein S3p (S3e) 1032 119 O157:H7 str. FRIK2000 alignment trimmed tree collapsed 0.000 6.255
1895 161 LSU ribosomal protein L22p (L17e) 119 MS 200-1 alignment trimmed tree collapsed 0.000 0.131
1896 161 SSU ribosomal protein S19p (S15e) 1086 120 K12 alignment trimmed tree collapsed 0.000 0.092
1897 161 LSU ribosomal protein L2p (L8e) 118 O157:H7 EDL933 alignment trimmed tree collapsed 0.000 0.131
1898 161 LSU ribosomal protein L23p (L23Ae) 3482 121 O127:H6 str. E2348/69 alignment trimmed tree collapsed 0.000 0.091
1899 161 LSU ribosomal protein L4p (L1e) 3481 120 O157:H7 str. EC4045 alignment trimmed tree collapsed 0.000 0.092
1900 161 LSU ribosomal protein L3p (L3e) 3480 119 UM146 alignment trimmed tree collapsed 0.000 0.164
1901 161 SSU ribosomal protein S10p (S20e) 3479 121 str. K-12 substr. DH10B alignment trimmed tree collapsed 0.000 4.591
1902 161 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) 3478 120 E24377A alignment trimmed tree collapsed 1.487 0.430
1903 161 Bacterioferritin 3477 112 KO11 alignment trimmed tree collapsed 0.000 1.324
1904 161 Bacterioferritin-associated ferredoxin 3476 117 MS 69-1 alignment trimmed tree collapsed 0.138 0.935
1905 161 Translation elongation factor Tu 1007 1672 2825 298 UTI89 alignment trimmed tree collapsed 0.000 0.881
1906 161 Translation elongation factor G 4491 118 55989 alignment trimmed tree collapsed 0.000 0.328
1907 161 SSU ribosomal protein S7p (S5e) 4492 122 str. K-12 substr. DH10B alignment trimmed tree collapsed 0.000 0.129
1908 161 SSU ribosomal protein S12p (S23e) 4493 121 APEC O1 alignment trimmed tree collapsed 0.000 0.282
1909 161 tRNA 5-methylaminomethyl-2-thiouridine synthase TusB 4494 120 O157:H7 EDL933 alignment trimmed tree collapsed 0.011 0.977
1910 161 tRNA 5-methylaminomethyl-2-thiouridine synthase TusC 4495 122 KO11 alignment trimmed tree collapsed 0.009 0.482
1911 161 tRNA 5-methylaminomethyl-2-thiouridine synthase TusD 4496 126 MS 145-7 alignment trimmed tree collapsed 0.099 1.648
1912 161 YheO-like PAS domain 4497 121 TA271 alignment trimmed tree collapsed 0.013 0.076
1913 161 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA precursor (EC 5.2.1.8) 4498 122 ED1a alignment trimmed tree collapsed 0.001 0.324
1914 161 Protein slyX 4499 131 FVEC1302 alignment trimmed tree collapsed 0.015 0.487
1915 161 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) 0
1916 161 Putative cytoplasmic protein ,probably associated with Glutathione-regulated potassium-efflux 4501 128 O157:H7 str. EC4042 alignment trimmed tree collapsed 0.000 0.222
1917 161 Glutathione-regulated potassium-efflux system protein KefB 5605 1582 4502 249 042 alignment trimmed tree collapsed 0.978 0.908
1918 161 Glutathione-regulated potassium-efflux system ancillary protein KefG 1583 4503 208 OP50 alignment trimmed tree collapsed 0.000 0.789
1919 161 Glutathione-regulated potassium-efflux system ATP-binding protein 4807 4312 4504 256 536 alignment trimmed tree collapsed 0.000 1.132
1920 161 Hydrolase, alpha/beta fold family functionally coupled to Phosphoribulokinase 4505 133 TA271 alignment trimmed tree collapsed 0.009 0.071
1921 161 hypothetical protein 4506 134 IAI1 alignment trimmed tree collapsed 0.000 0.235
1922 161 Phosphoribulokinase (EC 2.7.1.19) homolog, function unknown 4507 134 B185 alignment trimmed tree collapsed 0.007 0.841
1923 161 OsmC/Ohr family protein 4508 131 H591 alignment trimmed tree collapsed 0.000 0.273
1924 161 Cyclic AMP receptor protein 1236 134 O55:H7 str. CB9615 alignment trimmed tree collapsed 0.000 0.235
1925 161 hypothetical protein 1237 191 W alignment trimmed tree collapsed 0.006 0.670
1926 161 hypothetical protein 1237 133 E24377A alignment trimmed tree collapsed 0.001 0.397
1927 161 Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) 3070 383 938 1235 1238 499 H591 alignment trimmed tree collapsed 0.010 1.123
1928 161 Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) 2929 4020 1239 1652 398 MS 115-1 alignment trimmed tree collapsed 1.071 0.963
1929 161 Cell filamentation protein fic 1240 130 MS 119-7 alignment trimmed tree collapsed 0.000 0.621
1930 161 Peptidyl-prolyl cis-trans isomerase ppiA precursor (EC 5.2.1.8) 1242 131 O157:H7 str. EC869 alignment trimmed tree collapsed 0.006 0.149
1931 161 hypothetical protein 1243 57 MS 146-1 alignment trimmed tree collapsed 0.000 0.281
1932 161 TsgA protein homolog 1244 130 KO11 alignment trimmed tree collapsed 0.006 0.131
1933 161 TsgA protein homolog 1244 136 str. K-12 substr. DH10B alignment trimmed tree collapsed 0.000 0.126
1934 161 Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) 1245 133 O157:H7 str. TW14588 alignment trimmed tree collapsed 0.000 0.634
1935 161 Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4) 1246 134 55989 alignment trimmed tree collapsed 0.019 1.419
1936 161 Nitrite transporter NirC 1247 131 W3110 alignment trimmed tree collapsed 0.000 0.512
1937 161 Siroheme synthase / Precorrin-2 oxidase (EC 1.3.1.76) / Sirohydrochlorin ferrochelatase (EC 4.99.1.4) / Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) 1248 128 H591 alignment trimmed tree collapsed 0.000 0.759
1938 161 putative outer membrane lipoprotein 1249 132 FVEC1302 alignment trimmed tree collapsed 0.000 0.177
1939 161 Fructoselysine transporter FrlA, cationic amino acid permease 3589 1250 1284 216 O26:H11 str. 11368 alignment trimmed tree collapsed 1.923 0.621
1940 161 Fructoselysine 6-phosphate deglycase (EC 3.5.-.-) 1251 87 B str. REL606 alignment trimmed tree collapsed 0.009 0.848
1941 161 Fructoselysine 3-epimerase 1252 88 E24377A alignment trimmed tree collapsed 0.005 0.115
1942 161 Fructoselysine kinase (EC 2.7.1.-) 2160 3840 294 351 1253 306 IAI1 alignment trimmed tree collapsed 0.008 1.198
1943 161 Transcriptional regulator of fructoselysine utilization operon FrlR 1147 1282 3182 4293 663 692 1254 1524 2269 2862 666 IAI1 alignment trimmed tree collapsed 2.231 0.611
1944 161 Aspartate aminotransferase family 1488 101 55989 alignment trimmed tree collapsed 0.017 0.770
1945 161 FIG006427: Putative transport system permease protein 1487 106 MS 116-1 alignment trimmed tree collapsed 0.005 1.122
1946 161 FIG128630: Hypothetical protein 1486 106 HS alignment trimmed tree collapsed 0.009 0.192
1947 161 Phosphotriesterase like protein 3547 1485 2153 147 MS 145-7 alignment trimmed tree collapsed 1.450 0.622
1948 161 Phosphopentomutase like (EC 5.4.2.7) 800 1484 1949 235 55989 alignment trimmed tree collapsed 0.036 1.090
1949 161 Protein containing an Alanine Racemase Domain 1483 106 55989 alignment trimmed tree collapsed 0.066 1.171
1950 161 Protein containing an Alanine Racemase Domain 1483 107 O103:H2 str. 12009 alignment trimmed tree collapsed 0.078 5.745
1951 161 Protein containing PTS-regulatory domain 1482 106 53638 alignment trimmed tree collapsed 0.000 0.669
1952 161 Hypothetical protein YhfZ 1481 104 55989 alignment trimmed tree collapsed 0.014 1.289
1953 161 Tryptophanyl-tRNA synthetase (EC 6.1.1.2) ## proteobacterial type 133 IAI1 alignment trimmed tree collapsed 0.003 1.153
1954 161 Phosphoglycolate phosphatase (EC 3.1.3.18) 2 1827-70 alignment trimmed
1955 161 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) 1478 229 536 alignment trimmed tree collapsed 1.492 0.701
1956 161 Methyl-directed repair DNA adenine methylase (EC 2.1.1.72) 1477 172 W3110 alignment trimmed tree collapsed 0.004 0.588
1957 161 DamX, an inner membrane protein involved in bile resistance 1476 131 55989 alignment trimmed tree collapsed 0.009 0.486
1958 161 3-dehydroquinate synthase (EC 4.2.3.4) 1475 131 ED1a alignment trimmed tree collapsed 0.000 0.736
1959 161 Shikimate kinase I (EC 2.7.1.71) 1474 114 042 alignment trimmed tree collapsed 0.000 0.534
1960 161 Type IV pilus biogenesis protein PilQ 1473 134 1044A alignment trimmed tree collapsed 0.021 0.303
1961 161 Type IV pilus biogenesis protein PilP 1472 129 O55:H7 str. CB9615 alignment trimmed tree collapsed 0.008 0.961
1962 161 Type IV pilus biogenesis protein PilO 1471 122 IAI1 alignment trimmed tree collapsed 0.008 1.031
1963 161 Type IV pilus biogenesis protein PilN 1470 133 1827-70 alignment trimmed tree collapsed 0.000 0.598
1964 161 Type IV pilus biogenesis protein PilM 1469 133 E110019 alignment trimmed tree collapsed 0.028 0.633
1965 161 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) 1
1966 161 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) 1468 132 55989 alignment trimmed tree collapsed 0.003 1.478
1967 161 ADP compounds hydrolase NudE (EC 3.6.1.-) 1467 134 MS 196-1 alignment trimmed tree collapsed 0.000 0.594
1968 161 ADP compounds hydrolase NudE (EC 3.6.1.-) 1467 130 MS 196-1 alignment trimmed tree collapsed 0.024 10.152
1969 161 hypothetical protein 1466 105 W alignment trimmed tree collapsed 0.026 0.869
1970 161 IgaA: a membrane protein that prevents overactivation of the Rcs regulatory system 124 E24377A alignment trimmed tree collapsed 0.006 1.724
1971 161 FIG001957: putative hydrolase 1464 134 E2348/69 alignment trimmed tree collapsed 0.000 0.546
1972 161 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) 1463 134 OP50 alignment trimmed tree collapsed 0.000 0.506
1973 161 33 kDa chaperonin (Heat shock protein 33) (HSP33) 1462 134 E24377A alignment trimmed tree collapsed 0.004 0.380
1974 161 Putative transport protein 1461 129 53638 alignment trimmed tree collapsed 0.017 0.166
1975 161 hypothetical protein 1460 126 B088 alignment trimmed tree collapsed 0.000 0.489
1976 161 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) 1459 132 B171 alignment trimmed tree collapsed 0.003 0.852
1977 161 FIG00638099: hypothetical protein 1300 1262 1458 72 55989 alignment trimmed tree collapsed 1.325 1.386
1978 161 FIG00637861: hypothetical protein 1301 1631 1263 1457 2179 261 55989 alignment trimmed tree collapsed 1.665 0.668
1979 161 Osmolarity sensory histidine kinase EnvZ 1456 127 55989 alignment trimmed tree collapsed 0.005 0.860
1980 161 Two-component system response regulator OmpR 817 820 1159 2084 2102 3161 3503 3655 4458 5040 5082 5259 265 467 1455 1706 1775 2034 2037 2248 2332 2397 3308 3432 3539 3583 3748 1790 E2348/69 alignment trimmed tree collapsed 0.000 0.874
1981 161 Transcription elongation factor GreB 1765 1454 2765 254 WV_060327 alignment trimmed tree collapsed 0.000 0.979
1982 161 Transcription accessory protein (S1 RNA-binding domain) 1453 131 MS 21-1 alignment trimmed tree collapsed 0.007 0.811
1983 161 hypothetical protein 1452 72 H591 alignment trimmed tree collapsed 0.165 0.517
1984 161 Ferrous iron transport protein A 1451 135 O157:H7 str. EC4024 alignment trimmed tree collapsed 0.000 0.136
1985 161 Ferrous iron transport protein B 1
1986 161 Ferrous iron transport protein B 1450 133 MS 146-1 alignment trimmed tree collapsed 0.006 2.803
1987 161 Ferrous iron-sensisng transcriptional regulator FeoC 1449 132 O157:H7 str. EC4113 alignment trimmed tree collapsed 0.013 0.393
1988 161 hypothetical protein 378 755 3325 3386 50 2422 2690 3105 4052 528 MS 145-7 alignment trimmed tree collapsed 0.804 0.364
1989 161 Biotin synthesis protein bioH 2689 122 E110019 alignment trimmed tree collapsed 0.010 0.356
1990 161 hypothetical protein 2688 121 B185 alignment trimmed tree collapsed 0.000 0.708
1991 161 Competence protein F homolog, phosphoribosyltransferase domain; protein YhgH required for utilization of DNA as sole source of carbon and energy 2687 134 E110019 alignment trimmed tree collapsed 0.018 1.495
1992 161 NfuA Fe-S protein maturation 2686 136 101-1 alignment trimmed tree collapsed 0.000 0.195
1993 161 High-affinity gluconate transporter GntT 730 971 2019 42 1199 1747 2685 3201 563 TA271 alignment trimmed tree collapsed 0.000 1.387
1994 161 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) 2684 136 TA280 alignment trimmed tree collapsed 0.011 0.530
1995 161 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25) 2684 130 DH1 alignment trimmed tree collapsed 0.010 0.553
1996 161 Maltodextrin phosphorylase (EC 2.4.1.1) 2011 2683 4397 273 MS 185-1 alignment trimmed tree collapsed 1.191 0.225
1997 161 Maltodextrin phosphorylase (EC 2.4.1.1) 2683 131 W alignment trimmed tree collapsed 0.007 0.591
1998 161 Transcriptional activator of maltose regulon, MalT 1
1999 161 Transcriptional activator of maltose regulon, MalT 131 O157:H7 str. EC508 alignment trimmed tree collapsed 0.008 0.811
2000 161 RNA 3'-terminal phosphate cyclase (EC 6.5.1.4) 127 SE11 alignment trimmed tree collapsed 0.021 0.674
2001 161 Protein RtcB 4387 135 55989 alignment trimmed tree collapsed 0.013 0.183
2002 161 Transcriptional regulatory protein RtcR 4388 125 H591 alignment trimmed tree collapsed 0.015 0.390
2003 161 Glycerol-3-phosphate regulon repressor, DeoR family 675 888 1285 1711 2569 2605 3838 4045 4684 80 296 666 749 1130 2961 3206 3767 4389 4620 1203 B088 alignment trimmed tree collapsed 2.073 0.972
2004 161 GlpG protein (membrane protein of glp regulon) 4390 133 O103:H2 str. 12009 alignment trimmed tree collapsed 0.000 0.097
2005 161 Thiosulfate sulfurtransferase GlpE (EC 2.8.1.1) 4372 1623 4391 263 CFT073 alignment trimmed tree collapsed 0.010 1.110
2006 161 Aerobic glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) 4392 133 E110019 alignment trimmed tree collapsed 0.017 0.768
2007 161 Hypothetical membrane protein 4393 105 55989 alignment trimmed tree collapsed 0.547 0.579
2008 161 hypothetical protein 4394 49 55989 alignment trimmed tree collapsed 0.179 0.178
2009 161 FIG00638985: hypothetical protein 4395 62 B7A alignment trimmed tree collapsed 0.013 0.275
2010 161 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) 4396 69 B7A alignment trimmed tree collapsed 0.127 0.897
2011 161 Glycogen phosphorylase (EC 2.4.1.1) 125 E24377A alignment trimmed tree collapsed 0.002 0.794
2012 161 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) 905 133 ETEC H10407 alignment trimmed tree collapsed 0.000 0.217
2013 161 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) 906 133 TA280 alignment trimmed tree collapsed 0.000 0.355
2014 161 Glycogen debranching enzyme (EC 3.2.1.-) 907 134 55989 alignment trimmed tree collapsed 0.012 0.155
2015 161 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) 126 MS 187-1 alignment trimmed tree collapsed 0.000 0.800
2016 161 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) 1750 134 MS 119-7 alignment trimmed tree collapsed 0.012 5.683
2017 161 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) 1750 134 O157:H7 str. EC4401 alignment trimmed tree collapsed 0.004 0.091
2018 161 Multiple antibiotic resistance protein marC 4283 1748 2872 3378 382 O111:H- str. 11128 alignment trimmed tree collapsed 1.803 1.167
2019 161 Low-affinity gluconate/H+ symporter GntU 730 971 1993 42 1199 1747 2685 3201 542 042 alignment trimmed tree collapsed 1.479 0.385
2020 161 Gluconokinase (EC 2.7.1.12) 974 1202 1746 190 IAI1 alignment trimmed tree collapsed 0.825 0.680
2021 161 Gluconate utilization system Gnt-I transcriptional repressor 942 970 1350 1465 2229 2577 2778 3225 3669 3714 4084 5358 5640 499 821 1198 1436 1745 1770 1860 1942 2526 3862 3940 4011 4361 4455 1597 O111:H- str. 11128 alignment trimmed tree collapsed 2.451 0.722
2022 161 FIG00640775: hypothetical protein 61 TA271 alignment trimmed tree collapsed 0.026 0.827
2023 161 Qercetin 2,3-dioxygenase 1685 1744 199 MS 107-1 alignment trimmed tree collapsed 0.000 0.665
2024 161 Putative oxidoreductase 3674 48 3944 260 55989 alignment trimmed tree collapsed 0.000 1.235
2025 161 Putative acetyltransferase 3630 2355 251 K12 alignment trimmed tree collapsed 2.099 0.938
2026 161 FIG00644386: hypothetical protein 4048 5 OP50 alignment trimmed tree collapsed 0.000 0.816
2027 161 Hypothetical protein yrhA 63 55989 alignment trimmed tree collapsed 0.036 0.108
2028 161 Hypothetical protein yrhB 1909 92 MS 196-1 alignment trimmed tree collapsed 0.045 0.692
2029 161 Gamma-glutamyltranspeptidase (EC 2.3.2.2) 1908 127 B185 alignment trimmed tree collapsed 0.003 0.737
2030 161 hypothetical protein 1907 130 BL21 alignment trimmed tree collapsed 0.000 0.309
2031 161 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) 1906 132 TA271 alignment trimmed tree collapsed 0.017 0.071
2032 161 SN-glycerol-3-phosphate transport ATP-binding protein UgpC (TC 3.A.1.1.3) 2837 4082 4701 4 1438 1905 2929 3838 608 K12 alignment trimmed tree collapsed 1.181 0.902
2033 161 SN-glycerol-3-phosphate transport system permease protein UgpE (TC 3.A.1.1.3) 4075 1444 1904 255 MS 116-1 alignment trimmed tree collapsed 1.545 0.936
2034 161 SN-glycerol-3-phosphate transport system permease protein UgpA (TC 3.A.1.1.3) 1903 136 O26:H11 str. 11368 alignment trimmed tree collapsed 0.008 0.156
2035 161 Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3) 1902 131 MS 119-7 alignment trimmed tree collapsed 0.000 0.049
2036 161 FIG00641394: hypothetical protein 1901 39 MS 115-1 alignment trimmed tree collapsed 0.000 1.109
2037 161 Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) 1787 1857 2038 2071 2837 3086 3203 3448 3993 4183 4710 4732 4790 4919 5003 5555 5687 5718 4 283 418 623 872 1802 1834 1899 1900 2082 2517 3358 3847 4472 4758 4790 4843 4911 2779 O127:H6 str. E2348/69 alignment trimmed tree collapsed 2.083 0.204
2038 161 Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) 1142 1150 1787 1857 2032 2037 2837 3086 3223 3387 3448 3949 3993 4082 4183 4453 4567 4672 4701 4710 4919 5279 5555 4 92 497 623 872 1438 1710 1815 1834 1869 1899 1900 1905 2273 2517 2929 2977 3106 3384 3778 3838 3847 4758 4790 4843 3437 1827-70 alignment trimmed tree collapsed 2.049 0.186
2039 161 Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) 1898 131 MS 21-1 alignment trimmed tree collapsed 0.005 0.075
2040 161 High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) 2039 1897 1898 268 B str. REL606 alignment trimmed tree collapsed 0.004 0.387
2041 161 High-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1) 2045 1893 1896 266 O157:H7 str. EC4113 alignment trimmed tree collapsed 0.005 1.481
2042 161 High-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1) 37 NC101 alignment trimmed tree collapsed 0.156 5.979
2043 161 hypothetical protein 1895 121 B088 alignment trimmed tree collapsed 0.024 0.367
2044 161 probable acetyltransferase YPO3809 1894 133 H591 alignment trimmed tree collapsed 0.000 0.121
2045 161 Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1) 1893 1896 265 F11 alignment trimmed tree collapsed 0.270 0.687
2046 161 RNA polymerase sigma factor RpoH 1892 134 B088 alignment trimmed tree collapsed 0.000 0.111
2047 161 Cell division protein FtsX 1891 133 E24377A alignment trimmed tree collapsed 0.000 0.415
2048 161 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) 926 1150 1857 2032 2037 2065 2184 2457 2837 3086 3203 3387 3448 3513 4053 4082 4183 4444 4453 4567 4710 4726 4790 4919 5003 5194 5380 5555 4 92 283 450 623 835 1438 1710 1802 1834 1873 1890 1900 1905 2517 2709 3003 3106 3242 3285 3292 3384 3655 3847 4472 4573 4758 4790 4843 3830 FVEC1412 alignment trimmed tree collapsed 2.102 0.277
2049 161 Signal recognition particle receptor protein FtsY (=alpha subunit) (TC 3.A.5.1.1) 1889 132 MS 115-1 alignment trimmed tree collapsed 0.018 0.270
2050 161 putative methylase YhhF( EC:2.1.1.- ) 1888 132 BL21(DE3) alignment trimmed tree collapsed 0.006 0.558
2051 161 probable membrane protein YPO3816a 1887 131 O157:H7 str. EC4401 alignment trimmed tree collapsed 0.000 0.263
2052 161 Putative receptor 1886 131 1125A alignment trimmed tree collapsed 0.000 0.540
2053 161 probable enzyme yhhN 1885 130 O157:H7 str. EC4045 alignment trimmed tree collapsed 0.000 0.361
2054 161 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) 1884 130 W alignment trimmed tree collapsed 0.000 1.058
2055 161 tRNA 5-methylaminomethyl-2-thiouridine synthase TusA 3461 636 1883 263 E2348/69 alignment trimmed tree collapsed 1.759 1.023
2056 161 Putative preQ0 transporter 1882 135 EC4100B alignment trimmed tree collapsed 0.005 0.800
2057 161 DcrB protein precursor 1881 136 O157:H7 EDL933 alignment trimmed tree collapsed 0.006 0.511
2058 161 Transporter, putative 1880 133 B171 alignment trimmed tree collapsed 0.027 7.266
2059 161 Putative PerM family permease 3648 1879 3532 258 APEC O1 alignment trimmed tree collapsed 0.007 0.928
2060 161 4'-phosphopantetheinyl transferase (EC 2.7.8.-) 1878 127 MS 78-1 alignment trimmed tree collapsed 0.000 0.613
2061 161 Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3) 1877 2694 217 E110019 alignment trimmed tree collapsed 1.964 0.762
2062 161 Nickel transport system permease protein NikB (TC 3.A.1.5.3) 2186 3260 4233 4564 528 1876 2695 3381 3657 3776 706 B171 alignment trimmed tree collapsed 1.595 0.376
2063 161 Nickel transport system permease protein NikC (TC 3.A.1.5.3) 4054 4232 4565 4676 1875 2696 3284 3382 3775 639 MS 21-1 alignment trimmed tree collapsed 0.000 0.085
2064 161 Nickel transport ATP-binding protein NikD (TC 3.A.1.5.3) 1781 1857 2183 2184 3086 3203 3263 3448 4052 4053 4082 4230 4231 4566 4567 4672 4710 5279 5555 530 623 866 1438 1815 1874 2517 2697 2698 3285 3286 3358 3383 3384 3654 3655 3778 3847 4472 4758 4790 2726 K12 alignment trimmed tree collapsed 2.805 0.945
2065 161 Nickel transport ATP-binding protein NikE (TC 3.A.1.5.3) 2184 4710 1873 3655 3847 394 55989 alignment trimmed tree collapsed 1.450 1.374
2066 161 Nickel responsive regulator NikR 1872 137 O157:H7 str. EC4501 alignment trimmed tree collapsed 0.000 0.324
2067 161 hypothetical protein 5542 1382 1871 110 O157:H7 str. EC869 alignment trimmed tree collapsed 0.000 0.732
2068 161 COG0842: ABC-type multidrug transport system, permease component 4900 919 1869 1870 426 CFT073 alignment trimmed tree collapsed 2.202 0.496
2069 161 ABC-2 type transporter 1870 135 042 alignment trimmed tree collapsed 0.013 0.114
2070 161 ABC-type multidrug transport system, permease component 2068 4900 919 1869 1870 408 MS 124-1 alignment trimmed tree collapsed 1.896 1.355
2071 161 ABC-type multidrug transport system, permease component 131 55989 alignment trimmed tree collapsed 0.019 6.287
2072 161 Putative membrane protein 2061 134 55989 alignment trimmed tree collapsed 0.006 0.096
2073 161 hypothetical protein 2062 88 1125A alignment trimmed tree collapsed 0.000 0.402
2074 161 FIG00637996: hypothetical protein 2063 98 55989 alignment trimmed tree collapsed 0.078 1.164
2075 161 hypothetical protein 2063 100 ATCC 8739 alignment trimmed tree collapsed 0.031 1.742
2076 161 hypothetical protein 2064 61 MS 119-7 alignment trimmed tree collapsed 0.166 0.961
2077 161 hypothetical protein 3578 132 E110019 alignment trimmed tree collapsed 0.048 0.980
2078 161 FIG01070364: hypothetical protein 2 OP50 alignment trimmed
2079 161 hypothetical protein 3579 53 ATCC 8739 alignment trimmed tree collapsed 0.000 0.856
2080 161 probable copper-binding protein 3580 14 ATCC 8739 alignment trimmed tree collapsed 0.000 0.630
2081 161 probable copper-binding protein 2104 3430 3581 21 ATCC 8739 alignment trimmed tree collapsed 0.679 0.947
2082 161 Heavy metal sensor histidine kinase 2103 3502 3657 5258 2333 2396 3431 3540 3582 460 ATCC 8739 alignment trimmed tree collapsed 2.804 0.812
2083 161 Heavy metal sensor histidine kinase 1
2084 161 Transcriptional regulatory protein pcoR 817 820 1159 1980 2102 3161 3503 3655 4458 5040 5082 5259 265 467 1455 1706 1775 2034 2037 2248 2332 2397 3308 3432 3539 3583 3748 1791 APEC O1 alignment trimmed tree collapsed 2.057 1.372
2085 161 Copper resistance protein D 3584 4352 115 55989 alignment trimmed tree collapsed 1.714 3.240
2086 161 hypothetical protein 3585 4 ETEC H10407 alignment trimmed tree 0.000 0.000
2087 161 Copper resistance protein C precursor 3927 3586 4353 140 MS 115-1 alignment trimmed tree collapsed 0.936 3.605
2088 161 Copper resistance protein B 3587 9 APEC O1 alignment trimmed tree collapsed 0.003 0.354
2089 161 Multicopper oxidase 5683 376 3588 128 55989 alignment trimmed tree collapsed 1.293 3.632
2090 161 PcoE 3590 10 55989 alignment trimmed tree collapsed 0.000 0.498
2091 161 Cell wall endopeptidase, family M23/M37 6 APEC O1 alignment trimmed tree collapsed 0.008 0.706
2092 161 FIG00643033: hypothetical protein 3592 10 55989 alignment trimmed tree collapsed 0.000 0.333
2093 161 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) 9 APEC O1 alignment trimmed tree collapsed 0.000 0.894
2094 161 CopG protein 3439 10 APEC O1 alignment trimmed tree collapsed 0.000 0.500
2095 161 Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA 1852 2882 3157 5156 5263 957 2328 2522 3438 4416 679 55989 alignment trimmed tree collapsed 2.981 1.828
2096 161 Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA 5263 2328 3438 4416 341 MS 115-1 alignment trimmed tree collapsed 2.145 1.344
2097 161 Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA 5263 2328 3438 151 APEC O1 alignment trimmed tree collapsed 0.031 0.106
2098 161 Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family 5262 2329 3437 145 55989 alignment trimmed tree collapsed 0.000 3.653
2099 161 Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family 5262 2329 3437 146 APEC O1 alignment trimmed tree collapsed 0.291 3.834
2100 161 Cation efflux system protein CusF precursor 5261 2330 3435 146 55989 alignment trimmed tree collapsed 0.716 3.712
2101 161 Cation efflux system protein CusC precursor 3213 5260 2285 2331 3434 4462 452 55989 alignment trimmed tree collapsed 2.494 0.809
2102 161 Copper-sensing two-component system response regulator CusR 817 820 1159 1980 2084 3161 3503 3655 4458 5040 5082 5259 265 467 1455 1706 1775 2034 2037 2248 2332 2397 3308 3432 3539 3583 3748 1791 APEC O1 alignment trimmed tree collapsed 2.241 0.934
2103 161 Copper sensory histidine kinase CusS 2333 3431 138 APEC O1 alignment trimmed tree collapsed 0.682 4.270
2104 161 Silver-binding protein 3430 18 APEC O1 alignment trimmed tree collapsed 0.000 0.812
2105 161 putative exported protein 3429 10 MS 115-1 alignment trimmed tree collapsed 0.125 0.655
2106 161 predicted ATP-dependent endonuclease, OLD family 3428 7 MS 115-1 alignment trimmed tree 0.000 0.000
2107 161 predicted ATP-dependent endonuclease, OLD family 3428 8 55989 alignment trimmed tree collapsed 0.032 2.633
2108 161 conserved hypothetical protein 3093 6 MS 196-1 alignment trimmed tree 0.000 0.000
2109 161 Tn7-like transposition protein D 3094 8 APEC O1 alignment trimmed tree collapsed 0.000 1.291
2110 161 IS1 orfA 106 276 651 728 2318 3196 3500 3908 4477 4979 5065 5199 4747 4813 779 B7A alignment trimmed tree collapsed 0.090 0.077
2111 161 Insertion element IS1 protein insB 105 655 727 2317 2676 3197 4596 4640 4980 5064 426 E110019 alignment trimmed tree collapsed 0.001 0.403
2112 161 Tn7-like transposition protein D 3094 8 APEC O1 alignment trimmed tree collapsed 0.000 2.646
2113 161 Tn7-like transposition protein C 7 MS 115-1 alignment trimmed tree collapsed 0.023 2.449
2114 161 Tn7-like transposition protein C 3095 8 APEC O1 alignment trimmed tree collapsed 0.000 0.378
2115 161 FIG00641922: hypothetical protein 7 MS 115-1 alignment trimmed tree collapsed 0.000 0.408
2116 161 transposon Tn7 transposition protein TnsA 4130 9 APEC O1 alignment trimmed tree collapsed 0.004 0.354
2117 161 NAD(FAD)-utilizing dehydrogenases 4129 133 55989 alignment trimmed tree collapsed 0.021 0.610
2118 161 Low-affinity inorganic phosphate transporter 2329 3692 4128 196 B088 alignment trimmed tree collapsed 0.000 0.706
2119 161 Universal stress protein B 4127 129 E110019 alignment trimmed tree collapsed 0.000 0.127
2120 161 Universal stress protein A 1339 3989 1147 1852 4126 401 O157:H7 str. EC869 alignment trimmed tree collapsed 1.217 1.250
2121 161 Di/tripeptide permease DtpB 1179 3685 5056 2124 4125 4163 4693 507 E24377A alignment trimmed tree collapsed 0.823 1.334
2122 161 hypothetical protein 4124 132 CFT073 alignment trimmed tree collapsed 0.005 0.368
2123 161 Oligopeptidase A (EC 3.4.24.70) 4300 3789 4123 252 MS 182-1 alignment trimmed tree collapsed 1.547 0.773
2124 161 Protein involved in catabolism of external DNA 4122 133 APEC O1 alignment trimmed tree collapsed 0.000 0.779
2125 161 Glutathione reductase (EC 1.8.1.7) 142 995 5452 5676 369 3086 3574 3734 4121 557 MS 84-1 alignment trimmed tree collapsed 0.005 0.035
2126 161 hypothetical protein 4120 128 E24377A alignment trimmed tree collapsed 0.054 0.553
2127 161 conserved hypothetical protein 4119 95 EC4100B alignment trimmed tree collapsed 0.205 0.275
2128 161 Arsenical resistance operon repressor 4118 105 E110019 alignment trimmed tree collapsed 0.046 0.454
2129 161 Arsenic efflux pump protein 4117 103 TA280 alignment trimmed tree collapsed 0.005 0.253
2130 161 Arsenate reductase (EC 1.20.4.1) 4116 134 55989 alignment trimmed tree collapsed 0.037 0.867
2131 161 Transcriptional regulator, ArsR family 3075 3298 4115 184 B088 alignment trimmed tree collapsed 0.000 1.528
2132 161 FIG00639112: hypothetical protein 4114 47 55989 alignment trimmed tree collapsed 0.054 0.050
2133 161 FIG00638514: hypothetical protein 1005 65 55989 alignment trimmed tree collapsed 0.106 0.117
2134 161 Starvation lipoprotein Slp 1006 161 O111:H- str. 11128 alignment trimmed tree collapsed 0.000 0.470
2135 161 putative transcriptional regulator 2140 1007 1012 260 1827-70 alignment trimmed tree collapsed 1.754 1.088
2136 161 Putative membrane transporter ATPase,YhiD 1008 54 B088 alignment trimmed tree collapsed 0.005 0.982
2137 161 Chaperone HdeB 1009 130 042 alignment trimmed tree collapsed 0.000 0.615
2138 161 Chaperone HdeA 1010 132 OP50 alignment trimmed tree collapsed 0.021 0.576
2139 161 Membrane transporter HdeD, H-NS repressed 1011 130 MS 116-1 alignment trimmed tree collapsed 0.000 0.276
2140 161 Transcriptional activator GadE 1012 230 042 alignment trimmed tree collapsed 1.849 0.894
2141 161 hypothetical protein 1013 107 E22 alignment trimmed tree collapsed 0.025 0.565
2142 161 Membrane fusion protein of RND family multidrug efflux pump 1851 4725 5157 958 1014 2523 4572 548 B171 alignment trimmed tree collapsed 0.843 0.442
2143 161 RND efflux system, inner membrane transporter CmeB 1852 3158 5156 5263 268 957 2328 2522 3438 4416 961 W alignment trimmed tree collapsed 2.286 0.645
2144 161 HTH-type transcriptional regulator gadW 460 1162 2146 3463 4250 5244 115 241 784 3402 3403 854 H299 alignment trimmed tree collapsed 1.188 0.540
2145 161 HTH-type transcriptional regulator gadW 3402 151 IAI1 alignment trimmed tree collapsed 0.024 0.377
2146 161 HTH-type transcriptional regulator gadX 4250 115 3403 211 B171 alignment trimmed tree collapsed 0.024 0.899
2147 161 hypothetical protein 3 MS 84-1 alignment trimmed tree collapsed 0.000 0.707
2148 161 Glutamate decarboxylase (EC 4.1.1.15) 4242 252 O157:H7 str. EC4024 alignment trimmed tree collapsed 0.025 0.170
2149 161 Glutamate decarboxylase (EC 4.1.1.15) 4242 205 O157:H7 str. EC4024 alignment trimmed tree collapsed 0.003 0.549
2150 161 Cytochrome c551 peroxidase (EC 1.11.1.5) 125 TA271 alignment trimmed tree collapsed 0.007 1.284
2151 161 Cytoplasmic trehalase (EC 3.2.1.28) 620 134 MS 107-1 alignment trimmed tree collapsed 0.002 1.991
2152 161 Putative regulator 3303 3445 566 619 363 IAI1 alignment trimmed tree collapsed 2.198 1.120
2153 161 LysR family transcriptional regulator YhjC 618 130 O26:H11 str. 11368 alignment trimmed tree collapsed 0.019 1.270
2154 161 Inner membrane protein YhjD 617 132 UTI89 alignment trimmed tree collapsed 0.001 0.582
2155 161 Inner membrane metabolite transport protein YhjE 3018 3529 616 2656 2831 445 F11 alignment trimmed tree collapsed 0.014 0.693
2156 161 Uncharacterized protein YhjG 354 128 BW2952 alignment trimmed tree collapsed 0.010 0.894
2157 161 GGDEF/EAL domain protein YhjH 3257 353 526 269 O83:H1 str. NRG 857C alignment trimmed tree collapsed 2.212 0.114
2158 161 GGDEF/EAL domain protein YhjH 3769 353 2462 257 str. K-12 substr. DH10B alignment trimmed tree collapsed 2.163 1.036
2159 161 hypothetical protein 352 52 MS 21-1 alignment trimmed tree collapsed 0.024 1.176
2160 161 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45) 1942 351 1253 211 55989 alignment trimmed tree collapsed 2.547 0.762
2161 161 Protein YhjJ, putative peptidase 350 130 B171 alignment trimmed tree collapsed 0.003 0.705
2162 161 Aerobic C4-dicarboxylate transporter for fumarate, L-malate, D-malate, succunate 1124 3792 349 859 2289 397 W3110 alignment trimmed tree collapsed 1.021 0.645
2163 161 hypothetical protein 348 115 OP50 alignment trimmed tree collapsed 0.000 0.255
2164 161 Protein yhjK 347 131 1827-70 alignment trimmed tree collapsed 0.002 0.101
2165 161 Cellulose synthase operon protein C 113 55989 alignment trimmed tree collapsed 0.015 0.864
2166 161 Endoglucanase precursor (EC 3.2.1.4) 4543 130 E22 alignment trimmed tree collapsed 0.000 0.144
2167 161 Cyclic di-GMP binding protein precursor 4542 127 ATCC 8739 alignment trimmed tree collapsed 0.006 1.102
2168 161 Cellulose synthase catalytic subunit [UDP-forming] (EC 2.4.1.12) 4541 124 55989 alignment trimmed tree collapsed 0.006 0.400
2169 161 Cellulose synthase, putative 4540 101 MS 45-1 alignment trimmed tree collapsed 0.000 1.261
2170 161 FIG004405: Putative cytoplasmic protein 4539 130 042 alignment trimmed tree collapsed 0.033 0.345
2171 161 FIG005274: hypothetical protein 4538 124 E24377A alignment trimmed tree collapsed 0.008 0.126
2172 161 FIG005274: hypothetical protein 4538 132 WV_060327 alignment trimmed tree collapsed 0.000 0.666
2173 161 FIG005119: putative inner membrane protein 4537 132 E24377A alignment trimmed tree collapsed 0.000 0.200
2174 161 FIG002337: predicted inner membrane protein 123 O157:H7 str. EC4076 alignment trimmed tree collapsed 0.011 1.124
2175 161 corresponds to STY4175 from Accession AL513382: Salmonella typhi CT18 277 2177 2178 4533 4534 4398 467 CFT073 alignment trimmed tree collapsed 1.033 0.702
2176 161 FIG00638919: hypothetical protein 2179 92 CFT073 alignment trimmed tree collapsed 0.344 0.598
2177 161 corresponds to STY4175 from Accession AL513382: Salmonella typhi CT18 277 2175 2178 4533 4534 466 O157:H7 EDL933 alignment trimmed tree collapsed 0.992 0.089
2178 161 corresponds to STY4175 from Accession AL513382: Salmonella typhi CT18 277 2175 2177 4533 4534 4398 467 55989 alignment trimmed tree collapsed 0.092 1.004
2179 161 FIG00638919: hypothetical protein 2176 79 CFT073 alignment trimmed tree collapsed 0.027 0.174
2180 161 corresponds to STY4175 from Accession AL513382: Salmonella typhi CT18 2175 2177 2178 226 55989 alignment trimmed tree collapsed 0.094 0.362
2181 161 hypothetical protein 88 O157:H7 str. EC4115 alignment trimmed tree collapsed 0.020 0.175
2182 161 Serine transporter 1688 1693 3653 3955 3960 383 E2348/69 alignment trimmed tree collapsed 0.000 0.751
2183 161 Dipeptide transport ATP-binding protein DppF (TC 3.A.1.5.2) 4231 4567 2697 3384 3654 408 SE11 alignment trimmed tree collapsed 0.016 0.570
2184 161 Dipeptide transport ATP-binding protein DppD (TC 3.A.1.5.2) 4053 4230 4231 4566 2697 2698 3285 3383 3655 604 O157:H7 str. EC4196 alignment trimmed tree collapsed 1.180 1.402
2185 161 Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) 4054 4676 3284 3656 3775 427 TA143 alignment trimmed tree collapsed 1.153 1.240
2186 161 Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) 2062 3260 4233 4564 528 1876 2695 3381 3657 3776 706 042 alignment trimmed tree collapsed 1.163 0.459
2187 161 hypothetical protein 3658 72 FVEC1412 alignment trimmed tree collapsed 0.136 1.021
2188 161 Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) 2694 3777 338 MS 145-7 alignment trimmed tree collapsed 1.710 0.807
2189 161 hypothetical protein 3659 105 MS 145-7 alignment trimmed tree collapsed 0.021 0.688
2190 161 Phosphoethanolamine transferase specific for the outer Kdo residue of lipopolysaccharide 3660 127 55989 alignment trimmed tree collapsed 0.005 0.731
2191 161 putative fimbrial protein precursor 1621 2195 3427 5236 234 593 2149 3365 3661 549 B171 alignment trimmed tree collapsed 1.884 0.653
2192 161 Putative fimbrial protein 1728 4799 5240 169 237 3362 3662 4320 418 B088 alignment trimmed tree collapsed 2.268 0.516
2193 161 Outer membrane usher protein LpfC 2197 5238 170 236 3663 4212 718 KO11 alignment trimmed tree collapsed 1.411 0.501
2194 161 Chaperone protein lpfB precursor 1620 1726 2198 3191 4257 4796 4802 5237 171 235 1515 1601 2150 3364 4211 4317 4744 1165 55989 alignment trimmed tree collapsed 2.644 0.629
2195 161 Long polar fimbria protein A precursor 1621 1725 2191 2196 3427 4255 4795 4801 4933 5236 172 234 593 1599 2127 2149 3365 3661 4213 4318 4319 1273 KO11 alignment trimmed tree collapsed 2.313 0.452
2196 162 Uncharacterized fimbrial-like protein ygiL precursor 1621 2191 2195 3427 4795 4933 593 2127 2149 3365 3661 4213 732 MS 146-1 alignment trimmed tree collapsed 2.615 0.202
2197 162 Uncharacterized outer membrane usher protein yqiG precursor 2193 3663 4212 243 55989 alignment trimmed tree collapsed 0.003 0.510
2198 162 Hypothetical fimbrial chaperone yqiH 1726 4796 171 4211 4744 423 55989 alignment trimmed tree collapsed 1.510 0.727
2199 162 hypothetical protein 4210 182 O103:H2 str. 12009 alignment trimmed tree collapsed 1.768 0.841
2200 162 Glycogen synthesis protein glgS 4209 131 O26:H11 str. 11368 alignment trimmed tree collapsed 0.016 0.206
2201 162 hypothetical protein 2020 136 B7A alignment trimmed tree collapsed 0.052 0.267
2202 162 Putative membrane protein 2021 129 IAI39 alignment trimmed tree collapsed 0.018 0.252
2203 162 ADP-heptose synthase (EC 2.7.-.-) / D-glycero-beta-D-manno-heptose 7-phosphate kinase 4435 132 M718 alignment trimmed tree collapsed 0.003 0.860
2204 162 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) 4436 126 55989 alignment trimmed tree collapsed 0.006 0.678
2205 162 Adenylate cyclase (EC 4.6.1.1) 4437 128 E24377A alignment trimmed tree collapsed 0.017 0.276
2206 162 FIG00642543: hypothetical protein 32 H736 alignment trimmed tree collapsed 0.000 0.425
2207 162 Arylsulfatase (EC 3.1.6.1) 4438 124 str. K-12 substr. DH10B alignment trimmed tree collapsed 0.005 0.032
2208 162 tRNA nucleotidyltransferase (EC 2.7.7.21) (EC 2.7.7.25) 4439 127 IAI1 alignment trimmed tree collapsed 0.000 0.321
2209 162 Undecaprenyl-diphosphatase (EC 3.6.1.27) 4440 130 O127:H6 str. E2348/69 alignment trimmed tree collapsed 0.000 0.560
2210 162 Dihydroneopterin aldolase (EC 4.1.2.25) 3384 3103 4441 264 MS 78-1 alignment trimmed tree collapsed 1.654 0.464
2211 162 Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY 128 O157:H7 str. EC4024 alignment trimmed tree collapsed 0.000 0.103
2212 162 Putative transcriptional regulator LYSR-type 1827 2153 3875 4749 5493 618 766 1338 2366 4342 4442 793 E24377A alignment trimmed tree collapsed 3.063 0.131
2213 162 L(+)-tartrate dehydratase alpha subunit (EC 4.2.1.32) 127 TA143 alignment trimmed tree collapsed 0.000 0.717
2214 162 L(+)-tartrate dehydratase beta subunit (EC 4.2.1.32) 4443 131 MS 107-1 alignment trimmed tree collapsed 0.016 1.115
2215 162 COG0471: Di- and tricarboxylate transporters 5305 395 4444 294 MS 182-1 alignment trimmed tree collapsed 1.062 0.295
2216 162 COG0471: Di- and tricarboxylate transporters 4982 5305 395 4444 400 B7A alignment trimmed tree collapsed 1.312 0.612
2217 162 YgjD/Kae1/Qri7 family, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA 4445 132 MS 119-7 alignment trimmed tree collapsed 0.000 0.097
2218 162 SSU ribosomal protein S21p 4446 124 101-1 alignment trimmed tree collapsed 0.000 0.092
2219 162 DNA primase (EC 2.7.7.-) 4447 130 O157:H7 str. EC4042 alignment trimmed tree collapsed 0.000 0.654
2220 162 RNA polymerase sigma factor RpoD 4449 129 E24377A alignment trimmed tree collapsed 0.002 0.479
2221 162 RNA polymerase sigma factor RpoD 2046 2616 1892 3196 4449 403 ED1a alignment trimmed tree collapsed 1.036 1.270
2222 162 G:T/U mismatch-specific uracil/thymine DNA-glycosylase 4450 128 MS 146-1 alignment trimmed tree collapsed 0.000 0.578
2223 162 iron-chelator utilization protein 4451 128 EC4100B alignment trimmed tree collapsed 0.000 0.839
2224 162 Transcriptional regulator, PadR family 4452 132 B171 alignment trimmed tree collapsed 0.015 0.878
2225 162 Aerotaxis sensor receptor protein 4453 134 W alignment trimmed tree collapsed 0.000 0.129
2226 162 FIG00643363: hypothetical protein 12 MS 21-1 alignment trimmed tree collapsed 0.043 1.776
2227 162 Putrescine aminotransferase (EC 2.6.1.82) 4454 129 ED1a alignment trimmed tree collapsed 0.000 0.738
2228 162 tRNA-binding protein YgjH 3194 441 268 NC101 alignment trimmed tree collapsed 1.612 0.717
2229 162 Evolved beta-D-galactosidase transcriptional repressor 942 1350 2021 2734 3225 3714 4084 5358 499 821 963 1436 1745 1860 1942 4011 4455 1122 MS 119-7 alignment trimmed tree collapsed 2.699 1.429
2230 162 Evolved beta-D-galactosidase, alpha subunit 4456 131 KO11 alignment trimmed tree collapsed 0.008 0.212
2231 162 Evolved beta-D-galactosidase, beta subunit 4457 130 TA271 alignment trimmed tree collapsed 0.000 0.588
2232 162 Putative oxidoreductase 856 2670 4458 250 MS 84-1 alignment trimmed tree collapsed 0.003 0.193
2233 162 orf, hypothetical protein 4459 127 55989 alignment trimmed tree collapsed 0.004 0.263
2234 162 Putative isomerase 4460 126 55989 alignment trimmed tree collapsed 0.020 1.245
2235 162 2,4-dienoyl-CoA reductase [NADPH] (EC 1.3.1.34) 128 H591 alignment trimmed tree collapsed 0.015 0.763
2236 162 Putative cytoplasmic protein 2421 2798 139 TA206 alignment trimmed tree collapsed 0.000 0.440
2237 162 hypothetical protein 2797 53 IAI1 alignment trimmed tree collapsed 0.000 0.176
2238 162 23S rRNA (guanine-N-2-) -methyltransferase rlmG (EC 2.1.1.-) 2796 131 E110019 alignment trimmed tree collapsed 0.012 0.299
2239 162 COG1451: Predicted metal-dependent hydrolase 2795 133 B7A alignment trimmed tree collapsed 0.019 0.116
2240 162 SanA protein 2794 124 B7A alignment trimmed tree collapsed 0.032 0.763
2241 162 Possible oxidoreductase 2793 132 55989 alignment trimmed tree collapsed 0.029 0.066
2242 162 Integral membrane protein TerC 2792 132 ETEC H10407 alignment trimmed tree collapsed 0.000 0.793
2243 162 Sodium:dicarboxylate symporter 1124 2289 2334 262 55989 alignment trimmed tree collapsed 1.703 0.371
2244 162 Inner membrane protein ygjV 2335 131 EC4100B alignment trimmed tree collapsed 0.017 1.090
2245 162 Altronate hydrolase (EC 4.2.1.7) 2336 134 WV_060327 alignment trimmed tree collapsed 0.000 0.180
2246 162 Altronate hydrolase (EC 4.2.1.7) 1708 746 2336 265 E24377A alignment trimmed tree collapsed 0.005 0.252
2247 162 Uronate isomerase (EC 5.3.1.12) 2337 132 W alignment trimmed tree collapsed 0.005 2.658
2248 162 Hexuronate transporter 993 1551 3321 673 2338 3576 584 E24377A alignment trimmed tree collapsed 3.233 0.755
2249 162 Alpha-fimbriae tip adhesin 2339 29 55989 alignment trimmed tree collapsed 0.005 0.233
2250 162 Alpha-fimbriae usher protein 48 E24377A alignment trimmed tree collapsed 0.002 0.181
2251 162 Alpha-fimbriae major subunit 1513 51 O26:H11 str. 11368 alignment trimmed tree collapsed 0.000 0.155
2252 162 Alpha-fimbriae chaperone protein 1512 47 E110019 alignment trimmed tree collapsed 0.000 0.205
2253 162 Hexuronate utilization operon transcriptional repressor ExuR 734 46 3702 294 O157:H7 EDL933 alignment trimmed tree collapsed 1.118 0.336
2254 162 DedA family inner membrane protein YqjA 3701 131 IAI1 alignment trimmed tree collapsed 0.005 0.093
2255 162 Uncharacterized protein YqjB 3700 131 E2348/69 alignment trimmed tree collapsed 0.023 2.687
2256 162 Periplasmic protein YqjC 3699 132 E24377A alignment trimmed tree collapsed 0.113 0.071
2257 162 Uncharacterized membrane protein YqjD 3081 3345 2137 3698 396 MS 200-1 alignment trimmed tree collapsed 1.163 1.389
2258 162 Inner membrane protein YqjE 3697 124 536A alignment trimmed tree collapsed 0.000 0.098
2259 162 Inner membrane protein YqjK 3696 133 55989 alignment trimmed tree collapsed 0.011 1.396
2260 162 Inner membrane protein YqjF 3695 122 MS 145-7 alignment trimmed tree collapsed 0.000 0.284
2261 162 Glutathione S-transferase, omega (EC 2.5.1.18) 3694 130 SMS-3-5 alignment trimmed tree collapsed 0.016 0.239
2262 162 hypothetical protein 3693 231 042 alignment trimmed tree collapsed 0.818 0.791
2263 163 Uncharacterized protein ImpB 5519 650 1553 132 55989 alignment trimmed tree collapsed 0.443 1.104
2264 163 FIG00641647: hypothetical protein 108 55989 alignment trimmed tree collapsed 0.078 0.669
2265 163 orf; Unknown function 227 54 042 alignment trimmed tree collapsed 0.067 0.632
2266 163 FIG00642443: hypothetical protein 228 60 042 alignment trimmed tree collapsed 0.035 0.476
2267 163 FIG00638173: hypothetical protein 4806 6 55989 alignment trimmed tree collapsed 0.000 0.447
2268 163 orf, conserved hypothetical protein 716 3551 109 042 alignment trimmed tree collapsed 1.743 1.599
2269 163 FIG00640074: hypothetical protein 716 717 3551 3552 148 55989 alignment trimmed tree collapsed 0.111 0.925
2270 163 FIG00643112: hypothetical protein 5 55989 alignment trimmed tree 0.000 0.000
2271 163 Intergenic-region protein 24 718 3553 179 O103:H2 str. 12009 alignment trimmed tree collapsed 0.182 0.617
2272 163 Intergenic-region protein 24 718 3553 164 042 alignment trimmed tree collapsed 0.129 0.505
2273 163 Haemolysin expression modulating protein paralog 524 3675 5154 1081 1411 3945 327 55989 alignment trimmed tree collapsed 0.691 1.295
2274 163 FIG00641792: hypothetical protein 18 55989 alignment trimmed tree collapsed 0.000 0.230
2275 163 hypothetical protein 76 86 721 3555 1290 4262 327 042 alignment trimmed tree collapsed 0.015 0.836
2276 163 FIG00638808: hypothetical protein 1
2277 163 FIG00641089: hypothetical protein 2027 7 042 alignment trimmed tree collapsed 0.000 0.866
2278 163 FIG00643711: hypothetical protein 2028 8 55989 alignment trimmed tree collapsed 0.000 0.401
2279 163 FIG00638471: hypothetical protein 3166 37 ED1a alignment trimmed tree collapsed 2.305 0.761
2280 163 NgrB 3562 20 MS 124-1 alignment trimmed tree collapsed 1.302 1.696
2281 163 NgrB 16 3563 4035 222 042 alignment trimmed tree collapsed 2.291 0.417
2282 163 Antigen 43 precursor 68 042 alignment trimmed tree collapsed 0.257 1.949
2283 163 probable membrane protein b2001 443 37 55989 alignment trimmed tree collapsed 0.047 1.169
2284 163 hypothetical protein 444 48 MS 200-1 alignment trimmed tree collapsed 0.000 0.283
2285 163 hypothetical protein 445 45 B185 alignment trimmed tree collapsed 0.000 0.511
2286 163 hypothetical protein 19 130 256 288 042 alignment trimmed tree collapsed 0.103 0.410
2287 163 Antirestriction protein klcA 21 1191 3574 240 55989 alignment trimmed tree collapsed 0.147 0.019
2288 163 COG2003: DNA repair proteins 22 1190 3575 234 55989 alignment trimmed tree collapsed 0.067 0.150
2289 163 YeeT 23 1189 3576 284 E24377A alignment trimmed tree collapsed 0.101 0.138
2290 163 YeeU protein (antitoxin to YeeV) 215 295 1188 3577 345 S88 alignment trimmed tree collapsed 0.190 0.354
2291 163 YeeV toxin protein 1187 3578 248 042 alignment trimmed tree collapsed 0.216 0.276
2292 163 FIG00640474: hypothetical protein 20 E24377A alignment trimmed tree collapsed 0.096 0.718
2293 163 Z1226 protein 299 313 382 1184 1070 170 042 alignment trimmed tree collapsed 0.011 0.504
2294 163 General secretion pathway protein M 141 95 EC4100B alignment trimmed tree collapsed 0.039 0.723
2295 163 General secretion pathway protein L 142 107 1827-70 alignment trimmed tree collapsed 2.142 0.477
2296 163 General secretion pathway protein K 143 75 E22 alignment trimmed tree collapsed 0.006 0.497
2297 163 General secretion pathway protein J 144 120 MS 84-1 alignment trimmed tree collapsed 0.011 0.627
2298 163 General secretion pathway protein I 145 110 ETEC H10407 alignment trimmed tree collapsed 0.096 0.588
2299 163 General secretion pathway protein H 146 84 MS 200-1 alignment trimmed tree collapsed 0.202 8.268
2300 163 General secretion pathway protein G 147 168 HS alignment trimmed tree collapsed 0.641 0.949
2301 163 General secretion pathway protein F 148 164 E24377A alignment trimmed tree collapsed 0.008 1.010
2302 163 General secretion pathway protein E 587 5667 149 360 4903 318 E24377A alignment trimmed tree collapsed 0.580 0.327
2303 163 General secretion pathway protein E 149 91 2362-75 alignment trimmed tree collapsed 0.001 0.296
2304 163 General secretion pathway protein D 150 78 BL21 alignment trimmed tree collapsed 0.002 1.008
2305 163 General secretion pathway protein C 151 77 IAI1 alignment trimmed tree collapsed 0.071 1.307
2306 163 Hypothetical lipoprotein yghG precursor 152 91 str. K-12 substr. MG1655 alignment trimmed tree collapsed 0.000 0.874
2307 163 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) 153 123 B088 alignment trimmed tree collapsed 1.338 0.510
2308 163 Accessory colonization factor AcfD precursor 0
2309 163 FIG00641161: hypothetical protein 28 MS 107-1 alignment trimmed tree collapsed 0.205 0.514
2310 163 L-lactate permease 3080 3672 288 EC4100B alignment trimmed tree collapsed 0.525 1.117
2311 163 Malate synthase G (EC 2.3.3.9) 3673 105 55989 alignment trimmed tree collapsed 0.012 0.252
2312 163 Hypothetical protein GlcG in glycolate utilization operon 3674 105 IAI39 alignment trimmed tree collapsed 0.009 0.249
2313 163 Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF 3324 3675 4051 232 K12 alignment trimmed tree collapsed 0.011 1.088
2314 163 Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE 3676 103 MS 107-1 alignment trimmed tree collapsed 0.027 1.192
2315 163 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD 3677 103 MS 146-1 alignment trimmed tree collapsed 0.003 0.934
2316 163 Glycolate utilization operon transcriptional activator GlcC 1467 1482 5673 366 2524 3079 3678 501 55989 alignment trimmed tree collapsed 1.833 0.298
2317 163 Insertion element IS1 protein insB 105 655 727 2111 2676 3197 4596 4640 4980 5064 426 E110019 alignment trimmed tree collapsed 0.001 0.404
2318 163 IS1 ORF1 106 276 651 728 2110 3196 3500 3908 4477 4979 5065 5199 4747 4813 779 53638 alignment trimmed tree collapsed 0.057 0.309
2319 163 8-amino-7-oxononanoate synthase (EC 2.3.1.47) 3683 93 E110019 alignment trimmed tree collapsed 0.018 0.976
2320 163 Permease Ygh-P2, YjgP/YjgQ family 1196 3684 220 55989 alignment trimmed tree collapsed 0.052 1.330
2321 163 Permease Ygh-P1, YjgP/YjgQ family 3685 98 MS 107-1 alignment trimmed tree collapsed 0.026 0.308
2322 163 Permease Ygh-P1, YjgP/YjgQ family 3685 97 IAI39 alignment trimmed tree collapsed 0.011 1.598
2323 163 Transcriptional regulator, YtfJ-family 914 2991 3686 228 SMS-3-5 alignment trimmed tree collapsed 0.703 1.188
2324 163 Conserved hypothetical TPR repeat protein, clustered with yghQ 3687 96 E24377A alignment trimmed tree collapsed 0.023 0.902
2325 163 Inner membrane protein YghQ, probably involved in polysaccharide biosynthesis 3688 96 O111:H- str. 11128 alignment trimmed tree collapsed 0.010 0.685
2326 163 Conserved protein YghR, with nucleoside triphosphate hydrolase domain 2328 3689 3691 208 E24377A alignment trimmed tree collapsed 1.521 0.610
2327 163 Conserved ATP-binding protein YghS 2326 2328 3689 3690 3691 313 E24377A alignment trimmed tree collapsed 1.394 1.010
2328 163 Conserved protein YghT, with nucleoside triphosphate hydrolase domain 2326 2327 3689 3690 3691 313 55989 alignment trimmed tree collapsed 0.005 1.333
2329 163 Low-affinity inorganic phosphate transporter 2118 3692 4128 196 WV_060327 alignment trimmed tree collapsed 0.233 1.530
2330 163 Glutathionylspermidine synthase (EC 6.3.1.8) / Glutathionylspermidine amidohydrolase (EC 3.5.1.78) 3519 132 str. K-12 substr. DH10B alignment trimmed tree collapsed 0.016 0.712
2331 163 Uncharacterized GST-like protein yghU associated with glutathionylspermidine synthetase/amidase 3518 130 55989 alignment trimmed tree collapsed 0.022 0.709
2332 163 Transposase 2580 3418 4780 5370 4816 258 MS 145-7 alignment trimmed tree collapsed 0.001 0.304
2333 163 Transposase 944 1701 2418 2580 3418 4780 5370 4816 286 MS 119-7 alignment trimmed tree collapsed 0.000 0.135
2334 163 hypothetical protein 5371 5547 37 MS 119-7 alignment trimmed tree collapsed 0.040 0.615
2335 163 [NiFe] hydrogenase metallocenter assembly protein HybG 2596 594 2408 267 IAI1 alignment trimmed tree collapsed 0.000 0.277
2336 163 [NiFe] hydrogenase nickel incorporation protein HybF 2594 595 2410 266 O127:H6 str. E2348/69 alignment trimmed tree collapsed 0.009 0.152
2337 163 Hydrogenase-2 operon protein hybE 596 132 042 alignment trimmed tree collapsed 0.000 0.702
2338 163 Hydrogenase maturation protease (EC 3.4.24.-) 4581 597 3251 147 H591 alignment trimmed tree collapsed 1.410 0.591
2339 163 Uptake hydrogenase large subunit (EC 1.12.99.6) 4579 598 3253 263 B str. REL606 alignment trimmed tree collapsed 0.972 1.031
2340 163 Ni/Fe-hydrogenase 2 B-type cytochrome subunit 599 132 W3110 alignment trimmed tree collapsed 0.006 0.755
2341 163 Hydrogenase-2 operon protein hybA precursor 600 131 O157:H7 str. EC4115 alignment trimmed tree collapsed 0.000 0.657
2342 163 Uptake hydrogenase small subunit precursor (EC 1.12.99.6) 601 78 MS 182-1 alignment trimmed tree collapsed 0.000 0.289
2343 163 FIG00639640: hypothetical protein 602 69 O157:H7 str. FRIK966 alignment trimmed tree collapsed 0.000 0.121
2344 163 Uncharacterized protein YghW 603 130 E24377A alignment trimmed tree collapsed 0.000 0.425
2345 163 Putative enzyme 604 110 E22 alignment trimmed tree collapsed 0.011 0.890
2346 163 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 2730 605 960 990 4833 635 55989 alignment trimmed tree collapsed 2.824 0.685
2347 163 Putative membrane protein 606 133 E2348/69 alignment trimmed tree collapsed 0.000 0.300
2348 163 Putative oxidoreductase 133 F11 alignment trimmed tree collapsed 0.005 0.096
2349 163 Biopolymer transport protein ExbD/TolR 4954 2230 2804 259 O157:H7 str. EC4076 alignment trimmed tree collapsed 0.000 0.954
2350 163 MotA/TolQ/ExbB proton channel family protein 2231 108 O157:H7 str. EC4196 alignment trimmed tree collapsed 0.001 0.414
2351 163 Cystathionine beta-lyase (EC 4.4.1.8) 2232 136 55989 alignment trimmed tree collapsed 0.011 0.156
2352 163 DedA family inner membrane protein YghB 2254 2233 3701 257 APEC O1 alignment trimmed tree collapsed 0.560 0.782
2353 163 Hypothetical transcriptional regulator YqhC 2234 132 55989 alignment trimmed tree collapsed 0.004 0.438
2354 163 Hypothetical oxidoreductase YqhD (EC 1.1.-.-) 2695 4559 2236 3377 3812 445 B7A alignment trimmed tree collapsed 2.427 0.775
2355 163 Methylglyoxal reductase, acetol producing (EC 1.1.1.-) / 2,5-diketo-D-gluconate reductase A (EC 1.1.1.274) 5557 2237 4341 427 UTI89 alignment trimmed tree collapsed 0.925 0.852
2356 163 Methylglyoxal reductase, acetol producing (EC 1.1.1.-) / 2,5-diketo-D-gluconate reductase A (EC 1.1.1.274) 5557 2237 4341 4833 508 O157:H7 alignment trimmed tree collapsed 1.657 1.370
2357 163 hypothetical protein 2238 32 O26:H11 str. 11368 alignment trimmed tree collapsed 0.000 0.180
2358 163 Uncharacterized protein yqhG precursor 2239 100 H591 alignment trimmed tree collapsed 0.000 0.661
2359 163 hypothetical protein 3734 2240 3886 246 O103:H2 str. 12009 alignment trimmed tree collapsed 0.012 0.713
2360 163 UPF0313 protein ygiQ 2241 129 FVEC1412 alignment trimmed tree collapsed 0.002 0.848
2361 163 Putative cell division protein precursor 5683 376 2242 261 2362-75 alignment trimmed tree collapsed 0.000 0.937
2362 163 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) 2243 133 O157:H7 str. EC4024 alignment trimmed tree collapsed 0.010 0.021
2363 163 Topoisomerase IV subunit A (EC 5.99.1.-) 2244 131 O157:H7 str. EC4115 alignment trimmed tree collapsed 0.002 0.603
2364 163 Uncharacterized protein ygiV 2245 130 BL21(DE3) alignment trimmed tree collapsed 0.013 0.849
2365 163 Protein ygiW precursor 4298 2246 2858 229 042 alignment trimmed tree collapsed 1.428 0.854
2366 163 Two-component system response regulator QseB 820 1159 1797 1980 2084 2102 3161 3503 3655 4458 5259 265 881 1455 1706 2037 2248 2332 2397 3432 3539 3583 3748 1368 B185 alignment trimmed tree collapsed 1.907 1.311
2367 163 Two-component system response regulator QseB 817 820 1159 1329 1980 2084 2102 3161 3503 3655 4458 5040 5082 5259 265 467 1157 1455 1706 1775 2034 2037 2248 2332 2397 3308 3432 3539 3583 3748 1918 O157:H7 str. EC4486 alignment trimmed tree collapsed 2.276 0.255
2368 163 Sensory histidine kinase QseC 818 2035 2249 3540 3582 391 IAI1 alignment trimmed tree collapsed 2.037 0.772
2369 163 FIG00640011: hypothetical protein 2741 19 O111:H- str. 11128 alignment trimmed tree collapsed 0.000 0.394
2370 163 Modulator of drug activity B 2740 135 str. K-12 substr. MG1655 alignment trimmed tree collapsed 0.000 0.200
2371 163 YgiN protei involved in menadione metabolism 2739 133 55989 alignment trimmed tree collapsed 0.019 0.593
2372 163 Topoisomerase IV subunit B (EC 5.99.1.-) 2738 91 CFT073 alignment trimmed tree collapsed 0.000 0.611
2373 163 Putative esterase, FIGfam005057 2737 132 E110019 alignment trimmed tree collapsed 0.000 0.152
2374 163 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) 2736 128 536 alignment trimmed tree collapsed 0.008 0.590
2375 163 Putative cytoplasmic protein 2735 132 O157:H7 str. EC4501 alignment trimmed tree collapsed 0.000 0.127
2376 163 ADP-ribose pyrophosphatase (EC 3.6.1.13) 2878 2734 4412 231 O103:H2 str. 12009 alignment trimmed tree collapsed 0.000 0.879
2377 163 Type I secretion outer membrane protein, TolC precursor 2733 130 B171 alignment trimmed tree collapsed 0.003 0.852
2378 163 UPF0441 protein ygiB 2732 125 B7A alignment trimmed tree collapsed 0.000 0.244
2379 163 Similarity with glutathionylspermidine synthase (EC 6.3.1.8), group 1 883 1135 2731 250 E110019 alignment trimmed tree collapsed 0.003 0.879
2380 163 Uncharacterized protein ygiD 2730 133 MS 107-1 alignment trimmed tree collapsed 0.000 0.223
2381 163 Zinc transporter ZupT 6 E2348/69 alignment trimmed tree collapsed 0.404 2.236
2382 163 Zinc transporter ZupT 2729 130 IAI39 alignment trimmed tree collapsed 0.000 0.333
2383 163 hypothetical protein 2728 130 SMS-3-5 alignment trimmed tree collapsed 0.467 0.490
2384 163 3,4-dihydroxy-2-butanone 4-phosphate synthase 4406 135 53638 alignment trimmed tree collapsed 0.876 0.112
2385 163 Uncharacterized protein yqiC 4407 131 53638 alignment trimmed tree collapsed 0.156 0.937
2386 164 hypothetical protein 1
2387 165 FIG00643705: hypothetical protein 6 042 alignment trimmed tree collapsed 0.000 0.447
2388 165 FIG00643585: hypothetical protein 647 11 55989 alignment trimmed tree collapsed 0.067 0.350
2389 165 FIG00643585: hypothetical protein 1
2390 165 conserved hypothetical protein 648 6 042 alignment trimmed tree collapsed 0.003 0.707
2391 166 Transposase 4595 70 55989 alignment trimmed tree collapsed 0.409 1.650
2392 166 Transposase 290 60 1827-70 alignment trimmed tree collapsed 0.399 2.406
2393 166 Transposase 278 291 57 ED1a alignment trimmed tree collapsed 0.244 2.586
2394 166 Transposase 291 663 3718 71 ED1a alignment trimmed tree collapsed 0.132 1.416
2395 166 iron aquisition yersiniabactin synthesis enzyme (Irp2) 4271 19 UTI89 alignment trimmed tree collapsed 0.110 1.936
2396 166 iron aquisition yersiniabactin synthesis enzyme (Irp2) 4272 4 55989 alignment trimmed tree 0.000 0.000
2397 166 FIG00641446: hypothetical protein 4274 41 55989 alignment trimmed tree collapsed 0.138 1.844
2398 166 Putative transcriptional regulator 5419 3033 4275 60 042 alignment trimmed tree collapsed 1.297 0.679
2399 166 Co-activator of prophage gene expression IbrB 5294 406 212 55989 alignment trimmed tree collapsed 0.489 0.895
2400 167 FIG00644055: hypothetical protein 698 987 1195 1213 1227 39 IAI39 alignment trimmed tree 0.000 0.000
2401 167 hypothetical protein 697 986 1194 1214 1228 43 SE15 alignment trimmed tree collapsed 0.028 1.535
2402 167 putative transposase 696 985 1193 1215 1229 66 E24377A alignment trimmed tree collapsed 0.046 0.400
2403 167 ClpB protein 1017 44 55989 alignment trimmed tree collapsed 1.511 1.944
2404 167 IcmF-related protein 1018 8 042 alignment trimmed tree collapsed 0.003 0.413
2405 167 IcmF-related protein 1
2406 167 IcmF-related protein 6 55989 alignment trimmed tree collapsed 0.000 0.446
2407 167 Uncharacterized protein ImpJ/VasE 1843 7 55989 alignment trimmed tree collapsed 0.154 0.408
2408 167 FIG00643467: hypothetical protein 1844 3 042 alignment trimmed tree collapsed 0.000 0.707
2409 167 Uncharacterized protein ImpA 1845 9 55989 alignment trimmed tree collapsed 0.000 0.583
2410 167 VgrG protein 1846 9 042 alignment trimmed tree collapsed 0.006 0.595
2411 167 VgrG protein 1
2412 167 Uncharacterized protein ImpH/VasB 8 55989 alignment trimmed tree collapsed 0.003 0.612
2413 167 Protein ImpG/VasA 5514 1549 3138 130 042 alignment trimmed tree collapsed 2.721 2.914
2414 167 FIG00642671: hypothetical protein 3139 3 042 alignment trimmed tree collapsed 0.000 0.707
2415 167 Uncharacterized protein ImpC 1551 3140 66 55989 alignment trimmed tree collapsed 1.220 2.331
2416 167 Uncharacterized protein ImpB 2263 5519 650 1553 138 55989 alignment trimmed tree collapsed 1.715 2.675
2417 168 reverse transcriptase-like protein 699 976 1196 1211 1226 4205 97 ED1a alignment trimmed tree collapsed 0.000 0.474
2418 169 Transposase 458 1209 1701 2514 2580 3418 4780 5370 4512 4816 358 MS 119-7 alignment trimmed tree collapsed 0.001 0.655
2419 169 COG1272: Predicted membrane protein hemolysin III homolog 1492 129 SE11 alignment trimmed tree collapsed 0.000 0.245
2420 169 Protein HI1394 1491 134 SMS-3-5 alignment trimmed tree collapsed 0.001 0.194
2421 169 6-phospho-beta-glucosidase (EC 3.2.1.86) 1608 2579 4287 1490 2868 3353 4363 407 55989 alignment trimmed tree collapsed 2.325 0.537
2422 169 Putative oxidoreductase 972 2654 4050 1200 1489 2956 4594 441 55989 alignment trimmed tree collapsed 2.546 1.326
2423 169 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) 3151 133 55989 alignment trimmed tree collapsed 0.001 0.187
2424 169 Glycine cleavage system H protein 3150 133 B171 alignment trimmed tree collapsed 0.008 0.577
2425 169 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) 3149 136 TA271 alignment trimmed tree collapsed 0.000 0.133
2426 169 FIG00639927: hypothetical protein 17 1212A alignment trimmed tree collapsed 0.022 0.705
2427 169 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC 1.14.13.-) 2428 5017 5360 2115 4364 4878 4879 488 MS 78-1 alignment trimmed tree collapsed 1.816 0.922
2428 169 2-octaprenyl-6-methoxyphenol hydroxylase (EC 1.14.13.-) 2427 5017 2115 4878 4879 395 E110019 alignment trimmed tree collapsed 0.038 1.226
2429 169 Xaa-Pro aminopeptidase (EC 3.4.11.9) 4877 132 MS 124-1 alignment trimmed tree collapsed 0.000 0.015
2430 169 FIG001590: Putative conserved exported protein precursor 4876 129 MS 107-1 alignment trimmed tree collapsed 0.000 0.187
2431 169 Z-ring-associated protein ZapA 4875 123 EC4100B alignment trimmed tree collapsed 0.000 0.091
2432 169 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 4874 132 O157:H7 str. EC4486 alignment trimmed tree collapsed 0.000 0.637
2433 169 hypothetical protein 4873 24 O111:H- str. 11128 alignment trimmed tree 0.000 0.000
2434 169 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) 3337 132 MS 124-1 alignment trimmed tree collapsed 0.000 0.344
2435 169 FIG00644009: hypothetical protein 6 M718 alignment trimmed tree 0.000 0.000
2436 169 Ribose 5-phosphate isomerase A (EC 5.3.1.6) 3336 133 APEC O1 alignment trimmed tree collapsed 0.000 0.130
2437 169 hypothetical protein 124 B185 alignment trimmed tree collapsed 0.034 0.330
2438 169 Chromosome initiation inhibitor 3334 179 F11 alignment trimmed tree collapsed 0.000 0.575
2439 169 Methylmalonyl-CoA mutase (EC 5.4.99.2) 3333 130 W alignment trimmed tree collapsed 0.008 0.772
2440 169 Methylmalonyl-CoA mutase (EC 5.4.99.2) 3333 103 53638 alignment trimmed tree collapsed 0.000 0.818
2441 169 putative periplasmic protein kinase ArgK and related GTPases of G3E family 3332 103 53638 alignment trimmed tree collapsed 0.004 0.870
2442 169 Methylmalonyl-CoA decarboxylase (EC 4.1.1.41) 3341 4134 2133 3331 3634 380 TA280 alignment trimmed tree collapsed 2.388 0.539
2443 169 Acetyl-CoA hydrolase (EC 3.1.2.1) 94 55989 alignment trimmed tree collapsed 0.009 3.321
2444 169 putative LYSR-type transcriptional regulator 3330 105 042 alignment trimmed tree collapsed 0.004 0.708
2445 169 hypothetical protein 3329 10 MS 21-1 alignment trimmed tree 0.000 0.000
2446 169 Protein of unknown function DUF541 3328 133 O157:H7 EDL933 alignment trimmed tree collapsed 0.000 0.536
2447 169 Transporter, LysE family 3327 134 MS 115-1 alignment trimmed tree collapsed 0.001 0.462
2448 169 Transporter, LysE family 3327 131 BL21(DE3) alignment trimmed tree collapsed 0.015 3.865
2449 169 Protein involved in stability of MscS mechanosensitive channel 4918 1833 3326 267 E110019 alignment trimmed tree collapsed 1.653 0.186
2450 169 Fructose-bisphosphate aldolase class II (EC 4.1.2.13) 1719 757 2748 3325 385 BW2952 alignment trimmed tree collapsed 0.000 1.401
2451 169 Phosphoglycerate kinase (EC 2.7.2.3) 3009 133 DH1 alignment trimmed tree collapsed 0.003 0.520
2452 169 D-erythrose-4-phosphate dehydrogenase (EC 1.2.1.72) 3847 4155 287 3008 3617 380 O157:H7 str. Sakai alignment trimmed tree collapsed 0.000 0.855
2453 169 Predicted regulator of STY3230 transporter operon 3007 100 EC4100B alignment trimmed tree collapsed 0.015 0.709
2454 169 Substrate-specific component STY3230 of queuosine-regulated ECF transporter 3006 100 B185 alignment trimmed tree collapsed 0.006 0.880
2455 169 Transmembrane component STY3231 of energizing module of queuosine-regulated ECF transporter 3005 101 E24377A alignment trimmed tree collapsed 0.018 0.286
2456 169 ATPase component STY3232 of energizing module of queuosine-regulated ECF transporter 4231 5141 1400 2697 3004 287 55989 alignment trimmed tree collapsed 1.598 0.972
2457 169 ATPase component STY3233 of energizing module of queuosine-regulated ECF transporter 1857 2032 2048 2065 2837 2976 3086 3223 4082 4265 4444 4701 4710 4726 4732 4790 4919 5003 5194 5279 5555 5718 4 283 418 450 497 1438 1802 1815 1834 1873 1890 1905 2082 2517 2615 2889 2929 3003 3242 3838 3847 4573 4758 4790 3321 B7A alignment trimmed tree collapsed 2.603 1.085
2458 169 Uridine kinase family protein YggC homolog 3002 132 MS 84-1 alignment trimmed tree collapsed 0.067 0.825
2459 169 Putative transcriptional regulator 1474 3001 4155 252 APEC O1 alignment trimmed tree collapsed 1.659 1.222
2460 169 Uncharacterized protein yggF 1341 1145 3000 241 O26:H11 str. 11368 alignment trimmed tree collapsed 0.661 0.983
2461 169 Putative oxidoreductase linked to yggC 2999 198 TA271 alignment trimmed tree collapsed 0.020 0.747
2462 169 PTS system, mannitol-specific cryptic IIB component (EC 2.7.1.69) / PTS system, mannitol-specific cryptic IIC component (EC 2.7.1.69) 1472 2998 4157 257 55989 alignment trimmed tree collapsed 0.721 0.986
2463 169 PTS system, mannitol-specific cryptic IIA component (EC 2.7.1.69) 667 893 1472 3247 516 2997 3714 4157 573 MS 187-1 alignment trimmed tree collapsed 2.262 0.624
2464 169 Transketolase (EC 2.2.1.1) 2875 2996 4409 254 TA271 alignment trimmed tree collapsed 0.002 0.677
2465 169 Putative metalloprotease yggG (EC 3.4.24.-) 2913 3913 4759 1612 2510 502 B088 alignment trimmed tree collapsed 1.666 1.037
2466 169 Agmatinase (EC 3.5.3.11) 2511 134 KO11 alignment trimmed tree collapsed 0.007 1.594
2467 169 hypothetical protein 2512 105 MS 107-1 alignment trimmed tree collapsed 0.008 0.507
2468 169 Biosynthetic arginine decarboxylase (EC 4.1.1.19) 2513 133 B7A alignment trimmed tree collapsed 0.000 0.489
2469 169 Hypothetical protein yqgB 2514 132 MS 124-1 alignment trimmed tree collapsed 0.000 0.271
2470 169 hypothetical protein 26 1827-70 alignment trimmed tree 0.000 0.000
2471 169 hypothetical protein 100 O26:H11 str. 11368 alignment trimmed tree collapsed 0.000 0.569
2472 169 S-adenosylmethionine synthetase (EC 2.5.1.6) 2516 143 str. K-12 substr. DH10B alignment trimmed tree collapsed 0.000 0.275
2473 169 Arabinose-proton symporter 1065 2738 967 2933 4264 349 1827-70 alignment trimmed tree collapsed 1.552 0.592
2474 169 Arabinose-proton symporter 2738 967 4264 268 E110019 alignment trimmed tree collapsed 0.497 0.445
2475 169 Protein sprT 4263 134 E2348/69 alignment trimmed tree collapsed 0.000 0.876
2476 169 Extracellular deoxyribonuclease Dns (EC 3.1.21.-) 4549 132 042 alignment trimmed tree collapsed 0.044 0.533
2477 169 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) 4550 130 B171 alignment trimmed tree collapsed 0.005 0.696
2478 169 Glutathione synthetase (EC 6.3.2.3) 4551 133 MS 175-1 alignment trimmed tree collapsed 0.000 0.578
2479 169 UPF0301 protein YqgE 4552 129 str. K-12 substr. DH10B alignment trimmed tree collapsed 0.000 0.166
2480 169 Putative Holliday junction resolvase (EC 3.1.-.-) 4553 131 WV_060327 alignment trimmed tree collapsed 0.015 0.665
2481 169 Twitching motility protein PilT 4554 131 HS alignment trimmed tree collapsed 0.014 2.146
2482 169 Hypothetical protein YggS, proline synthase co-transcribed bacterial homolog PROSC 4555 133 HS alignment trimmed tree collapsed 0.000 0.607
2483 169 Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock) 4556 129 O157:H7 str. TW14359 alignment trimmed tree collapsed 0.000 0.277
2484 169 UPF0235 protein VC0458 4557 134 E22 alignment trimmed tree collapsed 0.011 0.749
2485 169 Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) 4558 134 MS 115-1 alignment trimmed tree collapsed 0.021 0.464
2486 169 Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB 4559 133 B088 alignment trimmed tree collapsed 0.026 1.474
2487 169 Putative alpha helix chain 4560 132 MS 107-1 alignment trimmed tree collapsed 0.018 0.755
2488 169 L-asparaginase (EC 3.5.1.1) 4561 130 MS 119-7 alignment trimmed tree collapsed 0.006 0.921
2489 169 FIG004016: Uncharacterized protein YggN 4562 133 O157:H7 str. Sakai alignment trimmed tree collapsed 0.000 0.247
2490 169 hypothetical protein 4563 124 H591 alignment trimmed tree collapsed 0.091 0.527
2491 169 FIG002060: uncharacterized protein YggL 4564 133 E24377A alignment trimmed tree collapsed 0.010 0.874
2492 169 tRNA (guanine46-N7-)-methyltransferase (EC 2.1.1.33) 4565 133 FVEC1302 alignment trimmed tree collapsed 0.006 0.746
2493 169 A/G-specific adenine glycosylase (EC 3.2.2.-) 6 042 alignment trimmed tree collapsed 0.012 1.634
2494 169 FIG001341: Probable Fe(2+)-trafficking protein YggX 4568 134 1827-70 alignment trimmed tree collapsed 0.000 0.198
2495 169 Membrane-bound lytic murein transglycosylase C precursor (EC 3.2.1.-) 641 128 MS 196-1 alignment trimmed tree collapsed 0.003 0.156
2496 169 hypothetical protein 640 43 53638 alignment trimmed tree collapsed 0.000 0.563
2497 169 Nucleoside permease NupG 3179 21 639 2750 320 042 alignment trimmed tree collapsed 0.006 1.059
2498 169 Ornithine decarboxylase (EC 4.1.1.17) 5038 638 2006 261 E22 alignment trimmed tree collapsed 0.510 1.083
2499 169 Putative inner membrane protein YqgA 637 127 MS 196-1 alignment trimmed tree collapsed 0.016 0.560
2500 169 Integrase 393 832 3509 5408 1533 3044 3503 4073 455 55989 alignment trimmed tree collapsed 1.717 0.888
2501 169 FIG00639313: hypothetical protein 1365 24 55989 alignment trimmed tree collapsed 0.000 0.384
2502 169 probable lipoprotein YPO0703 17 042 alignment trimmed tree collapsed 0.010 0.252
2503 169 FIG00641298: hypothetical protein 1363 6 E24377A alignment trimmed tree 0.000 0.000
2504 169 RNA polymerase associated protein RapA (EC 3.6.1.-) 1
2505 169 RNA polymerase associated protein RapA (EC 3.6.1.-) 14 55989 alignment trimmed tree collapsed 1.199 0.913
2506 169 Cell division protein FtsH (EC 3.4.24.-) 4851 10 E24377A alignment trimmed tree collapsed 0.000 0.500
2507 169 putative serine protease 4850 6 042 alignment trimmed tree collapsed 0.001 0.707
2508 169 Type III restriction-modification system methylation subunit (EC 2.1.1.72) 4849 6 E24377A alignment trimmed tree collapsed 0.000 0.447
2509 169 Type III restriction-modification enzyme helicase subunit 4848 8 042 alignment trimmed tree collapsed 0.000 0.095
2510 169 Type III restriction-modification enzyme helicase subunit 4848 8 E24377A alignment trimmed tree collapsed 0.000 0.577
2511 169 IS911 orfA 3495 103 CFT073 alignment trimmed tree collapsed 0.000 0.412
2512 169 IS30 transposase 1
2513 169 putative reverse transcriptase 288 696 3060 1274 233 FVEC1302 alignment trimmed tree collapsed 1.530 1.153
2514 169 Transposase 1209 42 UTI89 alignment trimmed tree collapsed 0.014 0.644
2515 169 Transposase 15 55989 alignment trimmed tree collapsed 0.002 0.865
2516 169 Insertion Sequence Associated 115 209 681 714 3560 4167 4487 4544 4627 734 042 alignment trimmed tree collapsed 0.094 0.388
2517 169 FIG00641131: hypothetical protein 210 682 979 3445 4488 452 FVEC1302 alignment trimmed tree collapsed 1.979 1.164
2518 169 Transposase 116 207 680 713 981 991 1220 4166 4214 4602 4603 760 O157:H7 str. EC4196 alignment trimmed tree collapsed 1.757 0.652
2519 169 COG3328: Transposase and inactivated derivatives 1221 2552 111 EC4100B alignment trimmed tree collapsed 0.070 0.302
2520 169 Per-activated serine protease autotransporter enterotoxin EspC 42 042 alignment trimmed tree collapsed 1.263 0.605
2521 169 Serine protease pic precursor (EC 3.4.21.-) 827 1224 78 042 alignment trimmed tree collapsed 1.002 0.264
2522 169 hypothetical protein 1
2523 170 Type III secretion inner membrane protein (YscT,HrcT,SpaR,EscT,EpaR1,homologous to flagellar export components) 2130 54 MS 124-1 alignment trimmed tree collapsed 0.016 0.096
2524 170 Surface presentation of antigens protein SpaQ 2129 79 MS 84-1 alignment trimmed tree collapsed 0.025 0.441
2525 170 Type III secretion inner membrane protein (YscQ,homologous to flagellar export components) 1
2526 170 Uncharacterized protein YgeP 3011 38 55989 alignment trimmed tree collapsed 0.005 0.559
2527 170 Uncharacterized lipoprotein YgeR precursor 128 042 alignment trimmed tree collapsed 0.000 0.642
2528 170 Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4) 2543 249 344 W alignment trimmed tree collapsed 0.007 0.985
2529 170 Xanthine dehydrogenase, FAD binding subunit (EC 1.17.1.4) 5432 248 738 223 HS alignment trimmed tree collapsed 1.526 0.826
2530 170 Xanthine dehydrogenase iron-sulfur subunit (EC 1.17.1.4) 2543 5433 247 737 344 IAI1 alignment trimmed tree collapsed 1.686 1.338
2531 170 Uncharacterized sigma-54-dependent transcriptional regulator YgeV 130 HS alignment trimmed tree collapsed 0.014 0.993
2532 170 Aspartate/ornithine carbamoyltransferase family protein protein YgeW 586 129 O157:H7 str. EC4206 alignment trimmed tree collapsed 0.003 0.140
2533 170 Putative diaminopropionate ammonia-lyase (EC 4.3.1.15) 585 129 H299 alignment trimmed tree collapsed 0.000 0.677
2534 170 Putative deacetylase YgeY 584 132 MS 107-1 alignment trimmed tree collapsed 0.000 1.238
2535 170 Hypothetical hydrolase YgeZ (EC 3.-.-.-) 583 130 55989 alignment trimmed tree collapsed 0.020 0.156
2536 170 Carbamate kinase-like protein YqeA 5227 5471 206 582 1697 459 EC4100B alignment trimmed tree collapsed 1.098 0.719
2537 170 Uncharacterized protein YqeB 581 129 55989 alignment trimmed tree collapsed 0.008 0.180
2538 170 Uncharacterized protein YqeC 580 132 str. K-12 substr. DH10B alignment trimmed tree collapsed 0.032 0.119
2539 170 CTP:molybdopterin cytidylyltransferase 1263 579 4104 163 E22 alignment trimmed tree collapsed 0.016 0.493
2540 170 Predicted oxidoreductase, Fe-S subunit 578 128 55989 alignment trimmed tree collapsed 0.011 0.964
2541 170 SsnA protein 577 128 O111:H- str. 11128 alignment trimmed tree collapsed 0.012 1.206
2542 170 Uncharacterized protein YgfM 576 133 H591 alignment trimmed tree collapsed 0.000 0.757
2543 170 Possible hypoxanthine oxidase XdhD (EC 1.-.-.-) 127 B7A alignment trimmed tree collapsed 0.006 0.519
2544 170 Putative purine permease YgfO 1535 575 2723 264 042 alignment trimmed tree collapsed 0.003 1.323
2545 170 Guanine deaminase (EC 3.5.4.3) 129 O127:H6 str. E2348/69 alignment trimmed tree collapsed 0.000 1.230
2546 170 Uncharacterized protein YgfQ 1107 1547 1600 342 1510 2109 464 E2348/69 alignment trimmed tree collapsed 1.290 0.779
2547 170 Predicted oxidoreductase, Fe-S subunit 1307 1653 2549 2575 2592 2879 2897 3635 3730 4220 4743 122 772 1508 1509 1929 2412 2706 3266 3907 4359 4413 1482 ETEC H10407 alignment trimmed tree collapsed 1.872 0.841
2548 170 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) 1801 2540 2879 3220 494 578 885 1508 4413 693 OP50 alignment trimmed tree collapsed 2.128 0.442
2549 170 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) 2879 1508 4413 211 55989 alignment trimmed tree collapsed 0.017 0.573
2550 170 Xanthine permease 1507 91 042 alignment trimmed tree collapsed 0.003 1.515
2551 170 hypothetical protein 5 F11 alignment trimmed tree 0.000 0.000
2552 170 Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) 1505 136 55989 alignment trimmed tree collapsed 0.045 0.187
2553 170 Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) 3979 260 IAI1 alignment trimmed tree collapsed 0.134 0.103
2554 170 Peptide chain release factor 2; programmed frameshift-containing 1502 146 O103:H2 str. 12009 alignment trimmed tree collapsed 0.000 0.147
2555 170 hypothetical protein 1501 111 BW2952 alignment trimmed tree collapsed 0.000 0.424
2556 170 Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) 1500 126 55989 alignment trimmed tree collapsed 0.013 0.065
2557 170 Thiol:disulfide interchange protein DsbC 1499 136 B088 alignment trimmed tree collapsed 0.014 0.147
2558 170 Tyrosine recombinase XerD 1433 1498 3158 309 M718 alignment trimmed tree collapsed 2.516 0.461
2559 170 Flavodoxin 2 5032 1497 2000 257 str. K-12 substr. MG1655 alignment trimmed tree collapsed 0.000 0.977
2560 170 Putative inner membrane protein 1496 133 EC4100B alignment trimmed tree collapsed 0.024 1.468
2561 170 YgfY COG2938 1495 134 MS 124-1 alignment trimmed tree collapsed 0.000 0.175
2562 170 hypothetical protein 1494 120 str. K-12 substr. DH10B alignment trimmed tree collapsed 0.025 0.075
2563 170 Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress 1493 132 BL21 alignment trimmed tree collapsed 0.000 0.873
2564 171 PTS system, glucitol/sorbitol-specific IIC component (EC 2.7.1.69) 85 102 F11 alignment trimmed tree collapsed 0.006 0.555
2565 171 PTS system, glucitol/sorbitol-specific IIB component and second of two IIC components (EC 2.7.1.69) 84 108 SE11 alignment trimmed tree collapsed 0.023 0.184
2566 171 PTS system, glucitol/sorbitol-specific IIA component (EC 2.7.1.69) 83 130 B str. REL606 alignment trimmed tree collapsed 0.000 0.781
2567 171 Sorbitol-6-phosphate 2-dehydrogenase (EC 1.1.1.140) 953 972 2348 2422 2654 2739 2841 3212 3668 5287 82 412 1200 1313 1489 1793 2014 4463 4594 4678 1436 W alignment trimmed tree collapsed 2.261 1.311
2568 171 Glucitol operon activator protein 81 129 B171 alignment trimmed tree collapsed 0.009 0.999
2569 171 Glucitol operon repressor 675 888 1285 1711 2003 2605 4045 80 666 749 1130 2742 2961 3206 4389 4620 1047 E110019 alignment trimmed tree collapsed 0.008 0.714
2570 171 Glucitol operon GutQ protein 1783 868 305 55989 alignment trimmed tree collapsed 0.004 0.331
2571 171 Functional role page for Anaerobic nitric oxide reductase transcription regulator NorR 4277 121 55989 alignment trimmed tree collapsed 0.025 1.621
2572 171 Anaerobic nitric oxide reductase flavorubredoxin 4278 123 55989 alignment trimmed tree collapsed 0.007 0.631
2573 171 Nitric oxide reductase FlRd-NAD(+) reductase (EC 1.18.1.-) 4279 132 KO11 alignment trimmed tree collapsed 0.006 1.290
2574 171 [NiFe] hydrogenase metallocenter assembly protein HypF 114 B088 alignment trimmed tree collapsed 0.027 1.513
2575 171 Electron transport protein HydN 1307 1653 2341 2547 2549 2592 2879 2897 3730 4220 122 600 1508 1509 1929 2412 2706 3266 3907 4359 4413 1329 APEC O1 alignment trimmed tree collapsed 1.188 1.147
2576 171 hypothetical protein 4360 114 O157:H7 str. TW14359 alignment trimmed tree collapsed 0.000 0.108
2577 171 AscBF operon repressor 1350 2021 2734 3225 4084 5358 499 963 1436 1745 1942 4011 4361 882 55989 alignment trimmed tree collapsed 0.009 0.582
2578 171 PTS system, arbutin-, cellobiose-, and salicin-specific IIBC component (EC 2.7.1.69) 4362 139 IAI1 alignment trimmed tree collapsed 0.013 0.453
2579 171 6-phospho-beta-glucosidase ascB (EC 3.2.1.86) 1608 2421 4287 1490 2868 3353 4363 407 55989 alignment trimmed tree collapsed 0.815 0.158
2580 171 Transposase 3418 4780 5370 4816 249 O103:H2 str. 12009 alignment trimmed tree collapsed 0.000 0.262
2581 171 Putative cytoplasmic protein 2236 2421 2798 173 B354 alignment trimmed tree collapsed 0.010 1.442
2582 171 hypothetical protein 34 CFT073 alignment trimmed tree collapsed 0.000 0.544
2583 171 putative exported protein 2420 31 55989 alignment trimmed tree collapsed 0.183 1.222
2584 171 Coenzyme F420 hydrogenase maturation protease (EC 3.4.24.-) 2419 133 MS 107-1 alignment trimmed tree collapsed 0.000 0.076
2585 171 Formate hydrogenlyase maturation protein hycH 2908 2418 3915 227 MS 182-1 alignment trimmed tree collapsed 0.942 0.864
2586 171 Formate hydrogenlyase subunit 7 2907 2417 3914 215 UM146 alignment trimmed tree collapsed 0.000 0.784
2587 171 Formate hydrogenlyase complex 3 iron-sulfur protein; Formate hydrogenlyase subunit 6; Ni,Fe-hydrogenase III medium subunit 2906 2416 3913 227 MS 115-1 alignment trimmed tree collapsed 0.029 0.775
2588 171 Formate hydrogenlyase subunit 5 2905 2415 233 ETEC H10407 alignment trimmed tree collapsed 0.003 0.828
2589 171 Formate hydrogenlyase subunit 4 2414 3909 234 55989 alignment trimmed tree collapsed 0.916 0.723
2590 171 Formate hydrogenlyase subunit 4 1
2591 171 Formate hydrogenlyase subunit 3 2413 129 O103:H2 str. 12009 alignment trimmed tree collapsed 0.008 0.470
2592 171 Formate hydrogenlyase subunit 2 1118 2341 2575 600 2295 2412 4359 635 E110019 alignment trimmed tree collapsed 1.191 1.105
2593 171 Formate hydrogenlyase regulatory protein HycA 2411 130 MS 196-1 alignment trimmed tree collapsed 0.007 0.578
2594 171 [NiFe] hydrogenase nickel incorporation protein HypA 2336 595 2410 266 IAI39 alignment trimmed tree collapsed 0.839 0.881
2595 171 [NiFe] hydrogenase nickel incorporation-associated protein HypB 2409 133 O111:H- str. 11128 alignment trimmed tree collapsed 0.004 1.225
2596 171 [NiFe] hydrogenase metallocenter assembly protein HypC 2335 594 2408 267 MS 69-1 alignment trimmed tree collapsed 0.497 0.614
2597 171 [NiFe] hydrogenase metallocenter assembly protein HypD 2407 132 B171 alignment trimmed tree collapsed 0.006 1.162
2598 171 [NiFe] hydrogenase metallocenter assembly protein HypE 2406 134 O55:H7 str. CB9615 alignment trimmed tree collapsed 0.013 0.258
2599 171 Formate hydrogenlyase transcriptional activator 91 B7A alignment trimmed tree collapsed 0.000 1.399
2600 171 hypothetical protein 3210 134 str. K-12 substr. MG1655 alignment trimmed tree collapsed 0.009 1.494
2601 171 FIG00638522: hypothetical protein 3209 107 KO11 alignment trimmed tree collapsed 0.127 0.435
2602 171 DNA mismatch repair protein MutS 3208 133 55989 alignment trimmed tree collapsed 0.005 0.471
2603 171 DNA mismatch repair protein MutS 3208 130 M718 alignment trimmed tree collapsed 0.004 2.868
2604 171 Serine/threonine protein phosphatase 2 (EC 3.1.3.16) 3923 2257 3207 344 55989 alignment trimmed tree collapsed 1.239 0.038
2605 171 Putative transcriptional regulator YgbI, DeoR family 675 888 1285 1711 2003 2569 4045 80 666 749 1130 2742 2961 3206 4389 4620 1018 E24377A alignment trimmed tree collapsed 3.005 0.188
2606 171 D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) 1704 5214 668 742 3205 499 E24377A alignment trimmed tree collapsed 1.946 1.053
2607 171 Predicted pyridoxine biosynthesis protein (probably from glycolaldehide) 3204 109 MS 124-1 alignment trimmed tree collapsed 0.010 0.572
2608 171 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 896 2696 3203 3811 4862 353 MS 84-1 alignment trimmed tree collapsed 0.005 1.479
2609 171 Hydroxypyruvate isomerase (EC 5.3.1.22) 5213 3202 4893 229 MS 84-1 alignment trimmed tree collapsed 1.323 0.974
2610 171 Gluconate permease 3 ED1a alignment trimmed tree collapsed 1.367 1.414
2611 171 Gluconate permease 730 971 1993 2019 42 1199 1747 2685 3201 609 55989 alignment trimmed tree collapsed 1.998 1.617
2612 171 Hydroxyaromatic non-oxidative decarboxylase protein D (EC 4.1.1.-) 3200 78 55989 alignment trimmed tree collapsed 0.066 1.709
2613 171 Hydroxyaromatic non-oxidative decarboxylase protein C (EC 4.1.1.-) 1254 794 3199 205 55989 alignment trimmed tree collapsed 1.585 1.352
2614 171 COG0163: 3-polyprenyl-4-hydroxybenzoate decarboxylase 3393 3111 3198 210 KO11 alignment trimmed tree collapsed 0.000 1.305
2615 171 Transcriptional regulator, MarR family 3197 112 B171 alignment trimmed tree collapsed 0.045 0.708
2616 171 RNA polymerase sigma factor RpoS 3196 113 APEC O1 alignment trimmed tree collapsed 0.000 0.413
2617 171 Lipoprotein NlpD 2527 3195 265 str. K-12 substr. MG1655 alignment trimmed tree collapsed 0.000 0.674
2618 171 Lipoprotein NlpD 3195 2 alignment trimmed
2619 171 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) 3194 132 M605 alignment trimmed tree collapsed 0.000 0.177
2620 171 5-nucleotidase SurE (EC 3.1.3.5) 3193 133 O157:H7 str. EC4486 alignment trimmed tree collapsed 0.005 0.351
2621 171 tRNA pseudouridine 13 synthase (EC 4.2.1.-) 3192 134 55989 alignment trimmed tree collapsed 0.007 0.117
2622 171 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) 3191 134 MS 107-1 alignment trimmed tree collapsed 0.000 0.463
2623 171 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) 3190 132 MS 198-1 alignment trimmed tree collapsed 0.000 0.142
2624 171 Cell division protein FtsB 3189 135 M718 alignment trimmed tree collapsed 0.000 0.244
2625 171 FIG00639982: hypothetical protein 44 F11 alignment trimmed tree collapsed 0.025 0.467
2626 171 Putative cytochrome oxidase subunit 3188 130 SMS-3-5 alignment trimmed tree collapsed 0.010 0.604
2627 171 Adenylylsulfate kinase (EC 2.7.1.25) 3187 133 str. K-12 substr. DH10B alignment trimmed tree collapsed 0.005 0.686
2628 171 Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) 3186 133 IAI1 alignment trimmed tree collapsed 0.003 0.425
2629 171 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) 3185 134 O157:H7 str. EC4113 alignment trimmed tree collapsed 0.000 0.400
2630 171 Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4) 3185 132 IAI39 alignment trimmed tree collapsed 0.009 2.678
2631 171 Alkaline phosphatase isozyme conversion protein precursor (EC 3.4.11.-) 3184 133 55989 alignment trimmed tree collapsed 0.007 0.926
2632 171 FIG00638768: hypothetical protein 3183 57 55989 alignment trimmed tree collapsed 0.626 0.056
2633 171 CRISPR-associated protein, Cas2 3182 65 W alignment trimmed tree collapsed 0.011 0.029
2634 171 CRISPR-associated protein Cas1 3181 86 EC4100B alignment trimmed tree collapsed 0.010 0.529
2635 171 CRISPR-associated protein, CT1974 3180 87 EC4100B alignment trimmed tree collapsed 0.073 0.416
2636 171 CRISPR-associated protein, CT1976 3179 74 55989 alignment trimmed tree collapsed 0.081 0.473
2637 171 CRISPR-associated protein, CT1975 family 3178 69 55989 alignment trimmed tree collapsed 0.054 0.127
2638 171 Transposase 3177 74 E24377A alignment trimmed tree collapsed 0.028 0.926
2639 171 corresponds to STY3070 from Accession AL513382: Salmonella typhi CT18 3176 71 E24377A alignment trimmed tree collapsed 0.012 0.382
2640 171 CRISPR-associated helicase Cas3, protein 3175 74 E22 alignment trimmed tree collapsed 0.034 0.504
2641 171 CRISPR-associated helicase Cas3, protein 3175 85 55989 alignment trimmed tree collapsed 0.108 0.440
2642 171 HokE protein 1633 5270 5272 2177 404 SE15 alignment trimmed tree collapsed 0.255 0.665
2643 171 Phosphoadenylyl-sulfate reductase [thioredoxin] (EC 1.8.4.8) 4583 133 W alignment trimmed tree collapsed 0.009 0.247
2644 171 Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) 4584 132 O157:H7 str. EC4042 alignment trimmed tree collapsed 0.004 0.869
2645 171 Sulfite reductase [NADPH] flavoprotein alpha-component (EC 1.8.1.2) 4585 127 55989 alignment trimmed tree collapsed 0.011 0.524
2646 171 Queuosine biosynthesis QueD, PTPS-I 4586 130 042 alignment trimmed tree collapsed 0.000 0.209
2647 171 Probable electron transfer flavoprotein-quinone oxidoreductase YgcN (EC 1.5.5.-) 3759 5601 1586 2470 4587 384 55989 alignment trimmed tree collapsed 1.326 1.422
2648 171 Ferredoxin-like protein YgcO 3760 5602 1585 2469 4588 387 ATCC 8739 alignment trimmed tree collapsed 1.132 1.592
2649 171 Putative anti-terminator regulatory protein 4589 125 SE11 alignment trimmed tree collapsed 0.000 0.108
2650 171 putative flavoprotein 98 W alignment trimmed tree collapsed 0.043 0.815
2651 171 Putative electron transfer flavoprotein subunit ygcR 4591 125 DH1 alignment trimmed tree collapsed 0.144 0.619
2652 171 Inner membrane metabolite transport protein YgcS 3837 3843 5603 291 297 1584 4264 4592 586 101-1 alignment trimmed tree collapsed 0.024 1.011
2653 171 Predicted FAD containing dehydrogenase 4593 123 B088 alignment trimmed tree collapsed 0.000 0.098
2654 171 Hypothetical oxidoreductase YgcW (EC 1.-.-.-) 953 972 2348 2422 2567 2739 2841 2969 3212 3668 4026 4050 5287 82 412 1200 1313 1489 1793 1983 2014 2609 2956 4463 4594 4678 1975 E22 alignment trimmed tree collapsed 3.624 0.568
2655 171 Inner membrane protein YqcE 1284 665 114 UM146 alignment trimmed tree collapsed 1.553 7.429
2656 171 Inner membrane protein YqcE 4016 159 MS 84-1 alignment trimmed tree collapsed 0.006 0.534
2657 171 Uncharacterized sugar kinase YgcE (EC 2.7.1.-) 4015 121 KO11 alignment trimmed tree collapsed 0.015 0.270
2658 171 FIG00640554: hypothetical protein 3323 68 55989 alignment trimmed tree collapsed 4.001 0.424
2659 171 FIG00639362: hypothetical protein 3322 101 55989 alignment trimmed tree collapsed 2.807 0.284
2660 171 FIG00641525: hypothetical protein 2203 33 SE11 alignment trimmed tree collapsed 0.273 0.054
2661 171 Queuosine Biosynthesis QueE Radical SAM 2266 127 B str. REL606 alignment trimmed tree collapsed 0.010 0.887
2662 171 hypothetical protein 47 E24377A alignment trimmed tree collapsed 0.000 0.389
2663 171 Uncharacterized protein YgcG 0
2664 171 hypothetical protein 3835 13 HS alignment trimmed tree collapsed 0.000 0.427
2665 171 Enolase (EC 4.2.1.11) 121 SE15 alignment trimmed tree collapsed 0.000 0.132
2666 171 CTP synthase (EC 6.3.4.2) 3832 127 str. K-12 substr. DH10B alignment trimmed tree collapsed 0.000 0.311
2667 171 Nucleoside triphosphate pyrophosphohydrolase MazG 3831 129 FVEC1412 alignment trimmed tree collapsed 0.000 0.502
2668 171 Nucleoside triphosphate pyrophosphohydrolase MazG 3831 129 FVEC1412 alignment trimmed tree collapsed 0.021 0.085
2669 171 Programmed cell death toxin MazF 3830 110 E24377A alignment trimmed tree collapsed 0.014 1.092
2670 171 Programmed cell death antitoxin MazE 922 3829 143 O157:H7 str. EC4045 alignment trimmed tree collapsed 0.000 0.632
2671 171 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I 3828 119 O26:H11 str. 11368 alignment trimmed tree collapsed 0.002 0.398
2672 171 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) 1000 4705 3570 3827 3842 397 SE11 alignment trimmed tree collapsed 1.660 0.868
2673 171 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) 1
2674 171 BarA sensory histidine kinase (= VarS = GacS) 3826 130 MS 115-1 alignment trimmed tree collapsed 0.009 11.358
2675 171 hypothetical protein 654 1681 4639 10 H299 alignment trimmed tree collapsed 0.176 0.676
2676 171 Insertion element IS1 protein insB 105 655 4596 4640 216 E110019 alignment trimmed tree collapsed 0.007 0.363
2677 171 BarA sensory histidine kinase (= VarS = GacS) 3826 127 101-1 alignment trimmed tree collapsed 0.002 0.606
2678 171 Glucarate dehydratase (EC 4.2.1.40) 3824 3825 225 O103:H2 str. 12009 alignment trimmed tree collapsed 0.015 0.995
2679 171 Glucarate dehydratase (EC 4.2.1.40) 2678 3824 3825 262 55989 alignment trimmed tree collapsed 0.014 1.288
2680 171 Glucarate dehydratase (EC 4.2.1.40) 2678 3824 3825 235 B171 alignment trimmed tree collapsed 0.036 0.816
2681 171 D-glucarate permease 993 1578 1706 2248 3321 700 744 2338 3576 3823 713 MS 198-1 alignment trimmed tree collapsed 2.653 0.827
2682 171 FIG00642344: hypothetical protein 41 MS 84-1 alignment trimmed tree collapsed 0.000 0.372
2683 171 hypothetical protein 3822 96 M718 alignment trimmed tree collapsed 0.000 0.146
2684 171 Hypothetical flavoprotein YqcA (clustered with tRNA pseudouridine synthase C) 1454 2645 2537 3821 4585 386 O157:H7 str. EC4206 alignment trimmed tree collapsed 1.839 1.264
2685 171 tRNA pseudouridine synthase 3820 133 KO11 alignment trimmed tree collapsed 0.008 1.725
2686 171 hypothetical protein 3022 5614 1321 1573 3820 4099 519 str. K-12 substr. DH10B alignment trimmed tree collapsed 1.727 1.153
2687 171 Hypothetical protein YqcC (clustered with tRNA pseudouridine synthase C) 3819 132 HS alignment trimmed tree collapsed 0.019 0.706
2688 171 Syd protein 3818 130 OP50 alignment trimmed tree collapsed 0.000 0.625
2689 171 NADPH dependent preQ0 reductase 3817 132 1827-70 alignment trimmed tree collapsed 0.008 1.596
2690 171 Decarboxylase family protein 3816 133 O157:H7 str. EC4113 alignment trimmed tree collapsed 0.000 0.367
2691 171 FIG00640611: hypothetical protein 23 KO11 alignment trimmed tree collapsed 0.024 1.128
2692 171 Serine transporter 1688 1693 2743 3815 3955 3960 503 O103:H2 str. 12009 alignment trimmed tree collapsed 0.000 1.267
2693 171 L-serine dehydratase (EC 4.3.1.17) 3814 3956 269 E24377A alignment trimmed tree collapsed 0.385 1.115
2694 171 DNA polymerase I (EC 2.7.7.7) 3813 128 O157:H7 str. EC869 alignment trimmed tree collapsed 0.009 0.775
2695 171 Lactaldehyde reductase (EC 1.1.1.77) 4559 3377 3812 4322 443 E22 alignment trimmed tree collapsed 1.392 0.619
2696 171 L-fuculose phosphate aldolase (EC 4.1.2.17) 2608 3203 3811 224 O103:H2 str. 12009 alignment trimmed tree collapsed 1.901 0.787
2697 171 Fucose permease 673 3810 151 IAI1 alignment trimmed tree collapsed 0.000 0.459
2698 171 L-fucose isomerase (EC 5.3.1.25) 3809 133 H591 alignment trimmed tree collapsed 0.006 0.236
2699 171 L-fuculokinase (EC 2.7.1.51) 1342 1642 1660 2657 1675 3808 4003 4015 4630 481 MS 84-1 alignment trimmed tree collapsed 0.028 0.501
2700 171 L-fuculokinase (EC 2.7.1.51) 3808 133 H591 alignment trimmed tree collapsed 0.016 1.623
2701 171 L-fucose mutarotase 3807 128 O103:H2 str. 12009 alignment trimmed tree collapsed 0.000 0.095
2702 171 L-fucose operon activator 888 1285 1711 2003 2569 2605 3169 3838 4045 80 296 666 749 1130 2742 2961 3206 3806 4389 1297 O103:H2 str. 12009 alignment trimmed tree collapsed 2.677 0.189
2703 171 Putative RNA 2'-O-ribose methyltransferase mtfA (EC 2.1.1.-) 3805 131 MS 145-7 alignment trimmed tree collapsed 0.000 0.565
2704 171 COG2363 3804 131 O83:H1 str. NRG 857C alignment trimmed tree collapsed 0.000 0.387
2705 171 Glycine cleavage system transcriptional activator GcvA 2153 4749 618 766 3803 482 MS 69-1 alignment trimmed tree collapsed 0.000 0.932
2706 171 probable lipoprotein 2729 3802 4787 262 B171 alignment trimmed tree collapsed 0.000 0.959
2707 171 Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA 3737 3801 3883 219 ETEC H10407 alignment trimmed tree collapsed 0.000 1.233
2708 171 Cysteine desulfurase CsdA-CsdE, sulfur acceptor protein CsdE 3736 3800 3884 261 55989 alignment trimmed tree collapsed 0.035 2.867
2709 171 HesA/MoeB/ThiF family protein related to EC-YgdL 3799 133 BW2952 alignment trimmed tree collapsed 0.008 1.189
2710 171 Membrane-bound lytic murein transglycosylase A precursor (EC 3.2.1.-) 3798 130 536A alignment trimmed tree collapsed 0.000 0.542
2712 171 N-acetylglutamate synthase (EC 2.3.1.1) 2908 120 O157:H7 str. TW14588 alignment trimmed tree collapsed 0.000 0.626
2713 171 Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) ## RecD 2907 133 MS 146-1 alignment trimmed tree collapsed 0.004 0.033
2714 171 Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) ## RecD 4 NC101 alignment trimmed tree collapsed 0.031 1.681
2715 171 Exodeoxyribonuclease V beta chain (EC 3.1.11.5) ## RecB 124 55989 alignment trimmed tree collapsed 0.006 0.420
2716 171 Protease III precursor (EC 3.4.24.55) 2318 128 W alignment trimmed tree collapsed 0.002 0.301
2717 171 Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) ## RecC 130 O103:H2 str. 12009 alignment trimmed tree collapsed 0.005 0.411
2718 171 FIG004136: Prepilin peptidase dependent protein C precursor 4776 133 O127:H6 str. E2348/69 alignment trimmed tree collapsed 0.046 1.993
2719 171 FIG006270: hypothetical protein 4777 128 55989 alignment trimmed tree collapsed 0.016 0.826
2720 171 FIG004819: Prepilin peptidase dependent protein B precursor 4778 133 IAI1 alignment trimmed tree collapsed 0.043 0.455
2721 171 Prepilin peptidase dependent protein A precursor 4779 130 55989 alignment trimmed tree collapsed 0.000 0.952
2722 171 Thymidylate synthase (EC 2.1.1.45) 4780 135 ABU 83972 alignment trimmed tree collapsed 0.004 0.126
2723 171 Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-) 4781 126 H591 alignment trimmed tree collapsed 0.000 0.156
2724 171 FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated 4782 128 536A alignment trimmed tree collapsed 0.002 1.122
2725 171 Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase (EC 3.6.1.-) 4783 131 F11 alignment trimmed tree 0.000 0.000
2726 171 FIG00644766: hypothetical protein 4784 37 536A alignment trimmed tree collapsed 0.074 0.502
2727 171 DNA mismatch repair endonuclease MutH 4785 127 O157:H7 str. EC4042 alignment trimmed tree collapsed 0.005 0.917
2728 171 FIG003462: membrane protein 3142 3894 1358 2834 4786 410 E24377A alignment trimmed tree collapsed 0.000 0.869
2729 171 Hypothetical lipoprotein ygdR precursor 2706 3802 4787 262 O157:H7 str. FRIK966 alignment trimmed tree collapsed 0.000 0.804
2730 171 Oxidoreductase, aldo/keto reductase family 2346 3839 4143 5557 295 605 960 990 3627 4341 4833 927 BL21 alignment trimmed tree collapsed 2.422 0.090
2731 171 Lysophospholipid transporter LplT 961 130 APEC O1 alignment trimmed tree collapsed 0.001 0.712
2732 171 2-acylglycerophosphoethanolamine acyltransferase (EC 2.3.1.40) / Acyl-[acyl-carrier-protein] synthetase (EC 6.2.1.20) 962 128 E110019 alignment trimmed tree collapsed 0.007 1.376
2733 171 hypothetical protein 13 EC4100B alignment trimmed tree 0.000 0.000
2734 171 Galactose operon repressor, GalR-LacI family of transcriptional regulators 1465 2229 2577 2778 3225 3714 5358 499 963 1860 1942 2526 3862 4361 4455 977 E22 alignment trimmed tree collapsed 2.421 0.980
2735 171 Diaminopimelate decarboxylase (EC 4.1.1.20) 964 133 W alignment trimmed tree collapsed 0.011 0.201
2736 171 Transcriptional activator protein LysR 994 2817 3641 965 3526 3575 537 IAI1 alignment trimmed tree collapsed 2.919 0.298
2737 171 Aspartate racemase (EC 5.1.1.13) 966 134 TA271 alignment trimmed tree collapsed 0.000 0.189
2738 171 Arabinose-proton symporter 967 4264 259 ATCC 8739 alignment trimmed tree collapsed 0.003 0.774
2739 171 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125) 972 2348 2422 2567 2654 2841 3212 3668 5287 82 412 1200 1313 1489 2014 4463 4594 4678 1551 O103:H2 str. 12009 alignment trimmed tree collapsed 2.112 0.433
2740 171 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17) 2013 133 O127:H6 str. E2348/69 alignment trimmed tree collapsed 0.020 4.593
2741 171 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17) 2013 132 E22 alignment trimmed tree collapsed 0.010 0.200
2742 171 Acetyl-CoA acetyltransferase (EC 2.3.1.9) 1256 3430 4137 792 2012 3495 3631 527 55989 alignment trimmed tree collapsed 1.601 1.189
2743 171 Serine transporter 1688 1693 2182 2692 3653 3815 3955 3960 636 APEC O1 alignment trimmed tree collapsed 0.000 1.083
2744 171 Uncharacterized protein YqeH 3321 94 55989 alignment trimmed tree collapsed 0.020 2.318
2745 171 FIG00644082: hypothetical protein 15 MS 84-1 alignment trimmed tree collapsed 0.056 0.555
2746 171 Putative sensory transducer 93 120 55989 alignment trimmed tree collapsed 0.016 0.555
2747 171 YqeJ protein 95 SE11 alignment trimmed tree collapsed 1.824 0.665
2748 171 hypothetical protein 94 69 O157:H7 str. EC4501 alignment trimmed tree collapsed 0.026 0.449
2749 171 FIG00642194: hypothetical protein 16 M718 alignment trimmed tree collapsed 0.027 1.246
2750 171 FIG00640113: hypothetical protein 48 MS 84-1 alignment trimmed tree collapsed 0.181 1.540
2751 171 Type III secretion chaperone protein for YopD (SycD) 80 KO11 alignment trimmed tree collapsed 0.000 0.511
2752 171 Putative invasion protein 1808 95 str. K-12 substr. DH10B alignment trimmed tree collapsed 0.034 0.456
2753 171 FIG00638088: hypothetical protein 66 O103:H2 str. 12009 alignment trimmed tree collapsed 0.145 0.678
2754 171 FIG00640521: hypothetical protein 2069 45 IAI1 alignment trimmed tree collapsed 0.000 0.667
2755 171 Hypothetical response regulatory protein ygeK 1553 2783 3276 3303 3445 5242 239 540 566 675 2394 829 O157:H7 str. FRIK2000 alignment trimmed tree collapsed 1.918 0.842
2756 171 ORF_f143 52 E24377A alignment trimmed tree collapsed 0.014 0.519
2757 171 Type III secretion bridge between inner and outermembrane lipoprotein (YscJ,HrcJ,EscJ, PscJ) 2159 63 MS 119-7 alignment trimmed tree collapsed 0.053 0.104
2758 171 Putative Type III secretion apparatus protein 2160 82 E22 alignment trimmed tree collapsed 0.014 2.039
2759 171 Type III secretion cytoplasmic protein (YscF) 2161 67 W alignment trimmed tree collapsed 0.000 0.631
2760 171 Type III secretion protein EprH 42 55989 alignment trimmed tree collapsed 0.006 0.186
2761 171 putative transcriptional regulator 11 M718 alignment trimmed tree collapsed 0.030 0.569
2762 171 Type III secretion inner membrane protein (YscU,SpaS,EscU,HrcU,SsaU, homologous to flagellar export components) 1
2763 171 Type III secretion inner membrane protein (YscU,SpaS,EscU,HrcU,SsaU, homologous to flagellar export components) 1730 139 HS alignment trimmed tree collapsed 0.019 0.849
2764 172 Phage protein 707 13 B7A alignment trimmed tree collapsed 0.000 0.289
2765 172 essential recombination function protein Erf 706 23 55989 alignment trimmed tree collapsed 0.015 0.242
2766 172 FIG00638115: hypothetical protein 705 21 O26:H11 str. 11368 alignment trimmed tree collapsed 0.000 0.411
2767 172 Phage anti-RecBCD 2 704 35 55989 alignment trimmed tree collapsed 0.011 0.045
2768 172 FIG00642748: hypothetical protein 703 48 55989 alignment trimmed tree collapsed 1.386 2.436
2769 172 Phage protein 702 20 O83:H1 str. NRG 857C alignment trimmed tree collapsed 0.020 1.080
2770 172 Phage protein 19 55989 alignment trimmed tree collapsed 0.000 0.721
2771 172 Phage protein 3869 39 CFT073 alignment trimmed tree collapsed 0.150 1.486
2772 172 Phage EaA protein 3868 40 55989 alignment trimmed tree collapsed 1.589 0.602
2773 172 Phage EaG protein 3867 8 55989 alignment trimmed tree collapsed 0.000 0.666
2774 172 Gene 18 protein 3866 32 str. K-12 substr. MG1655 alignment trimmed tree 0.000 0.000
2775 172 Sucrose permease, major facilitator superfamily 3865 77 55989 alignment trimmed tree collapsed 0.003 0.111
2776 172 Fructokinase (EC 2.7.1.4) 1286 667 3864 268 E22 alignment trimmed tree collapsed 0.682 0.254
2777 172 Sucrose-6-phosphate hydrolase (EC 3.2.1.26) 3863 87 E24377A alignment trimmed tree collapsed 0.463 0.326
2778 172 Sucrose specific transcriptional regulator CscR, LacI family 942 1350 2021 3225 5358 499 821 1745 1942 3862 4011 750 B7A alignment trimmed tree collapsed 2.809 1.090
2779 172 D-serine permease DsdX 1993 2685 3861 295 ETEC H10407 alignment trimmed tree collapsed 1.296 0.150
2780 172 D-serine dehydratase (EC 4.3.1.18) 3860 135 MS 115-1 alignment trimmed tree collapsed 0.017 0.174
2781 172 Multidrug resistance protein B 3097 3859 4768 260 B7A alignment trimmed tree collapsed 0.003 0.727
2782 172 Multidrug resistance protein A 3096 3858 4767 264 1212A alignment trimmed tree collapsed 0.764 0.341
2783 172 Positive transcription regulator EvgA 1553 3303 3445 5242 239 540 566 675 2394 781 B354 alignment trimmed tree collapsed 2.314 0.429
2784 172 Hybrid sensory histidine kinase in two-component regulatory system with EvgA 2393 132 TA271 alignment trimmed tree collapsed 0.025 3.419
2785 172 Hybrid sensory histidine kinase in two-component regulatory system with EvgA 2393 129 MS 116-1 alignment trimmed tree collapsed 0.003 0.656
2786 172 YfdE protein 5596 1591 2392 259 DH1 alignment trimmed tree collapsed 1.937 0.016
2787 172 putative receptor protein 2391 131 HS alignment trimmed tree collapsed 0.000 0.126
2788 172 Probable oxalyl-CoA decarboxylase (EC 4.1.1.8) 5638 1772 2390 259 TA280 alignment trimmed tree collapsed 1.713 0.831
2789 172 Formyl-coenzyme A transferase (EC 2.8.3.16) 2786 5596 1591 2389 2392 372 W alignment trimmed tree collapsed 0.000 1.297
2790 172 hypothetical protein 2388 131 MS 84-1 alignment trimmed tree collapsed 0.000 0.596
2791 172 FIG00640456: hypothetical protein 2387 26 B354 alignment trimmed tree collapsed 0.000 0.548
2792 172 hypothetical protein 2386 132 55989 alignment trimmed tree collapsed 0.014 0.702
2793 172 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-) 4371 278 1622 2385 2974 431 O157:H7 EDL933 alignment trimmed tree collapsed 2.184 0.612
2794 172 hypothetical protein 2384 109 MS 78-1 alignment trimmed tree collapsed 0.000 0.694
2795 172 Uncharacterized PLP-dependent aminotransferase YfdZ 2383 133 B7A alignment trimmed tree collapsed 0.003 0.730
2796 172 conserved hypothetical protein 25 MS 78-1 alignment trimmed tree collapsed 0.044 0.284
2797 172 putative sensor protein 4434 133 str. K-12 substr. MG1655 alignment trimmed tree collapsed 0.000 0.611
2798 172 Hypothetical response regulatory protein ypdB 3199 4433 4476 266 O157:H7 EDL933 alignment trimmed tree collapsed 0.005 0.776
2799 172 Putative HTH-type transcriptional regulator ypdC 1377 4432 256 BL21 alignment trimmed tree collapsed 0.008 0.951
2800 172 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) 4288 4431 260 55989 alignment trimmed tree collapsed 0.018 1.258
2801 172 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) 4513 3982 4431 213 55989 alignment trimmed tree collapsed 0.012 1.131
2802 172 Nondeblocking aminopeptidase YpdE (X-X-[^PR]- specific) 1314 1173 4430 251 KO11 alignment trimmed tree collapsed 0.006 0.671
2803 172 Aminopeptidase YpdF (MP-, MA-, MS-, AP-, NP- specific) 4429 129 MS 78-1 alignment trimmed tree collapsed 0.014 0.733
2804 172 PTS system, fructose-specific IIBC component (EC 2.7.1.69) 4428 177 KO11 alignment trimmed tree collapsed 1.608 0.601
2805 172 PTS system, fructose-specific IIABC component (EC 2.7.1.69) 1315 1373 1376 3244 4945 514 1172 2055 4291 4294 4427 726 042 alignment trimmed tree collapsed 1.607 0.145
2806 172 Glucokinase (EC 2.7.1.2) 131 O157:H7 str. EC4401 alignment trimmed tree collapsed 0.011 0.719
2807 172 Chloride channel protein 4425 128 MS 115-1 alignment trimmed tree collapsed 0.010 0.168
2808 172 hypothetical protein 4424 132 55989 alignment trimmed tree collapsed 0.011 1.368
2809 172 Manganese transport protein MntH 4423 133 O127:H6 str. E2348/69 alignment trimmed tree collapsed 0.003 3.436
2810 172 Manganese transport protein MntH 4423 133 O127:H6 str. E2348/69 alignment trimmed tree collapsed 0.000 0.045
2811 172 Nucleoside permease NupC 3238 3241 508 511 4422 356 CFT073 alignment trimmed tree collapsed 1.486 1.300
2812 172 hypothetical protein 3929 4421 244 str. K-12 substr. DH10B alignment trimmed tree collapsed 0.000 1.079
2813 172 Putative negative regulator 2814 4419 4420 266 E22 alignment trimmed tree collapsed 0.000 0.797
2814 172 hypothetical protein 2813 4419 4420 265 B088 alignment trimmed tree collapsed 0.000 1.396
2815 172 Glutamyl-tRNA synthetase (EC 6.1.1.17) ## unambiguous 4418 127 MS 84-1 alignment trimmed tree collapsed 0.005 0.834
2816 172 hypothetical protein 4417 107 O157:H7 str. EC4113 alignment trimmed tree collapsed 0.051 0.129
2817 172 Xanthosine operon regulatory protein XapR, LysR family 1392 1827 2736 2965 965 1115 2366 2605 3962 664 55989 alignment trimmed tree collapsed 3.043 0.288
2818 172 hypothetical protein 22 63 SMS-3-5 alignment trimmed tree collapsed 0.000 0.437
2819 172 Xanthosine permease 2497 3179 21 639 2750 334 MS 84-1 alignment trimmed tree collapsed 1.728 0.646
2820 172 Xanthosine permease 4 H591 alignment trimmed tree collapsed 0.000 0.618
2821 172 Xanthosine phosphorylase (EC 2.4.2.1) 20 66 55989 alignment trimmed tree collapsed 0.033 0.194
2822 172 Putative outer membrane protein 19 97 CFT073 alignment trimmed tree collapsed 0.039 0.696
2823 172 LysR family transcriptional regulator YfeR 739 994 1392 18 98 1115 2018 3575 3962 660 E22 alignment trimmed tree collapsed 0.004 1.326
2824 172 Putative cytochrome oxidase 17 122 MS 119-7 alignment trimmed tree collapsed 0.004 0.146
2825 172 Putative cytoplasmic protein 16 125 MS 115-1 alignment trimmed tree collapsed 0.000 0.410
2826 172 DNA ligase (EC 6.5.1.2) 15 117 MS 107-1 alignment trimmed tree collapsed 0.004 0.821
2827 172 Cell division protein ZipA 14 120 E24377A alignment trimmed tree collapsed 0.001 0.779
2828 172 Sulfate transporter, CysZ-type 13 125 MS 107-1 alignment trimmed tree collapsed 0.009 0.923
2829 172 Cysteine synthase (EC 2.5.1.47) 12 225 536A alignment trimmed tree collapsed 0.958 0.905
2830 172 FIG00639255: hypothetical protein 11 11 O111:H- str. 11128 alignment trimmed tree 0.000 0.000
2831 172 Phosphocarrier protein of PTS system 1792 3247 4513 10 516 877 3982 557 MS 78-1 alignment trimmed tree collapsed 2.050 0.477
2832 172 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) 2724 9 4431 4782 380 55989 alignment trimmed tree collapsed 1.524 1.343
2833 172 PTS system, glucose-specific IIA component (EC 2.7.1.69) 8 137 BL21(DE3) alignment trimmed tree collapsed 0.000 0.178
2834 172 Pyridoxal kinase (EC 2.7.1.35) 3687 7 4691 262 55989 alignment trimmed tree collapsed 1.766 1.943
2835 172 hypothetical protein 6 124 H591 alignment trimmed tree collapsed 0.025 0.814
2836 172 Cysteine synthase B (EC 2.5.1.47) 2829 5 12 258 MS 84-1 alignment trimmed tree collapsed 1.032 1.084
2837 172 Sulfate and thiosulfate import ATP-binding protein CysA (EC 3.6.3.25) 2032 4 1905 261 MS 78-1 alignment trimmed tree collapsed 0.010 0.092
2838 172 Sulfate transport system permease protein CysW 3 134 55989 alignment trimmed tree collapsed 0.004 1.152
2839 172 Sulfate transport system permease protein CysT 2838 4703 2 3 3840 398 B185 alignment trimmed tree collapsed 1.312 1.160
2840 172 Sulfate and thiosulfate binding protein CysP 1333 1153 259 SMS-3-5 alignment trimmed tree collapsed 0.009 1.250
2841 172 Oxidoreductase ucpA (EC 1.-.-.-) 953 972 2348 2422 2567 2654 2739 2969 3212 3668 4026 4050 5287 82 412 1200 1313 1489 1793 1983 2014 2609 2956 4463 4594 4678 2021 ATCC 8739 alignment trimmed tree collapsed 2.734 1.202
2842 172 Sialic acid utilization regulator, RpiR family 657 2991 2629 3723 4677 350 B7A alignment trimmed tree collapsed 2.100 0.635
2843 172 N-acetylmuramic acid 6-phosphate etherase (EC 4.2.-.-) 4676 135 E24377A alignment trimmed tree collapsed 0.027 0.643
2844 172 PTS system, sucrose-specific IIB component (EC 2.7.1.69) / PTS system, sucrose-specific IIC component (EC 2.7.1.69) 2578 4362 4675 288 55989 alignment trimmed tree collapsed 1.731 0.618
2845 172 Beta-lactamase class C and other penicillin binding proteins 4674 91 55989 alignment trimmed tree collapsed 0.013 0.522
2846 172 Predicted iron-dependent peroxidase, Dyp-type family 4673 137 B str. REL606 alignment trimmed tree collapsed 0.004 0.814
2847 172 Predicted outer membrane lipoprotein YfeY 4672 135 E22 alignment trimmed tree collapsed 0.006 1.017
2848 172 Inner membrane protein YfeZ 4671 137 E2348/69 alignment trimmed tree collapsed 0.020 0.295
2849 172 Inner membrane protein YfeZ 4671 135 ETEC H10407 alignment trimmed tree collapsed 0.000 1.475
2850 172 Acetyltransferase YpeA 4191 4670 271 HS alignment trimmed tree collapsed 0.008 0.453
2851 172 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) 4669 121 MS 124-1 alignment trimmed tree collapsed 0.000 0.863
2852 172 Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) 4668 135 E24377A alignment trimmed tree collapsed 0.043 0.711
2853 172 Ethanolamine operon regulatory protein 4667 134 55989 alignment trimmed tree collapsed 0.010 0.519
2854 172 Ethanolamine utilization polyhedral-body-like protein EutK 4666 136 TA280 alignment trimmed tree collapsed 0.000 0.600
2855 172 Ethanolamine utilization polyhedral-body-like protein EutL 4665 162 042 alignment trimmed tree collapsed 0.000 0.448
2856 172 Ethanolamine ammonia-lyase light chain (EC 4.3.1.7) 4664 131 55989 alignment trimmed tree collapsed 0.017 0.255
2857 172 Ethanolamine ammonia-lyase heavy chain (EC 4.3.1.7) 4663 134 55989 alignment trimmed tree collapsed 0.003 0.415
2858 172 Ethanolamine utilization protein EutA 4662 137 APEC O1 alignment trimmed tree collapsed 0.011 4.805
2859 172 Ethanolamine utilization protein EutA 4662 130 B088 alignment trimmed tree collapsed 0.011 0.441
2860 172 Ethanolamine permease 4661 135 MS 124-1 alignment trimmed tree collapsed 0.016 0.913
2861 172 hypothetical protein 10 H736 alignment trimmed tree collapsed 0.027 0.460
2862 172 Ethanolamine utilization protein EutG 4322 129 O157:H7 EDL933 alignment trimmed tree collapsed 0.014 0.955
2863 172 Ethanolamine utilization protein EutJ 4323 133 E22 alignment trimmed tree collapsed 0.011 0.986
2864 172 Acetaldehyde dehydrogenase, ethanolamine utilization cluster 4324 155 O157:H7 str. Sakai alignment trimmed tree collapsed 0.005 0.448
2865 172 Ethanolamine utilization polyhedral-body-like protein EutN 4325 159 UM146 alignment trimmed tree collapsed 0.000 0.446
2866 172 Ethanolamine utilization polyhedral-body-like protein EutM 2854 4326 4666 398 042 alignment trimmed tree collapsed 1.203 0.560
2867 172 Phosphate acetyltransferase (EC 2.3.1.8), ethanolamine utilization-specific 2873 3377 3097 4327 4332 395 101-1 alignment trimmed tree collapsed 1.038 1.147
2868 172 Phosphate acetyltransferase (EC 2.3.1.8), ethanolamine utilization-specific 3377 4327 261 str. K-12 substr. DH10B alignment trimmed tree collapsed 1.225 3.329
2869 172 ATP:Cob(I)alamin adenosyltransferase (EC 2.5.1.17), ethanolamine utilization 4328 131 W3110 alignment trimmed tree collapsed 0.000 0.982
2870 172 Ethanolamine utilization protein EutQ 4329 134 55989 alignment trimmed tree collapsed 0.005 1.006
2871 172 Ethanolamine utilization protein EutP 4330 130 H591 alignment trimmed tree collapsed 0.000 0.404
2872 172 Ethanolamine utilization polyhedral-body-like protein EutS 4331 151 O157:H7 EDL933 alignment trimmed tree collapsed 0.000 0.359
2873 172 NADP-dependent malic enzyme (EC 1.1.1.40) 131 55989 alignment trimmed tree collapsed 0.000 0.696
2874 172 Transaldolase (EC 2.2.1.2) 5565 4408 172 SE15 alignment trimmed tree collapsed 0.000 0.574
2875 172 Transketolase (EC 2.2.1.1) 2464 2996 4409 254 55989 alignment trimmed tree collapsed 0.329 0.086
2876 172 FIG00637946: hypothetical protein 4410 28 MS 107-1 alignment trimmed tree 0.000 0.000
2877 172 Putative exported protein 4411 131 UM146 alignment trimmed tree collapsed 0.004 1.165
2878 172 GDP-mannose pyrophosphatase YffH 2376 2734 4412 261 55989 alignment trimmed tree collapsed 1.716 0.742
2879 172 Glutamate synthase [NADPH] small chain (EC 1.4.1.13) 1508 4413 208 55989 alignment trimmed tree collapsed 0.707 1.748
2880 172 Nitrate/nitrite sensor protein (EC 2.7.3.-) 4541 1025 4415 260 55989 alignment trimmed tree collapsed 1.309 0.944
2881 172 Probable aminoglycoside efflux pump 4416 126 FVEC1302 alignment trimmed tree collapsed 0.039 10.308
2882 172 Probable aminoglycoside efflux pump 1852 2143 3158 5263 268 2328 2522 3438 4416 805 IAI39 alignment trimmed tree collapsed 2.140 0.803
2883 172 FIG138056: a glutathione-dependent thiol reductase 3895 134 53638 alignment trimmed tree collapsed 0.000 1.296
2884 172 N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) 2534 584 3896 265 MS 175-1 alignment trimmed tree collapsed 0.006 1.400
2885 172 Putative inner membrane protein 3897 135 042 alignment trimmed tree collapsed 0.000 0.087
2886 172 Phospholipase/carboxylesterase family protein (EC 3.1.-.-) 3898 134 IAI1 alignment trimmed tree collapsed 0.017 0.321
2887 172 Predicted P-loop ATPase fused to an acetyltransferase COG1444 3899 134 MS 182-1 alignment trimmed tree collapsed 0.056 0.340
2888 172 Predicted P-loop ATPase fused to an acetyltransferase COG1444 3899 131 IAI1 alignment trimmed tree collapsed 0.029 0.906
2889 172 YpfJ protein, zinc metalloprotease superfamily 3900 122 1212A alignment trimmed tree collapsed 0.000 0.210
2890 172 VapC toxin protein 189 3142 61 H299 alignment trimmed tree collapsed 1.084 0.752
2891 172 Putative cytoplasmic protein 3901 50 B7A alignment trimmed tree collapsed 0.000 0.618
2892 172 Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) 3902 135 E22 alignment trimmed tree collapsed 0.000 0.152
2893 172 Outer membrane protein NlpB, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO, and YfgL); Lipoprotein-34 precursor 3903 131 O26:H11 str. 11368 alignment trimmed tree collapsed 0.000 0.945
2894 172 Dihydrodipicolinate synthase (EC 4.2.1.52) 3904 171 O157:H7 str. EC4045 alignment trimmed tree collapsed 2.451 0.526
2895 172 Glycine cleavage system transcriptional antiactivator GcvR 3905 135 B7A alignment trimmed tree collapsed 0.000 0.154
2896 172 Thiol peroxidase, Bcp-type (EC 1.11.1.15) 3906 132 1212A alignment trimmed tree collapsed 0.000 0.152
2897 172 Hydrogenase-4 component A (EC 1.-.-.-) 1307 2341 2547 2549 2575 2592 122 600 1508 1509 2412 3907 4359 896 E110019 alignment trimmed tree collapsed 1.694 0.423
2898 172 Hydrogenase-4 component B (EC 1.-.-.-) / Formate hydrogenlyase subunit 3 3908 82 55989 alignment trimmed tree collapsed 0.008 0.570
2899 172 Hydrogenase-4 component C (EC 1.-.-.-) 3359 2414 3909 4935 358 55989 alignment trimmed tree collapsed 0.004 0.560
2900 172 Hydrogenase-4 component C (EC 1.-.-.-) 3909 103 042 alignment trimmed tree collapsed 0.000 0.081
2901 172 Hydrogenase-4 component D (EC 1.-.-.-) 3355 3910 4931 195 H591 alignment trimmed tree collapsed 0.018 1.422
2902 172 Hydrogenase-4 component D (EC 1.-.-.-) 2898 3908 3910 164 O157:H7 str. EC4115 alignment trimmed tree collapsed 1.738 1.170
2903 172 Hydrogenase-4 component E (EC 1.-.-.-) 3911 101 MS 198-1 alignment trimmed tree collapsed 0.000 0.562
2904 172 Hydrogenase-4 component F (EC 1.-.-.-) 91 EC4100B alignment trimmed tree collapsed 0.016 0.700
2905 172 Hydrogenase-4 component G (EC 1.-.-.-) 2588 2415 233 55989 alignment trimmed tree collapsed 0.373 1.257
2906 172 Hydrogenase-4 component H (EC 1.-.-.-) 2587 2416 3913 227 IAI1 alignment trimmed tree collapsed 0.012 1.141
2907 172 Hydrogenase-4 component I (EC 1.-.-.-) 2586 2417 3914 215 SE11 alignment trimmed tree collapsed 0.487 1.305
2908 172 Formate hydrogenlyase maturation protein hycH 2585 2418 3915 227 55989 alignment trimmed tree collapsed 0.022 1.130
2909 172 Formate hydrogenlyase transcriptional activator 1
2910 172 Formate hydrogenlyase transcriptional activator 3916 224 MS 107-1 alignment trimmed tree collapsed 0.007 1.073
2911 172 Formate efflux transporter (TC 2.A.44 family) 4754 762 3917 232 B7A alignment trimmed tree collapsed 0.022 1.265
2912 172 Putative permease PerM (= YfgO) 2059 1879 3918 266 ETEC H10407 alignment trimmed tree collapsed 1.599 1.025
2913 172 Exported zinc metalloprotease YfgC precursor 3919 132 E24377A alignment trimmed tree collapsed 0.003 0.757
2914 172 Arsenate reductase (EC 1.20.4.1) 2130 3920 4116 264 MS 145-7 alignment trimmed tree collapsed 0.009 0.011
2915 172 Chromosomal replication initiator protein DnaA 1589 1919 241 MS 84-1 alignment trimmed tree collapsed 1.715 1.073
2916 172 Uracil permease 4614 2309 3922 219 E2348/69 alignment trimmed tree collapsed 1.105 1.157
2917 172 Uracil phosphoribosyltransferase (EC 2.4.2.9) 3923 133 E110019 alignment trimmed tree collapsed 0.005 8.076
2918 172 hypothetical protein 3924 97 MS 45-1 alignment trimmed tree collapsed 0.000 0.499
2919 172 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) 3925 132 CFT073 alignment trimmed tree collapsed 0.003 0.998
2920 172 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 3926 132 OP50 alignment trimmed tree collapsed 0.005 1.033
2921 172 Polyphosphate kinase (EC 2.7.4.1) 3927 132 MS 145-7 alignment trimmed tree collapsed 0.000 0.560
2922 172 Exopolyphosphatase (EC 3.6.1.11) 1111 238 ATCC 8739 alignment trimmed tree collapsed 0.000 1.069
2923 172 Putative cytochrome C-type biogenesis protein 3929 254 55989 alignment trimmed tree collapsed 2.131 0.232
2924 172 Putative cytochrome C-type biogenesis protein 3929 128 M605 alignment trimmed tree collapsed 0.009 0.083
2925 172 orf; Unknown function 114 O111:H- str. 11128 alignment trimmed tree collapsed 0.019 0.787
2926 172 Putative inner membrane protein 2205 127 042 alignment trimmed tree collapsed 0.000 0.127
2927 172 Putative outer membrane lipoprotein 3692 1650 4639 230 O55:H7 str. CB9615 alignment trimmed tree collapsed 1.369 0.894
2928 172 Putative membrane protein 1651 129 EC4100B alignment trimmed tree collapsed 0.006 0.165
2929 172 GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2) 1652 132 ABU 83972 alignment trimmed tree collapsed 0.002 0.603
2930 172 Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) 1653 132 536A alignment trimmed tree collapsed 0.000 0.612
2931 172 hypothetical protein 46 TA271 alignment trimmed tree collapsed 0.000 0.349
2932 172 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) 1654 125 TA271 alignment trimmed tree collapsed 0.010 0.546
2933 172 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) 1654 123 W alignment trimmed tree collapsed 0.635 0.429
2934 172 Hypothetical protein yfgJ 123 E24377A alignment trimmed tree collapsed 0.046 0.564
2935 172 GTP-binding protein EngA 30 129 MS 145-7 alignment trimmed tree collapsed 0.007 0.677
2936 172 Outer membrane protein YfgL, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO, and NlpB) 31 131 IAI1 alignment trimmed tree collapsed 0.011 0.019
2937 172 Mlr7403 protein 32 133 MS 21-1 alignment trimmed tree collapsed 0.000 0.806
2938 172 Histidyl-tRNA synthetase (EC 6.1.1.21) 33 133 55989 alignment trimmed tree collapsed 0.010 3.975
2939 172 Histidyl-tRNA synthetase (EC 6.1.1.21) 33 134 str. K-12 substr. MG1655 alignment trimmed tree collapsed 0.000 0.036
2940 172 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) 34 133 O157:H7 str. FRIK2000 alignment trimmed tree collapsed 0.000 0.442
2941 172 FIG021952: putative membrane protein 35 133 MS 196-1 alignment trimmed tree collapsed 0.000 0.087
2942 172 FIG021952: putative membrane protein 35 131 KO11 alignment trimmed tree collapsed 0.025 0.442
2943 172 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) 36 131 TA271 alignment trimmed tree collapsed 0.000 0.663
2944 172 Nucleoside diphosphate kinase (EC 2.7.4.6) 37 133 E110019 alignment trimmed tree collapsed 0.000 0.517
2945 172 Penicillin-insensitive transglycosylase (EC 2.4.2.-) & transpeptidase PBP-1C 38 118 55989 alignment trimmed tree collapsed 0.028 1.297
2946 172 Alpha-2-macroglobulin 39 127 55989 alignment trimmed tree collapsed 0.011 0.744
2947 172 Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1) 40 130 B088 alignment trimmed tree collapsed 0.000 0.958
2948 172 FIG00641578: hypothetical protein 20 53638 alignment trimmed tree collapsed 0.140 2.088
2949 172 Protein SseB 2589 125 E22 alignment trimmed tree collapsed 0.020 0.146
2950 172 Peptidase B (EC 3.4.11.23) 2590 131 MS 119-7 alignment trimmed tree collapsed 0.000 1.084
2951 172 Believed to be involved in assembly of Fe-S clusters 2591 133 DH1 alignment trimmed tree collapsed 0.000 0.434
2952 172 Ferredoxin, 2Fe-2S 4132 2592 3636 189 str. K-12 substr. MG1655 alignment trimmed tree collapsed 1.007 0.662
2953 172 Chaperone protein HscA 2593 131 042 alignment trimmed tree collapsed 0.000 0.681
2954 172 Chaperone protein HscB 2594 133 IAI39 alignment trimmed tree collapsed 0.000 0.723
2955 172 hypothetical protein 2595 123 B088 alignment trimmed tree collapsed 0.000 0.551
2956 172 Iron binding protein IscA for iron-sulfur cluster assembly 3741 5723 2087 2596 3879 381 CFT073 alignment trimmed tree collapsed 1.016 1.395
2957 172 Iron-sulfur cluster assembly scaffold protein IscU 2597 132 B str. REL606 alignment trimmed tree collapsed 0.000 0.087
2958 172 Cysteine desulfurase (EC 2.8.1.7), IscS subfamily 2598 129 E2348/69 alignment trimmed tree collapsed 0.000 0.257
2959 172 Iron-sulfur cluster regulator IscR 2599 132 O157:H7 str. TW14359 alignment trimmed tree collapsed 0.000 0.464
2960 172 tRNA:Cm32/Um32 methyltransferase 2600 132 ED1a alignment trimmed tree collapsed 0.000 0.423
2961 172 Inositol-1-monophosphatase (EC 3.1.3.25) 2601 131 str. K-12 substr. DH10B alignment trimmed tree collapsed 0.000 0.241
2962 172 Uncharacterized protein yfhR 2602 133 O103:H2 str. 12009 alignment trimmed tree collapsed 0.008 0.766
2963 172 Stationary phase inducible protein CsiE 2603 125 B088 alignment trimmed tree collapsed 0.015 0.294
2964 172 Probable 3-phenylpropionic acid transporter ## PnuD 2775 2604 3865 208 NC101 alignment trimmed tree collapsed 2.024 0.767
2965 172 Hca operon (3-phenylpropionic acid catabolism) transcriptional activator HcaR 2736 2817 3008 3641 4278 5351 965 1333 2190 2605 2646 2876 3526 3962 4133 4889 1515 ATCC 8739 alignment trimmed tree collapsed 2.507 1.320
2966 172 3-phenylpropionate dioxygenase, alpha subunit (EC 1.14.12.19) 2606 100 B171 alignment trimmed tree collapsed 0.000 0.167
2967 172 3-phenylpropionate dioxygenase, beta subunit (EC 1.14.12.19) 2607 104 str. K-12 substr. MG1655 alignment trimmed tree collapsed 0.017 0.632
2968 172 3-phenylpropionate dioxygenase ferredoxin subunit 2608 101 str. K-12 substr. DH10B alignment trimmed tree collapsed 0.011 0.459
2969 172 2,3-dihydroxy-2,3-dihydro-phenylpropionate dehydrogenase (EC 1.3.1.-) 972 2654 2739 2841 4026 1200 1983 2014 2609 4594 4678 779 TA280 alignment trimmed tree collapsed 2.683 1.189
2970 172 3-phenylpropionate dioxygenase ferredoxin--NAD(+) reductase component (EC 1.18.1.3) 2610 104 H591 alignment trimmed tree collapsed 0.029 0.733
2971 172 Inner membrane protein YphA 2260 2611 3695 260 W3110 alignment trimmed tree collapsed 1.258 0.109
2972 172 Aldose 1-epimerase family protein YphB 2612 132 53638 alignment trimmed tree collapsed 0.008 0.926
2973 172 Hypothetical zinc-type alcohol dehydrogenase-like protein YphC 4223 5373 2255 2613 406 55989 alignment trimmed tree collapsed 2.037 0.898
2974 172 Predicted sugar ABC transport system, permease protein YphD 1462 2529 2614 291 042 alignment trimmed tree collapsed 0.016 0.018
2975 172 Predicted sugar ABC transport system, ATP-binding protein YphE 926 1461 1645 1857 2032 2183 2837 3203 3223 3387 3448 4082 4453 4567 4701 4710 4919 5003 5194 5476 5555 4 210 283 497 623 835 1438 1710 1834 1856 1905 2517 2530 2615 2929 3106 3242 3384 3654 3838 3847 4472 4790 3166 IAI1 alignment trimmed tree collapsed 3.965 1.657
2976 172 Predicted sugar ABC transport system, ATP-binding protein YphE 1
2977 172 Predicted sugar ABC transport system, periplasmic binding protein YphF precursor 1463 2616 289 55989 alignment trimmed tree collapsed 0.003 0.147
2978 172 Uncharacterized protein YphG, TPR-domain containing 2617 110 MS 115-1 alignment trimmed tree collapsed 0.035 0.868
2979 172 Putative NAGC-like transcriptional regulator 2618 127 55989 alignment trimmed tree collapsed 0.013 0.127
2980 172 Serine hydroxymethyltransferase (EC 2.1.2.1) 2619 132 O103:H2 str. 12009 alignment trimmed tree collapsed 0.003 0.619
2981 172 hypothetical protein 62 TA271 alignment trimmed tree collapsed 0.027 0.530
2982 172 Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17) 2620 133 BL21(DE3) alignment trimmed tree collapsed 0.000 0.444
2983 172 Nitrogen regulatory protein P-II 5144 1402 2621 266 str. K-12 substr. MG1655 alignment trimmed tree collapsed 0.428 0.926
2984 172 Putative sensory histidine kinase YfhA 1034 1278 659 2622 3452 478 MS 107-1 alignment trimmed tree collapsed 1.434 0.005
2985 172 putative alpha helix protein 2623 118 MS 21-1 alignment trimmed tree collapsed 0.022 0.066
2986 172 Putative sensor-like histidine kinase YfhK 2624 131 O127:H6 str. E2348/69 alignment trimmed tree collapsed 0.000 0.664
2987 172 Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3) 2625 130 B7A alignment trimmed tree collapsed 0.008 0.143
2988 172 Transglycosylase, Slt family 2626 123 042 alignment trimmed tree collapsed 0.000 0.785
2989 172 tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) 985 2627 265 W alignment trimmed tree collapsed 1.333 1.944
2990 172 Hypothetical protein, similar to phosphoserine phosphatase 2628 131 B354 alignment trimmed tree collapsed 0.005 1.476
2991 172 Putative transcriptional regulator 657 2842 2629 3723 4677 319 O157:H7 alignment trimmed tree collapsed 1.408 0.698
2992 172 4Fe-4S ferredoxin, iron-sulfur binding 2630 51 E110019 alignment trimmed tree collapsed 0.000 0.439
2993 172 Holo-[acyl-carrier protein] synthase (EC 2.7.8.7) 2631 160 M605 alignment trimmed tree collapsed 0.000 0.460
2994 172 Pyridoxine 5'-phosphate synthase (EC 2.6.99.2) 2632 133 O157:H7 str. TW14359 alignment trimmed tree collapsed 0.017 0.667
2995 172 DNA recombination and repair protein RecO 2633 130 KO11 alignment trimmed tree collapsed 0.005 0.341
2996 172 GTP-binding protein Era 2634 133 IAI1 alignment trimmed tree collapsed 0.000 0.654
2997 172 Ribonuclease III (EC 3.1.26.3) 2635 115 MS 145-7 alignment trimmed tree collapsed 0.000 0.094
2998 172 Signal peptidase I (EC 3.4.21.89) 2636 131 M605 alignment trimmed tree collapsed 0.000 0.488
2999 172 Translation elongation factor LepA 2637 132 1044A alignment trimmed tree collapsed 0.000 0.416
3000 172 Sigma factor RpoE regulatory protein RseC 2638 131 K12 alignment trimmed tree collapsed 0.039 0.455
3001 172 Sigma factor RpoE negative regulatory protein RseB precursor 2639 133 SE11 alignment trimmed tree collapsed 0.000 0.584
3002 172 Sigma factor RpoE negative regulatory protein RseA 2640 131 ATCC 8739 alignment trimmed tree collapsed 0.005 0.601
3003 172 RNA polymerase sigma factor RpoE 2641 128 F11 alignment trimmed tree collapsed 0.000 0.160
3004 172 L-aspartate oxidase (EC 1.4.3.16) 2642 132 55989 alignment trimmed tree collapsed 0.008 0.142
3005 172 COG4123: Predicted O-methyltransferase 2643 132 MS 145-7 alignment trimmed tree collapsed 0.050 0.750
3006 172 ATP-dependent RNA helicase SrmB 2644 132 W alignment trimmed tree collapsed 0.003 0.092
3007 172 FIG00641394: hypothetical protein 2645 126 MS 146-1 alignment trimmed tree collapsed 0.308 0.134
3008 172 LysR family transcriptional regulator YfiE 2965 3641 4278 5493 2190 2605 2646 2876 3526 4342 1035 55989 alignment trimmed tree collapsed 3.040 0.516
3009 172 Transporter, LysE family 2647 126 TA271 alignment trimmed tree collapsed 0.031 0.372
3010 172 Pyruvate formate-lyase (EC 2.3.1.54) 2648 131 MS 187-1 alignment trimmed tree collapsed 0.000 0.701
3011 172 Uracil-DNA glycosylase, family 1 2649 130 MS 124-1 alignment trimmed tree collapsed 0.013 0.447
3012 172 hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-] 2650 130 042 alignment trimmed tree collapsed 0.000 0.566
3013 172 Thioredoxin 2 (EC 1.8.1.8) 2651 126 53638 alignment trimmed tree collapsed 0.000 0.309
3014 172 Uncharacterized protein YfiP 2652 132 55989 alignment trimmed tree collapsed 0.005 0.185
3015 172 Protein acetyltransferase 2653 126 IAI1 alignment trimmed tree collapsed 0.007 0.453
3016 172 CDP-diacylglycerol--serine O-phosphatidyltransferase (EC 2.7.8.8) 2654 127 BL21(DE3) alignment trimmed tree collapsed 0.000 0.455
3017 172 Putative outer membrane lipoprotein 4 E2348/69 alignment trimmed tree collapsed 0.236 1.732
3018 172 Alpha-ketoglutarate permease 1292 2155 616 1255 2656 349 MS 115-1 alignment trimmed tree collapsed 1.924 0.373
3019 172 FIG00638149: hypothetical protein 40 1212A alignment trimmed tree collapsed 0.023 0.909
3020 172 ClpB protein 4101 86 ATCC 8739 alignment trimmed tree collapsed 0.000 0.110
3021 172 COG1496: Uncharacterized conserved protein 4100 130 55989 alignment trimmed tree collapsed 0.016 0.422
3022 172 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) ## LSU Psi1911, Psi1915 and Psi1917 4099 144 FVEC1302 alignment trimmed tree collapsed 0.004 0.282
3023 172 Probable component of the lipoprotein assembly complex (forms a complex with YaeT, YfgL, and NlpB) 4098 132 O157:H7 str. TW14588 alignment trimmed tree collapsed 0.001 0.269
3024 172 Ribosome hibernation protein YfiA 4097 133 IAI39 alignment trimmed tree collapsed 0.009 0.272
3025 172 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) 4096 134 E24377A alignment trimmed tree collapsed 0.004 0.094
3026 172 Chorismate mutase I (EC 5.4.99.5) / Cyclohexadienyl dehydrogenase (EC 1.3.1.12)(EC 1.3.1.43) 4095 133 IAI1 alignment trimmed tree collapsed 0.006 0.623
3027 172 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) 3766 4964 2465 2717 4094 369 B7A alignment trimmed tree collapsed 0.955 0.308
3028 172 hypothetical protein 4093 134 MS 119-7 alignment trimmed tree collapsed 0.009 0.781
3029 172 Uncharacterized protein YfiR precursor 4092 128 O157:H7 str. FRIK966 alignment trimmed tree collapsed 0.018 0.490
3030 172 Inner membrane protein YfiN 4091 133 042 alignment trimmed tree collapsed 0.001 0.727
3031 172 Inner membrane protein YfiN 4091 133 55989 alignment trimmed tree collapsed 0.003 0.360
3032 172 Integral membrane protein YfiB 4090 73 EC4100B alignment trimmed tree collapsed 0.000 0.900
3033 172 LSU ribosomal protein L19p 4089 133 042 alignment trimmed tree 0.000 0.000
3034 172 tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31) 4088 131 IAI1 alignment trimmed tree collapsed 0.000 0.319
3035 172 16S rRNA processing protein RimM 4086 128 ETEC H10407 alignment trimmed tree collapsed 0.000 0.186
3036 172 SSU ribosomal protein S16p 4085 134 042 alignment trimmed tree 0.000 0.000
3037 172 Signal recognition particle, subunit Ffh SRP54 (TC 3.A.5.1.1) 4084 127 IAI1 alignment trimmed tree collapsed 0.000 0.263
3038 172 FIG001154: CcsA-related protein 4083 119 str. K-12 substr. MG1655 alignment trimmed tree collapsed 0.000 0.358
3039 172 Hemolysins and related proteins containing CBS domains 916 2993 4082 238 SMS-3-5 alignment trimmed tree collapsed 0.007 1.116
3040 172 Heat shock protein GrpE 4081 129 IAI39 alignment trimmed tree collapsed 0.000 0.541
3041 172 Probable inorganic polyphosphate/ATP-NAD kinase (EC 2.7.1.23) 83 F11 alignment trimmed tree collapsed 0.019 0.472
3042 172 NAD kinase (EC 2.7.1.23) 4079 65 E22 alignment trimmed tree collapsed 0.004 0.852
3043 172 DNA repair protein RecN 4078 129 E22 alignment trimmed tree collapsed 0.014 1.000
3044 172 Outer membrane lipoprotein SmpA, a component of the essential YaeT outer-membrane protein assembly complex 4077 131 IAI1 alignment trimmed tree collapsed 0.000 0.128
3045 172 UPF0125 protein yfjF 4076 133 O55:H7 str. CB9615 alignment trimmed tree collapsed 0.021 0.990
3046 172 Putative oligoketide cyclase/lipid transport protein, similarity with yeast ubiquinone-binding protein YOL008W 4075 96 O103:H2 str. 12009 alignment trimmed tree collapsed 0.000 0.526
3047 172 tmRNA-binding protein SmpB 4074 134 MS 124-1 alignment trimmed tree collapsed 0.000 0.256
3048 172 Integrase 393 832 2500 3437 3509 5408 3044 3503 4073 544 55989 alignment trimmed tree collapsed 2.779 0.689
3049 172 Integrase 393 832 2500 3509 5408 1533 3044 3288 3503 4073 4635 639 55989 alignment trimmed tree collapsed 1.795 0.134
3050 172 FIG00641050: hypothetical protein 3 55989 alignment trimmed tree collapsed 0.006 1.414
3051 172 FIG00643461: hypothetical protein 1267 10 55989 alignment trimmed tree collapsed 0.408 2.804
3052 172 FIG00643461: hypothetical protein 1267 11 55989 alignment trimmed tree collapsed 0.519 0.877
3053 172 FIG00641821: hypothetical protein 1268 6 55989 alignment trimmed tree 0.000 0.000
3054 172 hypothetical protein 1269 7 EC4100B alignment trimmed tree 0.000 0.000
3055 172 FIG00643223: hypothetical protein 6 EC4100B alignment trimmed tree 0.000 0.000
3056 172 Prophage CP4-57 regulatory protein alpA 613 1270 1536 87 H591 alignment trimmed tree collapsed 1.468 0.801
3057 172 NgrB 2280 3562 1271 231 EC4100B alignment trimmed tree collapsed 1.173 1.387
3058 172 COG2963: Transposase and inactivated derivatives 695 984 1192 1216 1230 2511 274 1272 842 WV_060327 alignment trimmed tree collapsed 0.019 1.167
3059 172 hypothetical protein 1273 74 EC4100B alignment trimmed tree collapsed 0.000 0.319
3060 172 COG2801: Transposase and inactivated derivatives 3497 1274 1182 E110019 alignment trimmed tree collapsed 2.145 1.078
3061 172 hypothetical protein 4483 1000 1275 148 FVEC1412 alignment trimmed tree collapsed 0.104 0.179
3062 172 FIG01268102: hypothetical protein 1278 70 O157:H7 EDL933 alignment trimmed tree collapsed 0.005 0.476
3063 172 hypothetical protein 65 MS 84-1 alignment trimmed tree collapsed 0.000 0.446
3064 172 hypothetical protein 5 H591 alignment trimmed tree collapsed 0.000 0.564
3065 172 unknown function 1
3066 172 Alpha-amylase (EC 3.2.1.1) (1,4-alpha-D-glucan glucanohydrolase) (GLYCOGENASE) # fragment 379 38 MS 107-1 alignment trimmed tree collapsed 0.021 0.193
3067 172 Carbon starvation induced protein CsiD 380 133 ATCC 8739 alignment trimmed tree collapsed 0.019 0.955
3068 172 Oxidase YgaF in csiD-gabDTP operon 381 130 SE11 alignment trimmed tree collapsed 0.010 0.471
3069 172 Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) 1670 3810 4062 4123 4154 4186 5460 382 1233 2222 3276 3618 3644 3726 4846 958 E110019 alignment trimmed tree collapsed 2.692 0.496
3070 172 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) 4064 383 3274 236 55989 alignment trimmed tree collapsed 0.003 0.956
3071 172 Gamma-aminobutyrate (GABA) transporter 1416 1094 3294 254 042 alignment trimmed tree collapsed 1.414 0.972
3072 172 CsiR, transcriptional repressor of CsiD 1825 3295 217 101-1 alignment trimmed tree collapsed 1.713 0.774
3073 172 hypothetical protein 3296 132 042 alignment trimmed tree collapsed 0.007 0.325
3074 172 hypothetical protein 3297 133 UTI89 alignment trimmed tree 0.000 0.000
3075 172 Transcriptional regulator, ArsR family 2131 3298 4115 186 BW2952 alignment trimmed tree collapsed 1.668 0.660
3076 172 Rhodanese-related sulfurtransferases 3299 132 EC4100B alignment trimmed tree collapsed 0.012 0.080
3077 172 DNA-binding protein stpA 4553 3300 3371 299 E110019 alignment trimmed tree collapsed 0.878 0.326
3078 172 FIG00640544: hypothetical protein 20 KO11 alignment trimmed tree collapsed 0.207 1.567
3079 172 Putative inner membrane protein 3301 131 O157:H7 str. EC4501 alignment trimmed tree collapsed 0.007 1.798
3080 172 Putative cytoplasmic protein 3302 131 ATCC 8739 alignment trimmed tree collapsed 0.000 0.237
3081 172 hypothetical protein 2257 3698 263 APEC O1 alignment trimmed tree collapsed 1.015 0.477
3082 172 Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib 4653 133 55989 alignment trimmed tree collapsed 0.019 3.646
3083 172 Ribonucleotide reduction protein NrdI 4654 131 TA271 alignment trimmed tree collapsed 0.000 0.912
3084 172 Ribonucleotide reductase of class Ib (aerobic), alpha subunit (EC 1.17.4.1) 130 55989 alignment trimmed tree collapsed 0.017 0.116
3085 172 Ribonucleotide reductase of class Ib (aerobic), beta subunit (EC 1.17.4.1) 4757 133 101-1 alignment trimmed tree collapsed 0.000 0.857
3086 172 L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1) 4758 131 DH1 alignment trimmed tree collapsed 0.000 0.326
3087 172 L-proline glycine betaine ABC transport system permease protein ProW (TC 3.A.1.12.1) 4759 132 E24377A alignment trimmed tree collapsed 0.006 0.474
3088 172 L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) 4760 131 ATCC 8739 alignment trimmed tree collapsed 0.000 0.206
3089 172 hypothetical protein 4761 113 MS 182-1 alignment trimmed tree collapsed 0.058 0.826
3090 172 MFS permease protein 3527 4762 255 53638 alignment trimmed tree collapsed 0.012 0.088
3091 172 Branched-chain amino acid transport, AzlC 1
3092 172 Branched-chain amino acid transport, AzlC 4763 133 B7A alignment trimmed tree collapsed 0.006 2.885
3093 172 Branched-chain amino acid transport, AzlD 4764 133 O111:H- str. 11128 alignment trimmed tree collapsed 0.000 0.259
3094 172 Transcription repressor 4765 157 2362-75 alignment trimmed tree collapsed 0.000 0.470
3095 172 hypothetical protein 4766 91 O157:H7 str. EC4115 alignment trimmed tree collapsed 0.014 1.179
3096 172 Multidrug resistance protein A 2782 3858 4767 237 IAI39 alignment trimmed tree collapsed 0.786 1.081
3097 172 Multidrug resistance protein B 2781 3859 4768 279 B088 alignment trimmed tree collapsed 0.534 0.294
3098 172 S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS 4769 132 E22 alignment trimmed tree collapsed 0.012 0.946
3099 172 Glutamate--cysteine ligase (EC 6.3.2.2) 1
3100 172 Putative membrane protein 4771 128 MS 124-1 alignment trimmed tree collapsed 0.000 0.178
3101 172 Putative phosphatase YqaB 1601 3372 3790 341 857 1439 1479 1785 4772 781 NC101 alignment trimmed tree collapsed 3.151 1.125
3102 172 Carbon storage regulator 388 134 KO11 alignment trimmed tree collapsed 0.000 0.490
3103 172 hypothetical protein 387 91 S88 alignment trimmed tree 0.000 0.000
3104 172 Alanyl-tRNA synthetase (EC 6.1.1.7) 386 129 MS 107-1 alignment trimmed tree collapsed 0.003 0.099
3105 172 hypothetical protein 385 115 OP50 alignment trimmed tree collapsed 0.000 0.362
3106 172 Regulatory protein RecX 384 134 H591 alignment trimmed tree collapsed 0.000 0.614
3107 172 RecA protein 253 134 53638 alignment trimmed tree collapsed 0.000 0.216
3108 172 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS 254 3788 174 ETEC H10407 alignment trimmed tree collapsed 0.000 0.562
3109 172 Membrane-bound lytic murein transglycosylase B precursor (EC 3.2.1.-) 255 135 55989 alignment trimmed tree collapsed 0.004 0.084
3110 173 Protein NinB 273 18 ED1a alignment trimmed tree collapsed 0.079 0.043
3111 174 hypothetical protein 1
3112 175 UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14) 17 55989 alignment trimmed tree collapsed 0.742 1.290
3113 175 N-Acetylneuraminate cytidylyltransferase (EC 2.7.7.43) 14 55989 alignment trimmed tree collapsed 0.000 1.523
3114 175 N-acetylneuraminate synthase (EC 2.5.1.56) 2068 17 55989 alignment trimmed tree collapsed 0.000 1.349
3115 175 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) 4552 2857 3370 248 APEC O1 alignment trimmed tree collapsed 0.722 0.155
3116 175 UDP-glucose 4-epimerase (EC 5.1.3.2) 1497 2856 3137 158 MS 119-7 alignment trimmed tree collapsed 0.003 1.874
3117 175 Colanic acid biosynthesis protein wcaM 2855 120 55989 alignment trimmed tree collapsed 0.047 0.191
3118 175 Colanic acid biosynthesis glycosyl transferase WcaL 2854 119 55989 alignment trimmed tree collapsed 0.025 0.051
3119 175 Colanic acid biosynthesis glycosyl transferase WcaL 119 55989 alignment trimmed tree collapsed 0.039 0.177
3120 175 Colanic acid biosysnthesis protein WcaK 2853 121 55989 alignment trimmed tree collapsed 0.005 0.159
3121 175 Lipopolysaccharide biosynthesis protein WzxC 2852 119 55989 alignment trimmed tree collapsed 0.006 0.200
3122 175 Colanic acid biosynthsis UDP-glucose lipid carrier transferase WcaJ 2851 117 TA143 alignment trimmed tree collapsed 0.005 0.164
3123 175 Phosphomannomutase (EC 5.4.2.8) 2850 174 55989 alignment trimmed tree collapsed 0.023 0.328
3124 175 Phosphomannomutase (EC 5.4.2.8) 1760 2760 2850 299 55989 alignment trimmed tree collapsed 1.898 0.769
3125 175 FIG00639168: hypothetical protein 2849 43 55989 alignment trimmed tree collapsed 0.342 0.106
3126 175 Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22) 2848 190 W alignment trimmed tree collapsed 0.702 0.654
3127 175 Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22) 2848 192 O157:H7 alignment trimmed tree collapsed 0.058 0.603
3128 175 Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22) 2848 185 MS 119-7 alignment trimmed tree collapsed 1.113 0.745
3129 175 Colanic acid biosysnthesis glycosyl transferase WcaI 2847 113 IAI39 alignment trimmed tree collapsed 0.011 0.267
3130 175 GDP-mannose mannosyl hydrolase (EC 3.6.1.-) 2846 143 55989 alignment trimmed tree collapsed 0.034 0.399
3131 175 GDP-L-fucose synthetase (EC 1.1.1.271); Colanic acid biosynthesis protein wcaG 2845 215 55989 alignment trimmed tree collapsed 0.007 0.690
3132 175 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) 2844 159 O157:H7 str. EC4501 alignment trimmed tree collapsed 0.000 0.254
3133 175 Colanic acid biosynthesis acetyltransferase WcaF (EC 2.3.1.-) 2843 123 55989 alignment trimmed tree collapsed 0.017 0.260
3134 175 Colanic acid biosynthesis glycosyl transferase WcaE 2842 123 53638 alignment trimmed tree collapsed 0.020 0.282
3135 175 Colanic acid polymerase WcaD 2841 124 E2348/69 alignment trimmed tree collapsed 0.016 0.108
3136 175 Colanic acid biosynthesis glycosyl transferase WcaC 2840 119 O26:H11 str. 11368 alignment trimmed tree collapsed 0.018 1.685
3137 175 Colanic acid biosynthesis acetyltransferase WcaB (EC 2.3.1.-) 1485 2839 3076 254 ED1a alignment trimmed tree collapsed 1.259 0.785
3138 175 Colanic acid biosynthesis glycosyl transferase WcaA 2838 176 IAI1 alignment trimmed tree collapsed 0.008 0.654
3139 175 Tyrosine-protein kinase Wzc (EC 2.7.10.2) 4587 2837 3245 259 S88 alignment trimmed tree collapsed 0.960 0.796
3140 175 Low molecular weight protein-tyrosine-phosphatase Wzb (EC 3.1.3.48) 4588 2836 216 B7A alignment trimmed tree collapsed 0.008 0.746
3141 175 Polysaccharide export lipoprotein Wza 1417 2835 220 MS 21-1 alignment trimmed tree collapsed 0.000 0.820
3142 175 Putative capsular polysaccharide transport protein YegH 3894 1358 2834 261 H736 alignment trimmed tree collapsed 0.816 0.559
3143 175 AsmA protein 132 55989 alignment trimmed tree collapsed 0.006 0.753
3144 175 Deoxycytidine triphosphate deaminase (EC 3.5.4.13) 3878 133 M605 alignment trimmed tree collapsed 0.006 0.368
3145 175 Uridine kinase (EC 2.7.1.48) [C1] 3877 134 CFT073 alignment trimmed tree collapsed 0.000 0.117
3146 175 putative sensor-type protein 3876 131 MS 200-1 alignment trimmed tree collapsed 0.000 0.071
3147 175 FIG00639031: hypothetical protein 88 55989 alignment trimmed tree collapsed 0.016 0.478
3148 175 hypothetical protein 133 B185 alignment trimmed tree collapsed 0.020 0.246
3149 175 DNA-3-methyladenine glycosylase II (EC 3.2.2.21) 3875 134 EC4100B alignment trimmed tree collapsed 0.024 0.305
3150 175 Putative heat shock protein YegD 3874 131 E22 alignment trimmed tree collapsed 0.003 0.554
3151 175 Putative chaperonin 3873 123 55989 alignment trimmed tree collapsed 0.002 0.085
3152 175 COG0631: Serine/threonine protein phosphatase 3872 134 E22 alignment trimmed tree collapsed 0.041 1.007
3153 175 hypothetical protein 3871 134 UMN026 alignment trimmed tree collapsed 0.019 0.825
3154 175 hypothetical protein 505 3871 134 MS 182-1 alignment trimmed tree collapsed 0.015 0.217
3155 175 Probable RND efflux membrane fusion protein 4530 128 E2348/69 alignment trimmed tree collapsed 0.012 0.003
3156 175 Multidrug transporter MdtB 1852 2143 3158 5156 5263 268 957 2328 2522 3438 4416 1007 str. K-12 substr. DH10B alignment trimmed tree collapsed 2.065 0.904
3157 175 Multidrug transporter MdtB 2882 3158 5263 268 2328 3438 4416 572 55989 alignment trimmed tree collapsed 2.484 1.163
3158 175 Multidrug transporter MdtC 2143 268 4416 552 55989 alignment trimmed tree collapsed 0.859 0.404
3159 175 Multidrug transporter MdtD 1466 267 2525 261 W alignment trimmed tree collapsed 0.867 0.038
3160 175 Sensory histidine kinase BaeS 266 133 O157:H7 EDL933 alignment trimmed tree collapsed 0.005 0.711
3161 175 Response regulator BaeR 817 820 1159 1980 2084 2102 3503 3655 4458 5040 5082 5259 265 467 1455 1706 1775 2034 2037 2248 2332 2397 3308 3432 3539 3583 3748 1790 E110019 alignment trimmed tree collapsed 2.315 0.754
3162 175 hypothetical protein 84 B088 alignment trimmed tree collapsed 0.000 0.265
3163 175 hypothetical protein 264 131 APEC O1 alignment trimmed tree collapsed 0.009 0.191
3164 175 COG3609: Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain 263 83 E110019 alignment trimmed tree collapsed 0.000 0.652
3165 175 putative plasmid stabilization protein 262 59 O26:H11 str. 11368 alignment trimmed tree collapsed 1.292 0.546
3166 175 Putative protease 4176 261 133 O26:H11 str. 11368 alignment trimmed tree collapsed 0.003 0.089
3167 175 hypothetical protein 260 131 E22 alignment trimmed tree collapsed 0.064 0.051
3168 175 Transcription regulator [contains diacylglycerol kinase catalytic domain] 259 132 MS 78-1 alignment trimmed tree collapsed 0.018 0.859
3169 175 Galactitol utilization operon repressor 675 1285 1711 2569 2605 2702 3838 4045 4684 80 296 666 749 2742 2961 3206 3767 3806 4620 1194 B088 alignment trimmed tree collapsed 0.004 1.093
3170 175 Galactitol-1-phosphate 5-dehydrogenase (EC 1.1.1.251) 1494 3842 68 2743 3067 3795 562 55989 alignment trimmed tree collapsed 1.927 0.652
3171 175 PTS system, galactitol-specific IIC component (EC 2.7.1.69) 2744 194 MS 124-1 alignment trimmed tree collapsed 0.007 0.653
3172 175 PTS system, galactitol-specific IIB component (EC 2.7.1.69) 2745 218 IAI1 alignment trimmed tree collapsed 0.021 0.775
3173 175 PTS system, galactitol-specific IIA component (EC 2.7.1.69) 2746 198 55989 alignment trimmed tree collapsed 0.013 0.748
3174 175 Tagatose-6-phosphate kinase GatZ (EC 2.7.1.144) 1712 750 2747 262 55989 alignment trimmed tree collapsed 0.011 0.422
3175 175 Tagatose-6-phosphate kinase GatZ (EC 2.7.1.144) 1712 750 2747 259 55989 alignment trimmed tree collapsed 0.688 1.749
3176 175 Tagatose-1,6-bisphosphate aldolase GatY (EC 4.1.2.-) 1719 757 2748 455 O157:H7 str. FRIK2000 alignment trimmed tree collapsed 0.010 0.594
3177 175 Tagatose-1,6-bisphosphate aldolase GatY (EC 4.1.2.-) 1
3178 175 Fructose-bisphosphate aldolase class I (EC 4.1.2.13) 2749 126 55989 alignment trimmed tree collapsed 0.003 0.577
3179 175 Putative nucleoside transporter YegT 2750 128 str. K-12 substr. DH10B alignment trimmed tree collapsed 0.000 0.137
3180 175 ADP-ribosylglycohydrolase YegU (EC 3.2.-.-) 2751 139 55989 alignment trimmed tree collapsed 0.030 0.236
3181 175 Uncharacterized sugar kinase YegV, PfkB family 1464 2527 303 M605 alignment trimmed tree collapsed 0.026 0.252
3182 175 Uncharacterized HTH-type transcriptional regulator YegW 1282 663 1524 278 O157:H7 str. EC4115 alignment trimmed tree collapsed 0.000 1.022
3183 175 Glycosyl hydrolase YegX, family 25 1523 130 IAI1 alignment trimmed tree collapsed 0.031 0.781
3184 175 Phosphomethylpyrimidine kinase (EC 2.7.4.7) 1522 133 E24377A alignment trimmed tree collapsed 0.008 0.310
3185 175 Hydroxyethylthiazole kinase (EC 2.7.1.50) 1521 132 O157:H7 str. TW14359 alignment trimmed tree collapsed 0.017 0.420
3186 175 hypothetical protein 5374 1520 2254 249 F11 alignment trimmed tree collapsed 1.052 0.982
3187 175 Nickel/cobalt efflux transporter RcnA 1519 125 O83:H1 str. NRG 857C alignment trimmed tree collapsed 0.043 0.640
3188 175 Uncharacterized protein YohN precursor 1518 125 O103:H2 str. 12009 alignment trimmed tree collapsed 0.009 0.651
3189 175 Uncharacterized protein YehA precursor 83 ETEC H10407 alignment trimmed tree collapsed 0.020 0.146
3190 175 Fimbriae usher protein StcC 4256 1516 1600 4925 355 55989 alignment trimmed tree collapsed 2.244 0.782
3191 175 Uncharacterized fimbrial chaperone YehC precursor 1620 1726 2194 2198 4257 4796 5237 5704 171 235 1515 1601 2150 3364 4211 4744 4926 1155 M718 alignment trimmed tree collapsed 2.738 1.182
3192 175 Putative fimbrial-like protein 1514 163 B7A alignment trimmed tree collapsed 0.006 0.539
3193 175 Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like 442 134 BL21 alignment trimmed tree collapsed 0.000 0.186
3194 175 Methionyl-tRNA synthetase (EC 6.1.1.10) 441 130 MS 115-1 alignment trimmed tree collapsed 0.005 1.030
3195 175 Molybdate metabolism regulator 132 EC4100B alignment trimmed tree collapsed 0.008 0.691
3196 175 COG3677: Transposase and inactivated derivatives 106 276 651 728 2110 2318 3500 3908 4477 4979 5065 5199 4747 4813 779 ETEC H10407 alignment trimmed tree collapsed 0.020 0.315
3197 175 COG1662: Transposase and inactivated derivatives, IS1 family 105 655 727 2111 2317 2676 4596 4640 4980 5064 426 E110019 alignment trimmed tree collapsed 1.579 0.404
3198 175 hypothetical protein 4477 132 042 alignment trimmed tree collapsed 0.000 0.303
3199 175 Hypothetical response regulatory protein yehT 2798 4433 4476 266 APEC O1 alignment trimmed tree collapsed 0.000 0.981
3200 175 Autolysin sensor kinase (EC 2.7.3.-) 4475 129 53638 alignment trimmed tree collapsed 0.004 0.667
3201 175 HTH-type transcriptional regulator mlrA 4467 1419 4474 194 str. K-12 substr. MG1655 alignment trimmed tree collapsed 0.922 0.963
3202 175 Osmoprotectant ABC transporter inner membrane protein YehW 3204 4471 4473 266 SE11 alignment trimmed tree collapsed 1.371 1.181
3203 175 Osmoprotectant ABC transporter ATP-binding subunit YehX 4472 130 55989 alignment trimmed tree collapsed 0.026 0.501
3204 175 Osmoprotectant ABC transporter permease protein YehY 4471 131 MS 78-1 alignment trimmed tree collapsed 0.011 0.525
3205 175 Osmoprotectant ABC transporter binding protein YehZ 4470 133 E22 alignment trimmed tree collapsed 0.057 0.584
3206 175 Periplasmic beta-glucosidase (EC 3.2.1.21) 4469 132 SE11 alignment trimmed tree collapsed 0.006 0.311
3207 175 D-Lactate dehydrogenase (EC 1.1.2.5) 4468 133 KO11 alignment trimmed tree collapsed 0.003 0.084
3208 175 Murein-DD-endopeptidase (EC 3.4.99.-) 4467 133 MS 119-7 alignment trimmed tree collapsed 0.005 2.385
3209 175 Murein-DD-endopeptidase (EC 3.4.99.-) 4467 133 F11 alignment trimmed tree collapsed 0.000 0.485
3210 175 Putative membrane protein 133 E22 alignment trimmed tree collapsed 0.000 0.478
3211 175 DedA family inner membrane protein YohD 3400 1566 3117 4464 395 TA280 alignment trimmed tree collapsed 1.980 0.772
3212 175 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) 953 972 2348 2422 2567 2654 2739 2841 3668 5287 82 412 1200 1313 1489 1793 2014 4463 4594 4678 1646 55989 alignment trimmed tree collapsed 2.046 0.389
3213 175 RND efflux system, outer membrane lipoprotein, NodT family 2101 5260 2285 2331 3434 4462 449 B088 alignment trimmed tree collapsed 0.000 0.594
3214 175 tRNA-dihydrouridine synthase C (EC 1.-.-.-) 4036 153 B7A alignment trimmed tree collapsed 0.020 0.397
3215 175 Antiholin-like protein LrgA 4037 157 APEC O1 alignment trimmed tree collapsed 1.421 0.438
3216 175 LrgA-associated membrane protein LrgB 4038 154 MS 115-1 alignment trimmed tree collapsed 0.000 0.443
3217 175 Cytidine deaminase (EC 3.5.4.5) 4039 129 O111:H- str. 11128 alignment trimmed tree collapsed 0.004 0.715
3218 175 SanA protein 2240 2794 4040 251 EC4100B alignment trimmed tree collapsed 0.000 0.900
3219 175 hypothetical protein 4041 132 CFT073 alignment trimmed tree collapsed 0.000 0.244
3220 175 Pyridine nucleotide-disulphide oxidoreductase family protein 1801 2879 494 885 1508 4413 555 B088 alignment trimmed tree collapsed 1.894 1.811
3221 175 Dihydropyrimidine dehydrogenase homolog 495 126 O111:H- str. 11128 alignment trimmed tree collapsed 0.010 0.225
3222 175 Galactose/methyl galactoside ABC transport system, permease protein MglC (TC 3.A.1.2.3) 1462 1646 2974 3992 5477 211 212 496 1855 2529 2614 924 MS 198-1 alignment trimmed tree collapsed 0.000 0.071
3223 175 Galactose/methyl galactoside ABC transport system, ATP-binding protein MglA (EC 3.6.3.17) 1461 1645 3993 5476 210 497 2530 730 UMN026 alignment trimmed tree collapsed 1.127 0.400
3224 175 Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3) 1644 2977 498 1677 2616 383 TA143 alignment trimmed tree collapsed 0.000 1.384
3225 175 Mgl repressor and galactose ultrainduction factor GalS, HTH-type transcriptional regulator 2577 2734 3714 5358 499 963 1860 1942 4361 627 55989 alignment trimmed tree collapsed 0.012 1.067
3226 175 Putative inner membrane protein 500 132 O157:H7 EDL933 alignment trimmed tree collapsed 0.006 0.445
3227 175 GTP cyclohydrolase I (EC 3.5.4.16) type 1 129 O157:H7 str. TW14359 alignment trimmed tree collapsed 0.000 0.154
3228 175 FIG00641119: hypothetical protein 31 O157:H7 str. TW14588 alignment trimmed tree collapsed 0.000 0.183
3229 175 S-formylglutathione hydrolase (EC 3.1.2.12) 5372 501 2256 266 IAI1 alignment trimmed tree collapsed 0.000 0.791
3230 175 Colicin I receptor precursor 502 217 CFT073 alignment trimmed tree collapsed 0.000 0.827
3231 175 Colicin I receptor precursor 1
3232 175 Lysine-specific permease 503 154 HS alignment trimmed tree collapsed 0.003 0.400
3233 175 hypothetical protein 1
3234 175 LysR family transcriptional regulator YeiE 994 2153 2736 2823 3008 3535 3641 5351 5493 18 504 618 781 965 2190 2646 3526 3575 4133 4342 1443 MS 21-1 alignment trimmed tree collapsed 2.196 1.336
3235 175 Putative membrane protein YeiH 129 B7A alignment trimmed tree collapsed 0.000 0.339
3236 175 Endonuclease IV (EC 3.1.21.2) 506 131 E110019 alignment trimmed tree collapsed 0.008 0.758
3237 175 Uncharacterized sugar kinase YeiI 507 134 B7A alignment trimmed tree collapsed 0.177 0.333
3238 175 Probable pyrimidine nucleoside transport protein associated with pseudouridine catabolism 2811 3241 508 511 4422 359 WV_060327 alignment trimmed tree collapsed 0.013 0.628
3239 175 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) 5002 5585 118 282 509 389 MS 78-1 alignment trimmed tree collapsed 0.000 0.369
3240 175 Predicted N-ribosylNicotinamide CRP-like regulator 510 128 O26:H11 str. 11368 alignment trimmed tree collapsed 0.037 0.442
3241 175 Inner membrane transport protein YeiM, in cluster with pseudouridine metabolism operon 2811 3238 508 511 4422 359 NC101 alignment trimmed tree collapsed 1.464 0.857
3242 175 Pseudouridine 5'-phosphate glycosidase 512 125 55989 alignment trimmed tree collapsed 0.032 0.323
3243 175 Pseudouridine kinase (EC 2.7.1.83) 3237 3543 507 513 2156 316 55989 alignment trimmed tree collapsed 0.137 0.486
3244 175 PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) 4945 514 2055 191 MS 69-1 alignment trimmed tree collapsed 0.005 0.658
3245 175 PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) 514 133 ED1a alignment trimmed tree collapsed 0.078 9.740
3246 175 1-phosphofructokinase (EC 2.7.1.56) 515 131 1827-70 alignment trimmed tree collapsed 0.000 0.199
3247 175 Fructose-specific phosphocarrier protein HPr (EC 2.7.1.69) / PTS system, fructose-specific IIA component (EC 2.7.1.69) 516 129 UTI89 alignment trimmed tree collapsed 0.000 1.811
3248 175 hypothetical protein 517 128 MS 196-1 alignment trimmed tree collapsed 0.000 0.349
3249 175 Sugar efflux transporter B 1540 5631 518 1559 3025 260 H736 alignment trimmed tree collapsed 0.003 0.805
3250 175 proteinase inhibitor 519 124 str. K-12 substr. DH10B alignment trimmed tree collapsed 0.000 0.356
3251 175 hypothetical protein 520 110 E22 alignment trimmed tree collapsed 0.000 1.578
3252 175 Translation elongation factor P-related protein 845 521 2681 227 O157:H7 str. EC4042 alignment trimmed tree collapsed 1.474 0.849
3253 175 D-mannonate oxidoreductase (EC 1.1.1.57) 732 4304 522 3793 398 55989 alignment trimmed tree collapsed 0.828 0.060
3254 175 Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family 523 132 53638 alignment trimmed tree collapsed 0.010 1.117
3255 175 Putative membrane protein 524 130 O157:H7 EDL933 alignment trimmed tree collapsed 0.009 0.943
3256 175 Lipoprotein spr precursor 525 116 TA271 alignment trimmed tree collapsed 0.005 3.142
3257 175 Rtn protein 526 1357 269 E24377A alignment trimmed tree collapsed 0.005 0.074
3258 175 ABC transporter, periplasmic substrate-binding protein 527 129 EC4100B alignment trimmed tree collapsed 0.019 3.514
3259 175 ABC transporter, periplasmic substrate-binding protein 527 132 EC4100B alignment trimmed tree collapsed 0.058 1.736
3260 175 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) 2062 2186 4564 528 1876 3381 3657 3776 607 55989 alignment trimmed tree collapsed 2.245 1.873
3261 175 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) 1
3262 175 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) 4232 4565 4676 529 2696 3382 3775 529 O157:H7 EDL933 alignment trimmed tree collapsed 1.753 1.017
3263 175 Putative ABC transporter ATP-binding protein 926 4672 530 835 3778 408 O26:H11 str. 11368 alignment trimmed tree collapsed 0.914 0.679
3264 175 Putative cytoplasmic protein 531 132 E110019 alignment trimmed tree collapsed 0.000 0.481
3265 175 MFS family multidrug transport protein, bicyclomycin resistance protein 532 1862 342 MS 198-1 alignment trimmed tree collapsed 0.006 0.789
3266 175 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) ## SSU Psi516 1050 4024 533 1985 2947 390 O26:H11 str. 11368 alignment trimmed tree collapsed 1.663 1.338
3267 175 DNA or RNA helicase of superfamily II 129 E24377A alignment trimmed tree collapsed 0.006 0.169
3268 175 LSU ribosomal protein L25p 535 134 ATCC 8739 alignment trimmed tree collapsed 0.000 0.963
3269 175 Nucleoid-associated protein NdpA 536 133 O26:H11 str. 11368 alignment trimmed tree collapsed 0.000 0.092
3270 175 FIG002927: hypothetical protein 537 135 O157:H7 EDL933 alignment trimmed tree collapsed 0.000 0.225
3271 175 FIG001881: hydrolase of alkaline phosphatase superfamily 538 132 B171 alignment trimmed tree collapsed 0.002 0.759
3272 175 hypothetical protein 14 1827-70 alignment trimmed tree collapsed 0.000 0.476
3273 175 Putative ATP-binding component of a transport system 4484 539 1001 294 1125A alignment trimmed tree collapsed 0.480 0.305
3274 175 Putative ATP-binding component of a transport system 539 143 SE11 alignment trimmed tree collapsed 0.949 0.713
3275 175 Nitrate/nitrite response regulator protein 820 1553 2783 3199 3304 3445 3976 3977 4540 5242 239 336 337 540 567 675 1024 2037 2394 4476 1404 W alignment trimmed tree collapsed 1.415 2.076
3276 175 Nitrate/nitrite response regulator protein 1553 2755 2783 3445 4540 5242 239 540 675 1024 2394 829 E110019 alignment trimmed tree collapsed 1.972 1.331
3277 175 Cytochrome c heme lyase subunit CcmL / Cytochrome c heme lyase subunit CcmH 541 128 B171 alignment trimmed tree collapsed 0.018 0.005
3278 175 Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase 542 130 MS 146-1 alignment trimmed tree collapsed 0.006 0.319
3279 175 Cytochrome c heme lyase subunit CcmF 543 139 MS 116-1 alignment trimmed tree collapsed 0.000 0.298
3280 175 Cytochrome c-type biogenesis protein CcmE, heme chaperone 544 132 O157:H7 str. FRIK2000 alignment trimmed tree collapsed 0.000 0.301
3281 175 Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE 545 133 MS 175-1 alignment trimmed tree collapsed 0.000 0.123
3282 175 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE 546 128 APEC O1 alignment trimmed tree collapsed 0.000 0.184
3283 175 ABC transporter involved in cytochrome c biogenesis, CcmB subunit 547 134 O157:H7 str. EC869 alignment trimmed tree collapsed 0.000 0.440
3284 175 ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA 1150 1461 1787 2048 2065 2071 2183 2837 2976 3086 3203 3448 3993 4444 4726 4732 4733 4919 4931 5476 5625 5718 4 92 210 418 419 450 548 623 872 1565 1834 1869 1873 1890 2082 2530 2615 3654 3710 4472 4573 4758 3210 MS 182-1 alignment trimmed tree collapsed 2.727 0.978
3285 175 Cytochrome c-type protein NapC 4603 549 3307 298 55989 alignment trimmed tree collapsed 0.005 0.319
3286 175 Nitrate reductase cytochrome c550-type subunit 550 134 E22 alignment trimmed tree collapsed 0.007 0.904
3287 175 Polyferredoxin NapH (periplasmic nitrate reductase) 551 212 E110019 alignment trimmed tree collapsed 1.597 0.771
3288 175 Ferredoxin-type protein NapG (periplasmic nitrate reductase) 552 130 55989 alignment trimmed tree collapsed 0.009 4.454
3289 175 Periplasmic nitrate reductase precursor (EC 1.7.99.4) 3633 3634 4742 553 773 2358 2359 451 55989 alignment trimmed tree collapsed 2.072 1.691
3290 175 Periplasmic nitrate reductase component NapD 554 132 H591 alignment trimmed tree collapsed 0.012 0.583
3291 175 Ferredoxin-type protein NapF (periplasmic nitrate reductase) 3288 552 555 262 O55:H7 str. CB9615 alignment trimmed tree collapsed 0.000 1.091
3292 175 FIG00640960: hypothetical protein 556 62 TA271 alignment trimmed tree collapsed 0.019 0.621
3293 175 Proteinase inhibitor I11, ecotin precursor 557 133 MS 200-1 alignment trimmed tree collapsed 0.007 1.043
3294 175 Malate:quinone oxidoreductase (EC 1.1.99.16) 558 132 55989 alignment trimmed tree collapsed 0.002 0.301
3295 175 Putative ATP-binding component of a transport system 3513 4765 5142 559 1401 2564 3292 443 55989 alignment trimmed tree collapsed 3.104 1.022
3296 175 Alkylated DNA repair protein AlkB 560 127 55989 alignment trimmed tree collapsed 0.049 0.166
3297 175 ADA regulatory protein / Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) 561 131 MS 182-1 alignment trimmed tree collapsed 0.011 0.466
3298 175 FIG00641540: hypothetical protein 17 55989 alignment trimmed tree collapsed 0.223 0.644
3299 175 Thiamin biosynthesis lipoprotein ApbE 562 131 55989 alignment trimmed tree collapsed 0.009 0.553
3300 175 Outer membrane protein C precursor 4782 4840 5404 563 1371 1839 3089 613 55989 alignment trimmed tree collapsed 0.879 0.168
3301 175 FIG00638744: hypothetical protein 564 47 TA143 alignment trimmed tree collapsed 0.014 0.716
3302 175 Two-component sensor protein RcsD (EC 2.7.3.-) 565 127 SE11 alignment trimmed tree collapsed 0.005 1.190
3303 175 DNA-binding capsular synthesis response regulator RcsB 1553 2152 3445 5242 239 540 566 619 675 755 APEC O1 alignment trimmed tree collapsed 2.156 0.299
3304 175 Two-component sensor protein RcsC (EC 2.7.3.-) 2785 567 2393 291 O157:H7 str. TW14359 alignment trimmed tree collapsed 1.908 0.348
3305 175 Two-component sensor protein RcsC (EC 2.7.3.-) 567 130 O103:H2 str. 12009 alignment trimmed tree collapsed 0.003 1.064
3306 175 COG4676: Uncharacterized protein conserved in bacteria 568 131 55989 alignment trimmed tree collapsed 0.004 0.577
3307 175 hypothetical protein 569 98 55989 alignment trimmed tree collapsed 0.010 0.504
3308 175 Putative membrane protein 570 101 55989 alignment trimmed tree collapsed 0.035 3.059
3309 175 hypothetical protein 122 55989 alignment trimmed tree collapsed 0.040 0.256
3310 175 hypothetical protein 571 102 55989 alignment trimmed tree collapsed 0.013 0.882
3311 175 DNA gyrase subunit A (EC 5.99.1.3) 572 130 str. K-12 substr. DH10B alignment trimmed tree collapsed 0.004 1.005
3312 175 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64) 573 129 O111:H- str. 11128 alignment trimmed tree collapsed 0.004 0.136
3313 175 Putative ATP-binding component of a transport system 574 134 B088 alignment trimmed tree collapsed 0.047 0.262
3314 175 Putative ATP-binding component of a transport system 574 129 B088 alignment trimmed tree collapsed 0.257 0.713
3315 175 Ribonucleotide reductase of class Ia (aerobic), alpha subunit (EC 1.17.4.1) 133 O157:H7 EDL933 alignment trimmed tree collapsed 0.003 0.135
3316 175 Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) 644 134 UTI89 alignment trimmed tree collapsed 0.000 0.128
3317 175 FIG001676: Ferredoxin 3879 4719 643 1344 3855 371 ED1a alignment trimmed tree collapsed 1.143 0.988
3318 175 Protein inaA 130 E110019 alignment trimmed tree collapsed 0.033 0.155
3319 175 LysR family transcriptional regulator STM2281 3666 95 E24377A alignment trimmed tree collapsed 0.109 1.370
3320 175 Glycerophosphoryl diester phosphodiesterase, periplasmic (EC 3.1.4.46) 3665 126 O157:H7 str. EC4206 alignment trimmed tree collapsed 0.009 0.917
3321 175 Glycerol-3-phosphate transporter 672 308 O157:H7 str. EC4401 alignment trimmed tree collapsed 2.790 0.491
3322 175 Anaerobic glycerol-3-phosphate dehydrogenase subunit A (EC 1.1.5.3) 130 MS 182-1 alignment trimmed tree collapsed 0.008 0.826
3323 175 Anaerobic glycerol-3-phosphate dehydrogenase subunit B (EC 1.1.5.3) 127 B171 alignment trimmed tree collapsed 0.032 0.716
3324 175 Anaerobic glycerol-3-phosphate dehydrogenase subunit C (EC 1.1.5.3) 2313 3675 4051 232 B171 alignment trimmed tree collapsed 1.602 0.854
3325 175 Uncharacterized protein YfaD 378 755 1988 3386 50 2422 2690 3105 4052 592 B7A alignment trimmed tree collapsed 0.018 0.617
3326 175 Uncharacterized protein YfaU 1705 743 4053 266 MS 119-7 alignment trimmed tree collapsed 1.030 0.904
3327 175 Competence/damage-inducible protein CinA 4054 130 MS 84-1 alignment trimmed tree collapsed 0.011 0.635
3328 175 Uncharacterized protein YfaZ precursor 4055 132 042 alignment trimmed tree collapsed 0.006 0.311
3329 175 Pyrimidine deoxynucleoside triphosphate (dYTP) pyrophosphohydrolase YfoO 3826 307 4056 167 W alignment trimmed tree collapsed 1.659 1.220
3330 175 Polymyxin resistance protein PmrG; Ais protein 590 4057 4906 138 B354 alignment trimmed tree collapsed 0.016 0.289
3331 175 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC 2.6.1.-) 1411 1099 4058 307 ATCC 8739 alignment trimmed tree collapsed 1.600 0.514
3332 175 Polymyxin resistance protein ArnC, glycosyl transferase (EC 2.4.-.-) 1
3333 175 Polymyxin resistance protein ArnA_DH, UDP-glucuronic acid decarboxylase (EC 4.1.1.-) / Polymyxin resistance protein ArnA_FT, UDP-4-amino-4-deoxy-L-arabinose formylase (EC 2.1.2.-) 4060 131 MS 119-7 alignment trimmed tree collapsed 0.002 0.683
3334 175 Polymyxin resistance protein PmrJ, predicted deacetylase 4061 133 IAI1 alignment trimmed tree collapsed 0.018 0.853
3335 175 Polymyxin resistance protein ArnT, undecaprenyl phosphate-alpha-L-Ara4N transferase; Melittin resistance protein PqaB 4062 129 55989 alignment trimmed tree collapsed 0.022 0.540
3336 175 Polymyxin resistance protein PmrL, sucrose-6 phosphate hydrolase 4063 129 55989 alignment trimmed tree collapsed 0.010 0.343
3337 175 Polymyxin resistance protein PmrM 4064 127 CFT073 alignment trimmed tree collapsed 0.017 0.236
3338 175 Polymyxin resistance protein PmrD 132 E110019 alignment trimmed tree collapsed 0.058 0.189
3339 175 O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26) 5285 414 2131 274 55989 alignment trimmed tree collapsed 0.007 0.004
3340 175 O-succinylbenzoate-CoA synthase (EC 4.2.1.-) 2132 132 EC4100B alignment trimmed tree collapsed 0.008 0.920
3341 175 Naphthoate synthase (EC 4.1.3.36) 2133 132 H736 alignment trimmed tree collapsed 0.000 0.675
3342 175 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC 4.2.99.20) 2134 131 E22 alignment trimmed tree collapsed 0.000 1.200
3343 175 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9) 2135 131 H591 alignment trimmed tree collapsed 0.014 0.012
3344 175 Menaquinone-specific isochorismate synthase (EC 5.4.4.2) 2136 129 MS 200-1 alignment trimmed tree collapsed 0.014 0.781
3345 175 ElaB protein 2257 3081 2137 3698 396 str. K-12 substr. DH10B alignment trimmed tree collapsed 1.339 0.940
3346 175 Acetyltransferase (EC 2.3.1.-) 2138 129 str. K-12 substr. DH10B alignment trimmed tree collapsed 0.144 0.669
3347 175 Ribonuclease Z (EC 3.1.26.11) 2139 131 MS 182-1 alignment trimmed tree collapsed 0.004 0.500
3348 175 hypothetical protein 24 TA271 alignment trimmed tree collapsed 0.047 0.570
3349 175 ElaD protein 2140 89 E24377A alignment trimmed tree collapsed 0.089 0.166
3350 175 ElaD protein 2140 92 E24377A alignment trimmed tree collapsed 0.031 0.176
3351 175 hypothetical protein 3667 135 B088 alignment trimmed tree collapsed 0.052 1.024
3352 175 hypothetical protein 3668 128 MS 115-1 alignment trimmed tree collapsed 0.011 1.113
3353 175 NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) 3669 125 O83:H1 str. NRG 857C alignment trimmed tree collapsed 0.003 0.094
3354 175 NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) 128 55989 alignment trimmed tree collapsed 0.002 1.097
3355 175 NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) 4931 133 55989 alignment trimmed tree collapsed 0.006 1.678
3356 175 NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3) 4932 134 O157:H7 str. EC4115 alignment trimmed tree 0.000 0.000
3357 175 NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3) 4933 134 1827-70 alignment trimmed tree collapsed 0.000 0.235
3358 175 NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) 4934 133 BL21 alignment trimmed tree collapsed 0.000 0.095
3359 175 NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) 4935 132 HS alignment trimmed tree collapsed 0.000 0.536
3360 175 NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) 132 W alignment trimmed tree collapsed 0.000 0.433
3361 175 NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) 3173 131 MS 107-1 alignment trimmed tree collapsed 0.000 0.559
3362 175 NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) 3172 134 2362-75 alignment trimmed tree collapsed 0.000 0.527
3363 175 NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) / NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3) 2588 2415 3171 273 MS 115-1 alignment trimmed tree collapsed 1.549 0.969
3364 175 NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) 3170 134 1827-70 alignment trimmed tree 0.000 0.000
3365 175 NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) 3170 134 1827-70 alignment trimmed tree collapsed 0.000 0.372
3366 175 NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) 3169 130 W alignment trimmed tree collapsed 0.000 0.204
3367 175 FIG00639128: hypothetical protein 33 MS 198-1 alignment trimmed tree collapsed 0.000 1.158
3368 175 LysR family transcriptional regulator lrhA 1781 134 ABU 83972 alignment trimmed tree collapsed 0.003 1.034
3369 175 Aspartate/tyrosine/aromatic aminotransferase 1782 133 HS alignment trimmed tree collapsed 0.003 0.532
3370 175 Nucleotidase YfbR, HD superfamily 127 B354 alignment trimmed tree collapsed 0.000 0.857
3371 175 Putative transport protein 1784 132 HS alignment trimmed tree collapsed 0.004 0.634
3372 175 Putative phosphatase YfbT 3790 857 1439 1785 404 O157:H7 str. TW14588 alignment trimmed tree collapsed 2.411 0.697
3373 175 UPF0304 protein yfbU 1786 133 M718 alignment trimmed tree collapsed 0.000 0.236
3374 175 hypothetical protein 1787 128 MS 116-1 alignment trimmed tree collapsed 0.000 0.363
3375 175 hypothetical protein 1788 123 str. K-12 substr. DH10B alignment trimmed tree collapsed 0.000 0.226
3376 175 Acetate kinase (EC 2.7.2.1) 1692 1789 3959 256 MS 196-1 alignment trimmed tree collapsed 0.003 0.422
3377 175 Phosphate acetyltransferase (EC 2.3.1.8) 131 55989 alignment trimmed tree collapsed 0.000 0.536
3378 175 Putative S-transferase 3098 131 B171 alignment trimmed tree collapsed 0.071 4.925
3379 175 Putative S-transferase 3098 156 ATCC 8739 alignment trimmed tree collapsed 0.015 0.419
3380 175 Putative Nudix hydrolase YfcD (EC 3.6.-.-) 3099 133 F11 alignment trimmed tree collapsed 0.000 0.132
3381 175 Phosphodiesterase yfcE (EC 3.1.4.-) 3100 134 K12 alignment trimmed tree collapsed 0.006 2.732
3382 175 Probable glutathione S-transferase (EC 2.5.1.18), YfcF homolog 3101 128 55989 alignment trimmed tree collapsed 0.005 0.874
3383 175 Probable glutathione S-transferase (EC 2.5.1.18), YfcG homolog 2331 3102 3518 270 MS 182-1 alignment trimmed tree collapsed 0.005 0.200
3384 175 Dihydroneopterin triphosphate epimerase 2210 3103 4441 264 IAI1 alignment trimmed tree collapsed 1.649 0.873
3385 175 Cell division inhibitor 3104 132 str. K-12 substr. MG1655 alignment trimmed tree collapsed 0.014 0.955
3386 175 Uncharacterized protein yfcI 378 755 1988 3325 50 2422 2690 3105 4052 592 IAI1 alignment trimmed tree collapsed 0.580 1.173
3387 175 Histidine ABC transporter, ATP-binding protein HisP (TC 3.A.1.3.1) 1142 1150 1781 1857 2032 2038 2183 2184 2837 3086 3203 3448 4052 4082 4183 4230 4231 4453 4566 4567 4672 4701 4710 4919 5003 5555 5625 4 92 283 623 866 1438 1565 1710 1834 1899 1905 2273 2517 2697 2698 2929 3106 3286 3358 3383 3384 3654 3655 3778 3838 3847 4472 4758 4790 4843 4064 SE15 alignment trimmed tree collapsed 1.768 1.199
3388 175 Histidine ABC transporter, permease protein HisM (TC 3.A.1.3.1) 3389 3449 4708 5004 284 285 624 3107 3108 778 101-1 alignment trimmed tree collapsed 1.998 0.002
3389 175 Histidine ABC transporter, permease protein HisQ (TC 3.A.1.3.1) 1857 3388 4707 4708 4920 5004 284 285 1835 2518 3107 3108 3844 1046 UTI89 alignment trimmed tree collapsed 2.151 0.695
3390 175 Histidine ABC transporter, histidine-binding periplasmic protein precursor HisJ (TC 3.A.1.3.1) 3392 3451 4706 4709 626 3109 3110 3843 3846 667 MS 198-1 alignment trimmed tree collapsed 0.444 0.416
3391 175 Histidine ABC transporter, histidine-binding periplasmic protein precursor HisJ (TC 3.A.1.3.1) 3392 4706 4709 4921 1836 3110 3843 3846 532 O55:H7 str. CB9615 alignment trimmed tree collapsed 0.000 5.426
3392 175 Lysine-arginine-ornithine-binding periplasmic protein precursor (TC 3.A.1.3.1) 3451 4706 4709 4921 626 1836 3110 3843 3846 657 UMN026 alignment trimmed tree collapsed 0.000 0.111
3393 175 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX (EC 4.1.1.-) 2614 3111 3198 210 MS 145-7 alignment trimmed tree collapsed 0.717 0.776
3394 175 Amidophosphoribosyltransferase (EC 2.4.2.14) 3112 134 55989 alignment trimmed tree collapsed 0.004 2.028
3395 175 Colicin V production protein 1
3396 175 DedD protein 3114 133 O26:H11 str. 11368 alignment trimmed tree collapsed 0.015 0.714
3397 175 Dihydrofolate synthase (EC 6.3.2.12) / Folylpolyglutamate synthase (EC 6.3.2.17) 3115 131 55989 alignment trimmed tree collapsed 0.011 0.786
3398 175 Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2) 3116 134 APEC O1 alignment trimmed tree collapsed 0.000 0.253
3399 175 Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2) 1
3400 175 DedA protein 3117 133 MS 78-1 alignment trimmed tree collapsed 0.065 2.170
3401 175 tRNA pseudouridine synthase A (EC 4.2.1.70) ## tRNA Psi38, Psi39 and Psi40 3118 134 W alignment trimmed tree collapsed 0.004 0.354
3402 175 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) 1750 3119 267 55989 alignment trimmed tree collapsed 2.317 0.315
3403 175 hypothetical protein 3120 115 O157:H7 str. FRIK2000 alignment trimmed tree collapsed 0.000 0.386
3404 175 Erythronate-4-phosphate dehydrogenase (EC 1.1.1.290) 3121 130 55989 alignment trimmed tree collapsed 0.014 0.299
3405 175 Cell division protein 3122 133 M718 alignment trimmed tree collapsed 0.022 0.139
3406 175 Transporter, putative 2058 1880 3123 273 W alignment trimmed tree collapsed 0.015 0.423
3407 175 Transporter, putative 1
3408 175 3-oxoacyl-[acyl-carrier-protein] synthase, KASI (EC 2.3.1.41) 4419 1311 3124 322 B354 alignment trimmed tree collapsed 1.220 0.595
3409 175 5-methylaminomethyl-2-thiouridine-forming enzyme mnmC 3125 131 55989 alignment trimmed tree collapsed 0.048 0.610
3410 175 hypothetical protein 3126 134 O157:H7 str. EC508 alignment trimmed tree collapsed 0.011 0.519
3411 175 Putative transporting ATPase 3127 134 2362-75 alignment trimmed tree collapsed 0.000 1.351
3412 175 Putative membrane protein YfcA 3128 134 str. K-12 substr. MG1655 alignment trimmed tree collapsed 0.008 0.578
3413 175 Murein endopeptidase 3129 133 MS 145-7 alignment trimmed tree collapsed 0.026 1.922
3414 175 Chorismate synthase (EC 4.2.3.5) 3130 133 TA271 alignment trimmed tree collapsed 0.000 0.261
3415 175 Ribosomal protein L3 methyltransferase 3131 132 BL21 alignment trimmed tree collapsed 0.014 0.310
3416 175 FIG001674: hypothetical protein 3132 130 O55:H7 str. CB9615 alignment trimmed tree collapsed 0.007 0.099
3417 175 FIG001674: hypothetical protein 3132 132 55989 alignment trimmed tree collapsed 0.008 0.175
3418 175 Transposase 2580 4780 5370 4816 249 O103:H2 str. 12009 alignment trimmed tree collapsed 0.000 0.262
3419 175 Uncharacterized protein YadU in stf fimbrial cluster 587 114 55989 alignment trimmed tree collapsed 1.225 0.884
3420 175 Minor fimbrial subunit StfG 2195 4255 4801 5236 234 588 1599 2149 768 E22 alignment trimmed tree collapsed 2.169 0.286
3421 175 Minor fimbrial subunit StfF 589 169 MS 182-1 alignment trimmed tree collapsed 0.000 0.732
3422 175 Minor fimbrial subunit StfE 3421 589 590 272 B088 alignment trimmed tree collapsed 0.571 0.769
3423 175 Periplasmic fimbrial chaperone StfD 2198 4257 4796 5237 235 591 1601 4211 4744 562 IAI1 alignment trimmed tree collapsed 1.970 0.196
3424 175 Fimbriae usher protein StfC 592 149 B7A alignment trimmed tree collapsed 0.287 0.968
3425 175 Fimbriae usher protein StfC 93 O157:H7 str. EC4196 alignment trimmed tree collapsed 1.473 9.586
3426 175 Fimbriae usher protein StfC 592 4925 344 1827-70 alignment trimmed tree collapsed 1.976 0.605
3427 175 Major fimbrial subunit StfA 1725 2191 2195 2196 4933 172 593 2127 2149 3661 4213 602 E110019 alignment trimmed tree collapsed 0.385 0.206
3428 175 Phosphohistidine phosphatase SixA 3492 134 KO11 alignment trimmed tree collapsed 0.019 0.875
3429 175 Enoyl-CoA hydratase (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) 3494 134 HS alignment trimmed tree collapsed 0.038 0.302
3430 175 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) 1256 2742 4137 792 2012 3495 3631 527 55989 alignment trimmed tree collapsed 1.675 1.510
3431 175 hypothetical protein 1338 1148 3496 267 HS alignment trimmed tree collapsed 0.000 0.352
3432 175 Long-chain fatty acid transport protein 3497 132 E110019 alignment trimmed tree collapsed 0.000 0.438
3433 175 hypothetical protein 3498 52 55989 alignment trimmed tree collapsed 0.003 0.807
3434 175 Lipoprotein 3499 129 O55:H7 str. CB9615 alignment trimmed tree collapsed 0.000 0.596
3435 175 hypothetical protein 3500 121 DH1 alignment trimmed tree collapsed 0.000 0.228
3436 175 putative transport 3501 126 O157:H7 EDL933 alignment trimmed tree collapsed 0.010 0.836
3437 175 Phage integrase 393 832 2500 3509 5408 1533 3044 3503 4073 546 IHE3034 alignment trimmed tree collapsed 1.706 0.129
3438 175 FIG00642000: hypothetical protein 4 55989 alignment trimmed tree collapsed 0.000 0.577
3439 175 FIG00642000: hypothetical protein 3504 4 55989 alignment trimmed tree collapsed 0.014 1.732
3440 175 Phage tail fibers 3505 4 55989 alignment trimmed tree collapsed 0.000 0.000
3441 176 glycosyl transferase, group 1 1
3442 177 FIG00638476: hypothetical protein 8 DH1 alignment trimmed tree collapsed 0.000 0.586
3443 177 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) 712 110 CFT073 alignment trimmed tree collapsed 0.006 3.237
3444 177 Excinuclease ABC subunit C 711 110 MS 45-1 alignment trimmed tree collapsed 0.000 0.489
3445 177 BarA-associated response regulator UvrY (= GacA = SirA) 1553 2783 3303 5242 239 540 566 675 2394 759 55989 alignment trimmed tree collapsed 1.672 0.536
3446 177 Putative cytoplasmic protein 621 127 MS 146-1 alignment trimmed tree collapsed 0.000 0.495
3447 177 N-3-oxohexanoyl-L-homoserine lactone quorum-sensing transcriptional activator @ N-3-oxooctanoyl-L-homoserine lactone quorum-sensing transcriptional activator ## Regulatory activator SdiA 622 125 MS 84-1 alignment trimmed tree collapsed 0.026 1.970
3448 177 Cystine ABC transporter, ATP-binding protein 1142 1461 1787 1857 2032 2183 2837 3203 3263 3387 4082 4183 4230 4453 4567 4672 4701 4710 4726 4919 5003 5380 5555 5687 4 283 530 623 872 1438 1710 1834 1905 2273 2517 2530 2698 2709 2929 3106 3358 3384 3654 3778 3838 3847 4472 4573 4790 4843 4911 3515 str. K-12 substr. MG1655 alignment trimmed tree collapsed 2.030 1.348
3449 177 Cystine ABC transporter, permease protein 1856 1857 3388 3389 4707 4708 4920 5004 284 285 624 1835 2518 2519 3107 3108 3844 1194 HS alignment trimmed tree collapsed 1.601 1.911
3450 177 D-cysteine desulfhydrase (EC 4.4.1.15) 625 121 MS 182-1 alignment trimmed tree collapsed 0.000 0.893
3451 177 Cystine ABC transporter, periplasmic cystine-binding protein FliY 3392 4709 4921 626 1836 3110 3846 522 MS 196-1 alignment trimmed tree collapsed 1.763 0.189
3452 177 Flagellar biosynthesis protein FliZ 627 127 55989 alignment trimmed tree collapsed 0.023 0.122
3453 177 RNA polymerase sigma factor for flagellar operon 628 155 W alignment trimmed tree collapsed 0.000 0.426
3454 177 Flagellar biosynthesis protein FliC 629 42 M605 alignment trimmed tree collapsed 1.393 0.698
3455 177 Flagellar hook-associated protein FliD 630 124 MS 84-1 alignment trimmed tree collapsed 0.221 0.318
3456 177 Flagellar biosynthesis protein FliS 631 155 55989 alignment trimmed tree collapsed 0.015 0.451
3457 177 Flagellar biosynthesis protein FliT 632 130 55989 alignment trimmed tree collapsed 0.025 0.415
3458 177 Cytoplasmic alpha-amylase (EC 3.2.1.1) 633 131 MS 175-1 alignment trimmed tree collapsed 0.002 1.164
3459 177 Putative lipoprotein 634 129 ATCC 8739 alignment trimmed tree collapsed 0.000 0.513
3460 177 Putative transport system permease protein 635 127 HS alignment trimmed tree collapsed 0.006 0.564
3461 177 hypothetical protein 2055 3587 636 1282 1883 366 MS 200-1 alignment trimmed tree collapsed 1.954 1.349
3462 177 Gifsy-2 prophage protein 11 55989 alignment trimmed tree collapsed 0.000 0.013
3463 177 Transcriptional regulator, AraC/XylS family 80 HS alignment trimmed tree collapsed 0.012 1.279
3464 177 hypothetical protein 4232 39 MS 196-1 alignment trimmed tree collapsed 0.107 0.303
3465 177 Ethidium bromide-methyl viologen resistance protein EmrE 848 3646 3647 2678 3530 3531 4233 549 CFT073 alignment trimmed tree collapsed 1.746 1.141
3466 177 Flagellar hook-basal body complex protein FliE 4234 129 MS 124-1 alignment trimmed tree collapsed 0.009 0.175
3467 177 Flagellar M-ring protein FliF 1
3468 177 Flagellar M-ring protein FliF 4235 131 H736 alignment trimmed tree collapsed 0.012 1.024
3469 177 Flagellar motor switch protein FliG 4236 153 HS alignment trimmed tree collapsed 0.000 0.442
3470 177 Flagellar assembly protein FliH 4237 156 EC4100B alignment trimmed tree collapsed 1.992 0.442
3471 177 Flagellum-specific ATP synthase FliI 4238 189 E2348/69 alignment trimmed tree collapsed 0.880 0.670
3472 177 Flagellar protein FliJ 4239 131 IAI1 alignment trimmed tree collapsed 0.000 0.511
3473 177 Flagellar hook-length control protein FliK 4240 131 MS 182-1 alignment trimmed tree collapsed 0.036 0.387
3474 177 Flagellar biosynthesis protein FliL 4241 129 MS 145-7 alignment trimmed tree collapsed 0.000 0.630
3475 177 Flagellar motor switch protein FliM 4242 131 E2348/69 alignment trimmed tree collapsed 0.000 0.090
3476 177 Flagellar motor switch protein FliN 4243 131 53638 alignment trimmed tree collapsed 0.000 0.696
3477 177 Flagellar biosynthesis protein FliO 4244 124 WV_060327 alignment trimmed tree collapsed 0.027 0.850
3478 177 Flagellar biosynthesis protein FliP 4245 128 B7A alignment trimmed tree collapsed 0.000 0.738
3479 177 Flagellar biosynthesis protein FliQ 4246 144 IAI39 alignment trimmed tree collapsed 0.000 0.317
3480 177 Flagellar biosynthesis protein FliR 4247 129 53638 alignment trimmed tree collapsed 0.012 1.293
3481 177 DsrB protein 1
3482 177 putative cytoplasmic protein 4250 119 042 alignment trimmed tree collapsed 0.000 0.092
3483 177 Putative mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70) 1668 126 H299 alignment trimmed tree collapsed 0.015 0.652
3484 177 hypothetical protein 1667 124 DH1 alignment trimmed tree collapsed 0.008 0.398
3485 177 hypothetical protein 1667 127 MS 198-1 alignment trimmed tree collapsed 0.020 0.365
3486 177 hypothetical protein 1666 122 M605 alignment trimmed tree collapsed 0.000 0.669
3487 177 Putative inner membrane protein 1665 127 55989 alignment trimmed tree collapsed 0.004 0.143
3488 177 Permease of the drug/metabolite transporter (DMT) superfamily 1366 4294 1664 2861 4284 362 EC4100B alignment trimmed tree collapsed 0.004 1.258
3489 177 Very-short-patch mismatch repair endonuclease (G-T specific) 1663 125 ATCC 8739 alignment trimmed tree collapsed 0.053 0.652
3490 177 DNA-cytosine methyltransferase (EC 2.1.1.37) 1662 131 2362-75 alignment trimmed tree collapsed 0.007 0.207
3491 177 metal-dependent phosphohydrolase 1661 123 MS 196-1 alignment trimmed tree collapsed 0.035 0.743
3492 177 hypothetical protein 1660 86 str. K-12 substr. DH10B alignment trimmed tree collapsed 0.011 0.851
3493 177 Outer membrane protein F precursor 3300 4113 4782 4840 5404 563 1327 1371 1839 3089 3671 783 55989 alignment trimmed tree collapsed 0.728 0.861
3494 177 Outer membrane protein F precursor 3300 4113 4782 4840 5404 563 1327 1371 1839 3089 752 042 alignment trimmed tree collapsed 1.424 2.748
3495 177 orf, conserved hypothetical protein 2511 102 101-1 alignment trimmed tree collapsed 1.167 0.970
3496 177 hypothetical protein 821 8 TA271 alignment trimmed tree collapsed 0.000 0.378
3497 177 COG2801: Transposase and inactivated derivatives 4337 3483 1107 101-1 alignment trimmed tree collapsed 2.068 1.033
3498 177 FIG00638076: hypothetical protein 64 O157:H7 str. EC4206 alignment trimmed tree collapsed 0.039 0.276
3499 177 Insertion element IS1 protein insB 105 650 655 727 1356 2111 2317 2676 3197 3909 4596 4640 4980 5064 512 ETEC H10407 alignment trimmed tree collapsed 1.501 0.510
3500 177 IS1 orfA 106 276 651 728 2110 2318 3196 3908 4477 4979 5065 5199 4747 4813 779 B171 alignment trimmed tree collapsed 0.029 0.292
3501 177 Chaperone protein hchA 2395 121 55989 alignment trimmed tree collapsed 0.011 0.126
3502 177 Putative two component system histidine kinase YedV 2396 127 K12 alignment trimmed tree collapsed 0.028 0.123
3503 177 Putative two-component system response regulator YedW 2397 96 MS 124-1 alignment trimmed tree collapsed 0.019 0.429
3504 177 Transthyretin family protein 2398 132 ED1a alignment trimmed tree collapsed 0.000 0.117
3505 177 Putative sulfite oxidase subunit YedY 2399 128 55989 alignment trimmed tree collapsed 0.019 1.287
3506 177 FIG001196: putative membrane protein 2400 127 B str. REL606 alignment trimmed tree collapsed 0.016 1.154
3507 177 Candidate zinc-binding lipoprotein ZinT 2401 128 E110019 alignment trimmed tree collapsed 0.010 0.847
3508 177 Putative inner membrane protein 2402 104 53638 alignment trimmed tree collapsed 0.009 0.083
3509 177 Integrase 393 832 2500 3437 5408 1533 3044 3503 4073 555 MS 198-1 alignment trimmed tree collapsed 1.013 0.367
3510 177 Salicylate synthetase (EC:4.1.3.27) 3289 50 E110019 alignment trimmed tree collapsed 0.021 0.085
3511 177 Putative signal transducer 3290 48 APEC O1 alignment trimmed tree collapsed 0.008 0.655
3512 177 Inner membrane ABC-transporter YbtQ 4765 5141 1400 2564 3291 290 MS 84-1 alignment trimmed tree collapsed 1.499 1.894
3513 177 Lipoprotein inner membrane ABC-transporter precursor 3292 50 55989 alignment trimmed tree collapsed 0.006 0.686
3514 177 iron aquisition regulator (YbtA,AraC-like,required for transcription of FyuA/psn,Irp2) 3293 50 MS 69-1 alignment trimmed tree collapsed 0.010 0.763
3515 177 iron aquisition yersiniabactin synthesis enzyme (Irp2) 44 E110019 alignment trimmed tree collapsed 0.002 0.098
3516 177 iron aquisition yersiniabactin synthesis enzyme (Irp1,polyketide synthetase) 44 55989 alignment trimmed tree collapsed 0.004 0.279
3517 177 iron aquisition yersiniabactin synthesis enzyme (Irp1,polyketide synthetase) 43 APEC O1 alignment trimmed tree collapsed 0.005 0.135
3518 177 iron aquisition yersiniabactin synthesis enzyme (Irp1,polyketide synthetase) 49 55989 alignment trimmed tree collapsed 0.010 3.136
3519 177 iron aquisition yersiniabactin synthesis enzyme (Irp1,polyketide synthetase) 4755 48 55989 alignment trimmed tree collapsed 0.017 1.110
3520 177 iron aquisition yersiniabactin synthesis enzyme (Irp3) 49 042 alignment trimmed tree collapsed 0.006 0.541
3521 177 iron aquisition yersiniabactin synthesis enzyme (YbtT,resembles thioesterases) 43 UM146 alignment trimmed tree collapsed 0.000 0.719
3522 177 iron aquisition 2,3-dihydroxybenzoate-AMP ligase (EC 2.7.7.58,Irp5) 3761 3881 5277 5285 414 1346 1813 2468 4206 526 55989 alignment trimmed tree collapsed 1.094 0.210
3523 177 iron aquisition outermembrane yersiniabactin receptor (FyuA,Psn,pesticin receptor) 1199 5274 1810 3442 4207 225 55989 alignment trimmed tree collapsed 1.560 0.278
3524 177 Invasin 2827 41 M605 alignment trimmed tree collapsed 0.016 1.801
3525 177 Invasin 2828 124 O26:H11 str. 11368 alignment trimmed tree collapsed 0.100 2.877
3526 177 Invasin 2829 122 S88 alignment trimmed tree collapsed 0.000 0.547
3527 177 Invasin 2829 149 55989 alignment trimmed tree collapsed 0.210 0.434
3528 177 hypothetical protein 2830 125 55989 alignment trimmed tree collapsed 0.006 0.108
3529 177 Shikimate transporter 1155 1292 2155 616 1255 2831 3750 501 MS 84-1 alignment trimmed tree collapsed 1.219 0.252
3530 177 AMP nucleosidase (EC 3.2.2.4) 2832 128 FVEC1302 alignment trimmed tree collapsed 0.003 0.044
3531 177 FIG007491: hypothetical protein YeeN 3955 1717 2147 261 B185 alignment trimmed tree collapsed 0.000 0.961
3532 177 hypothetical protein 1
3533 177 Putative inner membrane protein 615 104 MS 198-1 alignment trimmed tree collapsed 0.008 0.104
3534 177 Putative inner membrane protein 1
3535 177 Alkanesulfonate utilization operon LysR-family regulator CbI 1
3536 177 Nitrogen assimilation regulatory protein Nac 2736 2817 782 965 329 MS 175-1 alignment trimmed tree collapsed 0.013 0.930
3537 177 L,D-transpeptidase ErfK 3735 4930 3709 3885 380 55989 alignment trimmed tree collapsed 0.013 0.690
3538 177 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) 2164 128 55989 alignment trimmed tree collapsed 0.030 0.072
3539 177 Cobalamin synthase 2165 132 B088 alignment trimmed tree collapsed 0.013 1.067
3540 177 Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62) 2166 129 O157:H7 str. TW14588 alignment trimmed tree collapsed 0.006 0.979
3541 177 hypothetical protein 2167 96 536 alignment trimmed tree collapsed 0.000 0.132
3542 177 Transposase 116 117 207 680 713 981 983 991 1207 1220 2518 3558 2168 4166 4214 4602 4603 883 MS 21-1 alignment trimmed tree collapsed 0.584 1.054
3543 177 Putative ribokinase 2156 35 101-1 alignment trimmed tree collapsed 0.005 0.297
3544 177 Putative cytoplasmic protein 2155 44 55989 alignment trimmed tree collapsed 0.004 0.810
3545 177 Putative inner membrane protein 2154 39 55989 alignment trimmed tree collapsed 0.000 0.459
3546 177 Putative inner membrane protein 2154 43 H736 alignment trimmed tree collapsed 0.023 0.973
3547 177 Puative phophotriesterase 1947 1485 2153 149 APEC O1 alignment trimmed tree collapsed 0.003 1.592
3548 177 Gamma-glutamyltranspeptidase (EC 2.3.2.2) 2029 1908 2152 188 MS 78-1 alignment trimmed tree collapsed 0.137 1.405
3549 177 Gamma-glutamyltranspeptidase (EC 2.3.2.2), fragment 2029 1908 2151 166 MS 116-1 alignment trimmed tree collapsed 0.114 2.192
3550 177 Transposase 3447 18 1827-70 alignment trimmed tree collapsed 0.008 0.558
3551 177 FIG00638721: hypothetical protein 716 717 2268 2269 3552 179 53638 alignment trimmed tree collapsed 2.390 1.074
3552 177 FIG00639161: hypothetical protein 716 717 2269 3551 148 1827-70 alignment trimmed tree collapsed 0.203 1.162
3553 177 Intergenic-region protein 24 718 155 55989 alignment trimmed tree collapsed 1.347 0.721
3554 177 FIG00641505: hypothetical protein 116 27 M718 alignment trimmed tree collapsed 0.000 0.547
3555 177 FIG00638000: hypothetical protein 76 86 721 2275 1290 4262 294 53638 alignment trimmed tree collapsed 0.061 0.635
3556 177 FIG00638808: hypothetical protein 722 2026 4164 111 H299 alignment trimmed tree collapsed 0.142 0.413
3557 177 FIG00641632: hypothetical protein 5 H299 alignment trimmed tree collapsed 0.027 1.225
3558 177 Transposase 116 207 680 981 983 991 1220 2518 4166 4214 4602 4603 756 55989 alignment trimmed tree collapsed 0.249 0.065
3559 177 Transposase 116 713 4166 406 55989 alignment trimmed tree collapsed 0.142 0.191
3560 177 hypothetical protein 115 209 681 714 2516 4167 4487 4544 4627 725 1827-70 alignment trimmed tree collapsed 0.611 0.352
3561 177 FIG00639462: hypothetical protein 40 E22 alignment trimmed tree collapsed 0.116 0.507
3562 177 NgrB 2280 34 55989 alignment trimmed tree collapsed 0.127 1.884
3563 177 NgrB 16 2281 4035 239 042 alignment trimmed tree collapsed 1.221 0.540
3564 177 probable vimentin yjdA 2 O103:H2 str. 12009 alignment trimmed
3565 177 probable vimentin yjdA 1153 3752 203 55989 alignment trimmed tree collapsed 1.715 1.394
3566 177 Methyl-accepting chemotaxis protein 1154 709 3751 237 O157:H7 str. EC4401 alignment trimmed tree collapsed 1.676 1.472
3567 177 Ferredoxin reductase 110 MS 175-1 alignment trimmed tree collapsed 0.030 0.531
3568 177 Ferredoxin reductase 294 117 O157:H7 str. EC869 alignment trimmed tree collapsed 0.062 0.813
3569 177 FIG00639173: hypothetical protein 60 H299 alignment trimmed tree collapsed 0.028 0.115
3570 177 FIG00639949: hypothetical protein 90 66 E22 alignment trimmed tree collapsed 0.015 0.150
3571 177 FIG00641021: hypothetical protein 2553 27 O111:H- str. 11128 alignment trimmed tree collapsed 0.023 0.218
3572 177 hypothetical protein 42 53638 alignment trimmed tree collapsed 0.705 0.663
3573 177 hypothetical protein 19 130 2286 256 330 O26:H11 str. 11368 alignment trimmed tree collapsed 0.515 0.633
3574 177 Antirestriction protein klcA 21 1191 2287 238 ED1a alignment trimmed tree collapsed 0.122 0.296
3575 177 COG2003: DNA repair proteins 22 1190 259 O26:H11 str. 11368 alignment trimmed tree collapsed 0.020 0.387
3576 177 YeeT 23 1189 2289 284 CFT073 alignment trimmed tree collapsed 0.044 0.381
3577 177 YeeU protein (antitoxin to YeeV) 215 288 E22 alignment trimmed tree collapsed 0.013 0.510
3578 177 YeeV toxin protein 1187 2291 255 042 alignment trimmed tree collapsed 0.000 0.382
3579 177 YeeU protein (antitoxin to YeeV) 211 1186 2292 191 4880 4937 308 MS 200-1 alignment trimmed tree collapsed 0.580 0.033
3580 177 conserved domain protein 212 1185 2292 190 209 55989 alignment trimmed tree collapsed 0.027 0.709
3581 177 Propanediol utilization protein PduV, truncated fragment 4809 46 OP50 alignment trimmed tree collapsed 0.078 0.693
3582 177 UPF0265 protein YeeX 4810 134 B7A alignment trimmed tree collapsed 0.000 0.087
3583 177 Putative inner membrane protein 128 B str. REL606 alignment trimmed tree collapsed 0.010 0.150
3584 177 DNA gyrase inhibitory protein 1279 134 O111:H- str. 11128 alignment trimmed tree collapsed 0.027 1.002
3585 177 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) 4683 5327 1280 3768 4711 335 55989 alignment trimmed tree collapsed 0.958 1.705
3586 177 Exodeoxyribonuclease I (EC 3.1.11.1) 1281 131 55989 alignment trimmed tree collapsed 0.012 0.663
3587 177 hypothetical protein 3461 636 1282 232 H299 alignment trimmed tree collapsed 0.000 1.074
3588 177 Putative transport system permease protein 1283 99 MS 107-1 alignment trimmed tree collapsed 0.016 1.311
3589 177 Putrescine importer 1939 4058 1250 1284 3280 288 E2348/69 alignment trimmed tree collapsed 0.551 0.643
3590 177 Hypothetical transcriptional regulator yeeY 5465 1285 3951 355 SE15 alignment trimmed tree collapsed 1.905 0.744
3591 177 Nucleoside-diphosphate-sugar epimerases 132 MS 145-7 alignment trimmed tree collapsed 0.011 0.588
3592 177 YoeB toxin protein 2315 83 O111:H- str. 11128 alignment trimmed tree collapsed 0.000 0.584
3593 177 YefM protein (antitoxin to YoeB) 83 E2348/69 alignment trimmed tree collapsed 0.000 0.157
3594 177 ATP phosphoribosyltransferase (EC 2.4.2.17) 431 134 ATCC 8739 alignment trimmed tree collapsed 0.004 0.511
3595 177 Histidinol dehydrogenase (EC 1.1.1.23) 432 132 55989 alignment trimmed tree collapsed 0.026 0.053
3596 177 Histidinol-phosphate aminotransferase (EC 2.6.1.9) 433 135 O157:H7 str. EC4501 alignment trimmed tree collapsed 0.006 0.141
3597 177 Histidinol-phosphatase (EC 3.1.3.15) / Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) 434 132 E24377A alignment trimmed tree collapsed 0.015 0.193
3598 177 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) 435 134 B185 alignment trimmed tree collapsed 0.007 0.324
3599 177 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (EC 5.3.1.16) 436 135 55989 alignment trimmed tree collapsed 0.013 0.073
3600 177 Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-) 437 134 H591 alignment trimmed tree collapsed 0.005 0.176
3601 177 Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) 438 133 IAI39 alignment trimmed tree collapsed 0.016 0.454
3602 177 regulator of length of O-antigen component of lipopolysaccharide chains 1405 5278 1105 1814 375 E24377A alignment trimmed tree collapsed 2.180 1.324
3603 177 UDP-glucose dehydrogenase (EC 1.1.1.22) 3487 87 MS 69-1 alignment trimmed tree collapsed 0.312 0.549
3604 177 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) 3488 132 536 alignment trimmed tree collapsed 0.003 0.620
3605 177 Glycosyltransferase (EC 2.4.1.-) 16 55989 alignment trimmed tree collapsed 1.431 0.019
3606 177 FIG00641555: hypothetical protein 3 55989 alignment trimmed tree collapsed 0.004 1.414
3607 178 Phage replication protein 133 B7A alignment trimmed tree collapsed 0.013 0.921
3608 178 Phage replication protein 2442 54 O26:H11 str. 11368 alignment trimmed tree collapsed 0.036 0.027
3609 178 Putative stability/partitioning protein encoded within prophage CP-933T 181 2441 2971 118 IHE3034 alignment trimmed tree collapsed 0.959 0.831
3610 178 FIG00640112: hypothetical protein 2440 29 55989 alignment trimmed tree collapsed 1.018 1.513
3611 178 FIG00638444: hypothetical protein 2439 21 55989 alignment trimmed tree collapsed 0.656 0.030
3612 178 hypothetical protein 2438 38 55989 alignment trimmed tree collapsed 0.046 2.883
3613 178 FIG00640306: hypothetical protein 2437 26 2362-75 alignment trimmed tree collapsed 0.070 0.508
3614 178 Phage-related capsid packaging protein 2436 104 B7A alignment trimmed tree collapsed 1.085 1.416
3615 178 Phage terminase, ATPase subunit 2435 109 UTI89 alignment trimmed tree collapsed 0.002 0.675
3616 178 Phage terminase, ATPase subunit 1
3617 178 Capsid scaffolding protein 2434 114 101-1 alignment trimmed tree collapsed 0.929 0.045
3618 178 Capsid scaffolding protein 2434 106 O127:H6 str. E2348/69 alignment trimmed tree collapsed 2.094 1.260
3619 178 Phage major capsid protein 2433 103 O26:H11 str. 11368 alignment trimmed tree collapsed 0.062 1.170
3620 178 Small terminase subunit 2432 61 ETEC H10407 alignment trimmed tree collapsed 0.011 0.556
3621 178 Head completion/stabilization protein 2431 41 B171 alignment trimmed tree collapsed 0.031 0.409
3622 178 Tail component protein 2430 102 B7A alignment trimmed tree collapsed 1.038 0.887
3623 178 COG1263: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 2429 29 SE11 alignment trimmed tree collapsed 0.000 0.466
3624 178 Endolysin (EC 3.2.1.-) 2428 49 O26:H11 str. 11368 alignment trimmed tree collapsed 0.035 0.183
3625 178 FIG00639289: hypothetical protein 2427 35 E22 alignment trimmed tree collapsed 0.028 0.576
3626 178 FIG00642636: hypothetical protein 2426 11 O26:H11 str. 11368 alignment trimmed tree collapsed 0.575 0.618
3627 179 Starvation sensing protein RspA 992 1579 3577 3796 282 MS 78-1 alignment trimmed tree collapsed 1.730 0.841
3628 179 Protein of unknown function UPF0060 3797 127 M718 alignment trimmed tree collapsed 0.011 0.829
3629 179 putative secreted protein 130 55989 alignment trimmed tree collapsed 0.009 1.287
3630 179 Spermidine N1-acetyltransferase (EC 2.3.1.57) 2355 127 UM146 alignment trimmed tree collapsed 0.006 0.520
3631 179 Hypothetical UPF0257 lipoprotein ynfC precursor 2356 131 E110019 alignment trimmed tree collapsed 0.020 0.818
3632 179 hypothetical protein 2357 128 WV_060327 alignment trimmed tree collapsed 0.010 0.831
3633 179 Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-) 3289 3634 3965 4742 325 553 773 2358 2359 619 SE11 alignment trimmed tree collapsed 0.462 0.773
3634 179 Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-) 3289 3633 3965 4742 325 553 773 2358 2359 570 B171 alignment trimmed tree collapsed 1.839 0.768
3635 179 Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.99.-) 1118 4743 772 2295 413 S88 alignment trimmed tree collapsed 0.000 0.776
3636 179 Anaerobic dimethyl sulfoxide reductase chain C (EC 1.8.99.-) 4744 771 3521 256 APEC O1 alignment trimmed tree collapsed 0.030 0.011
3637 179 Putative oxidoreductase component of anaerobic dehydrogenases; Functional role page for Chaperone protein TorD 4345 2491 3522 258 B7A alignment trimmed tree collapsed 0.032 0.103
3638 179 Voltage-gated ClC-type chloride channel ClcB 3523 128 E24377A alignment trimmed tree collapsed 0.011 0.788
3639 179 Dethiobiotin synthetase (EC 6.3.3.3) 4884 934 3524 250 MS 124-1 alignment trimmed tree collapsed 0.819 0.764
3640 179 Mlc, transcriptional repressor of MalT (the transcriptional activator of maltose regulon) and manXYZ operon 3525 4019 259 O157:H7 str. TW14588 alignment trimmed tree collapsed 1.087 0.861
3641 179 LysR family transcriptional regulator YnfL 2153 2736 2817 2965 3008 3715 4278 5351 618 965 1861 2190 2605 2646 2876 3526 3962 4133 4889 1429 55989 alignment trimmed tree collapsed 3.111 1.213
3642 179 Permeases of the major facilitator superfamily 1
3643 179 Permeases of the major facilitator superfamily 3527 130 55989 alignment trimmed tree collapsed 0.007 1.754
3644 179 Acid shock protein 1 precursor 3528 45 E22 alignment trimmed tree collapsed 0.010 0.524
3645 179 Putative protease ydgD (EC 3.4.21.-) 3529 126 55989 alignment trimmed tree collapsed 0.012 2.453
3646 179 Spermidine export protein mdtI 848 3465 3647 2678 3530 3531 4233 549 TA280 alignment trimmed tree collapsed 1.634 0.310
3647 179 Spermidine export protein mdtJ 848 3465 2678 3531 4233 422 536 alignment trimmed tree collapsed 1.706 0.224
3648 179 Putative transport protein 2059 2912 1879 3532 3918 389 55989 alignment trimmed tree collapsed 2.106 0.327
3649 179 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) 3533 132 MS 116-1 alignment trimmed tree collapsed 0.000 0.162
3650 179 NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2) 3534 125 MS 182-1 alignment trimmed tree collapsed 0.000 0.956
3651 179 Protein ydgH precursor 3535 132 CFT073 alignment trimmed tree collapsed 0.007 0.391
3652 179 Arginine/ornithine antiporter ArcD 5037 2005 3536 253 CFT073 alignment trimmed tree collapsed 1.254 0.482
3653 179 FolM Alternative dihydrofolate reductase 1 953 972 2422 1200 1489 1793 3537 463 O111:H- str. 11128 alignment trimmed tree collapsed 2.477 0.812
3654 179 Putative inner membrane protein 3538 132 1125A alignment trimmed tree collapsed 0.000 0.484
3655 179 Transcriptional regulatory protein RstA 817 820 1159 1980 2084 2102 3161 3503 4458 5040 5082 5259 265 467 1455 1706 1775 2034 2037 2248 2332 2397 3432 3539 3583 3748 1666 IAI1 alignment trimmed tree collapsed 2.197 0.936
3656 179 Sensory histidine kinase in two-component regulatory system with RstA 1
3657 179 Sensory histidine kinase in two-component regulatory system with RstA 818 1033 1279 1328 1797 1979 2103 2368 2677 2785 3160 3305 4457 4601 5041 5083 5258 266 466 567 660 881 1158 1456 1707 1776 2035 2249 2333 2393 3310 3431 3453 3540 3826 2408 E22 alignment trimmed tree collapsed 2.587 0.506
3658 179 DNA replication terminus site-binding protein 3541 129 55989 alignment trimmed tree collapsed 0.026 1.261
3659 179 Fumarate hydratase class II (EC 4.2.1.2) 837 3473 3542 267 HS alignment trimmed tree collapsed 1.734 0.464
3660 179 Fumarate hydratase class II (EC 4.2.1.2) 837 3473 3542 275 W alignment trimmed tree collapsed 1.100 0.087
3661 179 Fumarate hydratase class I, aerobic (EC 4.2.1.2) 1168 3543 3970 304 55989 alignment trimmed tree collapsed 0.105 0.394
3662 179 Mannose-6-phosphate isomerase (EC 5.3.1.8) 3544 130 EC4100B alignment trimmed tree collapsed 0.013 0.645
3663 179 Putative GTP-binding protein YdgA 1268 2157 3545 261 O111:H- str. 11128 alignment trimmed tree collapsed 0.013 1.152
3664 179 Glucuronide transport facilitator UidC 3546 101 E24377A alignment trimmed tree collapsed 0.010 0.430
3665 179 Glucuronide transporter UidB 1538 3547 4660 467 B354 alignment trimmed tree collapsed 1.534 0.196
3666 179 Beta-glucuronidase (EC 3.2.1.31) 3548 107 B171 alignment trimmed tree collapsed 0.006 0.697
3667 179 Transcriptional repressor UidR 3549 128 E24377A alignment trimmed tree collapsed 0.006 0.674
3668 179 7-alpha-hydroxysteroid dehydrogenase (EC 1.1.1.159) 953 972 2348 2422 2567 2654 2739 2841 3212 3653 4050 5287 82 412 1200 1313 1489 1793 2014 2956 3537 4463 4594 4678 1909 TA271 alignment trimmed tree collapsed 2.966 0.596
3669 179 Maltose regulon regulatory protein MalI (repressor for malXY) 970 1350 1465 2021 2577 3714 4084 5358 1198 1436 1745 1860 1942 2526 3940 4011 4361 1033 MS 182-1 alignment trimmed tree collapsed 2.573 0.815
3670 179 PTS system, maltose and glucose-specific IIC component (EC 2.7.1.69) / PTS system, maltose and glucose-specific IIB component (EC 2.7.1.69) 4426 5026 691 1305 3722 3941 4023 518 H591 alignment trimmed tree collapsed 0.003 0.019
3671 179 Cystathionine beta-lyase (EC 4.4.1.8) (CBL) (Beta-cystathionase) (Cysteine lyase) / Maltose regulon modulator 3942 144 55989 alignment trimmed tree collapsed 0.059 0.193
3672 179 Cystathionine beta-lyase (EC 4.4.1.8) (CBL) (Beta-cystathionase) (Cysteine lyase) / Maltose regulon modulator 3942 190 55989 alignment trimmed tree collapsed 2.176 0.615
3673 179 Adenosine deaminase (EC 3.5.4.4) 3943 129 53638 alignment trimmed tree collapsed 0.000 0.739
3674 179 Uncharacterized oxidoreductase ydgJ (EC 1.-.-.-) 2024 48 3944 260 MS 119-7 alignment trimmed tree collapsed 1.314 0.794
3675 179 Cnu protein 524 2273 5154 1081 1411 3945 322 M605 alignment trimmed tree collapsed 1.097 0.138
3676 179 Putative inner membrane protein 3946 133 B7A alignment trimmed tree collapsed 0.007 0.176
3677 179 Electron transport complex protein RnfA 3947 133 HS alignment trimmed tree collapsed 0.000 0.201
3678 179 Electron transport complex protein RnfB 3948 132 B7A alignment trimmed tree collapsed 0.000 0.770
3679 179 Electron transport complex protein RnfC 97 O157:H7 str. EC4045 alignment trimmed tree collapsed 0.022 0.085
3680 179 Electron transport complex protein RnfD 4698 130 H736 alignment trimmed tree collapsed 0.001 0.059
3681 179 Electron transport complex protein RnfD 4698 132 OP50 alignment trimmed tree collapsed 0.021 0.537
3682 179 Electron transport complex protein RnfG 4697 129 55989 alignment trimmed tree collapsed 0.006 0.256
3683 179 Electron transport complex protein RnfE 4696 132 O157:H7 str. Sakai alignment trimmed tree collapsed 0.000 0.804
3684 179 Endonuclease III (EC 4.2.99.18) 4695 132 O103:H2 str. 12009 alignment trimmed tree collapsed 0.000 0.640
3685 179 Di/tripeptide permease DtpA 2121 4125 4693 250 55989 alignment trimmed tree collapsed 0.773 1.473
3686 179 Glutathione S-transferase (EC 2.5.1.18) 3383 4198 1821 3102 4692 324 O103:H2 str. 12009 alignment trimmed tree collapsed 0.000 0.388
3687 179 Pyridoxal kinase (EC 2.7.1.35) 4691 133 MS 182-1 alignment trimmed tree collapsed 0.000 0.128
3688 179 Tyrosyl-tRNA synthetase (EC 6.1.1.1) ## cluster 1 4690 122 S88 alignment trimmed tree collapsed 0.003 0.614
3689 179 Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5) 128 MS 145-7 alignment trimmed tree collapsed 0.006 0.027
3690 179 Membrane-bound lysozyme inhibitor of c-type lysozyme 4637 131 B088 alignment trimmed tree collapsed 0.000 0.359
3691 179 Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-) 4638 132 W alignment trimmed tree collapsed 0.009 0.745
3692 179 Outer membrane lipoprotein pcp precursor 2927 1650 4639 258 EC4100B alignment trimmed tree collapsed 1.296 0.619
3693 179 Transcriptional regulator SlyA 4640 133 IAI1 alignment trimmed tree collapsed 0.000 0.411
3694 179 Transcriptional regulator SlyA 4640 133 TA280 alignment trimmed tree collapsed 0.000 0.407
3695 179 hypothetical protein 4641 127 M605 alignment trimmed tree collapsed 0.000 0.548
3696 179 Putative membrane protein 1825 2364 4642 363 E22 alignment trimmed tree collapsed 1.726 1.017
3697 179 hypothetical protein 4643 123 SE11 alignment trimmed tree collapsed 0.011 0.150
3698 179 hypothetical protein 4644 2 alignment trimmed
3699 179 Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) 4645 132 E24377A alignment trimmed tree collapsed 0.000 0.011
3700 179 Putative aldo/keto reductase 5557 4341 4646 294 55989 alignment trimmed tree collapsed 1.802 0.483
3701 179 hypothetical protein 4647 92 B str. REL606 alignment trimmed tree collapsed 0.000 0.523
3702 179 Transcriptional regulator, TetR family 685 4648 4870 136 55989 alignment trimmed tree collapsed 0.005 0.282
3703 179 N-ethylmaleimide reductase (EC 1.-.-.-) 4649 190 MS 182-1 alignment trimmed tree collapsed 0.009 0.701
3704 179 Lactoylglutathione lyase (EC 4.4.1.5) 4650 131 O157:H7 alignment trimmed tree collapsed 0.000 0.577
3705 179 Ribonuclease T (EC 3.1.13.-) 4651 132 W alignment trimmed tree collapsed 0.000 0.470
3706 179 Probable ATP-dependent helicase lhr (EC 3.6.1.-) 1
3707 179 Probable ATP-dependent helicase lhr (EC 3.6.1.-) 1
3708 179 Probable ATP-dependent helicase lhr (EC 3.6.1.-) 99 E22 alignment trimmed tree collapsed 0.003 0.436
3709 179 Probable monothiol glutaredoxin GrlA 131 TA143 alignment trimmed tree collapsed 0.000 0.088
3710 179 FIG00639069: hypothetical protein 1866 37 55989 alignment trimmed tree collapsed 0.040 2.618
3711 179 Putative lipoprotein 1865 157 HS alignment trimmed tree collapsed 0.000 0.493
3712 179 Superoxide dismutase [Fe] (EC 1.15.1.1) 1325 1162 1864 263 1212A alignment trimmed tree collapsed 0.961 0.888
3713 179 Putative transport protein 5079 470 1863 2873 413 55989 alignment trimmed tree collapsed 1.939 0.766
3714 179 Purine nucleotide synthesis repressor 970 1465 2021 2229 2734 3225 3669 4084 5640 499 963 1198 1436 1745 1770 1860 2526 3940 4455 1267 1125A alignment trimmed tree collapsed 2.411 1.152
3715 179 Hypothetical lysR-family transcriptional regulator YdhB 1861 262 MS 182-1 alignment trimmed tree collapsed 0.000 0.932
3716 179 Putative transport protein 4384 1634 1862 245 FVEC1412 alignment trimmed tree collapsed 0.015 0.863
3717 179 Putative transport protein 1862 131 UTI89 alignment trimmed tree collapsed 0.006 0.478
3718 179 Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79) 1940 127 E22 alignment trimmed tree collapsed 0.000 0.908
3719 179 Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79) 1940 131 TA206 alignment trimmed tree collapsed 0.000 0.352
3720 179 Riboflavin synthase alpha chain (EC 2.5.1.9) 1939 124 UTI89 alignment trimmed tree collapsed 0.000 0.596
3721 179 Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps 615 1938 231 M605 alignment trimmed tree collapsed 0.000 0.892
3722 179 Possible enzyme 1937 126 MS 145-7 alignment trimmed tree collapsed 0.036 0.920
3723 179 Protein ydhR precursor 1936 129 str. K-12 substr. MG1655 alignment trimmed tree collapsed 0.000 0.766
3724 179 Acyl-CoA dehydrogenases 1935 122 55989 alignment trimmed tree collapsed 0.000 0.688
3725 179 hypothetical protein 1934 129 H591 alignment trimmed tree collapsed 0.000 0.553
3726 179 Hypothetical reductase 1933 130 55989 alignment trimmed tree collapsed 0.038 0.064
3727 179 NrfC-like protein 1118 1932 2295 266 53638 alignment trimmed tree collapsed 0.943 0.143
3728 179 hypothetical protein 1931 131 042 alignment trimmed tree collapsed 0.029 0.327
3729 179 hypothetical protein 1930 116 ATCC 8739 alignment trimmed tree collapsed 0.005 0.402
3730 179 putative oxidoreductase, Fe-S subunit 1929 128 W alignment trimmed tree collapsed 0.000 0.578
3731 179 hypothetical protein 75 O55:H7 str. CB9615 alignment trimmed tree collapsed 0.023 0.903
3732 179 hypothetical protein 3888 133 APEC O1 alignment trimmed tree collapsed 0.000 0.131
3733 179 Pyruvate kinase (EC 2.7.1.40) 3942 1968 3887 249 MS 145-7 alignment trimmed tree collapsed 1.132 1.000
3734 179 major outer membrane lipoprotein 2359 2240 3886 247 55989 alignment trimmed tree collapsed 0.835 0.466
3735 179 L,D-transpeptidase YnhG 3885 126 MS 84-1 alignment trimmed tree collapsed 0.007 1.116
3736 179 Sulfur acceptor protein SufE for iron-sulfur cluster assembly 2708 3800 3884 261 MS 115-1 alignment trimmed tree collapsed 1.492 0.426
3737 179 Cysteine desulfurase (EC 2.8.1.7), SufS subfamily; Selenocysteine lyase( EC:4.4.1.16 ) subunit 2707 3801 3883 219 B185 alignment trimmed tree collapsed 1.085 0.851
3738 179 Iron-sulfur cluster assembly protein SufD 3882 129 W alignment trimmed tree collapsed 0.003 1.002
3739 179 Iron-sulfur cluster assembly ATPase protein SufC 809 1787 1919 2038 2183 2184 3448 3512 4230 4231 4453 4566 4567 4672 4765 4902 4919 5142 623 872 917 1401 1710 1834 1899 2073 2564 2697 2698 2929 3291 3358 3383 3384 3654 3655 3778 3881 4504 2763 E110019 alignment trimmed tree collapsed 2.943 1.770
3740 179 Iron-sulfur cluster assembly protein SufB 3880 125 E24377A alignment trimmed tree collapsed 0.000 0.122
3741 179 Iron binding protein SufA for iron-sulfur cluster assembly 2956 5723 2087 2596 3879 380 55989 alignment trimmed tree collapsed 0.027 0.288
3742 179 hypothetical protein 3561 132 E22 alignment trimmed tree collapsed 0.000 0.218
3743 179 FIG002649: ydiI hotdog fold superfamily 5288 411 3560 266 E110019 alignment trimmed tree collapsed 0.606 0.197
3744 179 Fe-S protein, homolog of lactate dehydrogenase SO1521 3559 127 O111:H- str. 11128 alignment trimmed tree collapsed 0.010 0.845
3745 179 Putative membrane protein 2 1827-70 alignment trimmed
3746 179 Putative membrane protein 3558 130 FVEC1412 alignment trimmed tree collapsed 0.000 0.836
3747 179 hypothetical protein 3557 127 str. K-12 substr. DH10B alignment trimmed tree collapsed 0.000 0.155
3748 179 Putative transport system permease protein 3749 3555 3556 256 55989 alignment trimmed tree collapsed 1.244 1.555
3749 179 putative amino acid/amine transport protein 3555 132 O157:H7 str. EC4115 alignment trimmed tree collapsed 0.007 0.091
3750 179 Shikimate/quinate 5-dehydrogenase I beta (EC 1.1.1.282) 1861 1064 3554 265 O26:H11 str. 11368 alignment trimmed tree collapsed 1.641 0.072
3751 179 3-dehydroquinate dehydratase I (EC 4.2.1.10) 3553 130 55989 alignment trimmed tree collapsed 0.008 0.000
3752 179 Acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit (EC 2.8.3.8) 3552 202 IAI1 alignment trimmed tree collapsed 0.008 0.740
3753 179 Acyl-CoA dehydrogenase (EC 1.3.99.3) 5597 1590 263 HS alignment trimmed tree collapsed 0.000 0.876
3754 179 Acyl-CoA dehydrogenase (EC 1.3.99.3) 5597 1590 276 HS alignment trimmed tree collapsed 0.994 0.159
3755 179 Transcriptional regulator, AraC family 2473 129 55989 alignment trimmed tree collapsed 0.010 0.141
3756 179 FIG00638426: hypothetical protein 104 UTI89 alignment trimmed tree collapsed 0.000 0.220
3757 179 Electron transfer flavoprotein, beta subunit 5599 1588 2472 259 55989 alignment trimmed tree collapsed 0.659 0.202
3758 179 Electron transfer flavoprotein, alpha subunit 5600 1587 2471 246 55989 alignment trimmed tree collapsed 0.013 0.839
3759 179 Probable electron transfer flavoprotein-quinone oxidoreductase FixC (EC 1.5.5.-) 2647 5601 1586 2470 4587 384 E110019 alignment trimmed tree collapsed 0.610 0.726
3760 179 Ferredoxin-like protein FixX 5602 1585 2469 263 MS 107-1 alignment trimmed tree collapsed 0.000 0.294
3761 179 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) 5285 5595 414 2468 372 B088 alignment trimmed tree collapsed 1.826 0.730
3762 179 Phosphoenolpyruvate synthase (EC 2.7.9.2) 2467 128 TA271 alignment trimmed tree collapsed 0.003 1.013
3763 179 FIG00641027: hypothetical protein 48 WV_060327 alignment trimmed tree collapsed 0.023 0.186
3764 179 FIG137360: hypothetical protein 2466 132 B7A alignment trimmed tree collapsed 0.000 0.183
3765 179 FIG137360: hypothetical protein 2466 133 SMS-3-5 alignment trimmed tree collapsed 0.000 0.269
3766 179 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) 3027 4964 2465 2717 4094 379 55989 alignment trimmed tree collapsed 0.729 0.149
3767 179 Hemin uptake protein HemP 2464 130 O157:H7 str. EC508 alignment trimmed tree collapsed 0.015 0.250
3768 179 Selenoprotein O and cysteine-containing homologs 2463 129 55989 alignment trimmed tree collapsed 0.028 0.023
3769 179 FIG00638687: hypothetical protein 353 2462 192 IAI1 alignment trimmed tree collapsed 2.496 0.766
3770 179 Probable lipoprotein nlpC precursor 2461 128 CFT073 alignment trimmed tree collapsed 0.013 0.850
3771 179 Vitamin B12 ABC transporter, ATPase component BtuD 1787 2037 3949 4566 5279 5555 5718 872 1815 1900 2082 2460 2977 3383 4790 1125 53638 alignment trimmed tree collapsed 3.223 0.499
3772 179 Glutathione peroxidase (EC 1.11.1.9) 2459 131 MS 124-1 alignment trimmed tree collapsed 0.017 0.478
3773 179 Vitamin B12 ABC transporter, permease component BtuC 5720 2084 2458 259 55989 alignment trimmed tree collapsed 0.007 0.522
3774 179 Integration host factor alpha subunit 1029 4763 5131 843 1391 1615 3457 529 str. K-12 substr. MG1655 alignment trimmed tree collapsed 1.541 1.337
3775 179 Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) 844 131 ETEC H10407 alignment trimmed tree collapsed 0.007 1.243
3776 179 Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20) 845 130 O55:H7 str. CB9615 alignment trimmed tree collapsed 0.001 0.165
3777 179 hypothetical protein 1
3778 179 LSU ribosomal protein L20p 846 131 M605 alignment trimmed tree 0.000 0.000
3779 179 LSU ribosomal protein L35p 847 130 042 alignment trimmed tree collapsed 0.000 0.125
3780 179 Translation initiation factor 3 848 136 K12 alignment trimmed tree 0.000 0.000
3781 179 Threonyl-tRNA synthetase (EC 6.1.1.3) 849 128 ATCC 8739 alignment trimmed tree collapsed 0.004 1.553
3782 179 hypothetical protein 850 74 E22 alignment trimmed tree collapsed 0.000 0.541
3783 179 hypothetical protein 850 127 55989 alignment trimmed tree collapsed 0.057 0.711
3784 179 hypothetical protein 851 114 MS 21-1 alignment trimmed tree collapsed 0.000 0.326
3785 179 Putative outer membrane protein 852 133 TA271 alignment trimmed tree collapsed 0.000 0.584
3786 179 6-phosphofructokinase class II (EC 2.7.1.11) 674 2203 853 4435 4619 266 O26:H11 str. 11368 alignment trimmed tree collapsed 0.007 0.542
3787 179 hypothetical protein 854 132 MS 119-7 alignment trimmed tree collapsed 0.000 0.559
3788 179 Fructosamine kinase family protein, At3g61080 homolog 2 TA206 alignment trimmed
3789 179 Putative membrane protein 856 127 SE15 alignment trimmed tree collapsed 0.012 0.891
3790 179 2-deoxyglucose-6-phosphate hydrolase YniC 1601 3372 341 857 1785 442 O157:H7 str. EC4115 alignment trimmed tree collapsed 0.000 0.159
3791 179 Membrane-bound metal-dependent hydrolase YdjM, induced during SOS response 858 131 O157:H7 str. TW14588 alignment trimmed tree collapsed 0.005 0.592
3792 179 L-cystine uptake protein TcyP 859 138 B354 alignment trimmed tree collapsed 0.000 0.209
3793 179 hypothetical protein 860 72 str. K-12 substr. DH10B alignment trimmed tree collapsed 0.027 0.260
3794 179 hypothetical protein 85 MS 84-1 alignment trimmed tree collapsed 0.116 1.792
3795 179 Cell division activator cedA 1218 130 O157:H7 str. EC4401 alignment trimmed tree collapsed 0.000 0.597
3796 179 Catalase (EC 1.11.1.6) 1219 127 55989 alignment trimmed tree collapsed 0.008 0.656
3797 179 Cellobiose phosphotransferase system YdjC-like protein 1220 133 55989 alignment trimmed tree collapsed 0.032 0.237
3798 179 Chitobiose-specific 6-phospho-beta-glucosidase ChbF (EC 3.2.1.86) 1165 1221 3967 320 B7A alignment trimmed tree collapsed 0.017 0.688
3799 179 Chitobiose-specific regulator ChbR, AraC family 1222 129 E110019 alignment trimmed tree collapsed 0.000 0.791
3800 179 PTS system, chitobiose-specific IIA component (EC 2.7.1.69) 4289 1223 2866 193 55989 alignment trimmed tree collapsed 0.009 0.626
3801 179 PTS system, chitobiose-specific IIC component (EC 2.7.1.69) 4290 1224 2865 174 MS 182-1 alignment trimmed tree collapsed 0.003 0.657
3802 179 PTS system, chitobiose-specific IIB component (EC 2.7.1.69) 4291 1225 2864 184 ATCC 8739 alignment trimmed tree collapsed 0.000 0.659
3803 179 Osmotically inducible lipoprotein E precursor 1226 133 K12 alignment trimmed tree collapsed 0.000 0.605
3804 179 NAD synthetase (EC 6.3.1.5) 1227 133 IAI39 alignment trimmed tree collapsed 0.015 1.798
3805 179 Excinuclease cho (excinuclease ABC alternative C subunit) 1228 130 IAI1 alignment trimmed tree collapsed 0.056 0.866
3806 179 hypothetical protein 1229 126 55989 alignment trimmed tree collapsed 0.038 0.285
3807 179 Periplasmic protein related to spheroblast formation 1330 1156 1230 261 SMS-3-5 alignment trimmed tree collapsed 0.012 0.418
3808 179 Succinylglutamate desuccinylase (EC 3.5.1.96) 1231 131 55989 alignment trimmed tree collapsed 0.004 0.041
3809 179 Succinylarginine dihydrolase (EC 3.5.3.23) 1232 132 E22 alignment trimmed tree collapsed 0.021 0.486
3810 179 Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) 1233 125 55989 alignment trimmed tree collapsed 0.054 1.164
3811 179 Arginine N-succinyltransferase (EC 2.3.1.109) 1234 130 55989 alignment trimmed tree collapsed 0.015 2.134
3812 179 Arginine N-succinyltransferase (EC 2.3.1.109) 1
3813 179 Succinylornithine transaminase (EC 2.6.1.81) 1927 3070 383 1235 1238 489 ETEC H10407 alignment trimmed tree collapsed 0.028 0.282
3814 179 Succinylornithine transaminase (EC 2.6.1.81) 1
3815 179 hypothetical protein 318 110 MS 84-1 alignment trimmed tree collapsed 0.000 0.175
3816 179 Exodeoxyribonuclease III (EC 3.1.11.2) 317 132 TA271 alignment trimmed tree collapsed 0.004 0.694
3817 179 DedA family inner membrane protein YdjX 316 129 F11 alignment trimmed tree collapsed 0.032 0.192
3818 179 Hypothetical protein YdjY 315 121 B185 alignment trimmed tree collapsed 0.014 0.862
3819 179 DedA family inner membrane protein YdjZ 314 138 55989 alignment trimmed tree collapsed 0.009 0.263
3820 179 Hypothetical protein YnjA 127 IAI1 alignment trimmed tree collapsed 0.012 1.293
3821 179 ABC transporter, periplasmic substrate-binding protein YnjB 312 131 MS 21-1 alignment trimmed tree collapsed 0.038 1.451
3822 179 ABC transporter, permease protein YnjC 311 131 B171 alignment trimmed tree collapsed 0.017 0.303
3823 179 ABC transporter, ATP-binding protein YnjD 1787 2065 2183 2976 3263 3448 3949 4444 4732 4790 5189 5555 310 418 450 530 623 872 1802 1873 2977 3237 3654 4790 1533 B7A alignment trimmed tree collapsed 2.321 0.175
3824 179 Putative thiosulfate sulfurtransferase ynjE (EC 2.8.1.1) 309 127 55989 alignment trimmed tree collapsed 0.009 0.155
3825 179 Putative phosphatidylglycerophosphate synthase 308 127 O26:H11 str. 11368 alignment trimmed tree collapsed 0.011 0.418
3826 179 5-methyl-dCTP pyrophosphohydrolase (EC 3.6.1.-) 3329 5661 307 1751 4056 293 B088 alignment trimmed tree collapsed 1.854 0.518
3827 179 hypothetical protein 306 131 MS 124-1 alignment trimmed tree collapsed 0.045 0.847
3828 179 NADP-specific glutamate dehydrogenase (EC 1.4.1.4) 305 128 MS 78-1 alignment trimmed tree collapsed 0.003 1.243
3829 179 hypothetical protein 304 68 55989 alignment trimmed tree collapsed 0.012 0.321
3830 179 DNA topoisomerase III (EC 5.99.1.2) 303 139 55989 alignment trimmed tree collapsed 0.003 0.280
3831 179 Selenide,water dikinase (EC 2.7.9.3) 302 133 E24377A alignment trimmed tree collapsed 0.017 0.130
3832 179 Selenide,water dikinase (EC 2.7.9.3) 1
3833 179 Protein ydjA 301 130 O157:H7 str. FRIK966 alignment trimmed tree collapsed 0.000 0.638
3834 179 Protease IV (EC 3.4.21.-) 300 126 UMN026 alignment trimmed tree collapsed 0.008 0.279
3835 179 L-asparaginase (EC 3.5.1.1) 299 113 M718 alignment trimmed tree collapsed 0.000 0.682
3836 179 Nicotinamidase (EC 3.5.1.19) 298 129 MS 84-1 alignment trimmed tree collapsed 0.010 0.117
3837 179 Putative transport protein YdjK, MFS superfamily 3843 5603 291 297 1584 366 O127:H6 str. E2348/69 alignment trimmed tree collapsed 2.485 0.554
3838 179 Putative HTH-type transcriptional regulator YdjF 675 888 1285 1711 2003 2569 2605 2702 4045 4684 80 296 666 749 1130 2742 2961 3206 3767 3806 4389 4620 1396 BL21 alignment trimmed tree collapsed 2.483 0.745
3839 179 Hypothetical oxidoreductase YdjG (EC 1.-.-.-) 2346 2730 4143 5557 295 605 960 990 3627 4341 4833 1080 B088 alignment trimmed tree collapsed 2.267 0.873
3840 179 Uncharacterized sugar kinase YdjH 294 270 W alignment trimmed tree collapsed 0.013 0.657
3841 179 Putative aldolase YdjI 1719 293 757 337 MS 116-1 alignment trimmed tree collapsed 0.003 0.073
3842 179 Hypothetical zinc-type alcohol dehydrogenase-like protein YdjJ 1290 1494 3170 3844 5373 68 290 670 2255 2743 3067 3795 1000 E24377A alignment trimmed tree collapsed 1.963 1.041
3843 179 Putative transport protein YdjK, MFS superfamily 3837 291 297 198 53638 alignment trimmed tree collapsed 2.031 0.551
3844 179 Putative oxidoreductase YdjL 1290 1494 2973 3842 5301 5373 290 399 670 2255 2613 3067 730 W alignment trimmed tree collapsed 2.215 0.567
3845 179 Uncharacterized protein YeaC 289 133 B171 alignment trimmed tree collapsed 0.000 0.955
3846 179 Peptide methionine sulfoxide reductase MsrB (EC 1.8.4.12) 288 126 CFT073 alignment trimmed tree collapsed 0.008 0.423
3847 179 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) 2452 4155 287 3008 3617 380 KO11 alignment trimmed tree collapsed 1.196 1.396
3848 179 Aldose 1-epimerase family protein YeaD 129 E22 alignment trimmed tree collapsed 0.011 1.657
3849 179 Putative oxidoreductase YeaE, aldo/keto reductase family 2356 2237 4833 401 O157:H7 str. EC4206 alignment trimmed tree collapsed 1.905 0.955
3850 179 Putative oxidoreductase YeaE, aldo/keto reductase family 1
3851 179 MltA-interacting protein MipA 1664 2217 4832 228 83972 alignment trimmed tree collapsed 1.302 0.862
3852 179 Uncharacterized protein YeaG 4831 120 E110019 alignment trimmed tree collapsed 0.000 0.131
3853 179 UPF0229 protein YeaH 4830 132 E22 alignment trimmed tree collapsed 0.000 0.607
3854 179 Inner membrane protein YeaI 3484 4829 222 MS 200-1 alignment trimmed tree collapsed 1.341 0.732
3855 179 Inner membrane protein YeaI 1835 3031 3147 3484 3865 4047 4108 4236 4238 4274 4297 4336 5068 943 1331 1667 2374 2692 2859 2880 2959 3484 4091 4820 4829 1626 BL21 alignment trimmed tree collapsed 2.438 0.302
3856 179 Putative two-component response regulator and GGDEF family protein YeaJ 4828 128 MS 78-1 alignment trimmed tree collapsed 0.000 1.420
3857 179 Putative uncharacterized protein YeaK 4827 130 MS 145-7 alignment trimmed tree collapsed 0.018 1.332
3858 179 hypothetical protein 4826 100 ED1a alignment trimmed tree collapsed 0.000 0.793
3859 179 Putative inner membrane protein 4825 128 B171 alignment trimmed tree collapsed 0.071 6.290
3860 179 Putative inner membrane protein 4825 133 B171 alignment trimmed tree collapsed 0.000 0.464
3861 179 Transcriptional regulator, AraC family 4824 123 55989 alignment trimmed tree collapsed 0.004 0.857
3862 179 Inner membrane transport protein yeaN 4823 135 ED1a alignment trimmed tree collapsed 0.000 0.269
3863 179 FIG016027: protein of unknown function YeaO 4822 132 O157:H7 EDL933 alignment trimmed tree collapsed 0.027 0.195
3864 179 Uncharacterized protein YoaF 4821 131 O111:H- str. 11128 alignment trimmed tree collapsed 0.025 1.146
3865 179 hypothetical protein 4820 123 55989 alignment trimmed tree collapsed 0.003 0.044
3866 179 hypothetical protein 4819 28 MS 78-1 alignment trimmed tree collapsed 0.000 0.277
3867 179 Transglycosylase associated protein 4510 3987 4818 250 IAI1 alignment trimmed tree collapsed 0.453 0.922
3868 179 FIG00641670: hypothetical protein 4817 49 IAI1 alignment trimmed tree collapsed 0.002 0.982
3869 179 putative virulence protein 904 4173 170 O111:H- str. 11128 alignment trimmed tree collapsed 0.041 0.368
3870 179 hypothetical protein 136 MS 78-1 alignment trimmed tree collapsed 0.121 0.288
3871 179 FIG00643846: hypothetical protein 19 O26:H11 str. 11368 alignment trimmed tree collapsed 0.093 0.697
3872 179 Putative cytoplasmic protein 132 MS 78-1 alignment trimmed tree collapsed 0.001 0.114
3873 179 Putative cytoplasmic protein 1340 125 55989 alignment trimmed tree collapsed 0.009 0.187
3874 179 Putative transport protein 1236 1237 5482 215 811 812 1339 505 55989 alignment trimmed tree collapsed 1.886 1.444
3875 179 Positive regulator of Tartrate dehydrogenase/decarboxylase/D-malic enzyme 1827 2153 2212 4749 5493 618 766 1338 2366 4342 4442 840 55989 alignment trimmed tree collapsed 2.502 1.074
3876 179 Tartrate dehydrogenase (EC 1.1.1.93) / Tartrate decarboxylase (EC 4.1.1.73) / D-malic enzyme (EC 1.1.1.83) 5634 1556 237 ETEC H10407 alignment trimmed tree collapsed 1.398 0.558
3877 179 Choline-glycine betaine transporter 1342 75 MS 107-1 alignment trimmed tree collapsed 0.000 0.671
3878 179 Rieske (2Fe-2S) domain protein 1343 104 MS 196-1 alignment trimmed tree collapsed 0.000 0.553
3879 179 Putative dioxygenase, beta subunit (EC 1.-.-.-); Choline monooxygenase, beta subunit (EC 1.14.15.7) 4132 4719 1344 3636 3855 284 55989 alignment trimmed tree collapsed 0.022 0.332
3880 179 Ribonuclease D (EC 3.1.26.3) 1345 132 MS 115-1 alignment trimmed tree collapsed 0.000 0.920
3881 179 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) 1346 3680 134 M718 alignment trimmed tree collapsed 0.000 0.681
3882 179 Starvation lipoprotein Slp paralog 2134 1006 1347 264 O157:H7 str. EC4401 alignment trimmed tree collapsed 1.143 0.261
3883 179 Inactive homolog of metal-dependent proteases, putative molecular chaperone 1348 126 MS 78-1 alignment trimmed tree collapsed 0.026 0.580
3884 179 DinG family ATP-dependent helicase YoaA 4908 1349 4930 264 IAI39 alignment trimmed tree collapsed 1.366 1.112
3885 179 Putative translation initiation inhibitor 4619 1350 2305 257 O26:H11 str. 11368 alignment trimmed tree collapsed 1.332 0.978
3886 179 FIG00640305: hypothetical protein 1351 27 MS 187-1 alignment trimmed tree collapsed 0.000 0.592
3887 179 hypothetical protein 1352 124 B088 alignment trimmed tree collapsed 0.000 0.210
3888 179 hypothetical protein 1353 134 O157:H7 str. EC4115 alignment trimmed tree collapsed 0.000 0.197
3889 179 Para-aminobenzoate synthase, aminase component (EC 2.6.1.85) 1354 133 E22 alignment trimmed tree collapsed 0.016 0.904
3890 179 Hypothetical nudix hydrolase YeaB 1355 128 MS 107-1 alignment trimmed tree collapsed 0.000 0.609
3891 179 L-serine dehydratase 1 (EC 4.3.1.17) 1689 2693 1356 3814 3956 444 TA271 alignment trimmed tree collapsed 0.412 1.187
3892 179 Rtn protein 1357 127 O26:H11 str. 11368 alignment trimmed tree collapsed 0.013 0.904
3893 179 Rtn protein 1103 3257 4236 526 1357 2105 2692 522 O157:H7 str. EC4501 alignment trimmed tree collapsed 1.828 1.491
3894 179 Putative inner membrane protein 3142 1358 2834 261 B185 alignment trimmed tree collapsed 0.812 0.749
3895 179 PTS system, mannose-specific IIA component (EC 2.7.1.69) / PTS system, mannose-specific IIB component (EC 2.7.1.69) 1359 129 M605 alignment trimmed tree collapsed 0.000 0.518
3896 179 PTS system, mannose-specific IIC component (EC 2.7.1.69) 1360 201 O157:H7 str. EC869 alignment trimmed tree collapsed 0.000 0.765
3897 179 PTS system, mannose-specific IID component (EC 2.7.1.69) 1715 1722 753 760 1361 475 042 alignment trimmed tree collapsed 1.307 0.405
3898 179 PTS system, mannose-specific IID component (EC 2.7.1.69) 1361 127 042 alignment trimmed tree collapsed 0.000 0.127
3899 179 hypothetical protein 1362 98 CFT073 alignment trimmed tree collapsed 0.000 0.620
3900 179 Putative membrane protein 3939 128 O157:H7 alignment trimmed tree collapsed 0.000 0.216
3901 179 Ribosomal RNA large subunit methyltransferase A (EC 2.1.1.51) 3938 124 E22 alignment trimmed tree collapsed 0.023 0.553
3902 179 Cold shock protein CspC 1632 4595 4597 4727 5319 2178 3315 3316 3937 4574 4703 947 MS 198-1 alignment trimmed tree collapsed 0.867 0.631
3903 179 hypothetical protein 3936 111 ED1a alignment trimmed tree 0.000 0.000
3904 179 hypothetical protein 3935 121 H299 alignment trimmed tree collapsed 0.000 0.620
3905 179 Putative inner membrane protein 3934 125 TA280 alignment trimmed tree collapsed 0.019 0.609
3906 179 putative exported protein 3933 120 1044A alignment trimmed tree collapsed 0.000 0.495
3907 179 Transcriptional regulator KdgR, KDG operon repressor 3932 125 ATCC 8739 alignment trimmed tree collapsed 0.000 11.136
3908 179 Insertion element iso-IS1d protein insA 106 276 651 728 2110 2318 3196 3500 4477 4979 5065 5199 4747 4813 779 MS 124-1 alignment trimmed tree collapsed 0.021 0.309
3909 179 COG1662: Transposase and inactivated derivatives, IS1 family 105 655 727 2111 2317 2676 3197 4596 4640 4980 5064 433 ETEC H10407 alignment trimmed tree collapsed 0.012 0.400
3910 179 Transcriptional regulator KdgR, KDG operon repressor 1046 2951 261 55989 alignment trimmed tree collapsed 1.669 0.241
3911 179 Putative transport protein 2781 3159 267 3859 3931 406 TA206 alignment trimmed tree collapsed 0.010 0.042
3912 179 Putative transport protein 3931 134 TA271 alignment trimmed tree collapsed 0.005 0.242
3913 179 Probable protease HtpX (EC 3.4.24.-) 120 MS 78-1 alignment trimmed tree collapsed 0.000 0.506
3914 179 Tail-specific protease precursor (EC 3.4.21.102) 2265 119 O111:H- str. 11128 alignment trimmed tree collapsed 0.006 0.332
3915 179 ProQ: influences osmotic activation of compatible solute ProP 2264 128 str. K-12 substr. MG1655 alignment trimmed tree collapsed 0.005 1.209
3916 179 COG1956, GAF domain-containing protein 2263 129 O157:H7 alignment trimmed tree collapsed 0.025 0.688
3917 179 Paraquat-inducible protein A 4808 2262 4311 261 B str. REL606 alignment trimmed tree collapsed 1.815 0.873
3918 179 Paraquat-inducible protein B 4809 4310 124 O157:H7 str. EC4042 alignment trimmed tree collapsed 1.272 6.351
3919 179 Paraquat-inducible protein B 2261 129 MS 175-1 alignment trimmed tree collapsed 0.007 0.221
3920 179 Ribosomal RNA small subunit methyltransferase F (EC 2.1.1.-) 2260 134 MS 78-1 alignment trimmed tree collapsed 0.035 1.078
3921 179 Putative cytoplasmic protein YebV 2259 130 O157:H7 str. EC869 alignment trimmed tree collapsed 0.000 0.273
3922 179 Putative secreted protein YebW 265 945 2258 224 O157:H7 EDL933 alignment trimmed tree collapsed 1.320 0.866
3923 179 Serine/threonine protein phosphatase 1 (EC 3.1.3.16) 2604 2257 3207 346 E24377A alignment trimmed tree collapsed 1.178 1.061
3924 179 Putative periplasmic or exported protein 4351 134 TA280 alignment trimmed tree collapsed 0.009 0.145
3925 179 Copper resistance protein D 2085 3584 4352 144 E22 alignment trimmed tree collapsed 1.760 0.279
3926 179 Copper resistance protein D 4352 133 E22 alignment trimmed tree collapsed 0.029 0.381
3927 179 Protein yobA precursor 2087 3586 4353 140 55989 alignment trimmed tree collapsed 0.023 0.259
3928 179 DNA polymerase III theta subunit (EC 2.7.7.7) 4354 136 53638 alignment trimmed tree collapsed 0.000 0.126
3929 179 Putative amidohydrolase 4355 125 ETEC H10407 alignment trimmed tree collapsed 0.000 0.731
3930 179 Exodeoxyribonuclease X (EC 3.1.11.-) 130 042 alignment trimmed tree collapsed 0.065 8.398
3931 179 Exodeoxyribonuclease X (EC 3.1.11.-) 148 042 alignment trimmed tree collapsed 0.000 0.341
3932 179 Protease II (EC 3.4.21.83) 127 E24377A alignment trimmed tree collapsed 0.009 1.587
3933 179 FIG004088: inner membrane protein YebE 1977 130 M605 alignment trimmed tree collapsed 0.014 1.114
3934 179 Putative exported protein 1976 128 MS 119-7 alignment trimmed tree collapsed 0.000 0.367
3935 179 DNA damage-inducible gene in SOS regulon, dependent on cyclic AMP and H-NS 1975 134 TA206 alignment trimmed tree collapsed 0.000 0.252
3936 179 Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) 1974 128 E110019 alignment trimmed tree collapsed 0.003 0.683
3937 179 4-Hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) / 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) 1973 132 53638 alignment trimmed tree collapsed 0.000 0.286
3938 179 Phosphogluconate dehydratase (EC 4.2.1.12) 1972 127 E24377A alignment trimmed tree collapsed 0.000 0.612
3939 179 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) 1971 132 55989 alignment trimmed tree collapsed 0.004 1.204
3940 179 hypothetical protein 1970 114 B354 alignment trimmed tree collapsed 0.000 0.303
3941 179 Phosphogluconate repressor HexR, RpiR family 1969 160 str. K-12 substr. MG1655 alignment trimmed tree collapsed 0.007 0.508
3942 179 Pyruvate kinase (EC 2.7.1.40) 3733 1968 3887 247 042 alignment trimmed tree collapsed 0.002 0.910
3943 179 Lipid A biosynthesis (KDO) 2-(lauroyl)-lipid IVA acyltransferase (EC 2.3.1.-) 278 2974 179 KO11 alignment trimmed tree collapsed 0.379 0.595
3944 179 Lipid A biosynthesis (KDO) 2-(lauroyl)-lipid IVA acyltransferase (EC 2.3.1.-) 691 278 2974 181 F11 alignment trimmed tree collapsed 1.087 0.509
3945 179 Cell wall endopeptidase, family M23/M37 2975 133 EC4100B alignment trimmed tree collapsed 0.005 11.449
3946 179 Cell wall endopeptidase, family M23/M37 2975 117 EC4100B alignment trimmed tree collapsed 0.025 9.980
3947 179 Zinc ABC transporter, periplasmic-binding protein ZnuA 2976 134 55989 alignment trimmed tree collapsed 0.007 1.141
3948 179 Zinc ABC transporter, periplasmic-binding protein ZnuA 2976 131 O157:H7 str. EC4042 alignment trimmed tree collapsed 0.082 0.790
3949 179 Zinc ABC transporter, ATP-binding protein ZnuC 2977 180 IAI39 alignment trimmed tree collapsed 0.000 0.604
3950 179 Zinc ABC transporter, inner membrane permease protein ZnuB 175 B171 alignment trimmed tree collapsed 0.008 0.631
3951 179 Holliday junction DNA helicase RuvB 2979 127 UM146 alignment trimmed tree collapsed 0.003 0.509
3952 179 Holliday junction DNA helicase RuvA 2980 130 H299 alignment trimmed tree collapsed 0.000 0.591
3953 179 hypothetical protein 18 B088 alignment trimmed tree collapsed 0.030 0.192
3954 179 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) 131 53638 alignment trimmed tree collapsed 0.000 0.168
3955 179 FIG000859: hypothetical protein 3531 1717 2147 261 O111:H- str. 11128 alignment trimmed tree collapsed 0.000 1.085
3956 179 Dihydroneopterin triphosphate pyrophosphohydolase type 2 1716 133 O157:H7 str. EC4501 alignment trimmed tree collapsed 0.010 0.757
3957 179 Dihydroneopterin triphosphate pyrophosphohydolase type 2 1716 131 O157:H7 str. EC4501 alignment trimmed tree collapsed 0.059 6.691
3958 179 Aspartyl-tRNA synthetase (EC 6.1.1.12) ## unambiguous 130 UMN026 alignment trimmed tree collapsed 0.003 1.441
3959 179 Nicotinamidase/isochorismatase family protein 4267 139 H591 alignment trimmed tree collapsed 0.022 0.302
3960 179 COG1801: Uncharacterized conserved protein 118 MS 196-1 alignment trimmed tree collapsed 0.008 0.071
3961 179 Putative inner membrane protein 322 132 UM146 alignment trimmed tree collapsed 0.008 1.520
3962 179 tRNA (uridine-5-oxyacetic acid methyl ester) 34 synthase 1
3963 179 tRNA (uridine-5-oxyacetic acid methyl ester) 34 synthase 323 134 O157:H7 EDL933 alignment trimmed tree collapsed 0.000 0.512
3964 179 tRNA (5-methoxyuridine) 34 synthase 324 132 W alignment trimmed tree collapsed 0.020 1.158
3965 179 Trimethylamine-N-oxide reductase (EC 1.6.6.9) 3634 325 2359 280 55989 alignment trimmed tree collapsed 1.838 1.162
3966 179 Functional role page for Cytochrome c-type protein TorY 4603 326 3307 262 B185 alignment trimmed tree collapsed 0.003 1.247
3967 179 Cytoplasmic copper homeostasis protein cutC 1
3968 179 Protein yecM 328 132 MS 145-7 alignment trimmed tree collapsed 0.017 0.982
3969 179 Arginyl-tRNA synthetase (EC 6.1.1.19) 329 131 55989 alignment trimmed tree collapsed 0.000 0.153
3970 179 hypothetical protein 330 89 H736 alignment trimmed tree collapsed 0.013 0.815
3971 179 Flagellar protein FlhE 331 87 W alignment trimmed tree collapsed 0.000 1.001
3972 179 Flagellar biosynthesis protein FlhA 332 170 DH1 alignment trimmed tree collapsed 0.004 0.560
3973 179 Flagellar biosynthesis protein FlhB 333 154 IAI39 alignment trimmed tree collapsed 0.011 0.445
3974 179 hypothetical protein 334 117 OP50 alignment trimmed tree collapsed 0.214 0.490
3975 179 Chemotaxis response - phosphatase CheZ 335 133 E2348/69 alignment trimmed tree collapsed 0.005 0.148
3976 179 Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY 817 820 1034 1159 1278 1797 1980 2084 2102 2677 2783 2785 2798 2984 3304 3445 3503 3977 4458 4540 4551 5040 5082 5259 336 337 467 540 567 659 881 1024 1455 1706 1775 2034 2037 2248 2332 2393 2394 2397 2622 3432 3452 3583 3748 3826 4433 3442 536A alignment trimmed tree collapsed 2.354 0.733
3977 179 Chemotaxis response regulator protein-glutamate methylesterase CheB (EC 3.1.1.61) 337 130 IAI1 alignment trimmed tree collapsed 0.000 0.142
3978 179 Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) 128 101-1 alignment trimmed tree collapsed 0.008 0.711
3979 179 Methyl-accepting chemotaxis protein IV (dipeptide chemoreceptor protein) 770 65 4679 4680 348 str. K-12 substr. MG1655 alignment trimmed tree collapsed 0.933 1.615
3980 179 Methyl-accepting chemotaxis protein II (aspartate chemoreceptor protein) 770 65 4680 290 CFT073 alignment trimmed tree collapsed 0.569 0.416
3981 179 Methyl-accepting chemotaxis protein II (aspartate chemoreceptor protein) 770 3979 65 3614 4679 4680 418 SMS-3-5 alignment trimmed tree collapsed 0.784 0.670
3982 179 Positive regulator of CheA protein activity (CheW) 4681 133 O127:H6 str. E2348/69 alignment trimmed tree collapsed 0.000 0.257
3983 179 Signal transduction histidine kinase CheA (EC 2.7.3.-) 4682 126 E22 alignment trimmed tree collapsed 0.009 1.010
3984 179 Flagellar motor rotation protein MotB 4683 148 TA143 alignment trimmed tree collapsed 0.000 0.367
3985 179 Flagellar motor rotation protein MotA 4684 146 DH1 alignment trimmed tree collapsed 0.007 0.352
3986 179 Flagellar transcriptional activator FlhC 127 TA271 alignment trimmed tree collapsed 0.000 0.384
3987 179 Flagellar transcriptional activator FlhD 4658 121 E2348/69 alignment trimmed tree collapsed 0.000 0.491
3988 179 FIG00639516: hypothetical protein 4659 34 MS 116-1 alignment trimmed tree collapsed 0.042 0.072
3989 179 Universal stress protein C 1339 2120 1147 1852 4126 401 55989 alignment trimmed tree collapsed 0.021 0.163
3990 179 Alpha,alpha-trehalose-phosphate synthase [UDP-forming] (EC 2.4.1.15) 1853 132 O55:H7 str. CB9615 alignment trimmed tree collapsed 0.000 0.706
3991 179 Trehalose-6-phosphate phosphatase (EC 3.1.3.12) 1854 131 E110019 alignment trimmed tree collapsed 0.023 0.162
3992 179 L-arabinose transport system permease protein (TC 3.A.1.2.2) 3222 496 1855 336 MS 115-1 alignment trimmed tree collapsed 0.010 0.467
3993 179 L-arabinose transport ATP-binding protein AraG (TC 3.A.1.2.2) 926 1461 1645 2071 3223 5476 210 497 835 2530 972 E110019 alignment trimmed tree collapsed 3.414 0.424
3994 179 L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2) 1857 134 IAI1 alignment trimmed tree collapsed 0.000 0.155
3995 179 Ferritin-like protein 2 4000 717 722 261 UTI89 alignment trimmed tree collapsed 0.000 0.638
3996 179 hypothetical protein 721 129 B7A alignment trimmed tree collapsed 0.000 0.637
3997 179 hypothetical protein 720 110 M718 alignment trimmed tree collapsed 0.084 0.374
3998 179 conserved hypothetical protein 719 126 042 alignment trimmed tree collapsed 0.029 1.237
3999 179 hypothetical protein 718 125 55989 alignment trimmed tree collapsed 0.051 0.194
4000 179 Ferritin-like protein 2 3995 717 722 261 042 alignment trimmed tree collapsed 0.000 0.912
4001 179 Uncharacterized protein YecH 716 133 B171 alignment trimmed tree collapsed 0.000 0.708
4002 179 hypothetical protein 715 78 ETEC H10407 alignment trimmed tree collapsed 0.000 0.162
4003 179 Tyrosine-specific transport protein 1595 1746 714 1913 2500 390 H736 alignment trimmed tree collapsed 0.000 1.416
4004 179 hypothetical protein 713 135 55989 alignment trimmed tree collapsed 0.005 0.155
4005 180 Starvation sensing protein RspB 973 1290 1494 2973 3170 3842 5301 5373 68 292 399 670 1201 2255 2613 2743 3067 3795 1081 55989 alignment trimmed tree collapsed 2.974 0.213
4006 181 hypothetical protein 3395 250 MS 145-7 alignment trimmed tree collapsed 0.073 0.328
4007 182 Primosomal protein I 273 4335 954 154 MS 119-7 alignment trimmed tree collapsed 0.039 0.380
4008 183 Holliday junction resolvase / Crossover junction endodeoxyribonuclease rusA (EC 3.1.22.-) 66 552 4837 271 1125 2788 441 E110019 alignment trimmed tree collapsed 0.066 0.769
4009 183 Putative cytoplasmic protein 550 1126 2790 365 E110019 alignment trimmed tree collapsed 0.020 0.479
4010 184 hypothetical protein 4333 14 CFT073 alignment trimmed tree collapsed 0.024 1.774
4011 185 Phage tail fiber assembly protein 4875 316 M718 alignment trimmed tree collapsed 0.297 0.749
4012 185 Phage tail fiber assembly protein 71 APEC O1 alignment trimmed tree collapsed 0.079 0.083
4013 185 hypothetical protein 1997 54 042 alignment trimmed tree collapsed 0.000 0.807
4014 185 Protein yciE 1996 147 55989 alignment trimmed tree collapsed 0.023 0.180
4015 185 Protein yciF 1995 144 042 alignment trimmed tree collapsed 0.006 0.526
4016 185 Conidiation-specific protein 10 1994 200 B354 alignment trimmed tree collapsed 0.000 0.869
4017 185 Tryptophan synthase alpha chain (EC 4.2.1.20) 1993 133 E24377A alignment trimmed tree collapsed 0.016 0.148
4018 185 Tryptophan synthase beta chain (EC 4.2.1.20) 1992 134 MS 107-1 alignment trimmed tree collapsed 0.009 0.609
4019 185 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) 1991 133 O111:H- str. 11128 alignment trimmed tree collapsed 0.025 0.938
4020 185 Anthranilate synthase, amidotransferase component (EC 4.1.3.27) / Anthranilate phosphoribosyltransferase (EC 2.4.2.18) 132 IAI1 alignment trimmed tree collapsed 0.005 0.679
4021 185 Anthranilate synthase, aminase component (EC 4.1.3.27) 1988 127 55989 alignment trimmed tree collapsed 0.010 0.949
4022 185 COG0613, Predicted metal-dependent phosphoesterases (PHP family) 1987 130 TA271 alignment trimmed tree collapsed 0.000 0.344
4023 185 YciO family 1986 131 UTI89 alignment trimmed tree collapsed 0.000 0.177
4024 185 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) ## LSU Psi2605 1050 1985 2947 258 EC4100B alignment trimmed tree collapsed 0.004 0.948
4025 185 Cob(I)alamin adenosyltransferase (EC 2.5.1.17) 1984 176 MS 107-1 alignment trimmed tree collapsed 0.021 0.582
4026 185 Putative oxidoreductase 953 2348 2422 2654 2841 1313 1489 1793 1983 4594 4678 800 MS 145-7 alignment trimmed tree collapsed 2.527 1.626
4027 185 Possible protease sohB (EC 3.4.21.-) 1982 132 O157:H7 str. EC4196 alignment trimmed tree collapsed 0.000 1.030
4028 185 Protein yciN 1981 133 F11 alignment trimmed tree collapsed 0.000 0.152
4029 185 FIG00643478: hypothetical protein 1980 23 MS 107-1 alignment trimmed tree collapsed 0.000 0.213
4030 185 DNA topoisomerase I (EC 5.99.1.2) 1979 129 W alignment trimmed tree collapsed 0.000 0.571
4031 185 Cys regulon transcriptional activator CysB 2817 3641 3526 3962 331 042 alignment trimmed tree collapsed 1.998 4.524
4032 185 Cys regulon transcriptional activator CysB 3535 781 1978 249 1212A alignment trimmed tree collapsed 1.247 0.926
4033 185 hypothetical protein 126 042 alignment trimmed tree collapsed 0.000 0.508
4034 185 hypothetical protein 2970 126 B171 alignment trimmed tree collapsed 0.018 0.614
4035 185 COG1048: Aconitase A( EC:4.2.1.3 ) 2969 121 MS 119-7 alignment trimmed tree collapsed 0.013 1.258
4036 185 COG1048: Aconitase A( EC:4.2.1.3 ) 2969 130 MS 78-1 alignment trimmed tree collapsed 0.014 0.517
4037 185 GTP cyclohydrolase II (EC 3.5.4.25) 2968 131 IAI39 alignment trimmed tree collapsed 0.000 0.099
4038 185 Phosphatidylglycerophosphatase B (EC 3.1.3.27) 2967 132 MS 21-1 alignment trimmed tree collapsed 0.000 0.714
4039 185 Inner membrane protein yciS 2966 131 O103:H2 str. 12009 alignment trimmed tree collapsed 0.020 0.896
4040 185 Heat shock (predicted periplasmic) protein YciM, precursor 2965 127 BL21 alignment trimmed tree collapsed 0.003 0.490
4041 185 hypothetical protein 120 B7A alignment trimmed tree collapsed 0.063 0.075
4042 185 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) 2964 132 OP50 alignment trimmed tree collapsed 0.004 0.340
4043 185 Translation initiation factor SUI1-related protein 2963 134 MS 187-1 alignment trimmed tree collapsed 0.019 0.870
4044 185 Osmotically inducible lipoprotein B precursor 2962 131 M718 alignment trimmed tree collapsed 0.000 0.232
4045 185 Transcriptional regulatory protein YciT 675 888 1711 2569 2605 2702 3169 80 749 1130 2742 2961 3206 3806 4620 1060 TA271 alignment trimmed tree collapsed 2.363 0.025
4046 185 orf; Unknown function 1
4047 185 hypothetical protein 2959 120 MS 78-1 alignment trimmed tree collapsed 0.012 1.229
4048 185 Exoribonuclease II (EC 3.1.13.1) 2958 131 MS 124-1 alignment trimmed tree collapsed 0.000 1.283
4049 185 Putative oxidoreductase 2957 131 KO11 alignment trimmed tree collapsed 0.048 0.637
4050 185 Enoyl-[acyl-carrier-protein] reductase [NADH] (EC 1.3.1.9) 953 2348 2422 2654 2841 3668 1313 1489 1793 2956 4594 4678 1092 ETEC H10407 alignment trimmed tree collapsed 0.000 2.224
4051 185 FIG00638073: hypothetical protein 2955 62 E22 alignment trimmed tree collapsed 0.045 0.815
4052 185 Peptide transport system ATP-binding protein sapF (TC 3.A.1.5.5) 1142 1857 2183 2184 3086 3448 4053 4230 4231 4567 4672 4701 5555 623 2273 2517 2697 2698 3285 3286 3358 3384 3654 3655 3778 3838 4758 4790 1997 B185 alignment trimmed tree collapsed 2.203 0.376
4053 185 Peptide transport system ATP-binding protein SapD (TC 3.A.1.5.5) 2183 2184 4230 4231 4566 4567 2697 2698 3285 3383 3384 3654 3655 868 O157:H7 str. EC4501 alignment trimmed tree collapsed 1.618 1.178
4054 185 Peptide transport system permease protein sapC (TC 3.A.1.5.5) 2185 4565 4676 3284 3382 3656 3775 560 BL21 alignment trimmed tree collapsed 1.365 1.101
4055 185 Peptide transport system permease protein sapB (TC 3.A.1.5.5) 2062 2186 4564 1876 3283 3381 3657 3776 611 K12 alignment trimmed tree collapsed 1.743 1.402
4056 185 Peptide transport periplasmic protein sapA (TC 3.A.1.5.5) 2188 3282 262 1827-70 alignment trimmed tree collapsed 0.009 0.676
4057 185 hypothetical protein 3281 133 O157:H7 str. EC4045 alignment trimmed tree collapsed 0.013 0.769
4058 185 Putrescine importer 3589 1284 3280 235 ATCC 8739 alignment trimmed tree collapsed 0.539 0.128
4059 185 Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) 3279 103 55989 alignment trimmed tree collapsed 0.000 0.368
4060 185 Gamma-glutamyl-GABA hydrolase (EC 3.5.1.94) 3278 92 55989 alignment trimmed tree collapsed 0.009 1.787
4061 185 Putrescine utilization regulator 4175 3277 4835 231 MS 84-1 alignment trimmed tree collapsed 2.211 0.677
4062 185 Gamma-glutamyl-aminobutyraldehyde dehydrogenase (EC 1.2.1.-) 4123 4154 4186 5460 3276 3618 3644 3726 4846 563 IAI1 alignment trimmed tree collapsed 1.604 0.185
4063 185 Gamma-glutamyl-putrescine oxidase (EC1.4.3.-) 3275 101 E22 alignment trimmed tree collapsed 0.000 1.082
4064 185 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) 3070 383 3274 236 E22 alignment trimmed tree collapsed 0.823 1.179
4065 185 Psp operon transcriptional activator 1034 1278 2571 2984 4087 659 1433 2622 3273 3452 4277 891 E24377A alignment trimmed tree collapsed 1.655 0.799
4066 185 Phage shock protein A 3272 132 MS 175-1 alignment trimmed tree collapsed 0.000 0.595
4067 185 Phage shock protein B 3271 134 E24377A alignment trimmed tree collapsed 0.028 0.236
4068 185 Phage shock protein C 3270 134 E22 alignment trimmed tree collapsed 0.009 0.918
4069 185 Phage shock protein D 3269 134 042 alignment trimmed tree collapsed 0.000 0.342
4070 185 Phage shock protein E precursor 1998 134 MS 116-1 alignment trimmed tree collapsed 0.010 0.830
4071 185 Putative sucrose phosphorylase (EC 2.4.1.7) 1447 82 E24377A alignment trimmed tree collapsed 0.059 0.928
4072 185 ABC-type sugar transport system, periplasmic binding protein YcjN 1446 122 KO11 alignment trimmed tree collapsed 0.013 0.915
4073 185 ABC-type sugar transport system, periplasmic binding protein YcjN 1446 99 E110019 alignment trimmed tree collapsed 0.004 0.139
4074 185 Inner membrane ABC transporter permease protein YcjO 2034 1903 251 SMS-3-5 alignment trimmed tree collapsed 0.000 0.301
4075 185 Inner membrane ABC transporter permease protein YcjP 1066 2033 1444 1904 2932 393 IAI39 alignment trimmed tree collapsed 0.000 1.068
4076 185 Zinc-type alcohol dehydrogenase YcjQ 1443 121 MS 78-1 alignment trimmed tree collapsed 0.000 0.669
4077 185 Sugar phosphate isomerases/epimerases family protein YcjR 1442 123 IAI1 alignment trimmed tree collapsed 0.009 0.600
4078 185 Putative oxidoreductase YcjS (EC 1.-.-.-), NADH-binding 1441 120 EC4100B alignment trimmed tree collapsed 0.018 0.869
4079 185 Maltose phosphorylase (EC 2.4.1.8) / Trehalose phosphorylase (EC 2.4.1.64) 1440 117 MS 78-1 alignment trimmed tree collapsed 0.112 0.345
4080 185 Beta-phosphoglucomutase (EC 5.4.2.6) 1439 92 W alignment trimmed tree collapsed 0.081 5.965
4081 185 Beta-phosphoglucomutase (EC 5.4.2.6) 1439 123 E22 alignment trimmed tree collapsed 0.018 0.870
4082 185 Multiple sugar ABC transporter, ATP-binding protein 2032 1438 1905 2929 386 55989 alignment trimmed tree collapsed 1.072 0.173
4083 185 Outer membrane protein G precursor 1437 121 55989 alignment trimmed tree collapsed 0.000 0.880
4084 185 Transcriptional regulator YcjW, LacI family, possibly involved in maltodextrin utilization pathway 666 942 970 1350 1465 2021 2229 2577 2734 2778 3225 3669 3714 5358 499 821 963 1198 1436 1745 1860 1942 2526 3715 3862 3940 4011 4361 4455 1632 55989 alignment trimmed tree collapsed 2.352 0.231
4085 185 Conserved protein YcjX with nucleoside triphosphate hydrolase domain 132 UMN026 alignment trimmed tree collapsed 0.003 1.022
4086 185 Membrane protein YcjF 1434 131 TA271 alignment trimmed tree collapsed 0.009 1.371
4087 185 Transcriptional repressor protein TyrR 1433 131 ETEC H10407 alignment trimmed tree collapsed 0.000 0.899
4088 185 Thiol peroxidase, Tpx-type (EC 1.11.1.15) 1432 135 O83:H1 str. NRG 857C alignment trimmed tree collapsed 0.000 0.263
4089 185 L-alanine-DL-glutamate epimerase 1431 2132 260 TA143 alignment trimmed tree collapsed 1.720 0.711
4090 185 Gamma-D-Glutamyl-meso-Diaminopimelate Amidase 1430 129 83972 alignment trimmed tree collapsed 0.009 1.472
4091 185 Oxidoreductase (putative) 1429 128 MS 78-1 alignment trimmed tree collapsed 0.018 1.829
4092 185 Dienelactone hydrolase and related enzymes 1428 244 B7A alignment trimmed tree collapsed 1.176 0.849
4093 185 LysR family transcriptional regulator YcjZ 2153 4749 5493 618 766 1427 4342 633 55989 alignment trimmed tree collapsed 1.850 0.591
4094 185 hypothetical protein 257 956 1426 118 E24377A alignment trimmed tree collapsed 0.285 0.517
4095 185 Periplasmic Murein Peptide-Binding Protein MppA 4563 1425 2694 3380 406 O111:H- str. 11128 alignment trimmed tree collapsed 0.968 0.568
4096 185 Mechanosensitive ion channel 2449 1424 3326 268 MS 78-1 alignment trimmed tree collapsed 0.017 3.517
4097 185 Mechanosensitive ion channel 1424 133 UTI89 alignment trimmed tree collapsed 0.001 0.216
4098 185 Putative inner membrane protein 1423 133 O103:H2 str. 12009 alignment trimmed tree collapsed 0.000 0.124
4099 185 Universal stress protein E 1422 132 1125A alignment trimmed tree collapsed 0.005 4.010
4100 185 Fumarate and nitrate reduction regulatory protein 1421 129 101-1 alignment trimmed tree collapsed 0.000 0.349
4101 185 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) 1337 132 MS 107-1 alignment trimmed tree collapsed 0.019 0.085
4102 185 Aminobenzoyl-glutamate transport protein 1336 89 B7A alignment trimmed tree collapsed 0.003 0.566
4103 185 Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit B 1335 99 B185 alignment trimmed tree collapsed 0.015 0.114
4104 185 Catalyzes the cleavage of p-aminobenzoyl-glutamate to p-aminobenzoate and glutamate, subunit A 1334 160 MS 78-1 alignment trimmed tree collapsed 0.003 0.747
4105 185 Regulatory protein (induces abgABT, used to catabolize p-aminobenzoyl-glutamate) 739 994 1384 1392 1827 2212 2444 2705 2736 2817 2823 2965 3008 3536 3641 3875 4031 4093 4161 4278 4749 5351 5493 5574 18 98 766 782 965 1115 1123 1333 1338 1427 1978 2190 2211 2366 2605 2646 2876 3330 3526 3575 3803 3962 4133 4342 4442 3618 SE11 alignment trimmed tree collapsed 1.990 0.843
4106 185 Regulatory protein (induces abgABT, used to catabolize p-aminobenzoyl-glutamate) 1695 1333 3962 240 MS 119-7 alignment trimmed tree collapsed 0.007 1.022
4107 185 hypothetical protein 1332 3132 261 55989 alignment trimmed tree collapsed 0.012 1.103
4108 185 hypothetical protein 1331 129 IAI1 alignment trimmed tree collapsed 0.008 1.052
4109 185 hypothetical protein 1330 130 B354 alignment trimmed tree collapsed 0.007 0.367
4110 185 ATP-dependent RNA helicase DbpA 130 55989 alignment trimmed tree collapsed 0.018 1.253
4111 185 tRNA(Cytosine32)-2-thiocytidine synthetase 1329 131 55989 alignment trimmed tree collapsed 0.034 0.212
4112 185 Universal stress protein F 4099 5300 400 1328 1422 393 B7A alignment trimmed tree collapsed 0.013 0.987
4113 185 Outer membrane protein N precursor 3300 4782 4840 5404 563 1327 1371 1839 3089 699 IAI39 alignment trimmed tree collapsed 0.000 0.593
4114 185 Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-) 3652 125 ETEC H10407 alignment trimmed tree collapsed 0.006 0.158
4115 185 FIG00643271: hypothetical protein 47 CFT073 alignment trimmed tree collapsed 0.000 0.211
4116 185 probable lipoprotein YPO2331 3651 132 M605 alignment trimmed tree 0.000 0.000
4117 185 Heat shock protein hslJ 3650 132 MS 84-1 alignment trimmed tree collapsed 0.014 0.103
4118 185 D-lactate dehydrogenase (EC 1.1.1.28) 3649 130 IAI1 alignment trimmed tree collapsed 0.003 0.441
4119 185 Putative uncharacterized protein ydbH 3648 128 MS 78-1 alignment trimmed tree collapsed 0.014 0.783
4120 185 Uncharacterized protein ynbE; probable lipoprotein STY1424 3647 134 MS 116-1 alignment trimmed tree collapsed 0.000 0.693
4121 185 Putative uncharacterized protein ydbL, may be related to amine metabolism 3646 132 E2348/69 alignment trimmed tree collapsed 0.000 0.643
4122 185 regulatory protein for 2-phenylethylamine catabolism 3645 60 55989 alignment trimmed tree collapsed 0.021 2.015
4123 185 Phenylacetaldehyde dehydrogenase (EC 1.2.1.39) 3069 4062 4154 4186 5460 382 3276 3618 3644 3726 4846 646 55989 alignment trimmed tree collapsed 1.557 1.435
4124 185 Monoamine oxidase (1.4.3.4) 3643 53 55989 alignment trimmed tree collapsed 0.010 1.691
4125 185 FIG00642135: hypothetical protein 3642 31 O26:H11 str. 11368 alignment trimmed tree collapsed 0.054 0.749
4126 185 Phenylacetic acid degradation protein PaaN, ring-opening aldehyde dehydrogenase (EC 1.2.1.3) 3641 56 O26:H11 str. 11368 alignment trimmed tree collapsed 0.009 1.055
4127 185 Phenylacetate-CoA oxygenase, PaaG subunit 3640 54 B7A alignment trimmed tree collapsed 0.104 7.280
4128 185 Phenylacetate-CoA oxygenase, PaaG subunit 3640 56 B7A alignment trimmed tree collapsed 0.005 0.459
4129 185 Phenylacetate-CoA oxygenase, PaaH subunit 3639 54 O26:H11 str. 11368 alignment trimmed tree collapsed 0.000 0.319
4130 185 Phenylacetate-CoA oxygenase, PaaI subunit 3638 56 55989 alignment trimmed tree collapsed 0.005 0.174
4131 185 Phenylacetate-CoA oxygenase, PaaJ subunit 3637 55 HS alignment trimmed tree collapsed 0.013 0.929
4132 185 Phenylacetate-CoA oxygenase/reductase, PaaK subunit 3879 4719 1344 3636 3855 287 E110019 alignment trimmed tree collapsed 2.396 1.509
4133 185 Phenylacetate degradation enoyl-CoA hydratase PaaA (EC 4.2.1.17) 3341 4134 5594 1593 2133 3634 3635 471 55989 alignment trimmed tree collapsed 1.692 0.100
4134 185 Phenylacetate degradation enoyl-CoA hydratase PaaB (EC 4.2.1.17) 2442 3341 4133 5594 1593 2133 3331 3634 3635 556 55989 alignment trimmed tree collapsed 2.080 1.120
4135 185 3-hydroxyacyl-CoA dehydrogenase PaaC (EC 1.1.1.-) 3633 53 55989 alignment trimmed tree collapsed 0.002 0.109
4136 185 Phenylacetic acid degradation protein PaaD, thioesterase 3632 54 MS 146-1 alignment trimmed tree collapsed 0.000 0.321
4137 185 Phenylacetic acid degradation protein PaaE, ketothiolase 1256 2742 3430 792 2012 3495 3631 527 E22 alignment trimmed tree collapsed 0.003 0.665
4138 185 Phenylacetate-coenzyme A ligase (EC 6.2.1.30) PaaF 1
4139 185 Phenylacetate-coenzyme A ligase (EC 6.2.1.30) PaaF 3630 54 H591 alignment trimmed tree collapsed 0.000 0.275
4140 185 Phenylacetic acid degradation operon negative regulatory protein PaaX 3629 56 55989 alignment trimmed tree collapsed 0.032 6.629
4141 185 Phenylacetic acid degradation operon negative regulatory protein PaaX 3629 56 K12 alignment trimmed tree collapsed 0.018 0.227
4142 185 Phenylacetic acid degradation protein PaaY 5593 1594 3628 194 MS 69-1 alignment trimmed tree collapsed 0.681 1.468
4143 185 Aldo-keto reductase 2730 3839 5557 295 960 990 3627 4341 810 H736 alignment trimmed tree collapsed 0.007 1.089
4144 185 FIG00638288: hypothetical protein 1
4145 185 hypothetical protein 3626 127 53638 alignment trimmed tree collapsed 1.753 0.524
4146 185 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC 2.7.8.5) 3625 121 E110019 alignment trimmed tree collapsed 0.032 0.400
4147 185 Phosphatidate cytidylyltransferase (EC 2.7.7.41) 116 55989 alignment trimmed tree collapsed 0.073 0.807
4148 185 Putative lipase in cluster with Phosphatidate cytidylyltransferase 3623 118 55989 alignment trimmed tree collapsed 0.000 0.919
4149 185 Ser/Thr and Tyr protein phosphatase (dual specificity) 3622 117 MS 124-1 alignment trimmed tree collapsed 0.020 0.411
4150 185 FMN-dependent NADH-azoreductase 3621 141 O111:H- str. 11128 alignment trimmed tree collapsed 0.006 0.242
4151 185 ATP-dependent helicase hrpA 3620 130 B7A alignment trimmed tree collapsed 0.005 0.287
4152 185 ATP-dependent helicase hrpA 3620 134 TA280 alignment trimmed tree collapsed 0.007 1.032
4153 185 Protein ydcF 3619 124 55989 alignment trimmed tree collapsed 0.030 0.551
4154 185 Aldehyde dehydrogenase A (EC 1.2.1.22) / Glycolaldehyde dehydrogenase (EC 1.2.1.21) 1670 3069 4062 4123 4186 5460 382 2222 3276 3618 3644 3726 4846 839 KO11 alignment trimmed tree collapsed 2.080 1.008
4155 185 NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) 2452 3847 287 3008 3617 380 55989 alignment trimmed tree collapsed 1.292 0.406
4156 185 Cytochrome b(561) 4375 1625 3616 288 042 alignment trimmed tree collapsed 2.002 1.108
4157 185 hypothetical protein 3615 137 E22 alignment trimmed tree collapsed 0.000 0.327
4158 185 Methyl-accepting chemotaxis protein III (ribose and galactose chemoreceptor protein) 3614 68 W alignment trimmed tree collapsed 0.000 0.487
4159 185 Methyl-accepting chemotaxis protein III (ribose and galactose chemoreceptor protein) 3979 3614 4679 4680 360 55989 alignment trimmed tree collapsed 0.010 0.552
4160 185 LysR family transcriptional regulator YdcI 3613 165 W alignment trimmed tree collapsed 1.920 0.522
4161 185 LysR family transcriptional regulator YdcI 994 1392 2736 2817 2823 3641 4278 4749 5351 18 766 965 1115 1978 2018 2876 3526 3575 4133 1364 B7A alignment trimmed tree collapsed 2.604 0.065
4162 185 Putative cytoplasmic protein 3612 126 TA271 alignment trimmed tree collapsed 0.010 0.811
4163 185 Glucans biosynthesis protein D precursor 3611 126 MS 45-1 alignment trimmed tree collapsed 0.053 10.368
4164 185 Glucans biosynthesis protein D precursor 4364 422 3611 260 MS 21-1 alignment trimmed tree collapsed 1.068 1.125
4165 185 YdcH protein 3610 130 MS 84-1 alignment trimmed tree collapsed 0.000 0.183
4166 185 Ribosomal-protein-L7p-serine acetyltransferase 3609 98 APEC O1 alignment trimmed tree collapsed 0.006 1.008
4167 185 FIG005189: putative transferase clustered with tellurite resistance proteins TehA/TehB 3608 124 55989 alignment trimmed tree collapsed 0.065 0.285
4168 185 Tellurite resistance protein TehA 3607 128 042 alignment trimmed tree collapsed 0.007 0.050
4169 185 Tellurite resistance protein TehB 3606 129 55989 alignment trimmed tree collapsed 0.006 0.454
4170 185 hypothetical protein 3605 74 MS 200-1 alignment trimmed tree collapsed 0.000 0.206
4171 185 Uncharacterized membrane lipoprotein clustered with tellurite resistance proteins TehA/TehB 3604 117 B7A alignment trimmed tree collapsed 0.005 0.466
4172 185 Putative transposase TnpA of insertion sequence IS609 903 91 KO11 alignment trimmed tree collapsed 0.704 0.405
4173 185 putative virulence protein 904 3869 170 55989 alignment trimmed tree collapsed 0.030 0.392
4174 185 Benzoate transport protein 4834 107 str. K-12 substr. DH10B alignment trimmed tree collapsed 0.016 0.978
4175 185 Transcriptional regulator yidN, Cro/CI family 4061 3277 4835 230 55989 alignment trimmed tree collapsed 0.023 0.788
4176 185 Putative collagenase 3166 261 4836 255 101-1 alignment trimmed tree collapsed 1.362 1.010
4177 185 COG0826: Collagenase and related proteases 4836 127 KO11 alignment trimmed tree collapsed 0.004 0.015
4178 185 hypothetical protein 4837 128 E110019 alignment trimmed tree collapsed 0.018 0.218
4179 185 hypothetical protein 4838 117 FVEC1412 alignment trimmed tree collapsed 0.000 0.553
4180 185 hypothetical protein 4840 95 E22 alignment trimmed tree collapsed 0.000 0.446
4181 185 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) 756 51 4841 202 55989 alignment trimmed tree collapsed 1.402 0.828
4182 185 ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) 4842 125 ETEC H10407 alignment trimmed tree collapsed 0.014 0.709
4183 185 Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) 4453 4701 5476 210 1710 3838 4843 389 B185 alignment trimmed tree collapsed 1.342 0.708
4184 185 Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) 4844 121 O26:H11 str. 11368 alignment trimmed tree collapsed 0.004 0.844
4185 185 Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) 4703 3840 4845 259 MS 69-1 alignment trimmed tree collapsed 0.005 0.278
4186 185 4-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) 1670 3069 3810 4062 4123 4154 5460 382 1233 2222 3276 3618 3644 3726 4846 958 55989 alignment trimmed tree collapsed 1.575 0.669
4187 185 Putative acetyltransferase 23 IAI1 alignment trimmed tree collapsed 0.026 0.656
4188 185 hypothetical protein 1176 1830 3978 253 55989 alignment trimmed tree collapsed 0.014 3.277
4189 185 hypothetical protein 1829 129 536 alignment trimmed tree collapsed 0.000 0.154
4190 185 Putative inner membrane protein 1828 125 SE11 alignment trimmed tree collapsed 0.014 0.716
4191 185 Putative acetyltransferase 88 MS 21-1 alignment trimmed tree collapsed 0.016 0.640
4192 185 Putative oxidoreductase YncB 1826 102 E22 alignment trimmed tree collapsed 0.019 0.145
4193 185 Transcriptional regulator, GntR family 5673 366 1825 236 E110019 alignment trimmed tree collapsed 0.034 0.891
4194 185 Transcriptional regulator, GntR family 1825 102 ATCC 8739 alignment trimmed tree collapsed 0.032 0.414
4195 185 Probable tonB-dependent receptor yncD precursor 4914 1824 249 55989 alignment trimmed tree collapsed 2.064 0.203
4196 185 hypothetical protein 1823 126 M718 alignment trimmed tree collapsed 0.009 0.717
4197 185 L-asparagine permease 1822 121 1044A alignment trimmed tree collapsed 0.000 0.892
4198 185 Uncharacterized GST-like protein yncG 3686 1821 4692 195 55989 alignment trimmed tree collapsed 1.918 0.826
4199 185 FIG00641230: hypothetical protein 37 MS 182-1 alignment trimmed tree collapsed 0.015 0.820
4200 185 VgrG protein 5524 113 55989 alignment trimmed tree collapsed 0.035 1.547
4201 185 core protein 1354 5049 5525 339 55989 alignment trimmed tree collapsed 0.047 0.062
4202 185 core protein 12 55989 alignment trimmed tree collapsed 0.074 1.740
4203 185 DsORF-h1 4581 19 55989 alignment trimmed tree collapsed 0.000 0.236
4204 185 Transposase 5249 5528 5530 4804 343 MS 107-1 alignment trimmed tree collapsed 0.585 0.418
4205 185 Probable tautomerase ydcE (EC 5.3.2.-) 86 99 O157:H7 str. EC4486 alignment trimmed tree collapsed 0.000 0.427
4206 185 NAD(P)H-flavin oxidoreductase 93 E24377A alignment trimmed tree collapsed 0.043 0.975
4207 185 N-hydroxyarylamine O-acetyltransferase (EC 2.3.1.118) 88 104 B185 alignment trimmed tree collapsed 0.000 1.220
4208 185 Phenazine biosynthesis protein PhzF 89 123 SE11 alignment trimmed tree collapsed 0.060 0.166
4209 185 Respiratory nitrate reductase gamma chain (EC 1.7.99.4) 1031 257 55989 alignment trimmed tree collapsed 0.444 1.341
4210 185 Respiratory nitrate reductase delta chain (EC 1.7.99.4) 4546 1030 3347 260 B171 alignment trimmed tree collapsed 0.706 0.340
4211 185 Respiratory nitrate reductase beta chain (EC 1.7.99.4) 4545 1029 3348 264 55989 alignment trimmed tree collapsed 0.011 0.388
4212 185 Respiratory nitrate reductase alpha chain (EC 1.7.99.4) 4544 1028 251 B7A alignment trimmed tree collapsed 0.270 0.430
4213 185 Nitrate/nitrite transporter 4543 1027 254 E2348/69 alignment trimmed tree collapsed 0.003 1.434
4214 185 internalin, putative 35 MS 119-7 alignment trimmed tree collapsed 0.005 0.609
4215 185 putative outer membrane porin protein 3300 3493 4782 4840 5404 563 1371 1839 3089 3671 4657 749 TA280 alignment trimmed tree collapsed 0.783 0.248
4216 185 Permease of the drug/metabolite transporter (DMT) superfamily 731 133 E2348/69 alignment trimmed tree collapsed 0.005 0.828
4218 185 Formate dehydrogenase N alpha subunit (EC 1.2.1.2) @ selenocysteine-containing 0
4217 185 Formate dehydrogenase N alpha subunit (EC 1.2.1.2) @ selenocysteine-containing 4218 123 729 730 324 F11 trimmed
4219 185 Formate dehydrogenase N alpha subunit (EC 1.2.1.2) @ selenocysteine-containing 1308 1309 4218 123 328 55989 alignment trimmed tree collapsed 0.006 0.845
4220 185 formate dehydrogenase-N, nitrate-inducible, iron-sulfur beta subunit 1307 122 2706 250 H299 alignment trimmed tree collapsed 0.000 1.413
4221 185 Formate dehydrogenase N gamma subunit (EC 1.2.1.2) 1306 121 2705 265 IAI39 alignment trimmed tree collapsed 0.000 0.800
4222 185 HigA protein (antitoxin to HigB) 5181 2704 3230 249 ATCC 8739 alignment trimmed tree collapsed 0.000 0.541
4223 185 Alcohol dehydrogenase (EC 1.1.1.1) 973 2973 5480 213 1201 2613 416 B088 alignment trimmed tree collapsed 0.000 1.329
4224 185 NAD-dependent malic enzyme (EC 1.1.1.38) 2702 136 O157:H7 str. TW14588 alignment trimmed tree collapsed 0.016 0.030
4225 185 NAD-dependent malic enzyme (EC 1.1.1.38) 2702 129 OP50 alignment trimmed tree collapsed 0.001 0.116
4226 185 FIG00638839: hypothetical protein 12 TA280 alignment trimmed tree collapsed 0.391 3.254
4227 185 Stationary-phase-induced ribosome-associated protein 2701 134 OP50 alignment trimmed tree collapsed 0.000 0.087
4228 185 Bdm protein 2700 133 042 alignment trimmed tree collapsed 0.000 0.560
4229 185 Osmotically inducible protein C 2699 133 O83:H1 str. NRG 857C alignment trimmed tree collapsed 0.000 0.732
4230 185 Dipeptide transport ATP-binding protein DppF (TC 3.A.1.5.2); puatative hemin transporter subunit 4053 4231 4566 2697 2698 3285 3383 471 TA271 alignment trimmed tree collapsed 0.029 1.449
4231 185 Dipeptide transport system permease protein DppC (TC 3.A.1.5.2); Putative hemine transporter ATP-binding subunit 2183 2184 4053 4230 4566 2697 2698 3285 3383 3654 3655 732 55989 alignment trimmed tree collapsed 1.992 0.295
4232 185 Dipeptide transport system permease protein DppC (TC 3.A.1.5.2); Putative hemine transporter ATP-binding subunit 2696 102 101-1 alignment trimmed tree collapsed 0.005 0.178
4233 185 Dipeptide transport system permease protein DppB (TC 3.A.1.5.2); putative hemin permease 2062 2186 4564 1876 2695 3381 3657 3776 577 B171 alignment trimmed tree collapsed 1.555 0.381
4234 185 Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2); Putative hemin-binding lipoprotein 2188 4056 4095 1425 2694 3282 3777 748 IAI1 alignment trimmed tree collapsed 2.561 0.358
4235 185 D-alanyl-D-alanine dipeptidase (EC 3.4.13.-); Putative metaloprotease associated with hemin utilization 2693 103 53638 alignment trimmed tree collapsed 0.000 0.183
4236 185 Heme-regulated cyclic AMP phosphodiesterase (EC 3.1.4.-) 1835 2164 4047 347 2374 2692 2959 484 W alignment trimmed tree collapsed 2.915 0.307
4237 185 Heme-regulated cyclic AMP phosphodiesterase (EC 3.1.4.-) 119 O157:H7 str. EC4042 alignment trimmed tree collapsed 0.003 0.101
4238 185 Putative Heme-regulated two-component response regulator 943 103 BW2952 alignment trimmed tree collapsed 0.000 0.164
4239 185 Putative Heme-regulated two-component response regulator 943 104 B171 alignment trimmed tree collapsed 0.000 0.062
4240 185 COG1649 predicted glycoside hydrolase 942 134 55989 alignment trimmed tree collapsed 0.003 0.334
4241 185 Probable glutamate/gamma-aminobutyrate antiporter 941 115 BL21(DE3) alignment trimmed tree collapsed 0.004 0.471
4242 185 Glutamate decarboxylase (EC 4.1.1.15) 203 W3110 alignment trimmed tree collapsed 0.014 0.355
4243 185 hypothetical protein 26 W alignment trimmed tree collapsed 0.028 0.276
4244 185 Probable zinc protease pqqL (EC 3.4.99.-) 1177 124 55989 alignment trimmed tree collapsed 0.013 0.167
4245 185 FIG00639422: hypothetical protein 1178 118 55989 alignment trimmed tree collapsed 0.012 0.562
4246 185 Hypothetical ABC transporter ATP-binding protein yddA 1179 53 O127:H6 str. E2348/69 alignment trimmed tree collapsed 0.017 0.474
4247 185 GALNS arylsulfatase regulator (Fe-S oxidoreductase) 1417 1658 254 55989 alignment trimmed tree collapsed 0.026 0.602
4248 185 GALNS arylsulfatase regulator (Fe-S oxidoreductase) 1417 1658 258 55989 alignment trimmed tree collapsed 0.859 11.169
4249 185 N-acetylgalactosamine 6-sulfate sulfatase (GALNS) 1659 114 O157:H7 alignment trimmed tree collapsed 0.006 0.686
4250 185 HTH-type transcriptional regulator ydeO 115 223 55989 alignment trimmed tree collapsed 2.280 0.819
4251 185 hypothetical protein 74 TA280 alignment trimmed tree collapsed 0.029 1.217
4252 185 Putative formate dehydrogenase oxidoreductase protein 126 MS 182-1 alignment trimmed tree collapsed 0.000 1.258
4253 185 mannose-specific adhesin FimH 1597 260 E24377A alignment trimmed tree collapsed 0.882 0.314
4254 185 type 1 fimbrae adaptor subunit FimG 1598 212 E24377A alignment trimmed tree collapsed 0.589 0.196
4255 185 type 1 fimbrae adaptor subunit FimF 1621 1725 2195 4801 5236 172 234 1599 2149 3365 4318 722 B7A alignment trimmed tree collapsed 1.913 0.596
4256 185 type 1 fimbriae anchoring protein FimD 3190 592 1516 1600 4743 655 MS 69-1 alignment trimmed tree collapsed 2.855 0.915
4257 185 chaperone FimC 1620 1726 2194 2198 3191 4796 4802 5237 171 235 1515 1601 2150 3364 3446 4211 4317 4744 4926 1163 B088 alignment trimmed tree collapsed 1.127 1.462
4258 185 type 1 fimbriae major subunit FimA 1725 2195 2196 4795 4933 172 1602 2127 2149 4213 720 042 alignment trimmed tree collapsed 0.005 1.356
4259 185 HipA protein 1603 124 O26:H11 str. 11368 alignment trimmed tree collapsed 0.020 0.593
4260 185 HipA protein 1603 88 FVEC1302 alignment trimmed tree collapsed 0.022 0.907
4261 185 HipB protein 4175 1604 4835 226 UMN026 alignment trimmed tree collapsed 0.000 0.729
4262 185 FIG00637907: hypothetical protein 27 55989 alignment trimmed tree collapsed 0.029 0.108
4263 185 Autoinducer 2 (AI-2) kinase LsrK (EC 2.7.1.-) 1642 1675 2891 240 FVEC1302 alignment trimmed tree collapsed 2.125 0.523
4264 185 LsrR, transcriptional repressor of lsr operon 2890 197 1212A alignment trimmed tree collapsed 0.183 0.655
4265 185 Autoinducer 2 (AI-2) ABC transport system, fused AI2 transporter subunits and ATP-binding component 1461 1645 2530 2615 2889 601 55989 alignment trimmed tree collapsed 2.130 1.188
4266 185 Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrC 2888 97 B7A alignment trimmed tree collapsed 0.010 0.138
4267 185 Autoinducer 2 (AI-2) ABC transport system, membrane channel protein LsrD 2974 5477 211 212 2614 2887 380 MS 21-1 alignment trimmed tree collapsed 1.887 0.301
4268 185 Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB 2886 98 55989 alignment trimmed tree collapsed 0.004 0.151
4269 185 Autoinducer 2 (AI-2) aldolase LsrF (EC 4.2.1.-) 2885 103 B7A alignment trimmed tree collapsed 0.011 0.234
4270 185 Autoinducer 2 (AI-2) modifying protein LsrG 2884 103 O157:H7 str. FRIK966 alignment trimmed tree collapsed 0.000 0.261
4271 185 Trans-aconitate 2-methyltransferase (EC 2.1.1.144) 2883 152 55989 alignment trimmed tree collapsed 0.029 0.479
4272 185 hypothetical protein 2882 126 1827-70 alignment trimmed tree collapsed 0.004 0.621
4273 185 Altronate oxidoreductase (EC 1.1.1.58) 732 44 2881 324 MS 124-1 alignment trimmed tree collapsed 0.000 0.979
4274 185 hypothetical protein 2880 101 IAI1 alignment trimmed tree collapsed 0.022 1.081
4275 185 hypothetical protein 2879 74 TA271 alignment trimmed tree collapsed 0.018 0.831
4276 185 Glutaminase (EC 3.5.1.2) 2878 128 536 alignment trimmed tree collapsed 0.000 0.309
4277 185 Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) 1670 3069 4062 4123 4154 4186 5460 382 2222 2877 3276 3618 3644 3726 4846 962 B171 alignment trimmed tree collapsed 2.266 2.048
4278 185 LysR family transcriptional regulator YneJ 994 2153 2965 3008 3641 5351 618 1333 2190 2605 2646 2876 3526 3575 4133 4889 1335 O26:H11 str. 11368 alignment trimmed tree collapsed 2.663 0.779
4279 185 hypothetical protein 2875 68 MS 115-1 alignment trimmed tree collapsed 0.087 0.340
4280 185 hypothetical protein 2874 48 B171 alignment trimmed tree collapsed 0.026 0.663
4281 185 hypothetical protein 9 H299 alignment trimmed tree collapsed 0.023 0.894
4282 185 Probable sugar efflux transporter 3713 5079 470 1863 2873 390 WV_060327 alignment trimmed tree collapsed 0.000 0.995
4283 185 Multiple antibiotic resistance protein MarC 2018 1748 2872 3378 382 F11 alignment trimmed tree collapsed 0.005 0.695
4284 185 Multiple antibiotic resistance protein MarR 3094 2871 4640 4765 417 O157:H7 str. EC4076 alignment trimmed tree collapsed 2.357 0.704
4285 185 Multiple antibiotic resistance protein MarA 815 1104 1164 1322 1323 1647 2353 2799 3755 4122 1164 1165 2032 2106 2234 2473 2870 3261 3645 3737 3966 4432 1559 str. K-12 substr. DH10B alignment trimmed tree collapsed 2.066 1.055
4286 185 Multiple antibiotic resistance protein MarB 2869 131 MS 84-1 alignment trimmed tree collapsed 0.055 0.310
4287 185 6-phospho-beta-glucosidase (EC 3.2.1.86) 1608 2421 2579 1490 2868 3353 4363 407 O26:H11 str. 11368 alignment trimmed tree collapsed 2.301 0.499
4288 185 Maltoporin (maltose/maltodextrin high-affinity receptor, phage lambda receptor protein) 1607 2867 3352 110 W alignment trimmed tree collapsed 0.699 0.071
4289 185 PTS system, chitobiose-specific IIA component (EC 2.7.1.69) 3800 1223 2866 193 E110019 alignment trimmed tree collapsed 1.116 1.391
4290 185 PTS system, cellobiose-specific IIC component (EC 2.7.1.69) 3801 1224 2865 172 E110019 alignment trimmed tree collapsed 1.377 1.429
4291 185 PTS system, cellobiose-specific IIB component (EC 2.7.1.69) 3802 1225 2864 184 E110019 alignment trimmed tree collapsed 1.493 1.468
4292 185 FIG00639603: hypothetical protein 2863 26 W alignment trimmed tree collapsed 0.000 0.200
4293 185 Transcriptional regulator, GntR family 1147 1282 1943 3182 663 692 1254 1524 2269 2862 660 B088 alignment trimmed tree collapsed 0.000 0.592
4294 185 Permease of the drug/metabolite transporter (DMT) superfamily 3488 1664 2861 239 HS alignment trimmed tree collapsed 0.014 0.363
4295 185 FIG00637973: hypothetical protein 34 O127:H6 str. E2348/69 alignment trimmed tree collapsed 0.022 0.703
4296 185 Putative transport protein 2860 129 E110019 alignment trimmed tree collapsed 0.031 0.161
4297 185 hypothetical protein 2859 127 MS 119-7 alignment trimmed tree collapsed 0.000 1.009
4298 185 Putative periplasmic protein 2365 2246 2858 229 IAI1 alignment trimmed tree collapsed 0.023 1.187
4299 185 C-terminal domain of CinA paralog, YdeJ 3108 254 3788 223 B7A alignment trimmed tree collapsed 1.077 1.201
4300 185 Dipeptidyl carboxypeptidase Dcp (EC 3.4.15.5) 2123 3789 4123 252 55989 alignment trimmed tree collapsed 0.008 1.327
4301 185 3-hydroxypropionate dehydrogenase (EC 1.1.1.298) 3790 173 APEC O1 alignment trimmed tree collapsed 0.005 0.548
4302 185 Transcriptional regulator, GntR family 734 1582 46 1825 1926 3678 3791 571 O157:H7 str. EC4113 alignment trimmed tree collapsed 2.290 0.440
4303 185 putative cytoplasmic protein 3792 133 O83:H1 str. NRG 857C alignment trimmed tree 0.000 0.000
4304 185 Putative D-mannonate oxidoreductase (EC 1.1.1.57) 732 3253 522 3793 403 55989 alignment trimmed tree collapsed 0.753 0.193
4305 185 Putative transport protein 1155 3750 3794 258 CFT073 alignment trimmed tree collapsed 1.786 0.326
4306 186 Phage tail fiber protein 314 4874 147 E24377A alignment trimmed tree collapsed 0.464 0.405
4307 187 hypothetical protein 3516 3 M718 alignment trimmed tree collapsed 0.000 0.707
4308 188 Attachment invasion locus protein precursor 37 4870 608 4596 514 2362-75 alignment trimmed tree collapsed 0.095 0.291
4309 188 Attachment invasion locus protein precursor 37 46 4641 4870 4924 608 3704 4596 691 UMN026 alignment trimmed tree collapsed 0.140 0.335
4310 188 Phage tail fiber protein 4642 341 IHE3034 alignment trimmed tree collapsed 0.142 0.297
4311 189 Phage minor tail protein 4862 3414 3599 230 UM146 alignment trimmed tree collapsed 0.798 1.429
4312 189 Phage minor tail protein 4863 3413 3600 4814 253 O157:H7 str. EC869 alignment trimmed tree collapsed 0.227 0.166
4313 189 Phage tail length tape-measure protein 1 110 4864 229 55989 alignment trimmed tree collapsed 0.370 5.738
4314 190 Phage terminase, large subunit 4848 3425 214 MS 145-7 alignment trimmed tree collapsed 0.399 0.116
4315 190 Putative DNA packaging protein of prophage; terminase large subunit 3425 271 MS 145-7 alignment trimmed tree collapsed 0.035 0.257
4316 190 Phage terminase, large subunit 3425 270 TA280 alignment trimmed tree collapsed 0.006 0.343
4317 190 Phage head-to-tail joining protein 4851 3424 275 O55:H7 str. CB9615 alignment trimmed tree collapsed 0.838 0.191
4318 190 Phage portal protein 3423 4188 263 APEC O1 alignment trimmed tree collapsed 0.033 0.159
4319 190 Head-tail preconnector protein GP5 4854 3422 234 O157:H7 str. EC4113 alignment trimmed tree collapsed 0.007 0.768
4320 190 Head-tail preconnector protein GP5 127 MS 69-1 alignment trimmed tree collapsed 0.018 0.012
4321 190 putative head decoration protein 4855 460 3421 304 UM146 alignment trimmed tree collapsed 0.042 0.419
4322 190 Phage major capsid protein 4856 3420 244 042 alignment trimmed tree collapsed 1.381 0.049
4323 190 Phage DNA-packaging protein 324 174 042 alignment trimmed tree collapsed 2.496 0.900
4324 190 putative structure; Structural component Phage or Prophage Related 4858 3418 200 55989 alignment trimmed tree collapsed 0.448 0.129
4325 190 Minor tail protein Z 4859 3417 303 042 alignment trimmed tree collapsed 1.083 0.027
4326 190 Phage minor tail protein 4860 3416 321 UM146 alignment trimmed tree collapsed 0.253 0.955
4327 190 Putative tail component of prophage CP-933K 4861 3415 312 FVEC1412 alignment trimmed tree collapsed 0.011 0.417
4328 190 Putative tail component of prophage CP-933K 4861 3415 4529 378 B171 alignment trimmed tree collapsed 0.304 0.656
4329 190 hypothetical protein 2 O157:H7 str. EC508 alignment trimmed
4330 191 Terminase small subunit 300 4847 3426 4339 332 S88 alignment trimmed tree collapsed 1.575 1.696
4331 192 Phage endopeptidase 30 192 4654 4843 4184 4799 551 55989 alignment trimmed tree collapsed 0.860 1.426
4332 193 hypothetical protein 52 327 359 4647 2116 2754 366 55989 alignment trimmed tree collapsed 1.203 0.674
4333 193 Phage lysis protein S 26 4648 4841 911 580 CFT073 alignment trimmed tree collapsed 0.080 0.264
4334 194 hypothetical protein 6 MS 116-1 alignment trimmed tree collapsed 0.356 0.783
4335 195 Primosomal protein I 273 954 153 MS 84-1 alignment trimmed tree collapsed 0.611 0.476
4336 196 Sensory box/GGDEF domain protein 3031 3147 3484 3855 3856 3865 4047 4108 4236 4238 4274 4297 4678 5068 943 1331 1667 2692 2859 2880 2959 3484 3773 4091 4820 4828 4829 1919 E110019 alignment trimmed tree collapsed 0.007 0.876
4337 196 COG2801: Transposase and inactivated derivatives 3497 3483 1072 53638 alignment trimmed tree collapsed 2.090 0.876
4338 196 IS, phage, Tn; Transposon-related functions 209 ATCC 8739 alignment trimmed tree collapsed 0.208 0.216
4339 196 Uncharacterized protein YmdE 43 B171 alignment trimmed tree collapsed 0.029 3.793
4340 196 Uncharacterized protein YcdU 4532 71 E110019 alignment trimmed tree collapsed 0.012 0.677
4341 196 Uncharacterized protein YcdU 4532 71 W alignment trimmed tree collapsed 0.033 1.848
4342 196 hypothetical protein 1
4343 196 Glyoxylate reductase (EC 1.1.1.79) / Glyoxylate reductase (EC 1.1.1.26) / Hydroxypyruvate reductase (EC 1.1.1.81); 2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) (EC 1.1.1.-) 2489 126 55989 alignment trimmed tree collapsed 0.007 0.285
4344 196 Putative hydrolase YcdX (EC 3.1.-.-) 2490 133 WV_060327 alignment trimmed tree collapsed 0.000 0.352
4345 196 Putative oxidoreductase component of anaerobic dehydrogenases; Functional role page for Chaperone protein TorD 3637 2491 3522 262 E22 alignment trimmed tree collapsed 1.673 0.316
4346 196 hypothetical protein 2492 99 B171 alignment trimmed tree collapsed 0.027 0.904
4347 196 Inner membrane protein YcdZ 5466 201 2493 227 E110019 alignment trimmed tree collapsed 0.007 0.899
4348 196 Curli production assembly/transport component CsgG 2494 131 O157:H7 EDL933 alignment trimmed tree collapsed 0.000 0.403
4349 196 Curli production assembly/transport component CsgF 2495 129 TA143 alignment trimmed tree collapsed 0.000 0.477
4350 196 Curli production assembly/transport component CsgE 2496 131 ED1a alignment trimmed tree collapsed 0.000 0.088
4351 196 Transcriptional regulator CsgD for 2nd curli operon 2497 108 O157:H7 str. EC4113 alignment trimmed tree collapsed 0.000 0.494
4352 196 hypothetical protein 2498 114 042 alignment trimmed tree 0.000 0.000
4353 196 FIG00644396: hypothetical protein 11 MS 84-1 alignment trimmed tree collapsed 0.000 0.835
4354 196 Minor curlin subunit CsgB, nucleation component of curlin monomers 123 MS 196-1 alignment trimmed tree collapsed 0.012 0.139
4355 196 Major curlin subunit precursor CsgA 429 134 B171 alignment trimmed tree collapsed 0.000 0.438
4356 196 Putative curli production protein CsgC 428 124 B088 alignment trimmed tree collapsed 0.035 0.295
4357 196 FIG00639217: hypothetical protein 7 55989 alignment trimmed tree collapsed 0.029 0.147
4358 196 Uncharacterized protein ymdA precursor 427 133 UTI89 alignment trimmed tree collapsed 0.019 0.893
4359 196 COG2110, Macro domain, possibly ADP-ribose binding module 426 130 MS 182-1 alignment trimmed tree collapsed 0.006 0.629
4360 196 Cardiolipin synthetase (EC 2.7.8.-) 425 132 TA280 alignment trimmed tree collapsed 0.007 0.862
4361 196 Glucans biosynthesis protein C (EC 2.1.-.-) 424 131 SE11 alignment trimmed tree collapsed 0.000 1.148
4362 196 hypothetical protein 423 130 KO11 alignment trimmed tree collapsed 0.075 0.394
4363 196 hypothetical protein 85 MS 107-1 alignment trimmed tree collapsed 0.023 0.612
4364 196 Glucans biosynthesis protein G precursor 422 3611 259 MS 182-1 alignment trimmed tree collapsed 0.000 0.994
4365 196 Glucans biosynthesis glucosyltransferase H (EC 2.4.1.-) 126 53638 alignment trimmed tree collapsed 0.007 0.765
4366 196 FIG00640928: hypothetical protein 47 M718 alignment trimmed tree collapsed 0.152 0.652
4367 196 Putative outer membrane lipoprotein 1619 154 MS 124-1 alignment trimmed tree collapsed 0.033 0.419
4368 196 Acidic protein msyB 1620 133 042 alignment trimmed tree collapsed 0.000 0.678
4369 196 Multidrug-efflux transporter, major facilitator superfamily (MFS) (TC 2.A.1) 1621 186 MS 175-1 alignment trimmed tree collapsed 0.000 0.632
4370 196 Multidrug-efflux transporter, major facilitator superfamily (MFS) (TC 2.A.1) 1621 99 MS 175-1 alignment trimmed tree collapsed 0.043 0.292
4371 196 lipid A biosynthesis lauroyl acyltransferase 2793 278 1622 2385 2974 431 APEC O1 alignment trimmed tree collapsed 2.039 0.965
4372 196 Rhodanese-related sulfurtransferases 1623 132 M718 alignment trimmed tree collapsed 0.003 1.211
4373 196 Protein yceI precursor 1624 134 536 alignment trimmed tree collapsed 0.017 1.194
4374 196 Protein yceI precursor 1624 133 BL21(DE3) alignment trimmed tree collapsed 0.017 0.269
4375 196 Cytochrome B561 1625 160 str. K-12 substr. DH10B alignment trimmed tree collapsed 0.006 0.815
4376 196 hypothetical protein 1626 96 MS 145-7 alignment trimmed tree collapsed 0.021 0.325
4377 196 hypothetical protein 1627 127 KO11 alignment trimmed tree collapsed 0.000 0.256
4378 196 N-methyl-L-tryptophan oxidase (EC 1.5.3.-) 1628 132 MS 182-1 alignment trimmed tree collapsed 0.012 0.939
4379 196 Putative cytoplasmic protein 1629 132 O157:H7 str. EC4115 alignment trimmed tree collapsed 0.000 0.687
4380 196 DNA-damage-inducible protein I 362 1630 3997 4265 358 CFT073 alignment trimmed tree collapsed 0.000 0.522
4381 196 Dihydroorotase (EC 3.5.2.3) 26 MS 119-7 alignment trimmed tree collapsed 0.006 0.355
4382 196 Putative lipoprotein yceB precursor 1632 132 APEC O1 alignment trimmed tree collapsed 0.000 0.520
4383 196 Glutaredoxin 2 1633 129 53638 alignment trimmed tree collapsed 0.005 0.377
4384 196 MFS superfamily export protein YceL 1634 135 55989 alignment trimmed tree collapsed 0.003 0.169
4385 196 Ribosomal-protein-S5p-alanine acetyltransferase 1635 130 MS 182-1 alignment trimmed tree collapsed 0.006 0.534
4386 196 Protein of unknown function YceH 1636 134 1827-70 alignment trimmed tree collapsed 0.005 0.868
4387 196 Virulence factor MviM 1637 132 O111:H- str. 11128 alignment trimmed tree collapsed 0.010 0.152
4388 196 Proposed peptidoglycan lipid II flippase MurJ 1638 132 E2348/69 alignment trimmed tree collapsed 0.000 0.443
4389 196 Flagellar biosynthesis protein FlgN 1639 131 55989 alignment trimmed tree collapsed 0.014 0.659
4390 196 Negative regulator of flagellin synthesis FlgM 1640 135 E110019 alignment trimmed tree collapsed 0.000 0.159
4391 196 Flagellar basal-body P-ring formation protein FlgA 1641 131 IHE3034 alignment trimmed tree collapsed 0.000 0.935
4392 196 hypothetical protein 1642 59 MS 124-1 alignment trimmed tree collapsed 0.180 0.714
4393 196 Flagellar basal-body rod protein FlgB 1643 153 SE11 alignment trimmed tree collapsed 0.000 0.401
4394 196 Flagellar basal-body rod protein FlgC 1644 171 S88 alignment trimmed tree collapsed 1.359 0.501
4395 196 Flagellar basal-body rod modification protein FlgD 1645 128 MS 116-1 alignment trimmed tree collapsed 0.004 0.238
4396 196 Flagellar hook protein FlgE 1645 154 MS 187-1 alignment trimmed tree collapsed 0.012 0.446
4397 196 Flagellar basal-body rod protein FlgF 4396 4398 1645 1646 1647 341 OP50 alignment trimmed tree collapsed 1.923 0.654
4398 196 Flagellar basal-body rod protein FlgG 4397 1646 1647 278 UMN026 alignment trimmed tree collapsed 0.001 0.974
4399 196 Flagellar L-ring protein FlgH 1648 126 MS 107-1 alignment trimmed tree collapsed 0.000 0.204
4400 196 Flagellar P-ring protein FlgI 1649 154 HS alignment trimmed tree collapsed 0.003 0.438
4401 196 Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-) 1
4402 196 Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-) 1326 133 83972 alignment trimmed tree collapsed 0.027 2.484
4403 196 Flagellar hook-associated protein FlgK 1325 125 55989 alignment trimmed tree collapsed 0.014 0.376
4404 196 Flagellar hook-associated protein FlgL 1324 147 KO11 alignment trimmed tree collapsed 0.027 0.360
4405 196 Ribonuclease E (EC 3.1.26.12) 1323 131 55989 alignment trimmed tree collapsed 0.017 0.117
4406 196 FIG00640449: hypothetical protein 1322 43 MS 45-1 alignment trimmed tree 0.000 0.000
4407 196 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) ## LSU Psi955, Psi2504 and Psi2580 2 O157:H7 str. EC4076 alignment trimmed
4408 196 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) ## LSU Psi955, Psi2504 and Psi2580 1321 250 MS 107-1 alignment trimmed tree collapsed 0.008 1.176
4409 196 hypothetical protein 1320 24 2362-75 alignment trimmed tree collapsed 0.000 0.244
4410 196 FIG146278: Maf/YceF/YhdE family protein 1831 1319 2370 248 S88 alignment trimmed tree collapsed 0.000 1.055
4411 196 COG1399 protein, clustered with ribosomal protein L32p 1318 99 TA271 alignment trimmed tree collapsed 0.000 0.341
4412 196 LSU ribosomal protein L32p 1317 119 O157:H7 str. EC4486 alignment trimmed tree collapsed 0.000 0.161
4413 196 Phosphate:acyl-ACP acyltransferase PlsX 1316 112 O157:H7 EDL933 alignment trimmed tree collapsed 0.004 1.738
4414 196 3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (EC 2.3.1.41) 1315 123 MS 182-1 alignment trimmed tree collapsed 0.003 0.337
4415 196 Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39) 1314 127 E24377A alignment trimmed tree collapsed 0.004 0.375
4416 196 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) 3668 153 SE15 alignment trimmed tree collapsed 2.877 2.451
4417 196 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) 953 972 2348 2422 2567 2654 2739 2841 3212 3668 5287 82 412 1200 1313 1489 1793 2014 3550 4463 4594 4678 1720 O157:H7 str. EC4206 alignment trimmed tree collapsed 1.685 1.322
4418 196 Acyl carrier protein 1312 116 ATCC 8739 alignment trimmed tree collapsed 0.000 0.093
4419 196 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.41) 1311 3124 367 MS 45-1 alignment trimmed tree collapsed 1.180 0.615
4420 196 Aminodeoxychorismate lyase (EC 4.1.3.38) 1310 120 55989 alignment trimmed tree collapsed 0.011 1.576
4421 196 FIG004453: protein YceG like 1309 114 O127:H6 str. E2348/69 alignment trimmed tree collapsed 0.013 0.402
4422 196 Thymidylate kinase (EC 2.7.4.9) 1308 119 1827-70 alignment trimmed tree collapsed 0.005 0.840
4423 196 DNA polymerase III delta prime subunit (EC 2.7.7.7) 1307 114 E24377A alignment trimmed tree collapsed 0.019 0.625
4424 196 Putative deoxyribonuclease YcfH 2 O157:H7 str. EC4042 alignment trimmed
4425 196 Putative deoxyribonuclease YcfH 1306 131 APEC O1 alignment trimmed tree collapsed 0.000 0.178
4426 196 PTS system, glucose-specific IIB component (EC 2.7.1.69) / PTS system, glucose-specific IIC component (EC 2.7.1.69) 3670 5026 691 1305 3722 3941 4023 531 536A alignment trimmed tree collapsed 0.000 1.098
4427 196 Putative OMR family iron-siderophore receptor precursor 5717 1304 2081 249 55989 alignment trimmed tree collapsed 2.290 0.587
4428 196 hypothetical protein 121 55989 alignment trimmed tree collapsed 0.000 0.102
4429 196 YcfF/hinT protein: a purine nucleoside phosphoramidase 1303 133 IAI1 alignment trimmed tree collapsed 0.000 0.607
4430 196 YcfL protein: an outer membrane lipoprotein that is part of a salvage cluster 1302 133 CFT073 alignment trimmed tree collapsed 0.025 0.508
4431 196 Lipoprotein YcfM, part of a salvage pathway of unknown substrate 1301 130 TA206 alignment trimmed tree collapsed 0.000 0.273
4432 196 Thiamine kinase (EC 2.7.1.89) @ Adenosylcobinamide kinase (EC 2.7.1.156) 1300 126 IAI1 alignment trimmed tree collapsed 0.013 0.191
4433 196 Beta N-acetyl-glucosaminidase (EC 3.2.1.52) 132 SE11 alignment trimmed tree collapsed 0.009 0.653
4434 196 YcfP protein: probably an esterase that is part of a salvage cluster 1298 130 E2348/69 alignment trimmed tree collapsed 0.000 0.376
4435 196 NADH dehydrogenase (EC 1.6.99.3) 133 IAI1 alignment trimmed tree collapsed 0.003 1.064
4436 196 Putative exported protein 457 134 042 alignment trimmed tree collapsed 0.006 0.721
4437 196 Transcriptional regulator, TetR family 456 22 E110019 alignment trimmed tree collapsed 0.014 1.114
4438 196 Putative outer membrane protein 1822 4911 4916 5483 216 455 1831 2361 4927 664 H736 alignment trimmed tree collapsed 0.943 0.488
4439 196 L,D-transpeptidase YcfS 3537 3735 4930 454 2163 3709 3885 518 1827-70 alignment trimmed tree collapsed 1.120 0.397
4440 196 L,D-transpeptidase YcfS 3537 3735 4930 454 3709 3885 521 K12 alignment trimmed tree collapsed 0.000 0.669
4441 196 Transcription-repair coupling factor 453 128 IAI1 alignment trimmed tree collapsed 0.000 1.090
4442 196 hypothetical protein 452 125 B7A alignment trimmed tree collapsed 0.000 0.971
4443 196 Lipoprotein releasing system transmembrane protein LolC 4445 449 451 253 APEC O1 alignment trimmed tree collapsed 0.000 1.009
4444 196 Lipoprotein releasing system ATP-binding protein LolD 1142 1150 1857 2032 2048 2065 2183 2184 2457 2837 3387 3448 4052 4082 4183 4701 4726 5194 4 92 450 623 1438 1873 1890 1905 2273 2517 2929 3003 3106 3242 3286 3654 3655 3838 4573 4843 2608 O103:H2 str. 12009 alignment trimmed tree collapsed 2.853 0.612
4445 196 Lipoprotein releasing system transmembrane protein LolE 4443 449 451 259 MS 124-1 alignment trimmed tree collapsed 0.009 1.017
4446 196 Latent glucokinase ycfX 5077 448 472 362 IAI1 alignment trimmed tree collapsed 1.590 0.557
4447 196 NAD-dependent protein deacetylase of SIR2 family 447 133 O157:H7 str. EC4113 alignment trimmed tree collapsed 0.000 0.603
4448 196 putative factor 95 MS 182-1 alignment trimmed tree collapsed 0.129 0.617
4449 196 FIG00639095: hypothetical protein 1714 92 O111:H- str. 11128 alignment trimmed tree collapsed 0.000 1.192
4450 196 ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) 1713 134 O111:H- str. 11128 alignment trimmed tree collapsed 0.003 0.761
4451 196 Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) 4185 4703 1712 3840 4845 392 APEC O1 alignment trimmed tree collapsed 1.046 0.585
4452 196 Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) 4184 1711 4844 252 M605 alignment trimmed tree collapsed 0.008 1.017
4453 196 Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) 4183 1710 4843 258 E2348/69 alignment trimmed tree collapsed 0.000 1.014
4454 196 FIG00639904: hypothetical protein 47 UMN026 alignment trimmed tree collapsed 0.000 0.395
4455 196 Tripeptide aminopeptidase (EC 3.4.11.4) 1709 73 TA271 alignment trimmed tree collapsed 0.003 0.236
4456 196 FIG002776: hypothetical protein 1708 130 M718 alignment trimmed tree collapsed 0.000 0.770
4457 196 Sensor protein PhoQ (EC 2.7.13.3) 1707 131 NC101 alignment trimmed tree collapsed 0.005 1.009
4458 196 Transcriptional regulatory protein PhoP 817 820 1159 1980 2084 2102 3161 3503 3655 5040 5082 5259 265 467 1455 1706 1775 2034 2037 2248 2332 2397 3308 3432 3539 3583 3748 1793 O157:H7 str. Sakai alignment trimmed tree collapsed 2.348 0.786
4459 196 Adenylosuccinate lyase (EC 4.3.2.2) 1705 132 O157:H7 str. EC4196 alignment trimmed tree collapsed 0.000 0.482
4460 196 FIG002903: a protein of unknown function perhaps involved in purine metabolism 1704 130 TA143 alignment trimmed tree collapsed 0.005 0.956
4461 196 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) 1703 131 B171 alignment trimmed tree collapsed 0.010 0.780
4462 196 Nudix-like NDP and NTP phosphohydrolase YmfB 1702 134 55989 alignment trimmed tree collapsed 0.007 1.036
4463 196 COG1187: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 1050 3266 4024 533 1701 1985 2947 527 O26:H11 str. 11368 alignment trimmed tree collapsed 1.974 0.722
4464 196 hypothetical protein 1700 30 E2348/69 alignment trimmed tree collapsed 0.000 0.508
4465 196 Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) 1699 131 55989 alignment trimmed tree collapsed 0.005 0.674
4466 196 hypothetical protein 1418 177 TA271 alignment trimmed tree collapsed 0.000 0.824
4467 196 Putative HTH-type transcriptional regulator ycgE 3201 1419 4474 194 str. K-12 substr. DH10B alignment trimmed tree collapsed 0.000 0.945
4468 196 Hypothetical protein ycgF 1420 98 B088 alignment trimmed tree collapsed 0.016 1.127
4469 196 hypothetical protein 1742 99 M605 alignment trimmed tree collapsed 0.000 1.354
4470 196 hypothetical protein 1741 94 O127:H6 str. E2348/69 alignment trimmed tree collapsed 0.000 0.578
4471 196 hypothetical protein 1739 4 MS 116-1 alignment trimmed tree collapsed 0.055 0.577
4472 196 Rtn protein 1738 82 MS 116-1 alignment trimmed tree collapsed 0.012 0.139
4473 196 hypothetical protein 1737 104 E2348/69 alignment trimmed tree collapsed 0.014 0.393
4474 196 FIG00642784: hypothetical protein 18 W alignment trimmed tree collapsed 0.000 0.370
4475 196 FIG00638885: hypothetical protein 1736 64 55989 alignment trimmed tree collapsed 0.025 0.837
4476 196 hypothetical protein 1735 95 E22 alignment trimmed tree collapsed 0.014 1.122
4477 196 IS1 orfA 106 276 651 728 2110 2318 3196 3500 3908 4979 5065 5199 4747 4813 779 B7A alignment trimmed tree collapsed 0.114 0.033
4478 196 Insertion element IS1 protein insB 105 655 727 1679 2111 2317 2676 3197 3909 4596 4640 4980 5064 5201 931 B171 alignment trimmed tree collapsed 0.001 0.423
4479 196 hypothetical protein 4 W alignment trimmed tree collapsed 0.000 0.577
4480 196 AidA-I adhesin-like protein 3313 574 1734 144 55989 alignment trimmed tree collapsed 1.844 1.013
4481 196 hypothetical protein 1733 106 F11 alignment trimmed tree collapsed 0.000 0.304
4482 196 hypothetical protein 1732 104 MS 145-7 alignment trimmed tree collapsed 0.000 0.288
4483 196 hypothetical protein 3061 1000 1275 148 O111:H- str. 11128 alignment trimmed tree collapsed 0.000 0.397
4484 196 Pertactin precursor 539 1001 263 B088 alignment trimmed tree collapsed 0.045 0.547
4485 196 Cell division topological specificity factor MinE 1002 131 SMS-3-5 alignment trimmed tree 0.000 0.000
4486 196 Septum site-determining protein MinD 1003 127 O157:H7 str. Sakai alignment trimmed tree collapsed 0.000 0.156
4487 196 Septum site-determining protein MinC 1004 126 101-1 alignment trimmed tree collapsed 0.004 0.742
4488 196 orf, hypothetical protein 126 130 B171 alignment trimmed tree collapsed 0.042 0.605
4489 196 Protein ycgK precursor 127 130 HS alignment trimmed tree collapsed 0.014 5.629
4490 196 Protein YcgL 128 113 MS 145-7 alignment trimmed tree collapsed 0.011 0.684
4491 196 FIG094199: Fumarylacetoacetate hydrolase 129 161 55989 alignment trimmed tree collapsed 0.009 0.498
4492 196 YcgN (Fragment) 130 10 55989 alignment trimmed tree collapsed 0.000 0.500
4493 196 Hemolysin E, chromosomal 131 122 O26:H11 str. 11368 alignment trimmed tree collapsed 0.079 0.622
4494 196 Hemolysin E, chromosomal 131 98 H591 alignment trimmed tree collapsed 0.058 0.897
4495 196 Hemolysin E, chromosomal 34 MS 124-1 alignment trimmed tree collapsed 0.000 0.428
4496 196 Error-prone repair protein UmuD 177 132 4228 167 536 alignment trimmed tree collapsed 0.008 0.538
4497 196 Error-prone, lesion bypass DNA polymerase V (UmuC) 178 5546 133 1379 290 O111:H- str. 11128 alignment trimmed tree collapsed 1.958 0.866
4498 196 Error-prone, lesion bypass DNA polymerase V (UmuC) 133 151 E24377A alignment trimmed tree collapsed 0.037 0.440
4499 196 Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation 134 129 MS 124-1 alignment trimmed tree collapsed 0.007 0.714
4500 196 Na+/H+ antiporter NhaB 135 127 MS 21-1 alignment trimmed tree collapsed 0.006 0.286
4501 196 Transcriptional regulator for fatty acid degradation FadR, GntR family 136 130 1212A alignment trimmed tree collapsed 0.000 0.125
4502 196 FIG004684: SpoVR-like protein 137 121 MS 146-1 alignment trimmed tree collapsed 0.000 0.301
4503 196 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 138 127 FVEC1412 alignment trimmed tree collapsed 0.003 0.575
4504 196 Alanine racemase, catabolic (EC 5.1.1.1) 1093 139 3318 264 SE11 alignment trimmed tree collapsed 0.006 0.199
4505 196 hypothetical protein 140 45 MS 84-1 alignment trimmed tree collapsed 0.000 0.291
4506 196 Cell volume regulation protein A 3991 116 O127:H6 str. E2348/69 alignment trimmed tree collapsed 0.000 0.553
4507 196 Muramoyltetrapeptide carboxypeptidase (EC 3.4.17.13) 3990 132 O26:H11 str. 11368 alignment trimmed tree collapsed 0.017 0.448
4508 196 Membrane-bound lytic murein transglycosylase E (EC 3.2.1.-) 3989 129 55989 alignment trimmed tree collapsed 0.000 0.843
4509 196 Inner membrane protein 3988 109 55989 alignment trimmed tree collapsed 0.046 0.005
4510 196 Transglycosylase associated protein 3867 3987 4818 250 str. K-12 substr. DH10B alignment trimmed tree collapsed 0.026 1.530
4511 196 hypothetical protein 58 B088 alignment trimmed tree collapsed 0.000 0.541
4512 196 Trehalase (EC 3.2.1.28); Periplasmic trehalase precursor (EC 3.2.1.28) 3984 102 MS 175-1 alignment trimmed tree collapsed 0.021 1.047
4513 196 Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), subunit DhaM; DHA-specific IIA component / DHA-specific phosphocarrier protein HPr / DHA-specific EI component 3982 126 B7A alignment trimmed tree collapsed 0.013 0.262
4514 196 Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), ADP-binding subunit DhaL 3981 129 MS 78-1 alignment trimmed tree collapsed 0.033 0.317
4515 196 Phosphoenolpyruvate-dihydroxyacetone phosphotransferase (EC 2.7.1.121), dihydroxyacetone binding subunit DhaK 3980 131 55989 alignment trimmed tree collapsed 0.007 0.329
4516 196 Phosphoenolpyruvate-dihydroxyacetone phosphotransferase operon regulatory protein DhaR 85 MS 78-1 alignment trimmed tree collapsed 1.438 0.410
4517 196 Putative adhesion and penetration protein 1682 119 EC4100B alignment trimmed tree collapsed 2.667 0.721
4518 196 Putative adhesion and penetration protein 1682 94 B088 alignment trimmed tree collapsed 0.041 0.963
4519 196 hypothetical protein 1681 36 55989 alignment trimmed tree collapsed 0.017 0.044
4520 196 GTP-binding and nucleic acid-binding protein YchF 1680 134 HS alignment trimmed tree collapsed 0.000 0.594
4521 196 Peptidyl-tRNA hydrolase (EC 3.1.1.29) 1679 129 SE15 alignment trimmed tree collapsed 0.000 0.214
4522 196 probable membrane protein YPO2012 4739 134 O157:H7 alignment trimmed tree 0.000 0.000
4523 196 Putative sulfate permease 4738 129 SE11 alignment trimmed tree collapsed 0.005 0.609
4524 196 Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) 4737 133 83972 alignment trimmed tree collapsed 0.004 0.596
4525 196 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) 4736 126 55989 alignment trimmed tree collapsed 0.012 1.081
4526 196 Outer membrane lipoprotein LolB precursor 4735 127 E2348/69 alignment trimmed tree collapsed 0.000 0.518
4527 196 Glutamyl-tRNA reductase (EC 1.2.1.70) 4734 125 042 alignment trimmed tree collapsed 0.000 0.462
4528 196 Peptide chain release factor 1 4733 144 E2348/69 alignment trimmed tree collapsed 0.000 0.354
4529 196 Methylase of polypeptide chain release factors 4732 133 EC4100B alignment trimmed tree collapsed 0.047 1.700
4530 196 FIG002082: Protein sirB2 4731 127 MS 69-1 alignment trimmed tree collapsed 0.024 0.857
4531 196 FIG002708: Protein SirB1 4730 134 O157:H7 str. EC4206 alignment trimmed tree collapsed 0.000 0.512
4532 196 2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55) 4729 131 ED1a alignment trimmed tree collapsed 0.000 0.530
4533 196 hypothetical protein 277 2175 2177 2178 4534 4398 467 O103:H2 str. 12009 alignment trimmed tree collapsed 0.096 1.982
4534 196 hypothetical protein 277 2175 2177 2178 4533 4398 467 042 alignment trimmed tree collapsed 0.000 1.576
4535 196 Calcium/proton antiporter 1019 132 B088 alignment trimmed tree collapsed 0.000 0.483
4536 196 Cation transport regulator chaB 1020 131 NC101 alignment trimmed tree collapsed 0.013 0.505
4537 196 Cation transport protein chaC 1021 126 55989 alignment trimmed tree collapsed 0.014 0.107
4538 196 Putative ACR protein 1022 131 H736 alignment trimmed tree collapsed 0.000 0.782
4539 196 Putative invasin 1023 121 O157:H7 str. TW14359 alignment trimmed tree collapsed 0.005 0.144
4540 196 Nitrate/nitrite response regulator protein 1159 1278 1553 1980 2102 2152 2783 3161 3303 3445 3503 5242 239 265 540 566 619 659 675 1024 1455 2248 2394 2397 3432 3748 1852 O111:H- str. 11128 alignment trimmed tree collapsed 2.160 1.114
4541 196 Nitrate/nitrite sensor protein (EC 2.7.3.-) 2880 1025 4415 260 O157:H7 str. EC4501 alignment trimmed tree collapsed 1.290 1.030
4542 196 hypothetical protein 1026 127 MS 107-1 alignment trimmed tree collapsed 0.029 0.358
4543 196 Nitrate/nitrite transporter 4213 1027 254 1827-70 alignment trimmed tree collapsed 0.003 0.376
4544 196 Respiratory nitrate reductase alpha chain (EC 1.7.99.4) 4212 1028 251 O157:H7 str. EC869 alignment trimmed tree collapsed 0.002 0.808
4545 196 Respiratory nitrate reductase beta chain (EC 1.7.99.4) 4211 1029 3348 264 O157:H7 str. EC4024 alignment trimmed tree collapsed 0.261 1.243
4546 196 Respiratory nitrate reductase delta chain (EC 1.7.99.4) 4210 1030 3347 260 B088 alignment trimmed tree collapsed 0.681 1.616
4547 196 Respiratory nitrate reductase gamma chain (EC 1.7.99.4) 4209 1031 259 O157:H7 str. TW14359 alignment trimmed tree collapsed 0.000 0.838
4548 196 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 3366 132 MS 115-1 alignment trimmed tree collapsed 0.000 0.722
4549 196 hypothetical protein 3367 129 E22 alignment trimmed tree collapsed 0.052 0.727
4550 196 hypothetical protein 3368 132 K12 alignment trimmed tree collapsed 0.004 0.403
4551 196 Hnr protein 130 F11 alignment trimmed tree collapsed 0.003 0.615
4552 196 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) 3115 2857 3370 241 UTI89 alignment trimmed tree collapsed 1.882 0.614
4553 196 DNA-binding protein H-NS 3077 3300 3371 291 TA143 alignment trimmed tree collapsed 0.595 0.284
4554 196 Thymidine kinase (EC 2.7.1.21) 3372 130 1044A alignment trimmed tree collapsed 0.006 0.913
4555 196 Transposase 15 1827-70 alignment trimmed tree collapsed 0.274 0.198
4556 196 Transposase 3374 50 O26:H11 str. 11368 alignment trimmed tree collapsed 0.000 0.272
4557 196 hypothetical protein 3375 31 O55:H7 str. CB9615 alignment trimmed tree collapsed 0.000 0.378
4558 196 Uncharacterized protein ychG 3376 41 MS 145-7 alignment trimmed tree collapsed 0.000 0.314
4559 196 Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) 3377 131 IAI39 alignment trimmed tree collapsed 0.000 0.539
4560 196 Putative membrane protein 3378 130 KO11 alignment trimmed tree collapsed 0.000 0.086
4561 196 Putative membrane protein 3378 134 str. K-12 substr. DH10B alignment trimmed tree collapsed 0.000 0.043
4562 196 hypothetical protein 3379 112 BL21 alignment trimmed tree collapsed 0.023 1.768
4563 196 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) 3380 126 MS 115-1 alignment trimmed tree collapsed 0.006 0.072
4564 196 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) 2062 2186 3260 4055 4233 528 1876 2695 3283 3381 3657 3776 834 IAI1 alignment trimmed tree collapsed 1.578 0.299
4565 196 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) 3382 133 MS 116-1 alignment trimmed tree collapsed 0.000 0.567
4566 196 Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1) 2184 4053 4230 4231 4567 2697 2698 3285 3383 3384 3655 732 W alignment trimmed tree collapsed 1.373 1.191
4567 196 Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1) 2183 2184 4053 4566 4672 3285 3383 3384 3654 3655 3778 786 MS 45-1 alignment trimmed tree collapsed 0.000 0.990
4568 196 FIG002901: hypothetical protein co-occurring with Cardiolipin synthetase 3385 133 CFT073 alignment trimmed tree collapsed 0.000 0.237
4569 196 Cardiolipin synthetase (EC 2.7.8.-) 3386 129 NC101 alignment trimmed tree collapsed 0.004 0.092
4570 196 Putative potassium channel protein 3387 127 B185 alignment trimmed tree collapsed 0.003 1.029
4571 196 YciL protein 3388 134 53638 alignment trimmed tree collapsed 0.000 0.434
4572 196 Ferric siderophore transport system, periplasmic binding protein TonB 3389 126 MS 182-1 alignment trimmed tree collapsed 0.009 0.871
4573 196 Acyl-CoA thioesterase YciA, involved in membrane biogenesis 3390 128 APEC O1 alignment trimmed tree collapsed 0.000 0.641
4574 196 Intracellular septation protein IspA 3391 130 E110019 alignment trimmed tree collapsed 0.000 0.619
4575 196 Membrane protein YciC, linked to IspA 3392 129 IAI1 alignment trimmed tree collapsed 0.009 1.006
4576 196 Outer membrane protein W precursor 3393 126 042 alignment trimmed tree collapsed 0.049 0.133
4577 196 Integrase 3394 4258 237 1044A alignment trimmed tree collapsed 0.008 0.713
4578 197 Uptake hydrogenase small subunit precursor (EC 1.12.99.6) 3254 130 M605 alignment trimmed tree collapsed 0.000 0.745
4579 197 Uptake hydrogenase large subunit (EC 1.12.99.6) 2339 598 3253 263 TA271 alignment trimmed tree collapsed 0.000 0.390
4580 197 Ni,Fe-hydrogenase I cytochrome b subunit 3252 125 O157:H7 EDL933 alignment trimmed tree collapsed 0.000 0.699
4581 197 Hydrogenase maturation protease (EC 3.4.24.-) 3251 133 55989 alignment trimmed tree collapsed 0.021 0.641
4582 197 Hydrogenase maturation factor hoxO 3250 133 1827-70 alignment trimmed tree collapsed 0.010 1.033
4583 197 Hydrogenase maturation factor hoxQ 3249 133 55989 alignment trimmed tree collapsed 0.012 0.382
4584 197 Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) 4948 2810 3248 311 B088 alignment trimmed tree collapsed 0.585 0.944
4585 197 Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) 4949 2809 3247 261 KO11 alignment trimmed tree collapsed 0.687 1.361
4586 197 Phosphoanhydride phosphohydrolase (EC 3.1.3.2) (pH 2.5 acid phosphatase) (AP) / 4- phytase (EC 3.1.3.26) 4610 27 3246 254 E24377A alignment trimmed tree collapsed 1.605 1.054
4587 197 Tyrosine-protein kinase Wzc (EC 2.7.10.2) 3139 2837 3245 259 MS 107-1 alignment trimmed tree collapsed 0.974 0.980
4588 197 Low molecular weight protein-tyrosine-phosphatase Wzb (EC 3.1.3.48) 3140 2836 216 O157:H7 str. TW14359 alignment trimmed tree collapsed 0.821 0.876
4589 197 Putative polysaccharide export protein YccZ precursor 3141 1417 2835 227 O157:H7 str. EC4196 alignment trimmed tree collapsed 0.480 0.939
4590 197 Putative polysaccharide export protein YccZ precursor 1
4591 197 Putative outer membrane lipoprotein YmcA 1416 2937 214 55989 alignment trimmed tree collapsed 0.504 1.172
4592 197 YjbG polysaccharide synthesis-related protein 1059 1415 2938 187 55989 alignment trimmed tree collapsed 0.024 0.668
4593 197 Uncharacterized lipoprotein YmcC precursor 1058 1414 2939 221 55989 alignment trimmed tree collapsed 0.005 1.236
4594 197 hypothetical protein 1413 91 HS alignment trimmed tree collapsed 0.033 0.258
4595 197 Cold shock protein CspH 1632 3902 4597 5319 2178 3315 3316 3937 4703 812 MS 146-1 alignment trimmed tree collapsed 1.096 1.709
4596 197 IS1 ORF2 105 655 2676 4640 216 ETEC H10407 alignment trimmed tree collapsed 0.033 0.526
4597 197 Cold shock protein CspG 1632 3902 4595 4727 5319 2178 3315 3316 3937 4574 4703 947 O157:H7 str. EC4024 alignment trimmed tree collapsed 1.174 0.830
4598 197 hypothetical protein 3314 38 E2348/69 alignment trimmed tree collapsed 0.025 0.258
4599 197 GnsA protein 3312 147 ED1a alignment trimmed tree collapsed 0.459 0.707
4600 197 Hypothetical iron-sulfur cluster binding protein YccM 3311 128 55989 alignment trimmed tree collapsed 0.021 0.614
4601 197 Sensor protein torS (EC 2.7.3.-) 3310 129 55989 alignment trimmed tree collapsed 0.033 1.130
4602 197 Periplasmic protein torT precursor 3 O157:H7 str. EC4024 alignment trimmed tree collapsed 0.054 1.385
4603 197 Functional role page for Cytochrome c-type protein TorC 3307 164 B7A alignment trimmed tree collapsed 1.330 0.512
4604 197 Trimethylamine-N-oxide reductase (EC 1.6.6.9) 3965 325 3306 250 O111:H- str. 11128 alignment trimmed tree collapsed 1.028 0.968
4605 197 Functional role page for Chaperone protein TorD 3305 123 O26:H11 str. 11368 alignment trimmed tree collapsed 0.062 0.540
4606 197 Chaperone-modulator protein CbpM 3304 134 042 alignment trimmed tree collapsed 0.000 0.555
4607 197 DnaJ-class molecular chaperone CbpA 5571 2052 3303 264 55989 alignment trimmed tree collapsed 1.107 0.337
4608 197 FIG00638642: hypothetical protein 29 61 55989 alignment trimmed tree collapsed 0.279 0.265
4609 197 FIG00638470: hypothetical protein 28 32 TA271 alignment trimmed tree collapsed 0.106 1.732
4610 197 Glucose-1-phosphatase (EC 3.1.3.10) 4586 27 3246 254 55989 alignment trimmed tree collapsed 1.581 1.032
4611 197 Putative cytoplasmic protein 26 133 O157:H7 str. TW14588 alignment trimmed tree collapsed 0.000 0.193
4612 197 Flavoprotein wrbA 25 132 MS 78-1 alignment trimmed tree collapsed 0.000 0.515
4613 197 FIG00639131: hypothetical protein 2310 85 B str. REL606 alignment trimmed tree collapsed 0.024 1.283
4614 197 Uracil permease 2916 2309 3922 219 B171 alignment trimmed tree collapsed 1.104 0.904
4615 197 Predicted flavin reductase RutF in novel pyrimidine catabolism pathway 2308 146 MS 145-7 alignment trimmed tree collapsed 0.013 0.592
4616 197 hypothetical protein 1
4617 197 Predicted reductase RutE in novel pyrimidine catabolism pathway 2307 130 MS 78-1 alignment trimmed tree collapsed 0.074 4.923
4618 197 Possible hydrolase or acyltransferase RutD in novel pyrimidine catabolism pathway 2306 132 B088 alignment trimmed tree collapsed 0.000 1.282
4619 197 Possible ring-opening amidohydrolase RutC in novel pyrimidine catabolism pathway 947 1690 1798 2305 3957 393 KO11 alignment trimmed tree collapsed 1.540 1.352
4620 197 Predicted amidohydrolase RutB in novel pyrimidine catabolism pathway 2304 241 E110019 alignment trimmed tree collapsed 1.610 0.887
4621 197 Predicted monooxygenase RutA in novel pyrimidine catabolism pathway 2303 130 W alignment trimmed tree collapsed 0.006 0.843
4622 197 Predicted monooxygenase RutA in novel pyrimidine catabolism pathway 1
4623 197 Transcriptional regulator RutR of pyrimidine catabolism (TetR family) 2302 134 E2348/69 alignment trimmed tree collapsed 0.000 0.336
4624 197 Transcriptional repressor of PutA and PutP / Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) 2301 131 O26:H11 str. 11368 alignment trimmed tree collapsed 0.009 0.347
4625 197 Transcriptional repressor of PutA and PutP / Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12) 131 MS 84-1 alignment trimmed tree collapsed 0.002 0.297
4626 197 hypothetical protein 4614 124 ATCC 8739 alignment trimmed tree collapsed 0.000 0.657
4627 197 hypothetical protein 4613 118 O26:H11 str. 11368 alignment trimmed tree collapsed 0.000 0.219
4628 197 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter 4612 141 E24377A alignment trimmed tree collapsed 0.005 0.373
4629 197 Ferrous iron transport permease EfeU 4611 122 UMN026 alignment trimmed tree collapsed 0.004 0.703
4630 197 Ferrous iron transport periplasmic protein EfeO, contains peptidase-M75 domain and (frequently) cupredoxin-like domain 4610 133 W alignment trimmed tree collapsed 0.006 0.440
4631 197 Ferrous iron transport peroxidase EfeB 4609 130 MS 124-1 alignment trimmed tree collapsed 0.009 0.513
4632 197 FIG00639962: hypothetical protein 4608 43 MS 107-1 alignment trimmed tree collapsed 0.026 0.209
4633 197 Phosphate starvation-inducible protein PhoH, predicted ATPase 4607 114 B088 alignment trimmed tree collapsed 0.007 0.577
4634 197 Biofilm PGA synthesis auxiliary protein PgaD 4606 78 O157:H7 str. EC869 alignment trimmed tree collapsed 0.000 0.415
4635 197 Biofilm PGA synthesis N-glycosyltransferase PgaC (EC 2.4.-.-) 106 HS alignment trimmed tree collapsed 0.003 0.146
4636 197 Biofilm PGA synthesis deacetylase PgaB (EC 3.-) 3486 96 O157:H7 str. EC4045 alignment trimmed tree collapsed 0.000 0.608
4637 197 Biofilm PGA outer membrane secretin PgaA 3485 102 55989 alignment trimmed tree collapsed 0.016 0.081
4638 197 Biofilm PGA outer membrane secretin PgaA 3485 93 55989 alignment trimmed tree collapsed 0.004 0.155
4639 197 InsA protein (Fragment) 654 1681 2675 10 H299 alignment trimmed tree collapsed 0.176 0.676
4640 197 Transposase 105 655 2676 4596 216 B7A alignment trimmed tree collapsed 0.026 0.720
4641 198 Attachment invasion locus protein precursor 37 4870 4924 608 3704 4596 692 UMN026 alignment trimmed tree collapsed 1.187 0.538
4642 198 Phage tail fiber protein 4 B171 alignment trimmed tree collapsed 0.068 1.238
4643 198 FIG00644839: hypothetical protein 4399 38 55989 alignment trimmed tree collapsed 1.551 1.541
4644 198 hypothetical protein 4400 2 alignment trimmed
4645 199 Phage tail fiber protein 4869 302 55989 alignment trimmed tree collapsed 0.042 0.672
4646 200 Phage tail length tape-measure protein 1 4864 228 O157:H7 str. EC4401 alignment trimmed tree collapsed 0.158 0.314
4647 201 FIG00639776: hypothetical protein 52 327 313 55989 alignment trimmed tree collapsed 1.339 0.466
4648 201 putative lysis protein S of prophage CP-933V 26 4333 4841 911 580 CFT073 alignment trimmed tree collapsed 0.095 0.238
4649 201 FIG00640178: hypothetical protein 9 55989 alignment trimmed tree collapsed 0.255 1.162
4650 201 hypothetical protein 4260 32 O157:H7 EDL933 alignment trimmed tree collapsed 0.768 3.873
4651 201 Phage endolysin 8 196 436 55989 alignment trimmed tree collapsed 0.127 0.392
4652 201 FIG00641645: hypothetical protein 193 305 2813 4183 4797 22 ED1a alignment trimmed tree collapsed 0.001 0.658
4653 201 hypothetical protein 304 4182 4798 60 O157:H7 EDL933 alignment trimmed tree collapsed 0.000 0.094
4654 201 Phage endopeptidase 4799 5 ED1a alignment trimmed tree collapsed 0.090 0.362
4655 202 hypothetical protein 95 O26:H11 str. 11368 alignment trimmed tree collapsed 0.886 3.299
4656 203 hypothetical protein 1125 67 042 alignment trimmed tree collapsed 0.052 0.297
4657 203 cryptic prophage CP-933M antitermination protein Q-like protein 1124 203 UTI89 alignment trimmed tree collapsed 0.877 0.114
4658 203 Phage antitermination protein Q 1124 152 55989 alignment trimmed tree collapsed 1.596 0.047
4659 203 hypothetical protein 546 4520 183 B171 alignment trimmed tree collapsed 0.055 0.134
4660 203 probable DNA methylase 104 042 alignment trimmed tree collapsed 0.068 0.272
4661 204 LygF 329 955 2983 209 55989 alignment trimmed tree collapsed 0.092 0.730
4662 205 hypothetical protein 947 133 B171 alignment trimmed tree collapsed 0.020 0.398
4663 206 hypothetical protein 3786 95 MS 124-1 alignment trimmed tree collapsed 0.000 0.303
4664 206 Hydrolase (HAD superfamily) 4688 3763 3785 267 O103:H2 str. 12009 alignment trimmed tree collapsed 0.007 0.358
4665 206 Hydrolase (HAD superfamily) 4688 3763 3785 267 IAI39 alignment trimmed tree collapsed 0.017 0.965
4666 206 Pyruvate formate-lyase (EC 2.3.1.54) 1374 3784 4292 263 B088 alignment trimmed tree collapsed 0.005 0.125
4667 206 Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) 1375 3783 4293 271 55989 alignment trimmed tree collapsed 0.032 0.139
4668 206 Transaldolase (EC 2.2.1.2) 1369 3782 4287 266 E2348/69 alignment trimmed tree collapsed 0.409 0.097
4669 206 Molybdopterin biosynthesis protein MoeB 1021 3465 3781 267 042 alignment trimmed tree collapsed 1.023 0.292
4670 206 Molybdopterin biosynthesis protein MoeA 3780 134 55989 alignment trimmed tree collapsed 0.010 0.822
4671 206 Isoaspartyl aminopeptidase (EC 3.4.19.5) @ Asp-X dipeptidase 3779 109 KO11 alignment trimmed tree collapsed 0.000 0.907
4672 206 Glutothione ABC transporter ATP-binding protein 3778 133 B171 alignment trimmed tree collapsed 0.007 1.099
4673 206 Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2); Putative hemin-binding lipoprotein 2061 2188 4095 4563 1425 1877 2694 3380 3777 633 KO11 alignment trimmed tree collapsed 2.831 0.543
4674 206 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) 1
4675 206 putative transport system permease protein 2186 3657 3776 311 O157:H7 str. EC4024 alignment trimmed tree collapsed 0.000 0.393
4676 206 Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) 4054 3284 3775 278 MS 196-1 alignment trimmed tree collapsed 1.538 0.336
4677 206 hypothetical protein 3774 119 MS 78-1 alignment trimmed tree collapsed 0.002 0.911
4678 206 FIG00638322: hypothetical protein 70 55989 alignment trimmed tree collapsed 0.009 0.515
4679 206 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase 3772 134 MS 175-1 alignment trimmed tree collapsed 0.000 0.508
4680 206 Biofilm regulator bssR 3771 132 042 alignment trimmed tree collapsed 0.000 0.305
4681 206 Soluble aldose sugar dehydrogenase, PQQ-dependent (EC 1.1.5.-) 3770 116 55989 alignment trimmed tree collapsed 0.015 0.537
4682 206 Uncharacterized glutathione S-transferase-like protein 2331 3383 3102 3518 3769 394 F11 alignment trimmed tree collapsed 2.249 1.351
4683 206 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) 3585 5327 1280 3768 4711 335 O157:H7 str. EC4501 alignment trimmed tree collapsed 0.003 0.628
4684 206 Deoxyribose operon repressor, DeoR family 675 1285 1711 2003 2569 2605 3838 4045 80 296 666 749 2961 3206 3767 4389 4620 1074 O111:H- str. 11128 alignment trimmed tree collapsed 2.577 0.957
4685 206 Putative permease 3766 130 APEC O1 alignment trimmed tree collapsed 0.006 0.806
4686 206 Multidrug translocase MdfA 753 110 3765 236 APEC O1 alignment trimmed tree collapsed 0.013 0.825
4687 206 hypothetical protein 3764 130 KO11 alignment trimmed tree collapsed 0.000 0.620
4688 206 Protein ybjI 1584 4976 1924 2192 3763 3785 526 1827-70 alignment trimmed tree collapsed 2.494 0.915
4689 206 Putative transport protein/putative regulator 3762 131 101-1 alignment trimmed tree collapsed 0.003 0.261
4690 206 Transcriptional regulator, TetR family 5461 3725 3761 256 O157:H7 str. EC869 alignment trimmed tree collapsed 1.543 0.918
4691 206 TrkA, Potassium channel-family protein 1570 693 3760 255 1125A alignment trimmed tree collapsed 1.672 0.921
4692 206 Inner membrane protein 3759 134 TA280 alignment trimmed tree collapsed 0.000 0.477
4693 206 Glutaredoxin 1 1488 3073 3758 274 E110019 alignment trimmed tree collapsed 1.424 0.133
4694 206 hypothetical protein; Some similarities with putative membrane protein YbjC of Escherichia coli 3757 137 B171 alignment trimmed tree collapsed 0.033 0.459
4695 206 Oxygen-insensitive NADPH nitroreductase (EC 1.-.-.-) 3756 129 55989 alignment trimmed tree collapsed 0.013 3.042
4696 206 Ribosomal protein S6 glutaminyl transferase 3755 130 B171 alignment trimmed tree collapsed 0.000 0.356
4697 206 putative sensory transduction regulator 3754 135 E2348/69 alignment trimmed tree collapsed 0.000 0.224
4698 206 hypothetical protein 40 MS 21-1 alignment trimmed tree collapsed 0.104 1.180
4699 206 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) 17 536A alignment trimmed tree collapsed 0.021 0.403
4700 206 Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) 3837 136 MS 115-1 alignment trimmed tree collapsed 0.003 1.063
4701 206 Putrescine transport ATP-binding protein PotG (TC 3.A.1.11.2) 2032 4183 1905 3838 4843 362 55989 alignment trimmed tree collapsed 0.015 0.461
4702 206 Putrescine transport system permease protein PotH (TC 3.A.1.11.2) 3839 132 E24377A alignment trimmed tree collapsed 0.010 0.595
4703 206 Putrescine transport system permease protein PotI (TC 3.A.1.11.2) 2838 4185 3 3840 4845 389 B088 alignment trimmed tree collapsed 1.891 1.199
4704 206 Putative inner membrane protein 3841 129 IAI39 alignment trimmed tree collapsed 0.000 0.261
4705 206 23S rRNA (Uracil-5-) -methyltransferase rumB (EC 2.1.1.-) 3827 3842 259 O26:H11 str. 11368 alignment trimmed tree collapsed 1.615 1.531
4706 206 Arginine ABC transporter, periplasmic arginine-binding protein ArtJ 3392 4709 4921 1836 3109 3110 3843 3846 649 ABU 83972 alignment trimmed tree collapsed 0.038 0.426
4707 206 Arginine ABC transporter, permease protein ArtM 3388 3389 3449 4708 4920 5004 284 285 624 1835 3107 3108 3844 1061 O157:H7 str. TW14359 alignment trimmed tree collapsed 2.163 0.318
4708 206 Arginine ABC transporter, permease protein ArtQ 3388 3389 3449 4707 4920 5004 284 285 624 1835 3107 3108 3844 1057 str. K-12 substr. MG1655 alignment trimmed tree collapsed 1.474 0.013
4709 206 Arginine ABC transporter, periplasmic arginine-binding protein ArtI 3392 3451 4706 4921 626 1836 3109 3110 3843 3846 792 MS 175-1 alignment trimmed tree collapsed 1.458 0.595
4710 206 Arginine ABC transporter, ATP-binding protein ArtP 926 1142 1150 1461 1857 2032 2037 2065 2183 2184 2837 3086 3203 3387 3448 4082 4183 4230 4444 4453 4567 4672 4701 4726 4919 5003 5194 5555 5625 4 92 283 450 623 835 1438 1565 1710 1834 1873 1900 1905 2273 2517 2530 2698 2929 3106 3242 3358 3384 3654 3655 3778 3838 3847 4472 4573 4758 4790 4843 4209 53638 alignment trimmed tree collapsed 1.913 0.926
4711 206 probable lipoprotein 3848 124 53638 alignment trimmed tree collapsed 0.000 1.014
4712 206 hypothetical protein 3849 132 TA271 alignment trimmed tree collapsed 0.000 0.301
4713 206 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) 3850 132 O157:H7 str. EC4206 alignment trimmed tree collapsed 0.004 0.262
4714 206 Putative nucleotide di-P-sugar epimerase or dehydratase 434 4969 2199 3681 3851 366 O103:H2 str. 12009 alignment trimmed tree collapsed 2.830 1.087
4715 206 hypothetical protein 3852 131 MS 124-1 alignment trimmed tree collapsed 0.011 0.721
4716 206 Low-specificity L-threonine aldolase (EC 4.1.2.5) 3853 134 E24377A alignment trimmed tree collapsed 0.012 0.349
4717 206 Pyruvate oxidase [ubiquinone, cytochrome] (EC 1.2.2.2) 3854 135 BL21(DE3) alignment trimmed tree collapsed 0.011 0.498
4718 206 Pyruvate oxidase [ubiquinone, cytochrome] (EC 1.2.2.2) 1555 5638 677 1772 3854 392 55989 alignment trimmed tree collapsed 0.019 1.293
4719 206 NADH oxidoreductase hcr (EC 1.-.-.-) 3879 4132 1344 3636 3855 287 55989 alignment trimmed tree collapsed 2.199 1.040
4720 206 Hydroxylamine reductase (EC 1.7.-.-) 3856 132 APEC O1 alignment trimmed tree collapsed 0.000 0.839
4721 206 Putative surface protein 3857 131 042 alignment trimmed tree collapsed 0.011 0.479
4722 206 Aquaporin Z 1343 4004 4569 280 str. K-12 substr. MG1655 alignment trimmed tree collapsed 0.005 0.804
4723 206 Predicted ATP-dependent endonuclease of the OLD family 4570 133 KO11 alignment trimmed tree collapsed 0.003 0.953
4724 206 Virulence factor VirK 4571 134 MS 119-7 alignment trimmed tree collapsed 0.007 1.075
4725 206 Macrolide-specific efflux protein MacA 4572 114 ATCC 8739 alignment trimmed tree collapsed 0.003 0.113
4726 206 Macrolide export ATP-binding/permease protein MacB (EC 3.6.3.-) 4573 134 55989 alignment trimmed tree collapsed 0.007 0.233
4727 206 Cold shock protein CspD 1632 3902 4597 5319 2178 3315 3937 4574 4703 767 E2348/69 alignment trimmed tree collapsed 0.774 2.102
4728 206 ATP-dependent Clp protease adaptor protein ClpS 4575 133 O157:H7 str. EC4113 alignment trimmed tree collapsed 0.000 0.217
4729 206 ATP-dependent Clp protease ATP-binding subunit ClpA 4576 124 MS 45-1 alignment trimmed tree collapsed 0.000 0.093
4730 206 Translation initiation factor 1 416 130 EC4100B alignment trimmed tree collapsed 0.000 7.224
4731 206 Leucyl/phenylalanyl-tRNA--protein transferase (EC 2.3.2.6) 417 126 MS 198-1 alignment trimmed tree collapsed 0.005 0.735
4732 206 Transport ATP-binding protein CydC 5141 418 1400 253 MS 84-1 alignment trimmed tree collapsed 1.842 0.495
4733 206 Transport ATP-binding protein CydD 419 221 O55:H7 str. CB9615 alignment trimmed tree collapsed 2.063 0.779
4734 206 Thioredoxin reductase (EC 1.8.1.9) 5299 401 420 266 MS 116-1 alignment trimmed tree collapsed 0.000 0.023
4735 206 hypothetical protein 119 MS 185-1 alignment trimmed tree collapsed 0.000 0.284
4736 206 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system 1455 421 1399 2536 389 E2348/69 alignment trimmed tree collapsed 1.601 1.392
4737 206 Cell division protein FtsK 2 TA271 alignment trimmed
4738 206 Cell division protein FtsK 777 129 MS 187-1 alignment trimmed tree collapsed 0.000 0.793
4739 206 Outer membrane lipoprotein carrier protein LolA 776 130 W3110 alignment trimmed tree collapsed 0.000 0.304
4740 206 FIG065221: ATPase, AAA family 775 130 MS 78-1 alignment trimmed tree collapsed 0.005 1.855
4741 206 Seryl-tRNA synthetase (EC 6.1.1.11) 774 134 MS 124-1 alignment trimmed tree collapsed 0.000 0.175
4742 206 Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-) 3633 3634 773 2358 2359 359 55989 alignment trimmed tree collapsed 0.476 0.116
4743 206 Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.99.-) 1118 3635 772 2295 413 UMN026 alignment trimmed tree collapsed 0.067 0.791
4744 206 Anaerobic dimethyl sulfoxide reductase chain C (EC 1.8.99.-) 3636 771 3521 257 OP50 alignment trimmed tree collapsed 0.695 0.357
4745 206 Nicotinamidase family protein YcaC 770 129 MS 84-1 alignment trimmed tree collapsed 0.000 0.486
4746 206 FIG00638804: hypothetical protein 769 23 str. K-12 substr. MG1655 alignment trimmed tree 0.000 0.000
4747 206 Hypothetical MFS-type transporter protein ycaD 73 H736 alignment trimmed tree collapsed 0.000 0.722
4748 206 Probable transport protein 767 110 IAI1 alignment trimmed tree collapsed 0.005 0.237
4749 206 Putative LysR-like transcriptional regulator 1827 2153 2212 2705 3875 4093 5493 618 766 1338 1427 2366 3803 4342 1194 55989 alignment trimmed tree collapsed 3.211 0.779
4750 206 putative NAD(P)H dehydrogenase 1918 765 4503 192 IAI39 alignment trimmed tree collapsed 0.000 1.418
4751 206 putative NAD(P)H dehydrogenase 765 63 55989 alignment trimmed tree collapsed 0.023 2.340
4752 206 Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) 1375 764 4293 280 536 alignment trimmed tree collapsed 0.000 0.240
4753 206 Pyruvate formate-lyase (EC 2.3.1.54) 1691 763 3958 258 1125A alignment trimmed tree collapsed 0.006 0.606
4754 206 Formate efflux transporter (TC 2.A.44 family) 762 3917 217 O127:H6 str. E2348/69 alignment trimmed tree collapsed 0.000 0.821
4755 206 hypothetical protein 1608 130 OP50 alignment trimmed tree collapsed 0.004 0.891
4756 206 Putative inner membrane protein 1609 130 55989 alignment trimmed tree collapsed 0.009 0.867
4757 206 Phosphoserine aminotransferase (EC 2.6.1.52) 1610 133 EC4100B alignment trimmed tree collapsed 0.003 1.002
4758 206 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) 1611 127 O157:H7 str. EC508 alignment trimmed tree collapsed 0.009 0.397
4759 206 Putative heat shock protein 2465 1612 2510 265 536A alignment trimmed tree collapsed 0.004 0.118
4760 206 Cytidylate kinase (EC 2.7.4.14) 1613 134 ABU 83972 alignment trimmed tree collapsed 0.000 0.094
4761 206 FIG01068856: hypothetical protein 1
4762 206 SSU ribosomal protein S1p 1614 126 MS 21-1 alignment trimmed tree collapsed 0.002 11.180
4763 206 Integration host factor beta subunit 1029 3774 5131 843 1391 1615 3457 529 E2348/69 alignment trimmed tree collapsed 0.000 0.456
4764 206 Predicted hydrolase of the metallo-beta-lactamase superfamily, clustered with KDO2-Lipid A biosynthesis genes 122 55989 alignment trimmed tree collapsed 0.026 1.087
4765 206 Lipid A export ATP-binding/permease protein MsbA (EC 3.6.3.25) 3512 5141 5142 1400 1401 2564 3291 470 O157:H7 str. EC4486 alignment trimmed tree collapsed 1.970 0.757
4766 206 Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) 2563 129 IAI1 alignment trimmed tree collapsed 0.022 0.743
4767 206 Putative cytoplasmic protein 2562 126 H591 alignment trimmed tree collapsed 0.029 0.434
4768 206 UPF0434 protein YcaR 2561 134 KO11 alignment trimmed tree collapsed 0.000 0.197
4769 206 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) 2560 177 E24377A alignment trimmed tree collapsed 0.833 0.587
4770 206 hypothetical protein 2559 134 W alignment trimmed tree collapsed 0.004 0.687
4771 206 Membrane Protein Functionally coupled to the MukBEF Chromosome Partitioning Mechanism 2558 130 B171 alignment trimmed tree collapsed 0.005 0.372
4772 206 S-adenosylmethionine-dependent methyltransferase Functionally Coupled to the MukBEF Chromosome Partitioning Mechanism 2557 130 E22 alignment trimmed tree collapsed 0.000 0.855
4773 206 Chromosome partition protein MukF 2556 132 ATCC 8739 alignment trimmed tree collapsed 0.000 0.542
4774 206 Chromosome partition protein MukE 2555 132 BL21(DE3) alignment trimmed tree collapsed 0.005 0.976
4775 206 Chromosome partition protein MukB 128 H736 alignment trimmed tree collapsed 0.002 0.123
4776 206 L,D-transpeptidase YcbB 195 131 MS 175-1 alignment trimmed tree collapsed 0.007 0.940
4777 206 FIG001587: exported protein 194 133 APEC O1 alignment trimmed tree collapsed 0.000 0.095
4778 206 Hypothetical metal-binding enzyme, YcbL homolog 193 134 MS 200-1 alignment trimmed tree collapsed 0.129 11.533
4779 206 Hypothetical metal-binding enzyme, YcbL homolog 193 133 O157:H7 str. EC4196 alignment trimmed tree collapsed 0.007 0.510
4780 206 Transposase 2580 3418 5370 4816 249 O103:H2 str. 12009 alignment trimmed tree collapsed 0.004 0.262
4781 206 Aspartate aminotransferase (EC 2.6.1.1) 1095 1838 3320 261 W alignment trimmed tree collapsed 0.006 0.522
4782 206 Outer membrane protein F precursor 3300 4840 5404 563 1371 1839 3089 607 B088 alignment trimmed tree collapsed 0.749 0.442
4783 206 hypothetical protein 39 TA143 alignment trimmed tree collapsed 0.068 0.590
4784 206 Asparaginyl-tRNA synthetase (EC 6.1.1.22) 2553 1504 1840 261 MS 175-1 alignment trimmed tree collapsed 1.825 0.180
4785 206 Nicotinate phosphoribosyltransferase (EC 2.4.2.11) 1841 128 H591 alignment trimmed tree collapsed 0.003 0.713
4786 206 hypothetical protein 1842 76 O157:H7 str. TW14588 alignment trimmed tree collapsed 0.000 0.115
4787 206 Membrane alanine aminopeptidase N (EC 3.4.11.2) 130 ETEC H10407 alignment trimmed tree collapsed 0.006 0.758
4788 206 hypothetical protein 1801 25 B171 alignment trimmed tree collapsed 0.000 0.362
4789 206 hypothetical protein 1
4790 206 Alkanesulfonates ABC transporter ATP-binding protein / Sulfonate ABC transporter, ATP-binding subunit SsuB 1142 1150 1857 2032 2037 2038 2048 2065 2183 2837 3203 3263 3387 3448 3513 4082 4183 4453 4701 4710 4726 4732 4919 5003 5194 5279 5380 4 92 283 418 530 623 1438 1710 1802 1815 1834 1873 1890 1899 1900 1905 2273 2517 2709 2929 3106 3242 3292 3654 3838 3847 4472 4573 4843 3857 UTI89 alignment trimmed tree collapsed 2.088 0.235
4791 206 Alkanesulfonates transport system permease protein 1803 2710 262 MS 187-1 alignment trimmed tree collapsed 0.000 0.376
4792 206 Alkanesulfonate monooxygenase (EC 1.14.14.5) 1804 133 E110019 alignment trimmed tree collapsed 0.000 1.208
4793 206 Alkanesulfonates-binding protein 1805 134 B088 alignment trimmed tree collapsed 0.019 0.241
4794 206 FMN reductase (EC 1.5.1.29) 1806 133 MS 69-1 alignment trimmed tree collapsed 0.006 0.327
4795 206 type 1 fimbriae major subunit FimA 2195 2196 2149 4213 4745 348 O26:H11 str. 11368 alignment trimmed tree collapsed 0.169 0.849
4796 206 Putative chaperone 1620 1726 2194 2198 3191 4257 4802 5237 171 235 1515 1601 2150 3364 4211 4317 4744 4926 1235 H591 alignment trimmed tree collapsed 1.486 1.069
4797 206 type 1 fimbriae anchoring protein FimD 1727 170 4925 152 HS alignment trimmed tree collapsed 1.203 2.269
4798 206 type 1 fimbriae anchoring protein FimD 1727 2193 4256 5238 5702 170 236 1600 3363 3663 4743 4925 1049 E24377A alignment trimmed tree collapsed 1.530 0.654
4799 206 Homolog of Salmonella FimH protein 3362 3662 189 55989 alignment trimmed tree collapsed 2.337 0.593
4800 206 Putative fimbrial-like protein 1621 2195 4255 4801 5236 234 238 1599 2149 3365 4318 4319 970 E24377A alignment trimmed tree collapsed 2.274 0.083
4801 206 type 1 fimbrae adaptor subunit FimF 1621 2195 3427 4255 5236 234 593 1599 2149 3365 4318 631 55989 alignment trimmed tree collapsed 1.296 0.238
4802 206 Hypothetical fimbrial chaperone ycbF precursor 1620 1726 2194 2198 4257 4796 5237 5704 171 235 1601 2150 3364 4211 4317 4744 4926 1049 B171 alignment trimmed tree collapsed 2.780 0.497
4803 206 Dihydroorotate dehydrogenase (EC 1.3.3.1) 4316 131 O157:H7 str. EC4401 alignment trimmed tree collapsed 0.007 0.348
4804 206 hypothetical protein 4315 123 042 alignment trimmed tree collapsed 0.012 0.660
4805 206 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 4314 129 E110019 alignment trimmed tree collapsed 0.003 0.669
4806 206 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) 4313 120 55989 alignment trimmed tree collapsed 0.003 0.591
4807 206 ABC transporter ATP-binding protein uup 4312 127 IAI39 alignment trimmed tree collapsed 0.007 1.044
4808 206 Paraquat-inducible protein A 4311 128 O26:H11 str. 11368 alignment trimmed tree collapsed 0.000 0.676
4809 206 Paraquat-inducible protein B 4310 117 SE11 alignment trimmed tree collapsed 0.000 0.613
4810 206 probable lipoprotein protein YPO1422 4309 127 H736 alignment trimmed tree collapsed 0.022 1.023
4811 206 Ribosome modulation factor 125 HS alignment trimmed tree collapsed 0.000 0.129
4812 206 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60) 4308 119 ATCC 8739 alignment trimmed tree collapsed 0.007 2.450
4813 206 ATP-dependent protease La (EC 3.4.21.53) Type II 4307 109 O55:H7 str. CB9615 alignment trimmed tree collapsed 0.000 0.908
4814 206 putative dehydrogenase 4306 111 MS 175-1 alignment trimmed tree collapsed 0.007 0.712
4815 206 Outer membrane protein A precursor 4305 110 O157:H7 EDL933 alignment trimmed tree collapsed 0.050 0.810
4816 206 Cell division inhibitor 4304 129 E2348/69 alignment trimmed tree collapsed 0.000 0.529
4817 206 DNA transformation protein TfoX 4303 127 SE11 alignment trimmed tree collapsed 0.006 0.805
4818 206 Putative efflux (PET) family inner membrane protein YccS 4302 134 O157:H7 str. EC4486 alignment trimmed tree collapsed 0.005 0.614
4819 206 Putative efflux (PET) family inner membrane protein YccS 1
4820 206 Inner membrane protein YccF 4301 133 O103:H2 str. 12009 alignment trimmed tree collapsed 0.008 1.528
4821 206 DNA helicase IV 128 E110019 alignment trimmed tree collapsed 0.005 1.040
4822 206 Methylglyoxal synthase (EC 4.2.3.3) 3168 131 101-1 alignment trimmed tree collapsed 0.013 2.333
4823 206 UPF0319 protein YccT precursor 130 HS alignment trimmed tree collapsed 0.000 3.231
4824 206 hypothetical protein 3260 100 MS 115-1 alignment trimmed tree collapsed 0.019 0.576
4825 206 Succinyl-CoA synthetase, alpha subunit-related enzymes 3259 133 APEC O1 alignment trimmed tree collapsed 0.000 0.642
4826 206 hemimethylated DNA binding protein YccV 3258 133 B7A alignment trimmed tree collapsed 0.000 0.152
4827 206 LSU m5C1962 methyltransferase RlmI 3257 124 O157:H7 EDL933 alignment trimmed tree collapsed 0.011 0.673
4828 206 Acylphosphate phosphohydrolase (EC 3.6.1.7), putative 125 E24377A alignment trimmed tree collapsed 0.023 1.201
4829 206 tRNA 2-thiouridine synthesizing protein E (EC 2.8.1.-) 3256 131 O157:H7 EDL933 alignment trimmed tree collapsed 0.010 0.673
4830 206 Putative TEGT family carrier/transport protein 3255 127 MS 119-7 alignment trimmed tree collapsed 0.010 0.744
4831 207 hypothetical protein 4196 58 101-1 alignment trimmed tree collapsed 0.032 4.747
4832 207 hypothetical protein 4196 70 B7A alignment trimmed tree collapsed 0.127 2.496
4833 207 hypothetical protein 4195 5 MS 84-1 alignment trimmed tree collapsed 0.012 0.640
4834 207 FIG00638895: hypothetical protein 2065 88 55989 alignment trimmed tree collapsed 0.068 0.250
4835 207 Protein NinE 2066 50 55989 alignment trimmed tree collapsed 0.036 1.466
4836 207 FIG00639062: hypothetical protein 67 272 2067 152 O157:H7 str. FRIK966 alignment trimmed tree collapsed 0.021 0.789
4837 207 Holliday junction resolvase / Crossover junction endodeoxyribonuclease rusA (EC 3.1.22.-) 66 552 4008 271 1125 2788 3092 450 UTI89 alignment trimmed tree collapsed 1.464 0.780
4838 207 FIG00638268: hypothetical protein 3091 99 55989 alignment trimmed tree collapsed 0.049 0.415
4839 207 Phage antitermination protein Q 173 549 2791 3090 204 H299 alignment trimmed tree collapsed 0.905 0.558
4840 207 Outer membrane porin protein NmpC precursor 5404 1371 3089 302 B7A alignment trimmed tree collapsed 0.681 0.140
4841 207 Lysis protein S 26 4333 4648 911 578 042 alignment trimmed tree collapsed 0.313 0.543
4842 207 Probable lysozyme from lambdoid prophage DLP12 (EC 3.2.1.17) 196 4651 912 507 53638 alignment trimmed tree collapsed 0.053 0.376
4843 207 Phage endopeptidase 30 192 4331 4654 4184 4799 552 55989 alignment trimmed tree collapsed 0.979 1.175
4844 207 FIG00641140: hypothetical protein 4812 7 55989 alignment trimmed tree 0.000 0.000
4845 207 hypothetical protein 189 CFT073 alignment trimmed tree collapsed 0.771 1.634
4846 207 hypothetical protein 349 3427 64 FVEC1302 alignment trimmed tree collapsed 0.043 1.373
4847 207 Terminase small subunit 3426 193 55989 alignment trimmed tree collapsed 0.006 0.570
4848 207 Phage terminase, large subunit 3425 307 EC4100B alignment trimmed tree collapsed 0.014 0.800
4849 207 Phage terminase, large subunit 3425 277 55989 alignment trimmed tree collapsed 0.629 0.089
4850 207 hypothetical protein 1
4851 207 Phage head-to-tail joining protein 4317 3424 275 ETEC H10407 alignment trimmed tree collapsed 0.014 0.218
4852 207 hypothetical protein 3423 175 MS 145-7 alignment trimmed tree collapsed 0.180 0.452
4853 207 hypothetical protein 4318 3423 4188 277 IAI1 alignment trimmed tree collapsed 0.031 0.084
4854 207 Head-tail preconnector protein GP5 3422 104 042 alignment trimmed tree collapsed 0.022 0.219
4855 207 Head decoration protein 4321 460 3421 275 O157:H7 EDL933 alignment trimmed tree collapsed 0.856 0.184
4856 207 Phage major capsid protein 4322 3420 219 55989 alignment trimmed tree collapsed 0.052 0.511
4857 207 Phage DNA-packaging protein 3419 158 ATCC 8739 alignment trimmed tree collapsed 0.133 0.327
4858 207 Tail attachment protein 4324 3418 200 H591 alignment trimmed tree collapsed 0.049 0.281
4859 207 Prophage minor tail Z family protein 4325 3417 303 IAI1 alignment trimmed tree collapsed 0.010 1.137
4860 207 Phage minor tail protein 4326 3416 321 EC4100B alignment trimmed tree collapsed 0.031 0.721
4861 207 Putative tail component of prophage CP-933K 3415 309 ATCC 8739 alignment trimmed tree collapsed 0.307 0.337
4862 207 Phage minor tail protein 112 3414 3599 4815 303 55989 alignment trimmed tree collapsed 1.355 0.857
4863 207 Phage minor tail protein 3413 3600 134 O157:H7 str. FRIK966 alignment trimmed tree collapsed 0.000 0.455
4864 207 Phage tail length tape-measure protein 1 183 55989 alignment trimmed tree collapsed 0.011 0.898
4865 207 Phage minor tail protein 289 522 M605 alignment trimmed tree collapsed 0.926 0.575
4866 207 Phage minor tail protein 426 55989 alignment trimmed tree collapsed 0.427 0.305
4867 207 Phage tail assembly protein 2 472 55989 alignment trimmed tree collapsed 0.235 0.861
4868 207 Phage tail assembly protein I 1 430 55989 alignment trimmed tree collapsed 0.556 0.155
4869 207 Phage tail fiber protein 311 55989 alignment trimmed tree collapsed 0.617 0.617
4870 207 Attachment invasion locus protein precursor 4924 3704 542 EC4100B alignment trimmed tree collapsed 0.034 0.691
4871 207 hypothetical protein 4147 226 B171 alignment trimmed tree collapsed 0.000 0.294
4872 207 hypothetical protein 1
4873 207 FIG00641818: hypothetical protein 19 55989 alignment trimmed tree collapsed 0.189 0.716
4874 207 Phage tail fiber protein 21 55989 alignment trimmed tree collapsed 0.750 0.524
4875 207 Phage tail fiber assembly protein 254 55989 alignment trimmed tree collapsed 0.081 0.871
4876 207 FIG00639919: hypothetical protein 3147 3484 3855 3856 3865 4047 4108 4238 4274 4297 4336 4678 5068 943 1331 1667 2859 2880 2959 3484 3773 4820 4828 4829 1651 MS 187-1 alignment trimmed tree collapsed 1.106 0.522
4877 207 FIG00639919: hypothetical protein 3854 4829 135 MS 145-7 alignment trimmed tree collapsed 1.134 3.736
4878 207 UPF0098 protein ybhB 939 147 HS alignment trimmed tree collapsed 0.013 0.332
4879 207 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 938 133 2362-75 alignment trimmed tree collapsed 0.000 0.221
4880 207 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 1927 3070 4064 383 938 1238 3274 603 O111:H- str. 11128 alignment trimmed tree collapsed 1.866 1.091
4881 207 Biotin synthase (EC 2.8.1.6) 937 131 EC4100B alignment trimmed tree collapsed 0.000 0.695
4882 207 8-amino-7-oxononanoate synthase (EC 2.3.1.47) 936 132 B088 alignment trimmed tree collapsed 0.043 0.131
4883 207 Biotin synthesis protein bioC 935 175 E110019 alignment trimmed tree collapsed 0.017 0.577
4884 207 Dethiobiotin synthetase (EC 6.3.3.3) 3639 934 3524 251 E24377A alignment trimmed tree collapsed 0.014 0.007
4885 207 Excinuclease ABC subunit B 933 131 O157:H7 EDL933 alignment trimmed tree collapsed 0.000 0.420
4886 207 Hypothetical protein UPF0052 932 134 B str. REL606 alignment trimmed tree collapsed 0.000 0.556
4887 207 Molybdenum cofactor biosynthesis protein MoaA 931 132 E22 alignment trimmed tree collapsed 0.000 0.691
4888 207 Molybdenum cofactor biosynthesis protein MoaB 930 133 O26:H11 str. 11368 alignment trimmed tree collapsed 0.000 1.551
4889 207 Molybdenum cofactor biosynthesis protein MoaC 929 134 H591 alignment trimmed tree collapsed 0.000 0.187
4890 207 Molybdenum cofactor biosynthesis protein MoaD 928 133 55989 alignment trimmed tree collapsed 0.050 0.928
4891 207 hypothetical protein 927 134 FVEC1412 alignment trimmed tree collapsed 0.000 0.435
4892 207 Molybdenum cofactor biosynthesis protein MoaE 927 134 B7A alignment trimmed tree collapsed 0.011 0.604
4893 207 Putative membrane protein 926 132 CFT073 alignment trimmed tree collapsed 0.000 0.133
4894 207 hypothetical protein 925 16 B171 alignment trimmed tree collapsed 0.013 2.646
4895 207 FIG00638277: hypothetical protein 924 119 E22 alignment trimmed tree collapsed 0.053 1.739
4896 207 Inner membrane protein YbhQ 34 MS 119-7 alignment trimmed tree collapsed 0.027 5.120
4897 207 Cardiolipin synthetase (EC 2.7.8.-) 922 133 MS 69-1 alignment trimmed tree collapsed 0.008 0.701
4898 207 Endonuclease/Exonuclease/phosphatase family protein 921 131 TA280 alignment trimmed tree collapsed 0.005 0.680
4899 207 Putative inner membrane protein 920 130 MS 124-1 alignment trimmed tree collapsed 0.000 0.333
4900 207 ABC transport system, permease component YbhR 919 1869 1870 400 1044A alignment trimmed tree collapsed 0.000 0.279
4901 207 ABC transport system, permease component YbhS 918 131 MS 200-1 alignment trimmed tree collapsed 0.000 0.418
4902 207 ABC transporter multidrug efflux pump, fused ATP-binding domains 917 131 IAI1 alignment trimmed tree collapsed 0.016 0.245
4903 207 Predicted membrane fusion protein (MFP) component of efflux pump, membrane anchor protein YbhG 916 157 O157:H7 EDL933 alignment trimmed tree collapsed 0.003 0.426
4904 207 Transcriptional regulator YbiH, TetR family 915 134 042 alignment trimmed tree collapsed 0.024 2.509
4905 207 Transcriptional regulator YbiH, TetR family 915 134 MS 115-1 alignment trimmed tree collapsed 0.017 6.074
4906 207 ATP-dependent RNA helicase RhlE 914 129 E22 alignment trimmed tree collapsed 0.013 0.753
4907 207 DUF 1768 913 73 ATCC 8739 alignment trimmed tree collapsed 0.000 0.300
4908 207 ATP-dependent helicase DinG/Rad3 4930 80 MS 187-1 alignment trimmed tree collapsed 0.000 1.138
4909 207 Anthranilate phosphoribosyltransferase like (EC 2.4.2.18) 4929 133 KO11 alignment trimmed tree collapsed 0.010 0.791
4910 207 Malate dehydrogenase (EC 1.1.1.37) 5222 1693 4928 260 B171 alignment trimmed tree collapsed 0.006 0.776
4911 207 Putative exported protein 1822 4438 4916 455 1831 2361 4927 530 UTI89 alignment trimmed tree collapsed 1.091 1.256
4912 207 Hypothetical Zinc-finger containing protein 114 204 HS alignment trimmed tree collapsed 1.993 0.720
4913 207 Iron-uptake factor PiuC 113 133 55989 alignment trimmed tree collapsed 0.023 0.489
4914 207 Ferrichrome-iron receptor 5274 5717 502 1810 2081 448 WV_060327 alignment trimmed tree collapsed 2.315 1.437
4915 207 FIG00639757: hypothetical protein 18 B171 alignment trimmed tree collapsed 0.000 0.354
4916 207 hypothetical protein 1822 4438 4911 5483 216 455 1831 2361 4927 590 O157:H7 str. EC4196 alignment trimmed tree collapsed 1.184 0.259
4917 207 Ribosomal RNA large subunit methyltransferase F (EC 2.1.1.51) 1832 130 UM146 alignment trimmed tree collapsed 0.010 0.064
4918 207 Potassium efflux system KefA protein / Small-conductance mechanosensitive channel 1833 126 FVEC1302 alignment trimmed tree collapsed 0.012 0.983
4919 207 Glutamate transport ATP-binding protein 1150 1857 2032 2037 2183 2184 2837 3086 3203 3263 3387 3448 4082 4183 4230 4453 4567 4672 4701 4710 4726 5003 5555 5687 4 92 283 530 623 1438 1710 1834 1900 1905 2517 2698 2929 3106 3358 3384 3654 3655 3778 3838 3847 4472 4573 4758 4790 4843 4911 3556 B171 alignment trimmed tree collapsed 0.919 1.457
4920 207 Glutamate transport membrane-spanning protein 3388 3389 3449 4707 4708 5004 284 285 624 1835 2518 3107 3108 3844 1168 CFT073 alignment trimmed tree collapsed 2.374 0.549
4921 207 Glutamine ABC transporter, periplasmic glutamine-binding protein (TC 3.A.1.3.2) 3392 3451 4706 4709 626 1836 3110 3843 3846 650 B185 alignment trimmed tree collapsed 1.878 1.243
4922 207 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) 1837 135 E2348/69 alignment trimmed tree collapsed 0.000 0.091
4923 207 Putative DMT superfamily metabolite efflux protein precursor 3703 99 042 alignment trimmed tree collapsed 0.004 0.074
4924 207 Outer membrane protein X precursor 4870 3704 492 CFT073 alignment trimmed tree collapsed 1.419 1.299
4925 207 Putative integral membrane protein 3705 129 E110019 alignment trimmed tree collapsed 0.016 1.822
4926 207 hypothetical protein 3706 125 M605 alignment trimmed tree collapsed 0.000 0.090
4927 207 Mn-dependent transcriptional regulator MntR 3707 135 E22 alignment trimmed tree collapsed 0.000 0.223
4928 207 Putative membrane protein 3708 130 MS 21-1 alignment trimmed tree collapsed 0.001 0.452
4929 207 Putative membrane protein 3708 131 042 alignment trimmed tree collapsed 0.032 0.656
4930 207 L,D-transpeptidase YbiS 3537 3735 3709 3885 381 O157:H7 EDL933 alignment trimmed tree collapsed 0.558 0.810
4931 207 Putative ATPase component of ABC transporter with duplicated ATPase domain 1919 3263 4265 530 2889 3710 4504 507 O157:H7 str. EC4115 alignment trimmed tree collapsed 2.974 0.816
4932 208 Outer membrane usher protein PmfC 155 MS 115-1 alignment trimmed tree collapsed 0.016 0.741
4933 208 Uncharacterized fimbrial-like protein ygiL precursor 1621 1725 2195 2196 3427 5706 172 593 1669 2127 2149 3365 4213 731 042 alignment trimmed tree collapsed 2.294 1.204
4934 208 Citrate synthase (si) (EC 2.3.3.1) 3013 133 str. K-12 substr. MG1655 alignment trimmed tree collapsed 0.003 0.447
4935 208 hypothetical protein 3014 91 TA271 alignment trimmed tree collapsed 0.056 1.165
4936 208 Succinate dehydrogenase cytochrome b-556 subunit 3015 104 O157:H7 alignment trimmed tree collapsed 0.032 0.655
4937 208 Succinate dehydrogenase hydrophobic membrane anchor protein 3016 132 MS 84-1 alignment trimmed tree collapsed 0.009 2.719
4938 208 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) 3017 131 E2348/69 alignment trimmed tree collapsed 0.000 0.388
4939 208 Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) 853 2673 267 53638 alignment trimmed tree collapsed 1.340 0.728
4940 208 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) 159 KO11 alignment trimmed tree collapsed 0.879 0.453
4941 208 Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) 5675 368 2058 286 MS 119-7 alignment trimmed tree collapsed 1.593 0.882
4942 208 Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) 2057 149 H736 alignment trimmed tree collapsed 0.000 0.348
4943 208 Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) 161 O157:H7 str. FRIK2000 alignment trimmed tree collapsed 0.000 0.471
4944 208 Transcriptional regulator of succinyl CoA synthetase operon 1943 3182 692 1254 1524 2056 412 ETEC H10407 alignment trimmed tree collapsed 2.505 0.074
4945 208 PTS system HrsA EIIA component / PTS system HrsA EIIB component / PTS system HrsA permease IIC component 2055 58 E24377A alignment trimmed tree collapsed 0.005 0.534
4946 208 Alpha-mannosidase (EC 3.2.1.24) 2054 61 MS 107-1 alignment trimmed tree collapsed 0.003 0.228
4947 208 hypothetical protein 62 MS 145-7 alignment trimmed tree collapsed 0.000 0.628
4948 208 Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) 2810 3248 278 MS 116-1 alignment trimmed tree collapsed 0.564 0.646
4949 208 Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) 4585 2809 3247 261 CFT073 alignment trimmed tree collapsed 0.000 0.893
4950 208 Cyd operon protein YbgT 2808 130 1827-70 alignment trimmed tree collapsed 0.000 0.125
4951 208 Protein ybgE 2807 124 O157:H7 str. TW14359 alignment trimmed tree collapsed 0.000 0.302
4952 208 4-hydroxybenzoyl-CoA thioesterase family active site 2806 123 536 alignment trimmed tree collapsed 0.000 0.281
4953 208 MotA/TolQ/ExbB proton channel family protein 2805 123 042 alignment trimmed tree collapsed 0.000 0.581
4954 208 Tol biopolymer transport system, TolR protein 2349 2230 2804 259 MS 175-1 alignment trimmed tree collapsed 1.301 0.950
4955 208 TolA protein 2803 103 M718 alignment trimmed tree collapsed 0.015 0.792
4956 208 tolB protein precursor, periplasmic protein involved in the tonb-independent uptake of group A colicins 2802 109 MS 187-1 alignment trimmed tree collapsed 0.000 0.204
4957 208 18K peptidoglycan-associated outer membrane lipoprotein; Peptidoglycan-associated lipoprotein precursor; Outer membrane protein P6; OmpA/MotB precursor 1628 2182 2801 251 1827-70 alignment trimmed tree collapsed 1.689 1.029
4958 208 TPR repeat containing exported protein; Putative periplasmic protein contains a protein prenylyltransferase domain 113 ED1a alignment trimmed tree collapsed 0.000 0.826
4959 208 Quinolinate synthetase (EC 4.1.99.-) 2713 129 MS 119-7 alignment trimmed tree collapsed 0.000 0.637
4960 208 Ribosyl nicotinamide transporter, PnuC-like 2714 149 DH1 alignment trimmed tree collapsed 0.010 0.368
4961 208 Zinc transporter ZitB 1331 1155 2715 263 MS 21-1 alignment trimmed tree collapsed 0.014 0.285
4962 208 Zinc transporter ZitB 1
4963 208 Probable secreted protein 2716 134 MS 69-1 alignment trimmed tree collapsed 0.008 0.621
4964 208 2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I alpha (EC 2.5.1.54) 3027 3766 2465 2717 4094 379 O157:H7 str. EC4501 alignment trimmed tree collapsed 0.009 0.631
4965 208 Phosphoglycerate mutase (EC 5.4.2.1) 132 E22 alignment trimmed tree collapsed 0.000 0.179
4966 208 Aldose 1-epimerase (EC 5.1.3.3) 128 SMS-3-5 alignment trimmed tree collapsed 0.010 1.025
4967 208 Galactokinase (EC 2.7.1.6) 2201 129 O157:H7 str. FRIK2000 alignment trimmed tree collapsed 0.004 0.777
4968 208 Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10) 2200 129 B7A alignment trimmed tree collapsed 0.003 0.364
4969 208 UDP-N-acetylglucosamine 4-epimerase (EC 5.1.3.7) / UDP-glucose 4-epimerase (EC 5.1.3.2) 1408 3132 4714 1102 2199 2844 3851 636 H591 alignment trimmed tree collapsed 3.625 0.570
4970 208 Putative molybdenum transport ATP-binding protein modF 4807 4312 302 TA271 alignment trimmed tree collapsed 1.741 0.793
4971 208 DNA-binding domain of ModE / Molybdate-binding domain of ModE 131 SMS-3-5 alignment trimmed tree collapsed 0.000 0.528
4972 208 Putative exported protein 2196 132 B171 alignment trimmed tree 0.000 0.000
4973 208 Molybdenum ABC transporter, periplasmic molybdenum-binding protein ModA (TC 3.A.1.8.1) 2195 131 55989 alignment trimmed tree collapsed 0.008 0.643
4974 208 Molybdenum transport system permease protein ModB (TC 3.A.1.8.1) 1066 2839 4185 4451 4703 5626 2 1564 1712 2194 2932 3840 4845 972 B171 alignment trimmed tree collapsed 1.549 1.284
4975 208 Molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1) 2193 130 55989 alignment trimmed tree collapsed 0.012 0.582
4976 208 Putative phosphatase 2192 90 IAI1 alignment trimmed tree collapsed 0.004 1.019
4977 208 6-phosphogluconolactonase (EC 3.1.1.31) 2191 131 W alignment trimmed tree collapsed 0.000 0.930
4978 208 LysR family transcriptional regulator YbhD 5351 2190 4133 210 ATCC 8739 alignment trimmed tree collapsed 2.100 0.776
4979 208 IS1 orfA 106 276 651 728 2110 2318 3196 3500 3908 4477 5065 5199 4747 4813 779 B7A alignment trimmed tree collapsed 0.102 0.077
4980 208 Insertion element IS1 protein insB 105 655 727 2111 2317 2676 3197 4596 4640 5064 426 E110019 alignment trimmed tree collapsed 0.001 0.403
4981 208 Hypothetical protein YbhH, similar to PrpF protein involved in 2-methylcitrate cycle 2189 127 SE15 alignment trimmed tree collapsed 0.009 1.269
4982 208 2-oxoglutarate/malate translocator 5305 395 4444 384 55989 alignment trimmed tree collapsed 0.007 1.301
4983 208 Putative enzyme 440 126 MS 78-1 alignment trimmed tree collapsed 0.002 0.642
4984 208 Pectinesterase (EC 3.1.1.11) 4259 133 W alignment trimmed tree collapsed 0.008 1.234
4985 208 Phage integrase 4577 5408 3044 3394 4258 308 E24377A alignment trimmed tree collapsed 1.383 0.354
4986 208 FIG00640786: hypothetical protein 4257 19 ETEC H10407 alignment trimmed tree collapsed 0.036 0.618
4987 208 FIG00641888: hypothetical protein 4256 12 MS 145-7 alignment trimmed tree collapsed 0.000 1.000
4988 208 Putative membrane protein 4255 41 E24377A alignment trimmed tree collapsed 0.081 0.083
4989 208 Phage protein 4253 173 E110019 alignment trimmed tree collapsed 0.000 0.466
4990 208 unknown protein encoded by prophage CP-933K 4252 118 B7A alignment trimmed tree collapsed 0.052 0.976
4991 208 Phage exonuclease (EC 3.1.11.3); Putative phage-encoded enzyme involved in integration-recombination 156 293 373 4946 112 B354 alignment trimmed tree collapsed 0.032 0.149
4992 208 putative factor; Integration, recombination (Phage or Prophage Related) 142 B185 alignment trimmed tree collapsed 0.009 0.482
4993 208 Host-nuclease inhibitor protein Gam 475 145 O157:H7 alignment trimmed tree collapsed 0.227 0.295
4994 208 prophage Kil protein 160 478 4204 4773 4950 114 E110019 alignment trimmed tree collapsed 1.529 0.378
4995 208 COG2932: Predicted transcriptional regulator 20 55989 alignment trimmed tree collapsed 0.000 0.450
4996 208 COG4197: Uncharacterized protein conserved in bacteria, prophage-related 4202 33 MS 198-1 alignment trimmed tree collapsed 0.013 0.322
4997 208 FIG00639554: hypothetical protein 4201 53 MS 107-1 alignment trimmed tree collapsed 0.033 0.272
4998 208 Replication protein O 48 55989 alignment trimmed tree collapsed 0.044 0.500
4999 208 Phage DNA replication protein P 4199 131 55989 alignment trimmed tree collapsed 0.034 0.185
5000 208 Ren protein 4198 101 55989 alignment trimmed tree collapsed 0.144 0.111
5001 208 Ethidium bromide-methyl viologen resistance protein EmrE 848 3465 2678 4197 4233 283 B088 alignment trimmed tree collapsed 1.503 0.266
5002 209 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) 3239 5585 118 282 509 385 MS 145-7 alignment trimmed tree collapsed 1.259 1.354
5003 209 Glutamate Aspartate transport ATP-binding protein GltL (TC 3.A.1.3.4) 1142 1150 1857 2037 2038 2183 2184 2837 3086 3203 3387 3448 4082 4183 4453 4567 4672 4701 4710 4919 5555 4 92 283 623 1438 1710 1834 1899 1900 2273 2517 3106 3358 3384 3654 3655 3778 3838 3847 4472 4758 4790 4843 3267 MS 182-1 alignment trimmed tree collapsed 1.732 1.128
5004 209 Glutamate Aspartate transport system permease protein GltK (TC 3.A.1.3.4) 1857 3388 3389 3449 4707 4920 284 285 624 1835 2518 3107 3108 3844 1047 SMS-3-5 alignment trimmed tree collapsed 0.000 0.864
5005 209 Glutamate Aspartate transport system permease protein GltJ (TC 3.A.1.3.4) 1856 3388 3449 4920 285 624 1835 2519 3107 662 IAI1 alignment trimmed tree collapsed 1.994 1.209
5006 209 Glutamate Aspartate transport system permease protein GltJ (TC 3.A.1.3.4) 1
5007 209 Glutamate Aspartate periplasmic binding protein precursor GltI (TC 3.A.1.3.4) 286 135 ETEC H10407 alignment trimmed tree 0.000 0.000
5008 209 Glutamate Aspartate periplasmic binding protein precursor GltI (TC 3.A.1.3.4) 3392 3110 263 ETEC H10407 alignment trimmed tree collapsed 1.644 1.158
5009 209 hypothetical protein 2224 93 MS 145-7 alignment trimmed tree collapsed 0.143 0.428
5010 209 Putative membrane protein 2225 70 55989 alignment trimmed tree collapsed 0.087 0.390
5011 209 Putative membrane protein 2225 81 55989 alignment trimmed tree collapsed 0.004 0.024
5012 209 Apolipoprotein N-acyltransferase (EC 2.3.1.-) / Copper homeostasis protein CutE 2226 132 55989 alignment trimmed tree collapsed 0.027 1.911
5013 209 Magnesium and cobalt efflux protein CorC 2227 129 B185 alignment trimmed tree collapsed 0.000 0.125
5014 209 FIG000233: metal-dependent hydrolase 129 55989 alignment trimmed tree collapsed 0.007 0.758
5015 209 Phosphate starvation-inducible ATPase PhoH with RNA binding motif 2113 133 O157:H7 str. Sakai alignment trimmed tree collapsed 0.000 0.443
5016 209 tRNA-i(6)A37 methylthiotransferase 2114 132 536 alignment trimmed tree collapsed 0.000 0.475
5017 209 Putative 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase 2427 2428 2115 4878 4879 395 KO11 alignment trimmed tree collapsed 1.382 0.839
5018 209 Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4) 4017 128 SE11 alignment trimmed tree collapsed 0.006 0.525
5019 209 putative lipoprotein 87 2362-75 alignment trimmed tree collapsed 0.054 1.901
5020 209 Phosphatase NagD predicted to act in N-acetylglucosamine utilization subsystem 4018 133 O157:H7 str. TW14359 alignment trimmed tree collapsed 0.000 0.269
5021 209 N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family 3640 3525 4019 362 MS 146-1 alignment trimmed tree collapsed 1.258 0.717
5022 209 N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family 3640 3525 4019 264 MS 146-1 alignment trimmed tree collapsed 0.041 16.217
5023 209 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) 1717 755 4020 254 55989 alignment trimmed tree collapsed 0.003 0.905
5024 209 Glucosamine-6-phosphate deaminase (EC 3.5.99.6) 4021 133 MS 116-1 alignment trimmed tree collapsed 0.000 0.303
5025 209 hypothetical protein 4022 111 1827-70 alignment trimmed tree collapsed 0.026 0.539
5026 209 PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) 4023 124 M605 alignment trimmed tree collapsed 0.015 0.677
5027 209 Glutaminyl-tRNA synthetase (EC 6.1.1.18) 4024 127 O26:H11 str. 11368 alignment trimmed tree collapsed 0.003 0.663
5028 209 hypothetical protein 4025 36 IAI1 alignment trimmed tree collapsed 0.120 0.592
5029 209 N-acetylglucosamine-regulated outer membrane porin 4026 107 IHE3034 alignment trimmed tree collapsed 0.007 0.238
5030 209 Hypothetical lipoprotein ybfN precursor 4027 134 IAI39 alignment trimmed tree collapsed 0.089 0.130
5031 209 Ferric uptake regulation protein FUR 1085 1999 2916 266 2362-75 alignment trimmed tree collapsed 1.668 0.670
5032 209 Flavodoxin 1 2559 1497 2000 257 042 alignment trimmed tree collapsed 1.141 1.034
5033 209 Uncharacterized protein ybfE 2001 114 E2348/69 alignment trimmed tree collapsed 0.000 0.134
5034 209 Esterase ybfF (EC 3.1.-.-) 2002 114 ETEC H10407 alignment trimmed tree collapsed 0.016 0.687
5035 209 SeqA protein, negative modulator of initiation of replication 2003 124 CFT073 alignment trimmed tree collapsed 0.006 0.607
5036 209 Phosphoglucomutase (EC 5.4.2.2) 2004 125 E24377A alignment trimmed tree collapsed 0.004 0.001
5037 209 Putrescine/proton symporter, putrescine/ornithine antiporter PotE 1161 785 1944 2005 372 MS 182-1 alignment trimmed tree collapsed 1.927 1.336
5038 209 Ornithine decarboxylase (EC 4.1.1.17) 2498 638 2006 261 IAI1 alignment trimmed tree collapsed 0.017 1.238
5039 209 FIG00641539: hypothetical protein 23 SE11 alignment trimmed tree collapsed 0.000 0.373
5040 209 DNA-binding response regulator KdpE 817 820 1159 1980 2084 2102 3161 3503 3655 4458 5082 5259 265 467 1455 1706 1775 2034 2037 2248 2332 2397 3308 3432 3539 3583 3748 1790 EC4100B alignment trimmed tree collapsed 2.057 1.043
5041 209 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) 1776 133 KO11 alignment trimmed tree collapsed 0.013 0.786
5042 209 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) 3 KO11 alignment trimmed tree collapsed 0.019 0.477
5043 209 Potassium-transporting ATPase C chain (EC 3.6.3.12) (TC 3.A.3.7.1) 1777 129 E2348/69 alignment trimmed tree collapsed 0.063 2.338
5044 209 Potassium-transporting ATPase B chain (EC 3.6.3.12) (TC 3.A.3.7.1) 128 O157:H7 str. EC4115 alignment trimmed tree collapsed 0.002 0.098
5045 209 Potassium-transporting ATPase A chain (EC 3.6.3.12) (TC 3.A.3.7.1) 1779 133 042 alignment trimmed tree collapsed 0.007 0.680
5046 209 Potassium-transporting ATPase A chain (EC 3.6.3.12) (TC 3.A.3.7.1) 1779 126 MS 78-1 alignment trimmed tree collapsed 0.033 0.049
5047 209 hypothetical protein 1780 121 MS 119-7 alignment trimmed tree collapsed 0.021 1.645
5048 209 Putative exported protein 3551 132 MS 187-1 alignment trimmed tree collapsed 0.032 0.621
5049 209 core protein 316 55989 alignment trimmed tree collapsed 0.046 0.572
5050 209 core protein 63 O103:H2 str. 12009 alignment trimmed tree collapsed 0.017 1.616
5051 209 orf, hypothetical protein 76 55989 alignment trimmed tree collapsed 0.000 0.003
5052 209 Transposase 5249 5528 4804 325 EC4100B alignment trimmed tree collapsed 0.066 0.393
5053 209 Transposase 4204 5249 5528 5530 4804 352 str. K-12 substr. MG1655 alignment trimmed tree collapsed 0.000 0.458
5054 209 FIG143828: Hypothetical protein YbgA 145 MS 107-1 alignment trimmed tree collapsed 0.074 0.367
5055 209 Deoxyribodipyrimidine photolyase (EC 4.1.99.3) 2125 131 E24377A alignment trimmed tree collapsed 0.013 0.812
5056 209 Di/tripeptide permease YbgH 1179 2121 2124 4125 4163 382 MS 78-1 alignment trimmed tree collapsed 1.896 0.826
5057 209 FIG042796: Hypothetical protein 2123 133 MS 185-1 alignment trimmed tree collapsed 0.000 0.146
5058 209 Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54) 2122 130 O157:H7 str. EC869 alignment trimmed tree collapsed 0.000 0.619
5059 209 Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54) 2121 135 IAI1 alignment trimmed tree collapsed 0.004 0.083
5060 209 Lactam utilization protein LamB 2120 132 TA271 alignment trimmed tree collapsed 0.051 0.156
5061 209 Endonuclease VIII 1512 2119 2583 252 55989 alignment trimmed tree collapsed 2.220 1.150
5062 209 Putative transport protein 2118 128 HS alignment trimmed tree collapsed 0.012 0.733
5063 209 hypothetical protein 2199 2117 4210 187 B171 alignment trimmed tree collapsed 1.365 0.937
5064 210 Insertion element IS1 protein insB 105 655 727 2111 2317 2676 3197 4596 4640 4980 426 E110019 alignment trimmed tree collapsed 1.579 0.404
5065 210 IS1 orfA 106 276 651 728 2110 2318 3196 3500 3908 4477 4979 5199 4747 4813 779 53638 alignment trimmed tree collapsed 0.053 0.325
5066 210 Alkaline phosphatase (EC 3.1.3.1) 1182 131 O157:H7 alignment trimmed tree collapsed 0.013 1.042
5067 210 Phosphate starvation-inducible protein PsiF 1181 132 O157:H7 EDL933 alignment trimmed tree collapsed 0.000 0.318
5068 210 Protein YaiC 125 O103:H2 str. 12009 alignment trimmed tree collapsed 0.009 0.256
5069 210 Pyrroline-5-carboxylate reductase (EC 1.5.1.2) 480 133 CFT073 alignment trimmed tree collapsed 0.004 0.661
5070 210 Protein YaiI 479 130 E24377A alignment trimmed tree collapsed 0.000 0.524
5071 210 Shikimate kinase III (EC 2.7.1.71) 1959 478 1474 258 O157:H7 EDL933 alignment trimmed tree collapsed 1.502 0.254
5072 210 Protein YaiA 477 133 MS 21-1 alignment trimmed tree collapsed 0.000 0.367
5073 210 AroM protein 476 133 B7A alignment trimmed tree collapsed 0.000 0.612
5074 210 Cytoplasmic protein YaiE 475 132 CFT073 alignment trimmed tree collapsed 0.000 0.218
5075 210 hypothetical protein 474 40 O55:H7 str. CB9615 alignment trimmed tree collapsed 0.000 0.352
5076 210 DNA recombination-dependent growth factor C 473 134 101-1 alignment trimmed tree collapsed 0.000 0.162
5077 210 ROK family Glucokinase with ambiguous substrate specificity 4446 448 472 367 55989 alignment trimmed tree collapsed 1.648 0.616
5078 210 FIG00637870: hypothetical protein 471 47 O157:H7 str. TW14359 alignment trimmed tree collapsed 0.033 0.203
5079 210 Protein AraJ precursor 3713 470 1863 2873 362 B088 alignment trimmed tree collapsed 1.508 0.318
5080 210 Exonuclease SbcC 469 130 SE11 alignment trimmed tree collapsed 0.040 1.121
5081 210 Exonuclease SbcD 468 130 55989 alignment trimmed tree collapsed 0.023 0.214
5082 210 Phosphate regulon transcriptional regulatory protein PhoB (SphR) 817 820 1159 1980 2084 2102 3161 3503 3655 4458 5040 5259 265 467 1455 1706 1775 2034 2037 2248 2332 2397 3308 3432 3539 3583 3748 1793 B7A alignment trimmed tree collapsed 1.612 1.892
5083 210 Phosphate regulon sensor protein PhoR (SphS) (EC 2.7.13.3) 466 129 EC4100B alignment trimmed tree collapsed 0.008 1.339
5084 210 hypothetical protein 465 122 O157:H7 str. FRIK966 alignment trimmed tree collapsed 0.000 0.282
5085 210 Branched-chain amino acid transport system carrier protein 464 133 55989 alignment trimmed tree collapsed 0.005 2.115
5086 210 Proline-specific permease proY 907 1416 4197 5264 5672 365 1094 1822 1965 2327 3233 903 B354 alignment trimmed tree collapsed 2.241 0.846
5087 210 Maltodextrin glucosidase (EC 3.2.1.20) 974 131 MS 107-1 alignment trimmed tree collapsed 0.020 0.216
5088 210 Acyl carrier protein phosphodiesterase (EC 3.1.4.14) 975 128 042 alignment trimmed tree collapsed 0.006 0.463
5089 210 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) 976 128 MS 124-1 alignment trimmed tree collapsed 0.009 0.200
5090 210 tRNA-guanine transglycosylase (EC 2.4.2.29) 977 133 O157:H7 alignment trimmed tree collapsed 0.000 0.176
5091 210 Preprotein translocase subunit YajC (TC 3.A.5.1.1) 978 133 E2348/69 alignment trimmed tree collapsed 0.000 0.090
5092 210 Protein-export membrane protein SecD (TC 3.A.5.1.1) 979 132 E110019 alignment trimmed tree collapsed 0.002 0.472
5093 210 Protein-export membrane protein SecF (TC 3.A.5.1.1) 980 133 CFT073 alignment trimmed tree collapsed 0.000 0.342
5094 210 hypothetical protein 981 133 CFT073 alignment trimmed tree collapsed 0.000 0.329
5095 210 Nucleoside-specific channel-forming protein Tsx precursor 982 131 SE15 alignment trimmed tree collapsed 0.000 0.106
5096 210 Hypothetical lipoprotein yajI 983 127 HS alignment trimmed tree collapsed 0.000 0.525
5097 210 Hypothetical lipoprotein yajI 983 131 O157:H7 str. EC869 alignment trimmed tree collapsed 0.000 0.577
5098 210 Ribonucleotide reductase transcriptional regulator NrdR 984 99 E110019 alignment trimmed tree collapsed 0.008 0.707
5099 210 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) 2989 985 2627 264 B354 alignment trimmed tree collapsed 1.176 0.603
5100 210 Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC 3.5.4.26) / 5-amino-6-(5-phosphoribosylamino)uracil reductase (EC 1.1.1.193) 985 134 55989 alignment trimmed tree collapsed 0.034 0.201
5101 210 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.9) 986 133 CFT073 alignment trimmed tree collapsed 0.000 0.236
5102 210 Transcription termination protein NusB 987 133 FVEC1302 alignment trimmed tree collapsed 0.000 0.087
5103 210 Thiamine-monophosphate kinase (EC 2.7.4.16) 988 132 53638 alignment trimmed tree collapsed 0.003 0.339
5104 210 Phosphatidylglycerophosphatase A (EC 3.1.3.27) 989 124 ATCC 8739 alignment trimmed tree collapsed 0.007 0.654
5105 210 Putative oxidoreductase 2346 2730 3700 4143 5557 605 960 990 3627 4341 4646 933 B088 alignment trimmed tree collapsed 2.396 1.543
5106 210 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) 991 127 55989 alignment trimmed tree collapsed 0.005 1.173
5107 210 Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) 992 133 ATCC 8739 alignment trimmed tree collapsed 0.010 0.361
5108 210 Exodeoxyribonuclease VII small subunit (EC 3.1.11.6) 993 132 O157:H7 str. EC4113 alignment trimmed tree collapsed 0.013 0.237
5109 210 Thiamine biosynthesis protein thiI 995 131 O157:H7 EDL933 alignment trimmed tree collapsed 0.005 0.663
5110 210 Protein ThiJ 996 133 IHE3034 alignment trimmed tree collapsed 0.006 0.719
5111 210 2-dehydropantoate 2-reductase (EC 1.1.1.169) 997 130 B7A alignment trimmed tree collapsed 0.010 0.395
5112 210 UPF0234 protein YajQ 998 132 APEC O1 alignment trimmed tree collapsed 0.000 0.198
5113 210 Putative transport protein 113 APEC O1 alignment trimmed tree collapsed 0.005 1.703
5114 210 FIG00639056: hypothetical protein 2893 35 55989 alignment trimmed tree collapsed 0.000 0.157
5115 210 orf, conserved hypothetical protein 1
5116 210 orf, conserved hypothetical protein 2895 92 B088 alignment trimmed tree collapsed 0.000 0.692
5117 210 Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB 2896 128 ATCC 8739 alignment trimmed tree collapsed 0.000 0.394
5118 210 Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-) 2897 133 O157:H7 alignment trimmed tree collapsed 0.001 0.504
5119 210 Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) 2898 114 M605 alignment trimmed tree collapsed 0.000 0.649
5120 210 Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-) 2899 127 CFT073 alignment trimmed tree collapsed 0.000 0.306
5121 210 Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) 2900 122 E24377A alignment trimmed tree collapsed 0.020 0.367
5122 210 AmpG permease 2901 114 MS 198-1 alignment trimmed tree collapsed 0.003 1.166
5123 210 Hypothetical lipoprotein YajG precursor 2902 111 042 alignment trimmed tree collapsed 0.005 1.813
5124 210 Cell division protein BolA 2903 120 ATCC 8739 alignment trimmed tree collapsed 0.000 0.130
5125 210 hypothetical protein 2904 115 HS alignment trimmed tree collapsed 0.017 1.441
5126 210 Cell division trigger factor (EC 5.2.1.8) 121 K12 alignment trimmed tree collapsed 0.000 0.451
5127 210 ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) 3603 122 O157:H7 str. EC4196 alignment trimmed tree collapsed 0.000 0.129
5128 210 ATP-dependent Clp protease ATP-binding subunit ClpX 1389 117 536 alignment trimmed tree collapsed 0.000 0.179
5129 210 ATP-dependent protease La (EC 3.4.21.53) Type I 1390 131 BL21(DE3) alignment trimmed tree collapsed 0.137 11.205
5130 210 ATP-dependent protease La (EC 3.4.21.53) Type I 1390 129 BL21(DE3) alignment trimmed tree collapsed 0.001 1.480
5131 210 DNA-binding protein HU-beta 1029 3774 4763 843 1391 1615 3457 529 53638 alignment trimmed tree collapsed 1.436 1.363
5132 210 Peptidyl-prolyl cis-trans isomerase ppiD (EC 5.2.1.8) 1392 126 EC4100B alignment trimmed tree collapsed 0.006 0.339
5133 210 Putative exported protein 1393 133 TA206 alignment trimmed tree collapsed 0.008 1.026
5134 210 4-hydroxybenzoyl-CoA thioesterase family active site 4952 1394 2806 254 101-1 alignment trimmed tree collapsed 1.617 1.098
5135 210 Queuosine Biosynthesis QueC ATPase 1395 133 55989 alignment trimmed tree collapsed 0.014 1.170
5136 210 Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) 5629 1396 1561 263 IAI39 alignment trimmed tree collapsed 1.884 0.376
5137 210 putative peptide transport system secreted peptide-binding protein 5629 1396 1561 269 1827-70 alignment trimmed tree collapsed 1.362 0.547
5138 210 Cof protein, HD superfamily hydrolase 1239 4976 809 1397 2192 391 55989 alignment trimmed tree collapsed 0.008 0.511
5139 210 Putative HTH-type transcriptional regulator ybaO 4736 421 1399 260 MS 116-1 alignment trimmed tree collapsed 1.075 1.012
5140 210 Putative HTH-type transcriptional regulator ybaO 4736 421 1399 264 MS 187-1 alignment trimmed tree collapsed 1.528 0.191
5141 210 ATP-binding component of a transport system 3512 4732 4733 4765 5142 418 419 1400 1401 2564 3291 638 55989 alignment trimmed tree collapsed 2.260 0.522
5142 210 Multidrug resistance-like ATP-binding protein mdlB 4765 5141 1400 1401 2564 382 CFT073 alignment trimmed tree collapsed 1.981 0.199
5143 210 conserved hypothetical protein 103 O26:H11 str. 11368 alignment trimmed tree collapsed 0.000 0.543
5144 210 Nitrogen regulatory protein P-II 2983 1402 2621 266 E2348/69 alignment trimmed tree collapsed 0.428 0.799
5145 210 Ammonium transporter 1403 131 1827-70 alignment trimmed tree collapsed 0.008 0.683
5146 210 Acyl-CoA thioesterase II (EC 3.1.2.-) 1404 129 O157:H7 str. FRIK966 alignment trimmed tree collapsed 0.000 0.555
5147 210 Glycoprotein-polysaccharide metabolism 1405 130 E110019 alignment trimmed tree collapsed 0.006 0.316
5148 210 methylated-DNA--protein-cysteine methyltransferase-related protein 3297 4101 561 1337 1406 396 O157:H7 str. EC4486 alignment trimmed tree collapsed 1.581 1.354
5149 210 RNA signal recognition particle 4.5S RNA 1407 131 MS 146-1 alignment trimmed tree collapsed 0.000 0.470
5150 210 Uncharacterized protein ylaB 1103 1408 2105 260 MS 124-1 alignment trimmed tree collapsed 1.378 0.836
5151 210 Putative inner membrane protein 1409 132 O157:H7 EDL933 alignment trimmed tree collapsed 0.000 0.304
5152 210 Maltose O-acetyltransferase (EC 2.3.1.79) 3133 4187 5355 1410 2843 4137 415 TA280 alignment trimmed tree collapsed 0.010 0.619
5153 210 Maltose O-acetyltransferase (EC 2.3.1.79) 5355 1410 4137 249 TA143 alignment trimmed tree collapsed 0.000 1.037
5154 210 Haemolysin expression modulating protein 524 2273 3675 1081 1411 3945 327 CFT073 alignment trimmed tree collapsed 1.097 0.854
5155 210 Putative cytoplasmic protein 1412 131 MS 116-1 alignment trimmed tree collapsed 0.000 0.108
5156 210 RND efflux system, inner membrane transporter CmeB 1852 2143 3158 268 957 2522 3438 4416 826 MS 84-1 alignment trimmed tree collapsed 0.740 0.908
5157 210 RND efflux system, membrane fusion protein CmeA 1851 958 2523 247 55989 alignment trimmed tree collapsed 0.420 0.159
5158 210 Transcription repressor of multidrug efflux pump acrAB operon, TetR (AcrR) family 1850 959 968 249 str. K-12 substr. MG1655 alignment trimmed tree collapsed 1.311 1.046
5159 210 Potassium efflux system KefA protein / Small-conductance mechanosensitive channel 125 55989 alignment trimmed tree collapsed 0.003 0.181
5160 210 Potassium efflux system KefA protein / Small-conductance mechanosensitive channel 859 2667 3211 265 1044A alignment trimmed tree collapsed 0.000 0.785
5161 210 Putative inner membrane protein 3212 132 83972 alignment trimmed tree collapsed 0.019 0.679
5162 210 Primosomal replication protein N prime prime 3213 134 ATCC 8739 alignment trimmed tree collapsed 0.023 0.186
5163 210 Hypothetical protein DUF454 3214 133 O157:H7 str. EC869 alignment trimmed tree collapsed 0.000 0.293
5164 210 Adenine phosphoribosyltransferase (EC 2.4.2.7) 3215 133 E2348/69 alignment trimmed tree collapsed 0.000 0.265
5165 210 DNA polymerase III subunits gamma and tau (EC 2.7.7.7) 3216 123 E2348/69 alignment trimmed tree collapsed 0.005 0.549
5166 210 FIG000557: hypothetical protein co-occurring with RecR 3217 132 B171 alignment trimmed tree collapsed 0.000 0.179
5167 210 Recombination protein RecR 3218 132 1827-70 alignment trimmed tree collapsed 0.000 0.041
5168 210 Recombination protein RecR 3218 133 1827-70 alignment trimmed tree collapsed 0.016 5.257
5169 210 Chaperone protein HtpG 3219 131 H736 alignment trimmed tree collapsed 0.003 0.704
5170 210 FIG00638766: hypothetical protein 3220 32 55989 alignment trimmed tree collapsed 0.027 1.890
5171 210 Adenylate kinase (EC 2.7.4.3) 3221 133 O157:H7 str. FRIK966 alignment trimmed tree collapsed 0.009 0.737
5172 210 Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1) 3222 134 MS 107-1 alignment trimmed tree collapsed 0.007 0.011
5173 210 Acetyl esterase (EC 3.1.1.-) 3223 132 B088 alignment trimmed tree collapsed 0.014 0.419
5174 210 Inosine-guanosine kinase (EC 2.7.1.73) 3224 131 B str. REL606 alignment trimmed tree collapsed 0.000 0.143
5175 210 POTASSIUM/PROTON ANTIPORTER ROSB 3225 132 E22 alignment trimmed tree collapsed 0.052 1.413
5176 210 POTASSIUM/PROTON ANTIPORTER ROSB 3225 132 MS 84-1 alignment trimmed tree collapsed 0.000 0.101
5177 210 Fosmidomycin resistance protein 3226 130 55989 alignment trimmed tree collapsed 0.006 1.675
5178 210 UDP-sugar hydrolase (EC 3.6.1.45); 5'-nucleotidase (EC 3.1.3.5) 3227 133 E22 alignment trimmed tree collapsed 1.560 0.178
5179 210 YbaK family protein 3228 127 E110019 alignment trimmed tree collapsed 0.000 0.880
5180 210 Putative ligase 3229 129 E24377A alignment trimmed tree collapsed 0.000 1.156
5181 210 HigA protein (antitoxin to HigB) 3230 115 E2348/69 alignment trimmed tree collapsed 0.026 1.754
5182 210 Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) 3231 125 MS 84-1 alignment trimmed tree collapsed 0.009 0.421
5183 210 Glutaminase (EC 3.5.1.2) 126 MS 119-7 alignment trimmed tree collapsed 0.026 0.153
5184 210 Inner membrane transport protein YbaT 3233 131 MS 185-1 alignment trimmed tree collapsed 0.142 11.317
5185 210 Inner membrane transport protein YbaT 5086 3233 265 BW2952 alignment trimmed tree collapsed 1.692 0.089
5186 210 HTH-type transcriptional regulator cueR 147 1105 1872 1054 2107 3082 3234 413 1827-70 alignment trimmed tree collapsed 0.007 0.775
5187 210 Putative activity regulator of membrane protease YbbK 3235 132 W alignment trimmed tree collapsed 0.000 0.157
5188 210 Putative stomatin/prohibitin-family membrane protease subunit YbbK 871 3236 4043 272 APEC O1 alignment trimmed tree collapsed 0.245 0.149
5189 210 YbbL ABC transporter ATP-binding protein 632 1781 2032 2183 2837 3203 3295 3512 3823 3949 4183 4453 4567 4726 4765 4790 4919 5141 5142 5279 5380 4 310 559 866 1400 1401 1710 1802 1815 1834 1905 2564 2709 2929 2977 3162 3237 3291 3384 3654 4472 4573 4843 3063 B7A alignment trimmed tree collapsed 2.437 0.068
5190 210 YbbM seven transmembrane helix protein 3238 128 ATCC 8739 alignment trimmed tree collapsed 0.004 1.336
5191 210 COG3118: Thioredoxin domain-containing protein EC-YbbN 3239 130 B171 alignment trimmed tree collapsed 0.004 0.639
5192 210 Putative NAD(P)-dependent oxidoreductase EC-YbbO 3240 129 53638 alignment trimmed tree collapsed 0.008 0.958
5193 210 Arylesterase precursor (EC 3.1.1.2) 3241 123 E22 alignment trimmed tree collapsed 0.000 0.646
5194 210 Uncharacterized metabolite ABC transporter in Enterobacteriaceae, ATP-binding protein EC-YbbA 1150 1857 2048 2065 2183 2837 3086 3203 3263 3387 3448 4052 4230 4231 4444 4566 4567 4672 4701 4710 4726 4732 4790 4902 4919 5003 5555 4 92 283 418 450 530 623 917 1802 1834 1873 1890 2517 2697 2698 3106 3242 3286 3383 3384 3654 3778 3838 3847 4472 4573 4758 4790 3743 101-1 alignment trimmed tree collapsed 2.762 0.920
5195 210 Uncharacterized metabolite ABC transporter in Enterobacteriaceae, permease protein EC-YbbP 3243 128 E24377A alignment trimmed tree collapsed 0.014 0.109
5196 210 Uncharacterized metabolite ABC transporter in Enterobacteriaceae, permease protein EC-YbbP 3243 131 B088 alignment trimmed tree collapsed 0.006 0.700
5197 210 core protein 1
5198 210 core protein 104 E24377A alignment trimmed tree collapsed 0.036 1.915
5199 210 InsA protein (Fragment) 106 276 651 728 2110 2318 3196 3500 3908 4477 4979 5065 4747 4813 779 53638 alignment trimmed tree collapsed 0.053 0.325
5200 210 truncated InsB 3 042 alignment trimmed tree collapsed 0.665 1.414
5201 210 IS1 ORF 105 655 727 1679 2111 2317 2676 3197 4596 4640 4980 5064 907 E110019 alignment trimmed tree collapsed 0.001 0.388
5202 210 FIG00637923: hypothetical protein 4883 36 str. K-12 substr. DH10B alignment trimmed tree collapsed 0.000 0.246
5203 210 core protein 5526 4802 101 55989 alignment trimmed tree collapsed 0.780 0.055
5204 210 FIG00638751: hypothetical protein 4885 11 W alignment trimmed tree collapsed 0.054 0.162
5205 210 FIG00639579: hypothetical protein 4886 8 55989 alignment trimmed tree 0.000 0.000
5206 210 FIG00639248: hypothetical protein 4887 9 IAI1 alignment trimmed tree collapsed 0.000 0.354
5207 210 Selenophosphate-dependent tRNA 2-selenouridine synthase 4888 129 IAI1 alignment trimmed tree collapsed 0.040 0.080
5208 210 DNA-binding transcriptional activator of the allD operon 4889 132 O157:H7 str. EC4045 alignment trimmed tree collapsed 0.000 0.177
5209 210 DNA-binding transcriptional activator of the allD operon 2965 3590 3715 5465 1285 1861 2605 3951 4889 795 E22 alignment trimmed tree collapsed 1.734 0.432
5210 210 Ureidoglycolate hydrolase (EC 3.5.3.19) 4890 129 B171 alignment trimmed tree collapsed 0.013 0.831
5211 210 Negative regulator of allantoin and glyoxylate utilization operons 1046 1654 2951 3267 4891 515 SMS-3-5 alignment trimmed tree collapsed 1.093 0.834
5212 210 Glyoxylate carboligase (EC 4.1.1.47) 4892 150 IAI1 alignment trimmed tree collapsed 0.004 0.290
5213 210 Hydroxypyruvate isomerase (EC 5.3.1.22) 2609 3202 4893 229 SE11 alignment trimmed tree collapsed 0.000 0.916
5214 210 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) 1704 2606 668 742 3205 499 B171 alignment trimmed tree collapsed 0.004 0.291
5215 210 Allantoin permease 1687 100 E24377A alignment trimmed tree collapsed 0.004 0.601
5216 210 Allantoinase (EC 3.5.2.5) 2535 583 1688 236 MS 107-1 alignment trimmed tree collapsed 0.017 1.051
5217 210 Xanthine permease 1689 133 O157:H7 str. EC4042 alignment trimmed tree collapsed 0.007 1.946
5218 210 Putative purine permease ybbY 1535 1689 2723 262 E110019 alignment trimmed tree collapsed 0.005 1.124
5219 210 Glycerate kinase (EC 2.7.1.31) 1703 741 1690 275 E24377A alignment trimmed tree collapsed 0.000 0.208
5220 210 Ureidoglycine aminohydrolase 1691 134 IAI1 alignment trimmed tree collapsed 0.009 1.375
5221 210 Allantoate amidohydrolase (EC 3.5.3.9) 1692 122 55989 alignment trimmed tree collapsed 0.005 0.138
5222 210 Ureidoglycolate dehydrogenase (EC 1.1.1.154) 4910 1693 4928 176 KO11 alignment trimmed tree collapsed 0.012 0.533
5223 210 Protein fdrA 1694 132 55989 alignment trimmed tree collapsed 0.016 0.546
5224 210 Putative cytoplasmic protein 5470 205 266 55989 alignment trimmed tree collapsed 1.180 0.185
5225 210 Putative cytoplasmic protein 1696 132 ETEC H10407 alignment trimmed tree collapsed 0.006 0.655
5226 210 Putative cytoplasmic protein 1696 134 042 alignment trimmed tree collapsed 0.017 1.692
5227 210 Carbamate kinase (EC 2.7.2.2) 2536 5471 206 582 1697 459 TA280 alignment trimmed tree collapsed 1.538 0.951
5228 210 Phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21) 132 55989 alignment trimmed tree collapsed 0.029 0.741
5229 210 Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) 227 134 042 alignment trimmed tree collapsed 0.000 0.489
5230 210 UDP-2,3-diacylglucosamine hydrolase (EC 3.6.1.-) 228 124 IAI1 alignment trimmed tree collapsed 0.009 0.842
5231 210 Peptidyl-prolyl cis-trans isomerase ppiB (EC 5.2.1.8) 1930 229 1242 263 KO11 alignment trimmed tree collapsed 0.018 0.740
5232 210 Cysteinyl-tRNA synthetase (EC 6.1.1.16) 230 109 55989 alignment trimmed tree collapsed 0.000 0.783
5233 210 Putative membrane-bound metal-dependent hydrolases 231 115 042 alignment trimmed tree collapsed 0.006 0.008
5234 210 FIG002958: hypothetical protein 232 133 APEC O1 alignment trimmed tree collapsed 0.000 0.415
5235 210 Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) / Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) 233 133 O26:H11 str. 11368 alignment trimmed tree collapsed 0.004 2.273
5236 210 Fimbriae-like adhesin SfmA 1621 2191 2195 3192 3427 4255 4258 4801 4933 234 593 1514 1599 1602 2127 2149 3365 3661 4318 1169 O157:H7 str. EC4486 alignment trimmed tree collapsed 1.558 1.427
5237 210 Fimbrial periplasmic chaperone SfmC 1620 1726 2194 3191 4257 4796 4802 5704 171 235 1515 1601 2150 3364 4317 4744 4926 1235 55989 alignment trimmed tree collapsed 1.967 1.268
5238 210 Outer membrane usher protein SfmD 236 3363 215 55989 alignment trimmed tree collapsed 0.010 0.896
5239 210 hypothetical protein 9 E24377A alignment trimmed tree collapsed 0.027 0.459
5240 210 Fimbriae-like adhesin SfmH 237 101 55989 alignment trimmed tree collapsed 0.013 0.195
5241 210 Fimbriae-like periplasmic protein SfmF 4933 238 2127 159 E22 alignment trimmed tree collapsed 0.044 0.713
5242 210 Transcriptional regulator of fimbriae expression FimZ (LuxR/UhpA family) 1553 2783 3303 3445 239 540 566 675 2394 753 E24377A alignment trimmed tree collapsed 2.309 0.062
5243 210 hypothetical protein 240 37 TA271 alignment trimmed tree collapsed 0.000 1.283
5244 210 Porin thermoregulatory protein envY 1162 241 784 232 B171 alignment trimmed tree collapsed 0.004 0.084
5245 210 hypothetical protein 242 125 55989 alignment trimmed tree collapsed 0.018 0.028
5246 210 Bacteriophage N4 adsorption protein A precursor 243 127 53638 alignment trimmed tree collapsed 0.007 0.795
5247 210 Bacteriophage N4 adsorption protein A precursor 243 121 55989 alignment trimmed tree collapsed 0.014 0.775
5248 210 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 97 O157:H7 str. EC4024 alignment trimmed tree collapsed 0.007 1.176
5249 210 Transposase 165 55989 alignment trimmed tree collapsed 0.008 0.458
5250 210 Rhs-family protein 16 55989 alignment trimmed tree 0.000 0.000
5251 210 unknown function 1684 32 MS 124-1 alignment trimmed tree collapsed 0.014 0.378
5252 210 Rhs core protein with extension 9 55989 alignment trimmed tree collapsed 0.024 0.409
5253 210 Rhs core protein with extension 5525 4522 87 55989 alignment trimmed tree collapsed 1.791 0.634
5254 210 COG3209: Rhs family protein 57 O111:H- str. 11128 alignment trimmed tree collapsed 0.020 0.082
5255 210 COG3209: Rhs family protein 58 MS 124-1 alignment trimmed tree collapsed 0.024 0.684
5256 210 hypothetical protein 1531 70 H591 alignment trimmed tree collapsed 0.014 0.141
5257 210 VgrG protein 79 55989 alignment trimmed tree collapsed 0.016 0.560
5258 210 Copper sensory histidine kinase CusS 2103 2333 3431 139 55989 alignment trimmed tree collapsed 0.038 0.217
5259 210 Copper-sensing two-component system response regulator CusR 817 820 1159 1980 2084 2102 3161 3503 3655 4458 5040 5082 265 467 1455 1706 1775 2034 2037 2248 2332 2397 3308 3432 3539 3583 3748 1793 CFT073 alignment trimmed tree collapsed 1.597 1.218
5260 210 Cation efflux system protein CusC precursor 2101 3213 2285 2331 3434 4462 458 SE11 alignment trimmed tree collapsed 2.435 0.197
5261 210 Cation efflux system protein CusF precursor 2100 2330 3435 146 KO11 alignment trimmed tree collapsed 0.018 0.281
5262 210 Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family 2329 141 55989 alignment trimmed tree collapsed 0.015 0.206
5263 210 Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA 1852 2143 2328 2522 3438 4416 660 55989 alignment trimmed tree collapsed 2.676 1.502
5264 210 Phenylalanine-specific permease 907 1416 3071 5672 365 1094 1965 2327 3294 678 SE15 alignment trimmed tree collapsed 1.712 0.963
5265 210 Uncharacterized protein ybdG 2326 126 APEC O1 alignment trimmed tree collapsed 0.006 0.087
5266 210 Oxygen-insensitive NAD(P)H nitroreductase (EC 1.-.-.-) / Dihydropteridine reductase (EC 1.5.1.34) 2325 132 O111:H- str. 11128 alignment trimmed tree collapsed 0.015 0.934
5267 210 Putative cytoplasmic protein 2324 128 ETEC H10407 alignment trimmed tree collapsed 0.000 0.156
5268 210 Putative inner membrane protein 2323 133 IAI39 alignment trimmed tree collapsed 0.000 0.389
5269 210 hypothetical protein 2322 129 55989 alignment trimmed tree collapsed 0.017 1.030
5270 210 HokE protein 2642 5272 299 O157:H7 EDL933 alignment trimmed tree collapsed 0.042 0.220
5271 210 hypothetical protein 11 KO11 alignment trimmed tree collapsed 0.039 0.052
5272 210 HokE protein 2642 5270 355 O157:H7 EDL933 alignment trimmed tree collapsed 0.250 0.579
5273 210 4'-phosphopantetheinyl transferase (EC 2.7.8.-) [enterobactin] siderophore 1809 134 E110019 alignment trimmed tree collapsed 0.099 0.456
5274 210 COG4771: Outer membrane receptor for ferrienterochelin and colicins 3523 4914 1810 4207 310 O111:H- str. 11128 alignment trimmed tree collapsed 1.771 0.807
5275 210 Enterobactin esterase 1811 121 MS 145-7 alignment trimmed tree collapsed 0.019 0.891
5276 210 FIG005032: Putative cytoplasmic protein YbdZ in enterobactin biosynthesis operon 1812 135 B088 alignment trimmed tree collapsed 0.029 0.897
5277 210 Enterobactin synthetase component F, serine activating enzyme (EC 2.7.7.-) 1813 128 H591 alignment trimmed tree collapsed 0.005 0.272
5278 210 Ferric enterobactin uptake protein FepE 1105 1814 258 55989 alignment trimmed tree collapsed 2.702 0.189
5279 210 Ferric enterobactin transport ATP-binding protein FepC (TC 3.A.1.14.2) 926 1781 5718 835 866 1815 2082 671 BL21(DE3) alignment trimmed tree collapsed 2.298 1.426
5280 210 Ferric enterobactin transport system permease protein FepG (TC 3.A.1.14.2) 245 UTI89 alignment trimmed tree collapsed 1.665 0.791
5281 210 Ferric enterobactin transport system permease protein FepD (TC 3.A.1.14.2) 5280 1817 364 MS 124-1 alignment trimmed tree collapsed 1.357 0.605
5282 210 Enterobactin exporter EntS 1818 133 TA280 alignment trimmed tree collapsed 0.009 0.755
5283 210 Ferric enterobactin-binding periplasmic protein FepB (TC 3.A.1.14.2) 706 487 1819 190 O55:H7 str. CB9615 alignment trimmed tree collapsed 0.013 0.668
5284 210 Isochorismate synthase (EC 5.4.4.2) [enterobactin] siderophore 415 129 O111:H- str. 11128 alignment trimmed tree collapsed 0.004 0.370
5285 210 2,3-dihydroxybenzoate-AMP ligase (EC 2.7.7.58) [enterobactin] siderophore 3761 414 2468 264 MS 145-7 alignment trimmed tree collapsed 1.567 0.422
5286 210 Isochorismatase (EC 3.3.2.1) [enterobactin] siderophore / Apo-aryl carrier domain of EntB 413 136 1827-70 alignment trimmed tree collapsed 0.004 0.156
5287 210 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28) [enterobactin] siderophore 953 972 2348 2422 2567 2654 2739 2841 3212 3668 82 412 1200 1313 1489 1793 2014 4463 4594 4678 1659 55989 alignment trimmed tree collapsed 2.504 0.718
5288 210 Proofreading thioesterase in enterobactin biosynthesis EntH 3743 411 3560 266 O157:H7 str. EC4206 alignment trimmed tree collapsed 0.008 1.036
5289 210 Carbon starvation protein A 769 63 410 259 IAI1 alignment trimmed tree collapsed 0.516 1.231
5290 210 COG2879, Hypothetical small protein yjiX 767 61 409 265 str. K-12 substr. MG1655 alignment trimmed tree collapsed 0.000 0.698
5291 210 Glycerol dehydrogenase (EC 1.1.1.6) 1368 408 4286 237 55989 alignment trimmed tree collapsed 1.605 1.055
5292 210 Methionine aminotransferase, PLP-dependent 407 134 O111:H- str. 11128 alignment trimmed tree collapsed 0.010 0.139
5293 210 Methionine aminotransferase, PLP-dependent 407 143 str. K-12 substr. DH10B alignment trimmed tree collapsed 0.005 0.291
5294 210 Co-activator of prophage gene expression IbrB 406 158 O157:H7 str. EC4024 alignment trimmed tree collapsed 0.681 0.529
5295 210 Co-activator of prophage gene expression IbrA 1
5296 210 Putative LysR-family transcriptional regulator YbdO 5324 5637 404 1773 4708 354 IAI1 alignment trimmed tree collapsed 2.025 1.536
5297 210 Thiol:disulfide interchange protein DsbG precursor 403 132 MS 146-1 alignment trimmed tree collapsed 0.000 0.969
5298 210 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) 402 135 O157:H7 str. EC4206 alignment trimmed tree collapsed 0.000 0.086
5299 210 Alkyl hydroperoxide reductase protein F (EC 1.6.4.-) 401 133 S88 alignment trimmed tree collapsed 0.001 0.608
5300 210 Universal stress protein G 4112 400 1328 261 CFT073 alignment trimmed tree collapsed 0.000 0.753
5301 210 Uncharacterized zinc-type alcohol dehydrogenase-like protein ybdR 399 85 W alignment trimmed tree collapsed 0.008 0.835
5302 210 hypothetical protein 398 87 E22 alignment trimmed tree collapsed 0.000 0.350
5303 210 Regulator of nucleoside diphosphate kinase 397 134 B354 alignment trimmed tree collapsed 0.000 0.252
5304 210 Ribonuclease I precursor (EC 3.1.27.6) 396 134 IAI1 alignment trimmed tree collapsed 0.012 0.671
5305 210 Citrate Succinate antiporter (TC 2.A.47.3.2) 4982 395 4444 419 E110019 alignment trimmed tree collapsed 1.164 0.694
5306 210 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase (EC 2.7.8.25) 1
5307 210 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase (EC 2.7.7.61) 393 131 BW2952 alignment trimmed tree collapsed 0.006 0.751
5308 210 Citrate lyase alpha chain (EC 4.1.3.6) 392 135 MS 107-1 alignment trimmed tree collapsed 0.004 1.235
5309 210 Citrate lyase beta chain (EC 4.1.3.6) 391 135 55989 alignment trimmed tree collapsed 0.004 2.535
5310 210 Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6) 390 132 UM146 alignment trimmed tree collapsed 0.000 0.338
5311 210 [Citrate [pro-3S]-lyase] ligase (EC 6.2.1.22) 389 133 042 alignment trimmed tree collapsed 0.004 0.730
5312 210 FIG00639258: hypothetical protein 5 1827-70 alignment trimmed tree collapsed 0.041 0.709
5313 210 Sensor kinase CitA, DpiB (EC 2.7.3.-) 1171 3973 259 IAI1 alignment trimmed tree collapsed 1.556 1.225
5314 210 Transcriptional regulatory protein CitB, DpiA 1170 3972 4700 266 MS 69-1 alignment trimmed tree collapsed 0.000 0.403
5315 210 C4-dicarboxylate transporter DcuC (TC 2.A.61.1.1) 1811 4701 207 MS 21-1 alignment trimmed tree collapsed 1.350 0.760
5316 210 C4-dicarboxylate transporter DcuC (TC 2.A.61.1.1) 8 MS 182-1 alignment trimmed tree collapsed 0.000 0.378
5317 210 FIG00643597: hypothetical protein 14 MS 182-1 alignment trimmed tree collapsed 0.023 0.523
5318 210 Lipid A acylation protein PagP, palmitoyltransferase 4702 133 53638 alignment trimmed tree collapsed 0.000 0.327
5319 210 Cold shock protein CspE 1632 3902 4595 4597 4727 2178 3315 3316 3937 4574 4703 947 53638 alignment trimmed tree collapsed 1.254 0.930
5320 210 Protein crcB 4704 129 HS alignment trimmed tree collapsed 0.000 0.219
5321 210 Putative amidase 4705 116 O157:H7 str. EC4045 alignment trimmed tree collapsed 0.008 0.764
5322 210 Twin-arginine translocation protein TatE 1249 799 4706 268 F11 alignment trimmed tree collapsed 0.000 0.189
5323 210 Lipoate synthase 4707 129 str. K-12 substr. MG1655 alignment trimmed tree collapsed 0.000 0.203
5324 210 LysR-family transcriptional regulator YbeF 4708 99 55989 alignment trimmed tree collapsed 0.007 0.099
5325 210 Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase 4709 131 O157:H7 str. EC4076 alignment trimmed tree collapsed 0.000 0.486
5326 210 Proposed lipoate regulatory protein YbeD 4710 132 E24377A alignment trimmed tree collapsed 0.000 0.087
5327 210 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) 4711 11 MS 196-1 alignment trimmed tree collapsed 0.000 0.316
5328 210 hypothetical protein 4712 115 str. K-12 substr. DH10B alignment trimmed tree collapsed 0.050 2.345
5329 210 Rare lipoprotein A precursor 4713 124 O55:H7 str. CB9615 alignment trimmed tree collapsed 0.003 1.260
5330 210 Rod shape-determining protein RodA 4714 126 O157:H7 str. EC4042 alignment trimmed tree collapsed 0.000 0.094
5331 210 Penicillin-binding protein 2 (PBP-2) 5644 1766 4715 247 CFT073 alignment trimmed tree collapsed 0.000 1.044
5332 210 LSU m3Psi1915 methyltransferase RlmH ## ybeA 4716 133 H591 alignment trimmed tree collapsed 0.000 0.336
5333 210 Iojap protein 4717 121 1212A alignment trimmed tree collapsed 0.000 0.185
5334 210 Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73) 814 2031 4718 266 W alignment trimmed tree collapsed 1.756 0.079
5335 210 Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) ## bacterial NadD family 4719 132 CFT073 alignment trimmed tree collapsed 0.000 0.856
5336 210 DNA polymerase III delta subunit (EC 2.7.7.7) 4720 121 55989 alignment trimmed tree collapsed 0.007 0.255
5337 210 LPS-assembly lipoprotein RlpB precursor (Rare lipoprotein B) 4721 124 ED1a alignment trimmed tree collapsed 0.000 0.650
5338 210 Leucyl-tRNA synthetase (EC 6.1.1.4) 4722 126 KO11 alignment trimmed tree collapsed 0.002 1.208
5339 210 COG2433: Uncharacterized conserved protein 4723 134 MS 185-1 alignment trimmed tree collapsed 0.007 0.332
5340 210 hypothetical protein 4724 73 ATCC 8739 alignment trimmed tree collapsed 1.475 0.393
5341 210 FIG00641163: hypothetical protein 4725 17 MS 146-1 alignment trimmed tree collapsed 0.000 0.331
5342 210 FIG00637866: hypothetical protein 5345 279 4726 185 55989 alignment trimmed tree collapsed 0.710 0.080
5343 210 Putative enzyme of polynucleotide modification 5346 280 4727 156 SMS-3-5 alignment trimmed tree collapsed 0.874 0.805
5344 210 Uncharacterized protein YbeT 4728 91 B171 alignment trimmed tree collapsed 0.017 0.893
5345 210 Uncharacterized protein YbeU 5342 279 4726 185 MS 145-7 alignment trimmed tree collapsed 0.018 0.347
5346 210 FIG00638911: hypothetical protein 280 66 55989 alignment trimmed tree collapsed 0.028 0.197
5347 210 FIG00638982: hypothetical protein 26 KO11 alignment trimmed tree collapsed 0.022 1.866
5348 210 Chaperone protein hscC (Hsc62) 5570 281 2051 241 55989 alignment trimmed tree collapsed 0.012 0.577
5349 211 Cytosine permease 4131 153 CFT073 alignment trimmed tree collapsed 1.563 0.579
5350 211 Cytosine deaminase (EC 3.5.4.1) 4132 124 MS 115-1 alignment trimmed tree collapsed 0.000 0.741
5351 211 Cyn operon transcriptional activator 2736 2823 2965 3641 4278 5637 18 965 1333 1773 2190 2605 2876 3526 3962 4133 1392 O103:H2 str. 12009 alignment trimmed tree collapsed 2.646 1.385
5352 211 Carbonic anhydrase (EC 4.2.1.1) 4134 96 MS 196-1 alignment trimmed tree collapsed 0.005 0.529
5353 211 Cyanate hydratase (EC 4.2.1.104) 4135 100 str. K-12 substr. DH10B alignment trimmed tree collapsed 0.000 0.757
5354 211 Cyanate transport protein CynX 4136 111 O103:H2 str. 12009 alignment trimmed tree collapsed 1.894 0.456
5355 211 Galactoside O-acetyltransferase (EC 2.3.1.18) 1410 4137 245 55989 alignment trimmed tree collapsed 1.077 0.892
5356 211 Lactose permease 2775 3865 4138 210 CFT073 alignment trimmed tree collapsed 0.700 0.787
5357 211 Beta-galactosidase (EC 3.2.1.23) 2230 4456 227 55989 alignment trimmed tree collapsed 0.053 1.176
5358 211 Transcriptional repressor of the lac operon 1942 112 55989 alignment trimmed tree collapsed 0.009 0.140
5359 211 Mhp operon transcriptional activator 101 ED1a alignment trimmed tree collapsed 0.017 0.960
5360 211 3-(3-hydroxy-phenyl)propionate hydroxylase (EC 1.14.13.-) 4364 105 B str. REL606 alignment trimmed tree collapsed 0.014 0.652
5361 211 3-(3-hydroxy-phenyl)propionate hydroxylase (EC 1.14.13.-) 4364 106 HS alignment trimmed tree collapsed 0.010 0.255
5362 211 2,3-dihydroxyphenylpropionate 1,2-dioxygenase (EC 1.13.11.-) 4365 107 55989 alignment trimmed tree collapsed 0.007 0.414
5363 211 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase (EC 3.7.1.-) 4366 107 B str. REL606 alignment trimmed tree collapsed 0.000 0.228
5364 211 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase (EC 3.7.1.-) 4366 107 H736 alignment trimmed tree collapsed 0.000 0.217
5365 211 2-keto-4-pentenoate hydratase (EC 4.2.1.-) 4367 142 55989 alignment trimmed tree collapsed 0.008 0.610
5366 211 Acetaldehyde dehydrogenase, acetylating, (EC 1.2.1.10) in gene cluster for degradation of phenols, cresols, catechol 4368 105 B7A alignment trimmed tree collapsed 0.010 0.316
5367 211 4-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-) 4369 106 H736 alignment trimmed tree collapsed 0.000 0.689
5368 211 4-hydroxybenzoate transporter 1578 2681 3862 700 3823 4823 560 str. K-12 substr. DH10B alignment trimmed tree collapsed 2.347 1.086
5369 211 Nucleoprotein/polynucleotide-associated enzyme 4372 131 O157:H7 EDL933 alignment trimmed tree collapsed 0.006 0.485
5370 211 Transposase 2580 3418 4780 4816 249 O103:H2 str. 12009 alignment trimmed tree collapsed 0.000 0.262
5371 211 FIG00644023: hypothetical protein 17 H591 alignment trimmed tree collapsed 0.412 1.281
5372 211 S-formylglutathione hydrolase (EC 3.1.2.12) 3229 501 2256 266 E24377A alignment trimmed tree collapsed 0.763 0.593
5373 211 S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284) 1290 1494 2973 3842 3844 5480 213 290 670 2255 2613 3067 3795 855 MS 21-1 alignment trimmed tree collapsed 2.402 0.068
5374 211 Uncharacterized protein YaiN in in formaldehyde detoxification operon 3186 1520 2254 248 B171 alignment trimmed tree collapsed 0.000 1.033
5375 211 Putative uncharacterized protein YaiO 2253 110 O111:H- str. 11128 alignment trimmed tree collapsed 0.016 0.543
5376 211 Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24) 2252 107 SMS-3-5 alignment trimmed tree collapsed 0.040 0.821
5377 211 Glycosyltransferase (EC 2.4.1.-) 2251 102 EC4100B alignment trimmed tree collapsed 0.019 0.380
5378 211 hypothetical protein 2250 102 H591 alignment trimmed tree collapsed 0.534 0.551
5379 211 Taurine-binding periplasmic protein TauA 2708 129 K12 alignment trimmed tree collapsed 0.007 0.270
5380 211 Taurine transport ATP-binding protein TauB 3448 623 2709 293 H736 alignment trimmed tree collapsed 1.689 0.347
5381 211 Taurine transport system permease protein TauC 2710 127 55989 alignment trimmed tree collapsed 0.053 1.200
5382 211 Taurine transport system permease protein TauC 3087 4791 1803 2710 4759 400 O127:H6 str. E2348/69 alignment trimmed tree collapsed 0.000 0.897
5383 211 Alpha-ketoglutarate-dependent taurine dioxygenase (EC 1.14.11.17) 2711 125 55989 alignment trimmed tree collapsed 0.011 0.003
5384 211 Porphobilinogen synthase (EC 4.2.1.24) 2712 132 55989 alignment trimmed tree collapsed 0.000 0.532
5385 211 FIG00640177: hypothetical protein 34 EC4100B alignment trimmed tree collapsed 0.000 0.807
5386 211 Putative flagellin structural protein 3338 46 55989 alignment trimmed tree collapsed 0.306 1.865
5387 211 hypothetical protein 3339 126 536A alignment trimmed tree collapsed 0.005 0.119
5388 211 Penicillin-binding protein AmpH 3340 132 55989 alignment trimmed tree collapsed 0.013 1.415
5389 211 hypothetical protein 3341 103 55989 alignment trimmed tree collapsed 0.032 0.901
5390 211 SbmA protein 3342 125 ATCC 8739 alignment trimmed tree collapsed 0.013 1.258
5391 211 Putative outer membrane lipoprotein 3343 129 O157:H7 str. EC4206 alignment trimmed tree collapsed 0.003 1.023
5392 211 Putative inner membrane protein 3344 133 H299 alignment trimmed tree collapsed 0.000 0.115
5393 211 membrane protein yaiZ 3345 133 E2348/69 alignment trimmed tree collapsed 0.000 0.131
5394 211 D-alanine--D-alanine ligase (EC 6.3.2.4) 5653 1758 3346 264 E2348/69 alignment trimmed tree collapsed 0.000 0.711
5395 211 hypothetical protein 89 W alignment trimmed tree collapsed 0.016 0.006
5396 211 Cytoplasmic protein YaiB 1183 133 E24377A alignment trimmed tree collapsed 0.012 0.684
5397 212 Uncharacterized acetyltransferase YafP (EC 2.3.1.-) 1378 130 SE11 alignment trimmed tree collapsed 0.091 2.856
5398 212 Protein with similarity to RtcB 1377 80 MS 107-1 alignment trimmed tree collapsed 0.105 0.239
5399 212 Peptide chain release factor homolog 1376 76 55989 alignment trimmed tree collapsed 0.005 0.102
5400 212 Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3) 1375 132 55989 alignment trimmed tree collapsed 0.004 0.381
5401 212 Xanthine-guanine phosphoribosyltransferase (EC 2.4.2.22) 1374 134 1212A alignment trimmed tree collapsed 0.000 0.521
5402 212 hypothetical protein 1373 134 BL21(DE3) alignment trimmed tree collapsed 0.005 1.240
5403 212 Curlin genes transcriptional activator 1372 129 B str. REL606 alignment trimmed tree collapsed 0.000 0.872
5404 212 Outer membrane pore protein E precursor 3300 4782 4840 563 1371 1839 3089 613 55989 alignment trimmed tree collapsed 0.867 0.819
5405 212 Glutamate 5-kinase (EC 2.7.2.11) 1370 130 042 alignment trimmed tree collapsed 0.012 11.358
5406 212 Glutamate 5-kinase (EC 2.7.2.11) 1370 133 CFT073 alignment trimmed tree collapsed 0.000 0.176
5407 212 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 1369 132 UMN026 alignment trimmed tree collapsed 0.005 0.628
5408 212 Integrase 393 832 2500 3437 3509 1533 3044 3503 4073 657 55989 alignment trimmed tree collapsed 0.712 0.737
5409 212 FIG00644977: hypothetical protein 3043 4 55989 alignment trimmed tree 0.000 0.000
5410 212 FIG00641247: hypothetical protein 3042 91 55989 alignment trimmed tree collapsed 0.869 0.643
5411 212 AntA/AntB antirepressor domain protein 3041 23 55989 alignment trimmed tree collapsed 0.000 0.332
5412 212 FIG00643583: hypothetical protein 3040 3 E110019 alignment trimmed tree collapsed 0.000 0.707
5413 212 FIG00643232: hypothetical protein 3039 7 55989 alignment trimmed tree collapsed 0.000 0.832
5414 212 FIG00641726: hypothetical protein 3038 12 55989 alignment trimmed tree collapsed 0.000 1.338
5415 212 FIG00640024: hypothetical protein 3037 8 55989 alignment trimmed tree collapsed 0.000 1.000
5416 212 FIG00638501: hypothetical protein 3036 72 55989 alignment trimmed tree collapsed 0.893 2.173
5417 212 DNA primase (EC 2.7.7.-) 3035 17 55989 alignment trimmed tree collapsed 1.059 1.753
5418 212 Putative activator of ProP osmoprotectant transporter 3034 13 55989 alignment trimmed tree collapsed 0.238 1.211
5419 212 FIG00642905: hypothetical protein 2398 3033 4275 62 55989 alignment trimmed tree collapsed 2.248 1.397
5420 212 FIG00641350: hypothetical protein 3031 4 55989 alignment trimmed tree 0.000 0.000
5421 212 hypothetical protein 3030 2 alignment trimmed
5422 212 FIG00639944: hypothetical protein 3029 19 55989 alignment trimmed tree collapsed 0.563 0.699
5423 212 FIG00642644: hypothetical protein 3028 6 55989 alignment trimmed tree collapsed 0.026 1.786
5424 212 FIG00640437: hypothetical protein 3027 6 55989 alignment trimmed tree collapsed 0.000 0.707
5425 212 FIG00641246: hypothetical protein 6 55989 alignment trimmed tree collapsed 1.096 0.721
5426 212 putative ABC transporter ATP-binding protein 3026 4 55989 alignment trimmed tree collapsed 0.000 1.732
5427 212 putative ABC transporter ATP-binding protein 3026 7 55989 alignment trimmed tree collapsed 1.657 0.866
5428 212 Transcriptional regulator 251 46 O26:H11 str. 11368 alignment trimmed tree collapsed 0.000 0.284
5429 212 Hypothetical protein YagQ 250 87 55989 alignment trimmed tree collapsed 0.013 0.965
5430 212 Periplasmic aromatic aldehyde oxidoreductase, molybdenum binding subunit YagR 2528 2543 249 739 356 O157:H7 str. EC4042 alignment trimmed tree collapsed 0.008 0.287
5431 212 Periplasmic aromatic aldehyde oxidoreductase, molybdenum binding subunit YagR 2543 249 216 55989 alignment trimmed tree collapsed 0.019 1.151
5432 212 Periplasmic aromatic aldehyde oxidoreductase, FAD binding subunit YagS 2529 248 738 223 O26:H11 str. 11368 alignment trimmed tree collapsed 0.010 1.232
5433 212 Periplasmic aromatic aldehyde oxidoreductase, iron-sulfur subunit YagT 247 86 O157:H7 str. EC4486 alignment trimmed tree collapsed 0.000 1.217
5434 212 FIG00638929: hypothetical protein 246 24 55989 alignment trimmed tree collapsed 0.114 0.134
5435 212 DUF1440 domain-containing membrane protein 245 111 ETEC H10407 alignment trimmed tree collapsed 0.095 10.488
5436 212 DUF1440 domain-containing membrane protein 897 245 4861 131 536A alignment trimmed tree collapsed 0.009 0.253
5437 212 hypothetical protein 1
5438 212 Ferredoxin 63 KO11 alignment trimmed tree collapsed 0.086 1.229
5439 212 CFA/I fimbrial chaperone 3746 120 MS 198-1 alignment trimmed tree collapsed 0.000 1.170
5440 212 CFA/I fimbrial minor adhesin 3745 123 55989 alignment trimmed tree collapsed 0.013 0.074
5441 212 CFA/I fimbrial subunit C usher protein 3744 127 M718 alignment trimmed tree collapsed 0.000 0.104
5442 212 CFA/I fimbrial subunit C usher protein 2 TA143 alignment trimmed
5443 212 CFA/I fimbrial auxiliary subunit 3743 138 IAI1 alignment trimmed tree collapsed 0.027 0.346
5444 212 CFA/I fimbrial major subunit 3742 121 536A alignment trimmed tree collapsed 0.005 0.788
5445 212 FIGfam014588: Predicted regulator of CFA/I fimbriae 3741 217 H591 alignment trimmed tree collapsed 1.642 0.930
5446 212 LSU ribosomal protein L36p 3740 127 M605 alignment trimmed tree collapsed 0.000 0.126
5447 212 LSU ribosomal protein L31p 1353 3739 4014 294 55989 alignment trimmed tree collapsed 0.011 0.858
5448 212 Putative adhesin 3738 107 55989 alignment trimmed tree collapsed 0.037 0.512
5449 212 Transcriptional regulator YkgA 815 2032 3737 256 B088 alignment trimmed tree collapsed 2.647 0.243
5450 212 Putative inner membrane protein 3736 130 MS 145-7 alignment trimmed tree collapsed 0.011 0.305
5451 212 hypothetical protein 3735 128 ATCC 8739 alignment trimmed tree collapsed 0.024 0.964
5452 212 Putative Dihydrolipoamide dehydrogenase (EC 1.8.1.4); Mercuric ion reductase (EC 1.16.1.1); PF00070 family, FAD-dependent NAD(P)-disulphide oxidoreductase 142 995 5676 369 3086 3574 3734 424 MS 196-1 alignment trimmed tree collapsed 0.011 0.506
5453 212 Putative HTH-type transcriptional regulator ykgD 3733 128 B7A alignment trimmed tree collapsed 0.004 0.148
5454 212 Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE 3732 128 O111:H- str. 11128 alignment trimmed tree collapsed 0.013 0.162
5455 212 Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF 3731 129 EC4100B alignment trimmed tree collapsed 0.013 0.125
5456 212 Predicted L-lactate dehydrogenase, hypothetical protein subunit YkgG 3730 130 str. K-12 substr. MG1655 alignment trimmed tree collapsed 0.018 0.229
5457 212 hypothetical protein 3729 35 B171 alignment trimmed tree collapsed 0.104 0.670
5458 212 hypothetical protein 3728 76 55989 alignment trimmed tree collapsed 0.040 0.137
5459 212 Choline dehydrogenase (EC 1.1.99.1) 3727 128 KO11 alignment trimmed tree collapsed 0.041 0.643
5460 212 Betaine aldehyde dehydrogenase (EC 1.2.1.8) 1670 3069 4062 4123 4154 4186 382 2222 3276 3618 3644 3726 4846 803 F11 alignment trimmed tree collapsed 1.450 0.993
5461 212 HTH-type transcriptional regulator BetI 4690 3725 3761 255 HS alignment trimmed tree collapsed 1.512 0.640
5462 212 High-affinity choline uptake protein BetT 687 3724 4872 143 TA280 alignment trimmed tree collapsed 0.000 0.474
5463 212 Putative ATP-binding component of a transport system and adhesin protein 197 58 55989 alignment trimmed tree collapsed 0.018 0.291
5464 212 hypothetical protein 4236 2692 230 MS 119-7 alignment trimmed tree collapsed 1.920 1.035
5465 212 Putative HTH-type transcriptional regulator yahB 3590 1285 3951 4889 480 B185 alignment trimmed tree collapsed 2.172 0.302
5466 212 hypothetical protein 4347 201 2493 224 E22 alignment trimmed tree collapsed 1.561 1.031
5467 212 Putative transcription factor 202 138 E22 alignment trimmed tree collapsed 0.006 0.393
5468 212 FIG00637988: hypothetical protein 203 178 55989 alignment trimmed tree collapsed 2.259 0.824
5469 212 Putative oxidoreductase subunit 5223 204 1694 295 WV_060327 alignment trimmed tree collapsed 1.523 0.224
5470 212 Putative cytoplasmic protein 205 143 E110019 alignment trimmed tree collapsed 0.020 0.395
5471 212 Carbamate kinase (EC 2.7.2.2) 2536 5227 206 582 1697 459 B088 alignment trimmed tree collapsed 1.108 1.145
5472 212 Cytosine deaminase (EC 3.5.4.1) 207 128 55989 alignment trimmed tree collapsed 0.053 1.218
5473 212 Cytosine deaminase (EC 3.5.4.1) 207 128 55989 alignment trimmed tree collapsed 0.016 0.770
5474 212 unknown function 208 78 EC4100B alignment trimmed tree collapsed 0.000 0.512
5475 212 Putative sugar transport protein 209 80 APEC O1 alignment trimmed tree collapsed 0.003 0.790
5476 212 putative ATP binding protein of a transporter 1461 1645 3223 3263 3993 4265 4672 210 497 530 2530 2889 3778 1004 KO11 alignment trimmed tree collapsed 2.941 0.243
5477 212 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease component 2 1462 2974 3222 3992 4267 211 212 496 833 1855 2529 2614 2887 998 O157:H7 str. EC508 alignment trimmed tree collapsed 2.110 1.622
5478 212 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease component 1 1462 2974 3222 3992 4267 5477 211 212 496 1855 2529 2614 2887 887 B7A alignment trimmed tree collapsed 2.310 0.747
5479 212 COG1172: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 1462 3992 4267 212 1855 2529 2887 497 E24377A alignment trimmed tree collapsed 2.508 1.468
5480 212 Alcohol dehydrogenase (EC 1.1.1.1) 975 4223 5373 213 1203 2255 490 55989 alignment trimmed tree collapsed 1.820 1.229
5481 212 hypothetical protein 214 92 O157:H7 str. EC4206 alignment trimmed tree collapsed 0.009 1.087
5482 212 Threonine efflux protein 1236 3874 215 812 1339 382 MS 69-1 alignment trimmed tree collapsed 1.715 0.454
5483 212 FIG00639236: hypothetical protein 4916 216 1831 240 MS 119-7 alignment trimmed tree collapsed 0.011 0.888
5484 212 FIG00639203: hypothetical protein 217 99 B354 alignment trimmed tree collapsed 0.026 0.810
5485 212 Propionate catabolism operon regulatory protein PrpR 218 121 55989 alignment trimmed tree collapsed 0.008 0.258
5486 212 Methylisocitrate lyase (EC 4.1.3.30) 219 127 B7A alignment trimmed tree collapsed 0.014 0.496
5487 212 2-methylcitrate synthase (EC 2.3.3.5) 220 126 B171 alignment trimmed tree collapsed 0.000 0.558
5488 212 2-methylcitrate dehydratase (EC 4.2.1.79) 221 126 E22 alignment trimmed tree collapsed 0.009 0.715
5489 212 Propionate--CoA ligase (EC 6.2.1.17) 1115 222 2298 258 O157:H7 str. EC4196 alignment trimmed tree collapsed 0.001 0.702
5490 212 hypothetical protein 1
5491 212 Propionate--CoA ligase (EC 6.2.1.17) 222 156 O26:H11 str. 11368 alignment trimmed tree collapsed 0.009 0.498
5492 212 FIG00643378: hypothetical protein 4 H591 alignment trimmed tree collapsed 0.143 0.050
5493 213 Transcriptional regulator LysR family, yafC 994 1827 2153 2212 2705 3008 3875 4093 4749 618 766 1338 1427 2366 2646 3575 3803 4342 1524 55989 alignment trimmed tree collapsed 2.736 1.436
5494 213 conserved hypothetical protein 4343 133 O157:H7 str. EC4113 alignment trimmed tree collapsed 0.000 0.368
5495 213 SAM-dependent methyltransferase YafE (UbiE paralog) 4344 107 B088 alignment trimmed tree collapsed 0.026 1.336
5496 213 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) 4345 123 CFT073 alignment trimmed tree collapsed 0.000 0.624
5497 213 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) 4346 129 IAI1 alignment trimmed tree collapsed 0.009 0.267
5498 213 FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-) 4347 133 HS alignment trimmed tree collapsed 0.014 0.113
5499 213 Ribonuclease HI (EC 3.1.26.4) 4348 134 ATCC 8739 alignment trimmed tree collapsed 0.007 0.002
5500 213 DNA polymerase III epsilon subunit (EC 2.7.7.7) 4349 145 O111:H- str. 11128 alignment trimmed tree collapsed 0.009 0.303
5501 213 putative aminopeptidase 2024 101 IAI1 alignment trimmed tree collapsed 0.200 0.942
5502 213 hypothetical protein 2169 52 MS 146-1 alignment trimmed tree collapsed 0.162 6.892
5503 213 Secreted protein Hcp 5522 2170 4516 319 55989 alignment trimmed tree collapsed 2.344 0.306
5504 213 COG3515: Uncharacterized protein conserved in bacteria 2171 133 E24377A alignment trimmed tree collapsed 0.333 0.755
5505 213 IcmF-related protein 2172 52 55989 alignment trimmed tree collapsed 0.008 1.007
5506 213 Uncharacterized protein ImpA 4 042 alignment trimmed tree collapsed 0.295 1.732
5507 213 Type VI secretion protein VasI 2174 89 55989 alignment trimmed tree collapsed 0.095 1.356
5508 213 ClpB protein 2403 1017 102 55989 alignment trimmed tree collapsed 0.000 0.567
5509 213 Outer membrane protein ImpK/VasF, OmpA/MotB domain 1544 87 55989 alignment trimmed tree collapsed 0.034 0.463
5510 213 Uncharacterized protein ImpJ/VasE 2407 1545 1843 133 55989 alignment trimmed tree collapsed 2.516 0.727
5511 213 Type VI secretion lipoprotein/VasD 1546 88 W alignment trimmed tree collapsed 0.229 0.583
5512 213 Uncharacterized protein ImpI/VasC 1547 88 E110019 alignment trimmed tree collapsed 0.000 0.631
5513 213 Uncharacterized protein ImpH/VasB 1548 85 MS 84-1 alignment trimmed tree collapsed 0.003 0.586
5514 213 Protein ImpG/VasA 2413 1549 3138 130 55989 alignment trimmed tree collapsed 0.000 0.721
5515 213 Uncharacterized protein similar to VCA0109 1550 91 55989 alignment trimmed tree collapsed 0.007 0.568
5516 213 Uncharacterized protein ImpC 2415 1551 3140 131 O111:H- str. 11128 alignment trimmed tree collapsed 1.232 0.679
5517 213 Uncharacterized protein ImpC 1
5518 213 COG3517: Uncharacterized protein conserved in bacteria 1552 68 O157:H7 str. EC4401 alignment trimmed tree collapsed 0.013 0.201
5519 213 Uncharacterized protein ImpB 2263 2416 650 1553 138 MS 182-1 alignment trimmed tree collapsed 2.062 0.909
5520 213 FIG00639445: hypothetical protein 1554 9 E110019 alignment trimmed tree collapsed 0.024 0.707
5521 213 hypothetical protein 4517 66 MS 182-1 alignment trimmed tree collapsed 0.000 0.653
5522 213 Hcp 5503 2170 4516 226 E24377A alignment trimmed tree collapsed 2.220 0.294
5523 213 hypothetical protein 4515 64 MS 124-1 alignment trimmed tree collapsed 0.000 0.400
5524 213 VgrG protein 4200 139 55989 alignment trimmed tree collapsed 0.091 0.426
5525 213 core protein 5 55989 alignment trimmed tree collapsed 0.124 0.808
5526 213 core protein 66 SE11 alignment trimmed tree collapsed 0.075 1.173
5527 213 hypothetical protein 4803 63 55989 alignment trimmed tree collapsed 0.027 1.232
5528 213 Transposase 5249 4804 255 BL21(DE3) alignment trimmed tree collapsed 0.626 1.575
5529 213 Transposase 5249 5530 353 O157:H7 str. EC4501 alignment trimmed tree collapsed 0.580 2.858
5530 213 Transposase 5249 221 55989 alignment trimmed tree collapsed 0.041 0.310
5531 213 Possible hydrolase 4148 133 55989 alignment trimmed tree collapsed 0.013 0.920
5532 213 Inhibitor of vertebrate lysozyme precursor 4149 132 536 alignment trimmed tree collapsed 0.000 0.135
5533 213 Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2) 131 SE11 alignment trimmed tree collapsed 0.002 1.006
5534 213 acyl-CoA dehydrogenase 127 str. K-12 substr. MG1655 alignment trimmed tree collapsed 0.010 1.184
5535 213 Phosphoheptose isomerase 1 (EC 5.3.1.-) 1388 133 B171 alignment trimmed tree collapsed 0.000 0.217
5536 213 Predicted glutamine amidotransferase 1387 133 MS 182-1 alignment trimmed tree collapsed 0.000 0.922
5537 213 probable exported protein STY0357 1386 134 SE15 alignment trimmed tree collapsed 0.000 0.283
5538 213 YafQ toxin protein 1385 89 55989 alignment trimmed tree collapsed 0.102 1.846
5539 213 DNA-damage-inducible protein J 1384 91 MS 119-7 alignment trimmed tree collapsed 0.011 0.827
5540 213 hypothetical protein 39 ETEC H10407 alignment trimmed tree collapsed 0.000 0.344
5541 213 Hypothetical lipoprotein yafL precursor 1383 131 B185 alignment trimmed tree collapsed 0.005 1.099
5542 213 FIG00640507: hypothetical protein 2067 1382 1871 110 O111:H- str. 11128 alignment trimmed tree collapsed 1.035 1.423
5543 213 Flagellar biosynthesis protein FlhA 3972 332 1381 330 55989 alignment trimmed tree collapsed 1.212 0.414
5544 213 Flagellar motor rotation protein MotB 1380 131 CFT073 alignment trimmed tree collapsed 0.040 0.881
5545 213 Flagellar motor rotation protein MotB 1380 133 TA271 alignment trimmed tree collapsed 0.023 2.471
5546 213 DNA polymerase IV (EC 2.7.7.7) 1379 131 ETEC H10407 alignment trimmed tree collapsed 0.006 1.133
5547 214 hypothetical protein 2334 5371 37 EC4100B alignment trimmed tree collapsed 0.025 0.581
5548 214 Uncharacterized lipoprotein yaeF precursor 4796 132 TA143 alignment trimmed tree collapsed 0.053 0.225
5549 214 Uncharacterized lipoprotein yaeF precursor 4796 128 IAI1 alignment trimmed tree collapsed 0.100 1.288
5550 214 Prolyl-tRNA synthetase (EC 6.1.1.15) ## Bacterial type 4795 132 B088 alignment trimmed tree collapsed 0.006 0.207
5551 214 COG1720: Uncharacterized conserved protein 4794 131 M605 alignment trimmed tree collapsed 0.005 0.938
5552 214 Protein RcsF 4793 129 E24377A alignment trimmed tree collapsed 0.000 0.602
5553 214 Methionine ABC transporter substrate-binding protein 4792 135 B088 alignment trimmed tree collapsed 0.004 0.135
5554 214 Methionine ABC transporter permease protein 3388 3107 4791 268 B171 alignment trimmed tree collapsed 0.000 0.134
5555 214 Methionine ABC transporter ATP-binding protein 4790 131 NC101 alignment trimmed tree collapsed 0.000 0.511
5556 214 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase (EC 3.1.1.-) 124 ATCC 8739 alignment trimmed tree collapsed 0.006 0.967
5557 214 Methylglyoxal reductase, acetol producing (EC 1.1.1.-) / 2,5-diketo-D-gluconic acid reductase B (EC 1.1.1.274) 2730 960 2237 4341 713 O103:H2 str. 12009 alignment trimmed tree collapsed 2.384 0.827
5558 215 hypothetical protein 2 1827-70 alignment trimmed
5559 215 Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) 1361 2040 208 53638 alignment trimmed tree collapsed 1.445 1.337
5560 215 Homoserine kinase (EC 2.7.1.39) 2041 130 HS alignment trimmed tree collapsed 0.000 0.794
5561 215 Threonine synthase (EC 4.2.3.1) 2042 133 SE15 alignment trimmed tree collapsed 0.000 0.778
5562 215 FIG00638754: hypothetical protein 2043 44 SE15 alignment trimmed tree collapsed 0.000 0.543
5563 215 UPF0246 protein YaaA 2044 131 MS 107-1 alignment trimmed tree collapsed 0.013 0.706
5564 215 Putative alanine/glycine transport protein 2045 133 55989 alignment trimmed tree collapsed 0.009 1.348
5565 215 Transaldolase (EC 2.2.1.2) 2874 4408 172 ETEC H10407 alignment trimmed tree collapsed 0.006 1.782
5566 215 Molybdopterin biosynthesis Mog protein, molybdochelatase 2047 134 B str. REL606 alignment trimmed tree collapsed 0.005 0.159
5567 215 YaaH protein 2048 134 1125A alignment trimmed tree collapsed 0.006 0.610
5568 215 Putative oxidoreductase 2049 129 MS 116-1 alignment trimmed tree collapsed 0.018 0.077
5569 215 hypothetical protein 2050 134 W alignment trimmed tree collapsed 0.000 0.918
5570 215 Chaperone protein DnaK 2051 130 2362-75 alignment trimmed tree collapsed 0.000 0.256
5571 215 Chaperone protein DnaJ 2052 131 O111:H- str. 11128 alignment trimmed tree collapsed 0.000 0.595
5572 215 Gef protein interferes with membrane function when in excess 2053 370 MS 78-1 alignment trimmed tree collapsed 0.193 0.341
5573 215 Na+/H+ antiporter NhaA type 2210 127 ED1a alignment trimmed tree collapsed 0.000 0.881
5574 215 Transcriptional activator NhaR 2211 131 M718 alignment trimmed tree collapsed 0.004 0.239
5575 215 hypothetical protein 2212 38 MS 182-1 alignment trimmed tree collapsed 0.000 1.282
5576 215 Putative outer membrane protein 2193 3190 4256 4798 5238 5702 236 1516 1600 2213 3663 4743 4925 824 042 alignment trimmed tree collapsed 2.995 1.330
5577 215 unknown function 89 O103:H2 str. 12009 alignment trimmed tree collapsed 0.075 0.080
5578 215 unknown function 4 HS alignment trimmed tree collapsed 0.000 0.577
5579 215 SSU ribosomal protein S20p 2727 125 O157:H7 str. Sakai alignment trimmed tree collapsed 0.000 0.128
5580 215 Riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2) 2726 134 BW2952 alignment trimmed tree collapsed 0.004 0.653
5581 215 Isoleucyl-tRNA synthetase (EC 6.1.1.5) 129 DH1 alignment trimmed tree collapsed 0.010 0.933
5582 215 Lipoprotein signal peptidase (EC 3.4.23.36) 1
5583 215 FKBP-type peptidyl-prolyl cis-trans isomerase slpA (EC 5.2.1.8) 1915 4500 4579 265 SMS-3-5 alignment trimmed tree collapsed 1.497 1.432
5584 215 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2) 4580 131 MS 21-1 alignment trimmed tree collapsed 0.000 0.630
5585 215 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) 3239 5002 118 282 509 385 O26:H11 str. 11368 alignment trimmed tree collapsed 0.000 1.072
5586 215 Dihydrodipicolinate reductase (EC 1.3.1.26) 119 133 M605 alignment trimmed tree collapsed 0.064 9.055
5587 215 Dihydrodipicolinate reductase (EC 1.3.1.26) 119 133 EC4100B alignment trimmed tree collapsed 0.006 0.065
5588 215 hypothetical protein 1016 126 MS 182-1 alignment trimmed tree collapsed 0.021 1.209
5589 215 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 122 O111:H- str. 11128 alignment trimmed tree collapsed 0.000 0.756
5590 215 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) 128 MS 115-1 alignment trimmed tree collapsed 0.004 0.853
5591 215 orf; Unknown function 97 O26:H11 str. 11368 alignment trimmed tree collapsed 0.000 0.185
5592 215 Transcriptional activatory protein CaiF 1595 131 55989 alignment trimmed tree collapsed 0.008 0.533
5593 215 Carnitine operon protein CaiE 4142 1594 3628 194 TA271 alignment trimmed tree collapsed 0.006 0.724
5594 215 Carnitine racemase (EC 5.-.-.-) / Carnitinyl-CoA dehydratase (EC 4.2.1.-) 1593 120 H591 alignment trimmed tree collapsed 0.010 0.268
5595 215 Crotonobetaine carnitine-CoA ligase (EC 6.3.2.-) 1115 3761 2298 2468 371 MS 69-1 alignment trimmed tree collapsed 1.639 1.429
5596 215 Crotonobetainyl-CoA:carnitine CoA-transferase (EC 2.8.3.-) 1591 148 55989 alignment trimmed tree collapsed 0.003 0.401
5597 215 Crotonobetainyl-CoA dehydrogenase (EC 1.3.99.-) 1590 272 B171 alignment trimmed tree collapsed 0.000 0.276
5598 215 L-carnitine/gamma-butyrobetaine antiporter 687 3877 5462 1342 1589 3724 4872 355 KO11 alignment trimmed tree collapsed 2.560 0.865
5599 215 Electron transfer flavoprotein, beta subunit FixA 3757 1588 2472 263 E2348/69 alignment trimmed tree collapsed 0.703 0.108
5600 215 Electron transfer flavoprotein, alpha subunit FixB 3758 1587 2471 246 55989 alignment trimmed tree collapsed 0.007 0.874
5601 215 Probable electron transfer flavoprotein-quinone oxidoreductase FixC (EC 1.5.5.-) 2647 3759 1586 2470 4587 384 55989 alignment trimmed tree collapsed 0.610 0.633
5602 215 Ferredoxin-like protein FixX 3760 1585 2469 263 E22 alignment trimmed tree collapsed 0.540 0.820
5603 215 Putative metabolite transport protein yaaU 2652 3837 297 1584 4592 317 F11 alignment trimmed tree collapsed 2.050 0.857
5604 215 Glutathione-regulated potassium-efflux system ancillary protein KefF 1918 1583 4503 268 S88 alignment trimmed tree collapsed 1.603 0.265
5605 215 Glutathione-regulated potassium-efflux system protein KefC 1917 1582 4502 224 E24377A alignment trimmed tree collapsed 0.003 0.878
5606 215 Dihydrofolate reductase (EC 1.5.1.3) 1581 111 83972 alignment trimmed tree collapsed 0.000 0.624
5607 215 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41) 1580 134 H736 alignment trimmed tree collapsed 0.000 0.075
5608 215 ApaG protein 1579 104 SE11 alignment trimmed tree collapsed 0.000 0.172
5609 215 Dimethyladenosine transferase (EC 2.1.1.-) 1578 129 55989 alignment trimmed tree collapsed 0.008 1.046
5610 215 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) 1577 149 55989 alignment trimmed tree collapsed 1.207 0.467
5611 215 Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8) 1576 131 O157:H7 str. EC4045 alignment trimmed tree collapsed 0.000 0.365
5612 215 Outer membrane protein Imp, required for envelope biogenesis / Organic solvent tolerance protein precursor 1575 122 IAI1 alignment trimmed tree collapsed 0.001 0.512
5613 215 DnaJ-like protein DjlA 1574 127 TA143 alignment trimmed tree collapsed 0.005 0.932
5614 215 Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) 3022 1321 3820 4099 513 O157:H7 str. TW14588 alignment trimmed tree collapsed 1.589 1.771
5615 215 RNA polymerase associated protein RapA (EC 3.6.1.-) 1572 92 MS 146-1 alignment trimmed tree collapsed 0.000 0.636
5616 215 DNA polymerase II (EC 2.7.7.7) 1571 126 O103:H2 str. 12009 alignment trimmed tree collapsed 0.005 0.322
5617 215 L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) 896 1663 1570 2216 4862 364 53638 alignment trimmed tree collapsed 0.009 1.338
5618 215 L-arabinose isomerase (EC 5.3.1.4) 1569 130 55989 alignment trimmed tree collapsed 0.005 2.641
5619 215 L-arabinose isomerase (EC 5.3.1.4) 1569 131 MS 116-1 alignment trimmed tree collapsed 0.000 11.402
5620 215 Ribulokinase (EC 2.7.1.16) 1568 130 MS 45-1 alignment trimmed tree collapsed 0.016 0.895
5621 215 Arabinose operon regulatory protein 1567 131 O157:H7 str. TW14588 alignment trimmed tree collapsed 0.001 0.550
5622 215 DedA family inner membrane protein YabI 1566 132 MS 182-1 alignment trimmed tree collapsed 0.028 0.340
5623 215 DedA family inner membrane protein YabI 1566 124 WV_060327 alignment trimmed tree collapsed 0.549 10.269
5624 215 DedA family inner membrane protein YabI 1566 132 E22 alignment trimmed tree collapsed 0.007 1.122
5625 215 Thiamin ABC transporter, ATPase component / Thiamine transport ATP-binding protein thiQ 1150 1781 1787 1857 2037 2065 2183 2837 3086 3203 3448 3513 4082 4230 4453 4701 4710 4765 4919 5279 5555 5718 4 92 623 866 872 1438 1565 1710 1815 1834 1873 1900 2082 2517 2564 2698 2929 3292 3654 3838 3847 4472 4758 4790 3120 O103:H2 str. 12009 alignment trimmed tree collapsed 1.670 0.610
5626 215 Thiamin ABC transporter, transmembrane component 1564 129 MS 69-1 alignment trimmed tree collapsed 0.029 0.440
5627 215 Thiamin ABC transporter, substrate-binding component 1563 130 1827-70 alignment trimmed tree collapsed 0.007 0.346
5628 215 putative lipoprotein 1562 27 MS 119-7 alignment trimmed tree collapsed 0.026 0.431
5629 215 SgrR, sugar-phosphate stress, transcriptional activator of SgrS small RNA 1396 1561 265 MS 107-1 alignment trimmed tree collapsed 0.012 0.171
5630 215 conserved hypothetical protein 1560 89 DH1 alignment trimmed tree collapsed 0.159 0.796
5631 215 Putative transport protein 3 1827-70 alignment trimmed tree collapsed 0.012 0.707
5632 215 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) 1558 130 E24377A alignment trimmed tree collapsed 0.011 0.859
5633 215 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) 1557 130 MS 115-1 alignment trimmed tree collapsed 0.005 1.464
5634 215 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 3876 4465 1556 1699 366 BL21(DE3) alignment trimmed tree collapsed 1.958 1.247
5635 215 2-isopropylmalate synthase (EC 2.3.3.13) 1555 130 MS 185-1 alignment trimmed tree collapsed 0.000 0.170
5636 215 hypothetical protein 1774 46 MS 146-1 alignment trimmed tree collapsed 0.000 0.265
5637 215 Probable transcriptional activator for leuABCD operon 5296 404 1773 267 B088 alignment trimmed tree collapsed 2.116 0.299
5638 215 Acetolactate synthase large subunit (EC 2.2.1.6) 1387 1555 2788 677 1120 1772 2390 3854 649 E22 alignment trimmed tree collapsed 1.331 0.868
5639 215 Acetolactate synthase small subunit (EC 2.2.1.6) 1771 128 NC101 alignment trimmed tree collapsed 0.001 0.436
5640 215 Fructose repressor FruR, LacI family 2021 3714 1745 1770 1860 376 K12 alignment trimmed tree collapsed 0.000 0.308
5641 215 Cell division protein MraZ 1769 133 B088 alignment trimmed tree collapsed 0.000 0.358
5642 215 rRNA small subunit methyltransferase H 1768 134 APEC O1 alignment trimmed tree collapsed 0.000 0.310
5643 215 Cell division protein FtsL 1767 127 MS 182-1 alignment trimmed tree collapsed 0.000 0.158
5644 215 Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129) 5331 1766 4715 247 E24377A alignment trimmed tree collapsed 0.000 0.960
5645 215 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC 6.3.2.13) 1765 121 55989 alignment trimmed tree collapsed 0.017 0.318
5646 215 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) 1764 133 MS 78-1 alignment trimmed tree collapsed 0.009 0.979
5647 215 Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC 2.7.8.13) 1763 136 SMS-3-5 alignment trimmed tree collapsed 0.000 0.777
5648 215 UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC 6.3.2.9) 1762 135 E110019 alignment trimmed tree collapsed 0.007 0.149
5649 215 Cell division protein FtsW 1761 134 O157:H7 str. EC4115 alignment trimmed tree collapsed 0.000 11.533
5650 215 Cell division protein FtsW 1761 134 str. K-12 substr. DH10B alignment trimmed tree collapsed 0.000 0.129
5651 215 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) 1760 133 E24377A alignment trimmed tree collapsed 0.000 0.800
5652 215 UDP-N-acetylmuramate--alanine ligase (EC 6.3.2.8) 1759 134 O157:H7 str. EC4024 alignment trimmed tree collapsed 0.000 0.778
5653 215 D-alanine--D-alanine ligase (EC 6.3.2.4) 5394 1758 3346 265 55989 alignment trimmed tree collapsed 1.082 0.482
5654 215 Cell division protein FtsQ 1757 133 O26:H11 str. 11368 alignment trimmed tree collapsed 0.004 0.520
5655 215 Cell division protein FtsA 1756 129 O157:H7 str. EC4501 alignment trimmed tree collapsed 0.000 0.088
5656 215 Cell division protein FtsZ (EC 3.4.24.-) 1755 115 CFT073 alignment trimmed tree collapsed 0.000 0.159
5657 215 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC 3.5.1.-) 1754 118 UTI89 alignment trimmed tree collapsed 0.000 0.189
5658 215 Secretion monitor precursor 118 O26:H11 str. 11368 alignment trimmed tree collapsed 0.000 0.380
5659 215 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) 1752 119 KO11 alignment trimmed tree collapsed 0.000 0.173
5660 215 Protein export cytoplasm protein SecA ATPase RNA helicase (TC 3.A.5.1.1) 1752 114 KO11 alignment trimmed tree collapsed 0.004 1.759
5661 215 Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-) 2725 3826 307 1751 4783 393 M718 alignment trimmed tree collapsed 1.984 1.194
5662 215 FIG003276: zinc-binding protein 355 130 O26:H11 str. 11368 alignment trimmed tree collapsed 0.000 0.297
5663 215 FIG002842: hypothetical protein 356 131 MS 145-7 alignment trimmed tree collapsed 0.005 0.765
5664 215 Dephospho-CoA kinase (EC 2.7.1.24) 357 130 IAI39 alignment trimmed tree collapsed 0.005 0.550
5665 215 GMP reductase (EC 1.7.1.7) 358 128 1212A alignment trimmed tree collapsed 0.000 0.808
5666 215 Type IV fimbrial assembly protein PilC 359 209 E22 alignment trimmed tree collapsed 0.008 0.821
5667 215 Type IV fimbrial assembly, ATPase PilB 360 129 MS 84-1 alignment trimmed tree collapsed 0.022 0.387
5668 215 Type IV pilin PilA 361 131 H591 alignment trimmed tree collapsed 0.014 0.348
5669 215 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 362 134 H736 alignment trimmed tree collapsed 0.004 0.148
5670 215 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD 363 134 B str. REL606 alignment trimmed tree collapsed 0.000 0.496
5671 215 AmpE protein 364 130 E2348/69 alignment trimmed tree collapsed 0.008 0.098
5672 215 Aromatic amino acid transport protein AroP 907 1416 3071 4197 5264 365 1094 1822 1965 2327 3294 820 55989 alignment trimmed tree collapsed 1.640 1.106
5673 215 Transcriptional repressor for pyruvate dehydrogenase complex 1482 2253 366 3079 3678 3702 497 IAI39 alignment trimmed tree collapsed 0.000 1.144
5674 215 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) 367 129 MS 116-1 alignment trimmed tree collapsed 0.001 0.494
5675 215 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) 368 120 H299 alignment trimmed tree collapsed 0.002 0.053
5676 215 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 142 995 369 3086 3574 297 DH1 alignment trimmed tree collapsed 0.000 0.751
5677 215 Putative exported protein 370 119 B088 alignment trimmed tree collapsed 0.002 1.133
5678 215 Aconitate hydratase 2 (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99) 371 129 E22 alignment trimmed tree collapsed 0.000 0.659
5679 215 hypothetical protein 372 128 B7A alignment trimmed tree collapsed 0.000 0.436
5680 215 S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), prokaryotic class 1A 131 O55:H7 str. CB9615 alignment trimmed tree collapsed 0.008 0.557
5681 215 Spermidine synthase (EC 2.5.1.16) 374 134 SE15 alignment trimmed tree collapsed 0.011 1.789
5682 215 Predicted chaperone lipoprotein YacC, potentially involved in protein secretion 375 131 ATCC 8739 alignment trimmed tree collapsed 0.000 0.250
5683 215 Blue copper oxidase CueO precursor 2089 2361 376 2242 3588 270 55989 alignment trimmed tree collapsed 1.453 0.241
5684 215 Glucose dehydrogenase, PQQ-dependent (EC 1.1.5.2) 377 127 MS 21-1 alignment trimmed tree collapsed 0.004 0.129
5685 215 Hypoxanthine-guanine phosphoribosyltransferase (EC 2.4.2.8) 378 132 042 alignment trimmed tree collapsed 0.000 0.237
5686 215 Carbonic anhydrase (EC 4.2.1.1) 4910 132 042 alignment trimmed tree collapsed 0.005 0.809
5687 215 ABC-type multidrug transport system, ATPase component 1461 4265 2530 2889 4911 278 MS 84-1 alignment trimmed tree collapsed 2.293 0.312
5688 215 ABC-type multidrug transport system, permease component 4912 132 TA280 alignment trimmed tree collapsed 0.000 0.244
5689 215 Putative PTS system IIA component yadI (EC 2.7.1.69) 1716 3895 754 1359 4913 398 MS 182-1 alignment trimmed tree collapsed 1.506 0.149
5690 215 Polysaccharide deacetylase 4914 126 55989 alignment trimmed tree collapsed 0.024 0.789
5691 215 Polysaccharide deacetylase 4914 123 O157:H7 str. EC4206 alignment trimmed tree collapsed 0.020 0.415
5692 215 Aspartate 1-decarboxylase (EC 4.1.1.11) 4915 132 O157:H7 str. FRIK2000 alignment trimmed tree collapsed 0.000 0.239
5693 215 hypothetical protein 4916 70 MS 116-1 alignment trimmed tree collapsed 0.064 0.576
5694 215 hypothetical protein 378 755 1988 3325 3386 50 2422 2690 3105 4052 4917 614 W alignment trimmed tree collapsed 1.155 0.846
5695 215 Pantoate--beta-alanine ligase (EC 6.3.2.1) 4918 130 EC4100B alignment trimmed tree collapsed 0.000 0.732
5696 215 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) 4919 134 E22 alignment trimmed tree collapsed 0.000 0.137
5697 215 Fimbrial protein YadC 4920 83 HS alignment trimmed tree collapsed 0.000 0.746
5698 215 Fimbrial protein YadK 4921 116 W alignment trimmed tree collapsed 0.000 0.650
5699 215 Fimbrial protein YadL 4922 98 BL21(DE3) alignment trimmed tree collapsed 0.381 0.451
5700 215 predicted fimbrial-like adhesin protein 4923 122 MS 107-1 alignment trimmed tree collapsed 0.192 0.939
5701 215 FIG00638169: hypothetical protein 4924 43 SE11 alignment trimmed tree collapsed 0.000 0.513
5702 215 Outer membrane usher protein HtrE 3363 4925 293 55989 alignment trimmed tree collapsed 0.136 0.390
5703 215 Outer membrane usher protein HtrE 4925 111 MS 124-1 alignment trimmed tree collapsed 0.136 0.727
5704 215 Chaperone protein EcpD 1620 1726 2194 2198 3423 4257 4796 4802 5237 171 235 591 1601 2150 3364 3446 4211 4317 4744 4926 1378 B088 alignment trimmed tree collapsed 2.656 0.028
5705 215 hypothetical protein 42 OP50 alignment trimmed tree collapsed 0.000 0.444
5706 215 Fimbrial protein YadN 4933 1669 2127 208 HS alignment trimmed tree collapsed 2.724 0.929
5707 215 hypothetical protein 1
5708 215 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) 4028 132 E24377A alignment trimmed tree collapsed 0.000 1.107
5709 215 Poly(A) polymerase (EC 2.7.7.19) 4029 134 MS 119-7 alignment trimmed tree collapsed 0.007 0.391
5710 215 glutamyl-Q-tRNA synthetase 2815 4030 4418 257 MS 107-1 alignment trimmed tree collapsed 1.377 0.209
5711 215 C4-type zinc finger protein, DksA/TraR family 4031 133 042 alignment trimmed tree collapsed 0.000 0.126
5712 215 Sugar/maltose fermentation stimulation protein homolog 4032 133 B354 alignment trimmed tree collapsed 0.009 0.721
5713 215 2'-5' RNA ligase 4033 133 MS 175-1 alignment trimmed tree collapsed 0.018 1.152
5714 215 ATP-dependent helicase HrpB 4034 134 55989 alignment trimmed tree collapsed 0.029 0.074
5715 215 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) 2079 134 NC101 alignment trimmed tree collapsed 0.002 0.953
5716 215 hypothetical protein 2080 127 O127:H6 str. E2348/69 alignment trimmed tree collapsed 0.023 0.413
5717 215 Ferric hydroxamate outer membrane receptor FhuA 4427 4914 1304 2081 331 ATCC 8739 alignment trimmed tree collapsed 1.977 0.327
5718 215 Ferric hydroxamate ABC transporter (TC 3.A.1.14.3), ATP-binding protein FhuC 1787 3771 872 2082 2460 629 CFT073 alignment trimmed tree collapsed 1.679 1.258
5719 215 Ferric hydroxamate ABC transporter (TC 3.A.1.14.3), periplasmic substrate binding protein FhuD 2083 128 O103:H2 str. 12009 alignment trimmed tree collapsed 0.004 0.484
5720 215 Ferric hydroxamate ABC transporter (TC 3.A.1.14.3), permease component FhuB 2084 129 B171 alignment trimmed tree collapsed 0.007 0.012
5721 215 Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) 2085 175 E22 alignment trimmed tree collapsed 0.000 0.571
5722 215 H(+)/Cl(-) exchange transporter ClcA 2086 131 HS alignment trimmed tree collapsed 0.000 0.621
5723 215 probable iron binding protein from the HesB_IscA_SufA family 2956 3741 2087 2596 3879 380 CFT073 alignment trimmed tree collapsed 1.815 1.054
5724 215 Putative inner membrane protein 2088 131 APEC O1 alignment trimmed tree collapsed 0.000 0.160
5725 215 Vitamin B12 ABC transporter, B12-binding component BtuF 2089 132 042 alignment trimmed tree collapsed 0.000 0.826
5726 215 5'-methylthioadenosine nucleosidase (EC 3.2.2.16) / S-adenosylhomocysteine nucleosidase (EC 3.2.2.9) 801 1948 2090 268 TA280 alignment trimmed tree collapsed 0.000 0.540
5727 215 Deoxyguanosinetriphosphate triphosphohydrolase (EC 3.1.5.1) 2091 137 E22 alignment trimmed tree collapsed 0.007 0.270
5728 215 HtrA protease/chaperone protein 1818 901 2092 255 1827-70 alignment trimmed tree collapsed 0.549 1.200
5729 215 Sugar diacid utilization regulator SdaR 2093 133 B088 alignment trimmed tree collapsed 0.003 0.888
5730 215 UPF0325 protein yaeH 2094 134 O157:H7 str. EC869 alignment trimmed tree collapsed 0.000 0.216
5731 215 FIG00639634: hypothetical protein 2095 24 EC4100B alignment trimmed tree collapsed 0.000 1.414
5732 215 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) 2096 133 HS alignment trimmed tree collapsed 0.000 0.747
5733 215 [Protein-PII] uridylyltransferase (EC 2.7.7.59) 131 55989 alignment trimmed tree collapsed 0.000 1.460
5734 215 Methionine aminopeptidase (EC 3.4.11.18) 2429 2691 4877 263 1125A alignment trimmed tree collapsed 1.722 0.214
5735 215 SSU ribosomal protein S2p (SAe) 132 MS 119-7 alignment trimmed tree collapsed 0.004 1.632
5736 215 hypothetical protein 462 101 53638 alignment trimmed tree collapsed 0.000 0.293
5737 215 Translation elongation factor Ts 463 132 MS 185-1 alignment trimmed tree collapsed 0.000 0.198
5738 215 Uridylate kinase (EC 2.7.4.-) 4113 132 IAI39 alignment trimmed tree collapsed 0.004 0.152
5739 215 Ribosome recycling factor 4112 133 HS alignment trimmed tree 0.000 0.000
5740 215 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267) 1
5741 215 Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31) 4110 133 MS 45-1 alignment trimmed tree collapsed 0.000 0.253
5742 215 hypothetical protein 4109 105 BL21 alignment trimmed tree collapsed 0.039 0.432
5743 215 Phosphatidate cytidylyltransferase (EC 2.7.7.41) 4108 131 BL21 alignment trimmed tree collapsed 0.000 0.604
5744 215 Membrane-associated zinc metalloprotease 1
5745 215 Outer membrane protein assembly factor YaeT precursor 123 E110019 alignment trimmed tree collapsed 0.000 0.189
5746 215 Outer membrane protein H precursor 174 127 B354 alignment trimmed tree collapsed 0.000 0.126
5747 215 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.-) 175 131 IAI1 alignment trimmed tree collapsed 0.000 0.164
5748 215 (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase (EC 4.2.1.-) 176 130 CFT073 alignment trimmed tree collapsed 0.000 0.282
5749 215 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129) 177 134 MS 69-1 alignment trimmed tree collapsed 0.000 0.525
5750 215 Lipid-A-disaccharide synthase (EC 2.4.1.182) 178 131 H591 alignment trimmed tree collapsed 0.003 1.075
5751 215 Ribonuclease HII (EC 3.1.26.4) 179 133 K12 alignment trimmed tree collapsed 0.000 0.541
5752 215 DNA polymerase III alpha subunit (EC 2.7.7.7) 180 122 TA271 alignment trimmed tree collapsed 0.003 0.870
5753 215 Acetyl-coenzyme A carboxyl transferase alpha chain (EC 6.4.1.2) 181 134 SE15 alignment trimmed tree collapsed 0.004 0.753
5754 215 Lysine decarboxylase 2, constitutive (EC 4.1.1.18) 1163 1180 182 783 437 53638 alignment trimmed tree collapsed 0.008 0.521
5755 215 Hypothetical protein YaeR with similarity to glyoxylase family 183 134 O157:H7 str. EC4042 alignment trimmed tree collapsed 0.009 0.727
5756 215 tRNA(Ile)-lysidine synthetase 184 133 MS 145-7 alignment trimmed tree collapsed 0.019 0.633
5757 215 tRNA(Ile)-lysidine synthetase 184 133 B354 alignment trimmed tree collapsed 0.055 0.704
5758 215 Rho-specific inhibitor of transcription termination (YaeO) 185 127 55989 alignment trimmed tree collapsed 0.012 0.559
5759 215 hypothetical protein 186 131 E2348/69 alignment trimmed tree collapsed 0.000 0.508
5760 215 YaeQ protein 1
5761 215 Hypothetical protein YaeJ with similarity to translation release factor 188 133 S88 alignment trimmed tree collapsed 0.000 0.928
5762 215 Copper homeostasis protein CutF precursor / Lipoprotein NlpE involeved in surface adhesion 189 134 MS 107-1 alignment trimmed tree collapsed 0.007 0.944
5763 215 Copper homeostasis protein CutF precursor / Lipoprotein NlpE involeved in surface adhesion 189 134 B171 alignment trimmed tree collapsed 0.064 0.016
5764 215 hypothetical protein 5492 7 TA271 alignment trimmed tree collapsed 0.031 0.816

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